NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|755526951|ref|XP_011246724|]
View 

adhesion G-protein coupled receptor G5 isoform X1 [Mus musculus]

Protein Classification

adhesion G protein-coupled receptor( domain architecture ID 12027419)

adhesion G protein-coupled receptor (GPCR) is involved in cell adhesion and cell-cell interactions; GPCRs transmit physiological signals from the outside of the cell to the inside via G proteins by binding to an extracellular agonist, which induces conformational changes that lead to the activation of heterotrimeric G proteins, which then bind to and activate numerous downstream effector proteins

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
7tm_GPCRs super family cl28897
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
241-513 4.92e-128

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


The actual alignment was detected with superfamily member cd15443:

Pssm-ID: 475119 [Multi-domain]  Cd Length: 268  Bit Score: 374.09  E-value: 4.92e-128
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 241 VPLEYISFVGCSISIVASLLTILLYAQSRKQS-DSTTRIHMNLNGSVLLLNVTFLLSSQMTLPTMPRpVCKVLAAVLHYA 319
Cdd:cd15443    2 EPLTYISIVGCSISAAASLLTILLHFFSRKQPkDSTTRIHMNLLGSLFLLNGSFLLSPPLATSQSTW-LCRAAAALLHYS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 320 LLSSLTWMAIEGFNLYLFLGRVYNAYIRRYLLKLCMLGWGFPALLVLLLLMIKSSVYGPCVTSLsksqenGTGFQNVSMC 399
Cdd:cd15443   81 LLCCLTWMAIEGFHLYLLLVKVYNIYIRRYVLKLCVLGWGLPALIVLLVLIFKREAYGPHTIPT------GTGYQNASMC 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 400 WIRSPMVHSILVMGYGGFTSLFNLVVLAWALWILCRLRAREKALSPWAYRDTAMVLGLTVLLGTTWTLAFFSFGVFLLPQ 479
Cdd:cd15443  155 WITSSKVHYVLVLGYAGLTSLFNLVVLAWVVRMLRRLRSRKQELGERARRDWVTVLGLTCLLGTTWALAFFSFGVFLIPQ 234
                        250       260       270
                 ....*....|....*....|....*....|....
gi 755526951 480 LFLFTIFNSLYGFFLFLWFCSQKRYSDAEAKAEM 513
Cdd:cd15443  235 LFLFTIINSLYGFFICLWYCTQRRRSDASAKSST 268
GPS pfam01825
GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for ...
183-228 2.11e-15

GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for auto-proteolysis, so is thus named, GPS. The GPS motif is a conserved sequence of ~40 amino acids containing canonical cysteine and tryptophan residues, and is the most highly conserved part of the domain. In most, if not all, cell-adhesion GPCRs these undergo autoproteolysis in the GPS between a conserved aliphatic residue (usually a leucine) and a threonine, serine, or cysteine residue. In higher eukaryotes this motif is found embedded in the C-terminal beta-stranded part of a GAIN domain - GPCR-Autoproteolysis INducing (GAIN). The GAIN-GPS domain adopts a fold in which the GPS motif, at the C-terminus, forms five beta-strands that are tightly integrated into the overall GAIN domain. The GPS motif, evolutionarily conserved from tetrahymena to mammals, is the only extracellular domain shared by all human cell-adhesion GPCRs and PKD proteins, and is the locus of multiple human disease mutations. The GAIN-GPS domain is both necessary and sufficient functionally for autoproteolysis, suggesting an autoproteolytic mechanism whereby the overall GAIN domain fine-tunes the chemical environment in the GPS to catalyze peptide bond hydrolysis. In the cell-adhesion GPCRs and PKD proteins, the GPS motif is always located at the end of their long N-terminal extracellular regions, immediately before the first transmembrane helix of the respective protein.


:

Pssm-ID: 460350  Cd Length: 44  Bit Score: 70.03  E-value: 2.11e-15
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 755526951  183 VSCVFWKEGASksSWGAWSPEGCYTEQPSATQVLCHCNHLTYFAVL 228
Cdd:pfam01825   1 PQCVFWDFTNS--TTGRWSTEGCTTVSLNDTHTVCSCNHLTSFAVL 44
 
Name Accession Description Interval E-value
7tmB2_GPR114 cd15443
orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G ...
241-513 4.92e-128

orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR114 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include GPR56, GPR64, GPR97, GPR112, and GPR126. GPR114 is mainly found in granulocytes (polymorphonuclear leukocytes), and GPR114-transfected cells induced an increase in cAMP levels via coupling to G(s) protein. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320559 [Multi-domain]  Cd Length: 268  Bit Score: 374.09  E-value: 4.92e-128
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 241 VPLEYISFVGCSISIVASLLTILLYAQSRKQS-DSTTRIHMNLNGSVLLLNVTFLLSSQMTLPTMPRpVCKVLAAVLHYA 319
Cdd:cd15443    2 EPLTYISIVGCSISAAASLLTILLHFFSRKQPkDSTTRIHMNLLGSLFLLNGSFLLSPPLATSQSTW-LCRAAAALLHYS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 320 LLSSLTWMAIEGFNLYLFLGRVYNAYIRRYLLKLCMLGWGFPALLVLLLLMIKSSVYGPCVTSLsksqenGTGFQNVSMC 399
Cdd:cd15443   81 LLCCLTWMAIEGFHLYLLLVKVYNIYIRRYVLKLCVLGWGLPALIVLLVLIFKREAYGPHTIPT------GTGYQNASMC 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 400 WIRSPMVHSILVMGYGGFTSLFNLVVLAWALWILCRLRAREKALSPWAYRDTAMVLGLTVLLGTTWTLAFFSFGVFLLPQ 479
Cdd:cd15443  155 WITSSKVHYVLVLGYAGLTSLFNLVVLAWVVRMLRRLRSRKQELGERARRDWVTVLGLTCLLGTTWALAFFSFGVFLIPQ 234
                        250       260       270
                 ....*....|....*....|....*....|....
gi 755526951 480 LFLFTIFNSLYGFFLFLWFCSQKRYSDAEAKAEM 513
Cdd:cd15443  235 LFLFTIINSLYGFFICLWYCTQRRRSDASAKSST 268
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
242-494 1.37e-30

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 119.31  E-value: 1.37e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951  242 PLEYISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFL-----LSSQMTLPTMPRPVCKVLAAVL 316
Cdd:pfam00002   3 SLKVIYTVGYSLSLVALLLAIAIFLLFRKLHCTRNYIHLNLFASFILRALLFLvgdavLFNKQDLDHCSWVGCKVVAVFL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951  317 HYALLSSLTWMAIEGFNLYLFLGRVYNAYiRRYLLKLCMLGWGFPALlvllllmikssVYGPCVTSLSKsqengtGFQNV 396
Cdd:pfam00002  83 HYFFLANFFWMLVEGLYLYTLLVEVFFSE-RKYFWWYLLIGWGVPAL-----------VVGIWAGVDPK------GYGED 144
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951  397 SMCWIRSPMVHSILVMGYGGFTSLFNLVVLAWALWILC-RLRAREKALS--PWAYRDTAMVLGLTVLLGTTWTLAFFSFG 473
Cdd:pfam00002 145 DGCWLSNENGLWWIIRGPILLIILVNFIIFINIVRILVqKLRETNMGKSdlKQYRRLAKSTLLLLPLLGITWVFGLFAFN 224
                         250       260
                  ....*....|....*....|....
gi 755526951  474 ---VFLLPQLFLFTIFNSLYGFFL 494
Cdd:pfam00002 225 penTLRVVFLYLFLILNSFQGFFV 248
GPS pfam01825
GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for ...
183-228 2.11e-15

GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for auto-proteolysis, so is thus named, GPS. The GPS motif is a conserved sequence of ~40 amino acids containing canonical cysteine and tryptophan residues, and is the most highly conserved part of the domain. In most, if not all, cell-adhesion GPCRs these undergo autoproteolysis in the GPS between a conserved aliphatic residue (usually a leucine) and a threonine, serine, or cysteine residue. In higher eukaryotes this motif is found embedded in the C-terminal beta-stranded part of a GAIN domain - GPCR-Autoproteolysis INducing (GAIN). The GAIN-GPS domain adopts a fold in which the GPS motif, at the C-terminus, forms five beta-strands that are tightly integrated into the overall GAIN domain. The GPS motif, evolutionarily conserved from tetrahymena to mammals, is the only extracellular domain shared by all human cell-adhesion GPCRs and PKD proteins, and is the locus of multiple human disease mutations. The GAIN-GPS domain is both necessary and sufficient functionally for autoproteolysis, suggesting an autoproteolytic mechanism whereby the overall GAIN domain fine-tunes the chemical environment in the GPS to catalyze peptide bond hydrolysis. In the cell-adhesion GPCRs and PKD proteins, the GPS motif is always located at the end of their long N-terminal extracellular regions, immediately before the first transmembrane helix of the respective protein.


Pssm-ID: 460350  Cd Length: 44  Bit Score: 70.03  E-value: 2.11e-15
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 755526951  183 VSCVFWKEGASksSWGAWSPEGCYTEQPSATQVLCHCNHLTYFAVL 228
Cdd:pfam01825   1 PQCVFWDFTNS--TTGRWSTEGCTTVSLNDTHTVCSCNHLTSFAVL 44
GPS smart00303
G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin ...
181-229 1.25e-10

G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin REJ and polycystin.


Pssm-ID: 197639  Cd Length: 49  Bit Score: 56.63  E-value: 1.25e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 755526951   181 YTVSCVFWKEGAsksswGAWSPEGCYTEQPSATQVLCHCNHLTYFAVLM 229
Cdd:smart00303   1 FNPICVFWDESS-----GEWSTRGCELLETNGTHTTCSCNHLTTFAVLM 44
 
Name Accession Description Interval E-value
7tmB2_GPR114 cd15443
orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G ...
241-513 4.92e-128

orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR114 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include GPR56, GPR64, GPR97, GPR112, and GPR126. GPR114 is mainly found in granulocytes (polymorphonuclear leukocytes), and GPR114-transfected cells induced an increase in cAMP levels via coupling to G(s) protein. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320559 [Multi-domain]  Cd Length: 268  Bit Score: 374.09  E-value: 4.92e-128
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 241 VPLEYISFVGCSISIVASLLTILLYAQSRKQS-DSTTRIHMNLNGSVLLLNVTFLLSSQMTLPTMPRpVCKVLAAVLHYA 319
Cdd:cd15443    2 EPLTYISIVGCSISAAASLLTILLHFFSRKQPkDSTTRIHMNLLGSLFLLNGSFLLSPPLATSQSTW-LCRAAAALLHYS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 320 LLSSLTWMAIEGFNLYLFLGRVYNAYIRRYLLKLCMLGWGFPALLVLLLLMIKSSVYGPCVTSLsksqenGTGFQNVSMC 399
Cdd:cd15443   81 LLCCLTWMAIEGFHLYLLLVKVYNIYIRRYVLKLCVLGWGLPALIVLLVLIFKREAYGPHTIPT------GTGYQNASMC 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 400 WIRSPMVHSILVMGYGGFTSLFNLVVLAWALWILCRLRAREKALSPWAYRDTAMVLGLTVLLGTTWTLAFFSFGVFLLPQ 479
Cdd:cd15443  155 WITSSKVHYVLVLGYAGLTSLFNLVVLAWVVRMLRRLRSRKQELGERARRDWVTVLGLTCLLGTTWALAFFSFGVFLIPQ 234
                        250       260       270
                 ....*....|....*....|....*....|....
gi 755526951 480 LFLFTIFNSLYGFFLFLWFCSQKRYSDAEAKAEM 513
Cdd:cd15443  235 LFLFTIINSLYGFFICLWYCTQRRRSDASAKSST 268
7tmB2_GPR126-like_Adhesion_VIII cd15258
orphan GPR126 and related proteins, group VIII adhesion GPCRs, member of the class B2 family ...
242-511 1.37e-100

orphan GPR126 and related proteins, group VIII adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Group VIII adhesion GPCRs include orphan GPCRs such as GPR56, GPR64, GPR97, GPR112, GPR114, and GPR126. GPR56 is involved in the regulation of oligodendrocyte development and myelination in the central nervous system via coupling to G(12/13) proteins, which leads to the activation of RhoA GTPase. GPR126, on the other hand, is required for Schwann cells, but not oligodendrocyte myelination in the peripheral nervous system. Gpr64 is mainly expressed in the epididymis of male reproductive tract, and targeted deletion of GPR64 causes sperm stasis and efferent duct blockage due to abnormal fluid reabsorption, resulting in male infertility. GPR64 is also over-expressed in Ewing's sarcoma (ES), as well as upregulated in other carcinomas from kidney, prostate or lung, and promotes invasiveness and metastasis in ES via the upregulation of placental growth factor (PGF) and matrix metalloproteinase (MMP) 1. GPR97 is identified as a lymphatic adhesion receptor that is specifically expressed in lymphatic endothelium, but not in blood vascular endothelium, and is shown to regulate migration of lymphatic endothelial cells via the small GTPases RhoA and cdc42. GPR112 is specifically expressed in normal enterochromatin cells and gastrointestinal neuroendocrine carcinoma cells, but its biological function is unknown. GPR114 is mainly found in granulocytes (polymorphonuclear leukocytes), and GPR114-transfected cells induced an increase in cAMP levels via coupling to G(s) protein. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320386 [Multi-domain]  Cd Length: 267  Bit Score: 303.95  E-value: 1.37e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 242 PLEYISFVGCSISIVASLLTILLYAQSRKQS-DSTTRIHMNLNGSVLLLNVTFLLSSQMTLpTMPRPVCKVLAAVLHYAL 320
Cdd:cd15258    3 ILTFISYVGCGISAIFLAITILTYIAFRKLRrDYPSKIHMNLCAALLLLNLAFLLSSWIAS-FGSDGLCIAVAVALHYFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 321 LSSLTWMAIEGFNLYLFLGRVYNAYIRRYLLKLCMLGWGFPALLVLLLLMIKSSVYGPCvtslskSQENGTGFQNVSMCW 400
Cdd:cd15258   82 LACLTWMGLEAFHLYLLLVKVFNTYIRRYILKLCLVGWGLPALLVTLVLSVRSDNYGPI------TIPNGEGFQNDSFCW 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 401 IRSPMVHSILVMGYGGFTSLFNLVVLAWALWILCRLR-AREKALSPWAYRDTAMVLGLTVLLGTTWTLAFFSFGVFLLPQ 479
Cdd:cd15258  156 IRDPVVFYITVVGYFGLTFLFNMVMLATVLVQICRLReKAQATPRKRALHDLLTLLGLTFLLGLTWGLAFFAWGPFNLPF 235
                        250       260       270
                 ....*....|....*....|....*....|..
gi 755526951 480 LFLFTIFNSLYGFFLFLWFCSQKRYSDAEAKA 511
Cdd:cd15258  236 LYLFAIFNSLQGFFIFIWYCSMKENVRKQWRA 267
7tmB2_GPR56 cd15995
orphan adhesion receptor GPR56, member of the class B2 family of seven-transmembrane G ...
243-500 3.58e-59

orphan adhesion receptor GPR56, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR56 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR64, GPR97, GPR112, GPR114, and GPR126. GPR56 is involved in the regulation of oligodendrocyte development and myelination in the central nervous system via coupling to G(12/13) proteins, which leads to the activation of RhoA GTPase. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320661  Cd Length: 269  Bit Score: 196.97  E-value: 3.58e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 243 LEYISFVGCSISIVASLLTILLYAQSR-KQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTlPTMPRPVCKVLAAVLHYALL 321
Cdd:cd15995    4 LTILTYVGCIISALASVFTIAFYLCSRrKPRDYTIYVHMNLLLAIFLLDTSFLISEPLA-LTGSEAACRAGGMFLHFSLL 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 322 SSLTWMAIEGFNLYLFLGRVYNAYIRRYLLKLCMLGWGFPALLVLLLLMIKSSVYGPCVTSLSKSQEngtGFQNVSMCWI 401
Cdd:cd15995   83 ACLTWMGIEGYNLYRLVVEVFNTYVPHFLLKLCAVGWGLPIFLVTLIFLVDQDNYGPIILAVHRSPE---KVTYATICWI 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 402 RSPMVHSILVMGYGGFTSLFNLVVLAWALWILCRLRAREKAlspWAYrdTAMVLGLTVLLGTTWTLAFFSF--GVFLLPQ 479
Cdd:cd15995  160 TDSLISNITNLGLFSLVFLFNMAMLATMVVEILRLRPRTHK---WSH--VLTLLGLSLVLGIPWALAFFSFasGTFQLVI 234
                        250       260
                 ....*....|....*....|.
gi 755526951 480 LFLFTIFNSLYGFFLFLWFCS 500
Cdd:cd15995  235 VYLFTIINSLQGFLIFLWYWS 255
7tmB2_GPR97 cd15442
orphan adhesion receptor GPR97, member of the class B2 family of seven-transmembrane G ...
246-498 2.56e-58

orphan adhesion receptor GPR97, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR97 is an orphan receptor that has been classified into the group VIII of adhesion GPCRs. Other members of the Group VII include GPR56, GPR64, GPR112, GPR114, and GPR126. GPR97 is identified as a lymphatic adhesion receptor that is specifically expressed in lymphatic endothelium, but not in blood vascular endothelium, and is shown to regulate migration of lymphatic endothelial cells via the small GTPases RhoA and cdc42. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320558 [Multi-domain]  Cd Length: 277  Bit Score: 195.02  E-value: 2.56e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 246 ISFVGCSISIVASLLTILLYAQ---SRKQ--SDSTTRIHMNLNGSVLLLNVTFLLSSQMTLPTMPrPVCKVLAAVLHYAL 320
Cdd:cd15442    7 ISSAGCGVSMVFLIFTIILYFFlrfTYQKfkSEDAPKIHVNLSSSLLLLNLAFLLNSGVSSRAHP-GLCKALGGVTHYFL 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 321 LSSLTWMAIEGFNLYLFLGRVYNAYIRRYLLKLCMLGWGFPALLVLLLLMIKSsvYGPCVTslsKSQENGTgfqNVSMCW 400
Cdd:cd15442   86 LCCFTWMAIEAFHLYLLAIKVFNTYIHHYFAKLCLVGWGFPALVVTITGSINS--YGAYTI---MDMANRT---TLHLCW 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 401 IRSP--MVHSILVMGYGGFTSLFNLVVLAWALWILCRL-RAREKALSPWAYRDTAMVLGLTVLLGTTWTLAFFSFGVFLL 477
Cdd:cd15442  158 INSKhlTVHYITVCGYFGLTFLFNTVVLGLVAWKIFHLqSATAGKEKCQAWKGGLTVLGLSCLLGVTWGLAFFTYGSMSV 237
                        250       260
                 ....*....|....*....|.
gi 755526951 478 PQLFLFTIFNSLYGFFLFLWF 498
Cdd:cd15442  238 PTVYIFALLNSLQGLFIFIWF 258
7tmB2_Adhesion cd15040
adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G ...
243-503 4.96e-50

adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G protein-coupled receptors; The B2 subfamily of class B GPCRs consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320168 [Multi-domain]  Cd Length: 253  Bit Score: 171.99  E-value: 4.96e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 243 LEYISFVGCSISIVASLLTILLYAQSRK-QSDSTTRIHMNLNGSVLLLNVTFLLSSQmtlPTMPRPVCKVLAAVLHYALL 321
Cdd:cd15040    4 LSIITYIGCGLSLLGLLLTIITYILFRKlRKRKPTKILLNLCLALLLANLLFLFGIN---STDNPVLCTAVAALLHYFLL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 322 SSLTWMAIEGFNLYLFLGRVYNAYIRRYLLKLCMLGWGFPALLVLLLLMIKSSVYGpcvtslsksqeNGTGFqnvsmCWI 401
Cdd:cd15040   81 ASFMWMLVEALLLYLRLVKVFGTYPRHFILKYALIGWGLPLIIVIITLAVDPDSYG-----------NSSGY-----CWL 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 402 RSPMVHSILVMGYGGFTSLFNLVVLAWALWILCRLRA-REKALSPWAYRDTAMVLGLTVLLGTTWTLAFFSFGVFLLPQL 480
Cdd:cd15040  145 SNGNGLYYAFLGPVLLIILVNLVIFVLVLRKLLRLSAkRNKKKRKKTKAQLRAAVSLFFLLGLTWIFGILAIFGARVVFQ 224
                        250       260
                 ....*....|....*....|...
gi 755526951 481 FLFTIFNSLYGFFLFLWFCSQKR 503
Cdd:cd15040  225 YLFAIFNSLQGFFIFIFHCLRNK 247
7tmB2_GPR112 cd15997
Probable G protein-coupled receptor 112, member of the class B2 family of seven-transmembrane ...
243-502 3.48e-47

Probable G protein-coupled receptor 112, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR112 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR64, GPR97, GPR114, and GPR126. GPR112 is specifically expressed in normal enterochromatin cells and gastrointestinal neuroendocrine carcinoma cells, but its biological function is unknown. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320663  Cd Length: 269  Bit Score: 165.22  E-value: 3.48e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 243 LEYISFVGCSISIV---ASLLTILLYAQSRKqsDSTTRIHMNLNGSVLLLNVTFLLSSQMTlPTMPRPVCKVLAAVLHYA 319
Cdd:cd15997    4 LTLITYLGCGISSIflgITLVTYLAFEKLRR--DYPSKILINLCTALLMLNLVFLLNSWLS-SFNNYGLCITVAAFLHYF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 320 LLSSLTWMAIEGFNLYLFLGRVYNAYIRRYLLKLCMLGWGFPALLVLLLLMIKSSVYGpcVTSLSKSQENGTGFqnvsmC 399
Cdd:cd15997   81 LLASFTWMGLEAVHMYFALVKVFNIYIPNYILKFCIAGWGIPAVVVALVLAINKDFYG--NELSSDSLHPSTPF-----C 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 400 WIRSPMVHSILVMGYGGFTSLFNLVVLAWALWILCRLRARE--KALSPWAYRDTAMVLGLTVLLGTTWTLAFFSFGVFLL 477
Cdd:cd15997  154 WIQDDVVFYISVVAYFCLIFLCNISMFITVLIQIRSMKAKKpsRNWKQGFLHDLKSVASLTFLLGLTWGFAFFAWGPVRI 233
                        250       260
                 ....*....|....*....|....*
gi 755526951 478 PQLFLFTIFNSLYGFFLFLWFCSQK 502
Cdd:cd15997  234 FFLYLFSICNTLQGFFIFVFHCLMK 258
7tmB2_GPR126 cd15996
orphan adhesion receptor GPR126, member of the class B2 family of seven-transmembrane G ...
243-502 2.48e-46

orphan adhesion receptor GPR126, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR126 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR64, GPR97, GPR112, and GPR114. GPR126 is required in Schwann cells for proper differentiation and myelination via G-Protein Activation. GPR126 is believed to couple to G(s)-protein, which leads to activation of adenylate cyclase for cAMP production. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320662  Cd Length: 271  Bit Score: 163.13  E-value: 2.48e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 243 LEYISFVGCSISIVASLLTILLYAQSRK-QSDSTTRIHMNLNGSVLLLNVTFLLSSQMTLPTMpRPVCKVLAAVLHYALL 321
Cdd:cd15996    4 LTFITYIGCGISAIFSAATLLTYIAFEKlRRDYPSKILMNLSTALLFLNLVFLLDGWIASFEI-DELCITVAVLLHFFLL 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 322 SSLTWMAIEGFNLYLFLGRVYNAYIRRYLLKLCMLGWGFPALLVLLLLMIKSSVYGPCVTSLSKSQENGTGFqnvsmCWI 401
Cdd:cd15996   83 ATFTWMGLEAIHMYIALVKVFNTYIRRYILKFCIIGWGLPALIVSIVLASTNDNYGYGYYGKDKDGQGGDEF-----CWI 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 402 RSPMVHSILVMGYGGFTSLFNLVVLAWALWILCRLRARE--KALSPWAYRDTAMVLGLTVLLGTTWTLAFFSFGVFLLPQ 479
Cdd:cd15996  158 KNPVVFYVTCAAYFGIMFLMNVAMFIVVMVQICGRNGKRsnRTLREEILRNLRSVVSLTFLLGMTWGFAFFAWGPVNLAF 237
                        250       260
                 ....*....|....*....|...
gi 755526951 480 LFLFTIFNSLYGFFLFLWFCSQK 502
Cdd:cd15996  238 MYLFTIFNSLQGLFIFVFHCALK 260
7tm_classB cd13952
class B family of seven-transmembrane G protein-coupled receptors; The class B of ...
243-499 5.19e-46

class B family of seven-transmembrane G protein-coupled receptors; The class B of seven-transmembrane GPCRs is classified into three major subfamilies: subfamily B1 (secretin-like receptor family), B2 (adhesion family), and B3 (Methuselah-like family). The class B receptors have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi or prokaryotes. The B1 subfamily comprises receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the subfamily B1 receptors preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The subfamily B2 consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Furthermore, the subfamily B3 includes Methuselah (Mth) protein, which was originally identified in Drosophila as a GPCR affecting stress resistance and aging, and its closely related proteins.


Pssm-ID: 410627 [Multi-domain]  Cd Length: 260  Bit Score: 161.61  E-value: 5.19e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 243 LEYISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTLPTMPrPVCKVLAAVLHYALLS 322
Cdd:cd13952    4 LSIITYIGCSLSLVGLLLTIITYLLFPKLRNLRGKILINLCLSLLLAQLLFLIGQLLTSSDRP-VLCKALAILLHYFLLA 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 323 SLTWMAIEGFNLYLFLGRVYNAYIRRYLLKLCMLGWGFPALLVLLLLMIKSSVYGPcvtslsksqengTGFQNVSMCWIR 402
Cdd:cd13952   83 SFFWMLVEAFDLYRTFVKVFGSSERRRFLKYSLYGWGLPLLIVIITAIVDFSLYGP------------SPGYGGEYCWLS 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 403 SPMVHSILVMGYGGFTSLFNLVVLAWALWILCR-LRAREKALSPWAYRDTA-MVLGLTVLLGTTWTLAFFSFGVFLLPQL 480
Cdd:cd13952  151 NGNALLWAFYGPVLLILLVNLVFFILTVRILLRkLRETPKQSERKSDRKQLrAYLKLFPLMGLTWIFGILAPFVGGSLVF 230
                        250       260
                 ....*....|....*....|
gi 755526951 481 -FLFTIFNSLYGFFLFLWFC 499
Cdd:cd13952  231 wYLFDILNSLQGFFIFLIFC 250
7tmB2_GPR64 cd15444
orphan adhesion receptor GPR64 and related proteins, member of subfamily B2 of the class B ...
243-502 2.48e-45

orphan adhesion receptor GPR64 and related proteins, member of subfamily B2 of the class B secretin-like receptors of seven-transmembrane G protein-coupled receptors; GPR64 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR97, GPR112, GPR114, and GPR126. GPR64 is mainly expressed in the epididymis of male reproductive tract, and targeted deletion of GPR64 causes sperm stasis and efferent duct blockage due to abnormal fluid reabsorption, resulting in male infertility. GPR64 is also over-expressed in Ewing's sarcoma (ES), as well as upregulated in other carcinomas from kidney, prostate or lung, and promotes invasiveness and metastasis in ES via the upregulation of placental growth factor (PGF) and matrix metalloproteinase (MMP) 1. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320560 [Multi-domain]  Cd Length: 271  Bit Score: 160.38  E-value: 2.48e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 243 LEYISFVGCSISIVASLLTILLY-AQSRKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTLPTMPRPVCKVLAAVLHYALL 321
Cdd:cd15444    4 LTFITYIGCGLSAIFLSVTLVTYiAFEKIRRDYPSKILIQLCVALLLLNLVFLLDSWIALYKDIVGLCISVAVFLHYFLL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 322 SSLTWMAIEGFNLYLFLGRVYNAYIRRYLLKLCMLGWGFPALLVLLLLMIKSSVYGpcVTSLSKSQENGTGfqnvSMCWI 401
Cdd:cd15444   84 VSFTWMGLEAFHMYLALVKVFNTYIRKYILKFCIVGWGVPAVVVAIVLAVSKDNYG--LGSYGKSPNGSTD----DFCWI 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 402 RSPMVHSILVMGYGGFTSLFNLVVLAWALWILCRLRAREK--ALSPWAYRDTAMVLGLTVLLGTTWTLAFFSFGVFLLPQ 479
Cdd:cd15444  158 NNNIVFYITVVGYFCVIFLLNISMFIVVLVQLCRIKKQKQlgAQRKTSLQDLRSVAGITFLLGITWGFAFFAWGPVNLAF 237
                        250       260
                 ....*....|....*....|...
gi 755526951 480 LFLFTIFNSLYGFFLFLWFCSQK 502
Cdd:cd15444  238 MYLFAIFNTLQGFFIFIFYCVAK 260
7tmB2_GPR133-like_Adhesion_V cd15933
orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of ...
240-499 5.87e-31

orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group V adhesion GPCRs include orphan receptors GPR133, GPR144, and closely related proteins. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the G(s) protein, leading to activation of adenylate cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320599 [Multi-domain]  Cd Length: 252  Bit Score: 120.51  E-value: 5.87e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 240 QVPLEYISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTLPTMPrpvCKVLAAVLHYA 319
Cdd:cd15933    1 ERALSIISYIGCGISIACLALTLIIFLVLRVLSSDRFQIHKNLCVALLLAQILLLAGEWAEGNKVA---CKVVAILLHFF 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 320 LLSSLTWMAIEGFNLYLFLGRVYNAYIRRYLLKLcmLGWGFPALLVLLLLMIKSSVYGpcvtslsksQENGtgfqnvsmC 399
Cdd:cd15933   78 FMAAFSWMLVEGLHLYLMIVKVFNYKSKMRYYYF--IGWGLPAIIVAISLAILFDDYG---------SPNV--------C 138
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 400 WIrSPMVHSILV-MGYGGFTSLFNLVVLAWALWILCRLR---AREKALSPWAYRDTAMVLG-LTVLLGTTWTLAFFSFGV 474
Cdd:cd15933  139 WL-SLDDGLIWAfVGPVIFIITVNTVILILVVKITVSLStndAKKSQGTLAQIKSTAKASVvLLPILGLTWLFGVLVVNS 217
                        250       260
                 ....*....|....*....|....*
gi 755526951 475 FLLPQLFLFTIFNSLYGFFLFLWFC 499
Cdd:cd15933  218 QTIVFQYIFVILNSLQGLMIFLFHC 242
7tmB2_latrophilin-like_invertebrate cd15440
invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane ...
240-499 8.60e-31

invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; This subgroup includes latrophilin-like proteins that are found in invertebrates such as insects and worms. Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of vertebrate latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320556 [Multi-domain]  Cd Length: 259  Bit Score: 120.45  E-value: 8.60e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 240 QVPLEYISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTLPtmpRPVCKVLAAVLHYA 319
Cdd:cd15440    1 QSALTFITYIGCIISIVCLLLAFITFTCFRNLQCDRNTIHKNLCLCLLIAEIVFLLGIDQTEN---RTLCGVIAGLLHYF 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 320 LLSSLTWMAIEGFNLYLFLGRVYNAYIRRyLLKLCMLGWGFPALLVLLLLMIKSSVYGpcvTSlsksqengtgfqnvSMC 399
Cdd:cd15440   78 FLAAFSWMLLEGFQLYVMLVEVFEPEKSR-IKWYYLFGYGLPALIVAVSAGVDPTGYG---TE--------------DHC 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 400 WIRS--PMVHS-----ILVMgyggftsLFNLVVLAWALWILCRLRAREKALSPWAYRDTAMV-----LGLTVLLGTTWTL 467
Cdd:cd15440  140 WLSTenGFIWSfvgpvIVVL-------LANLVFLGMAIYVMCRHSSRSASKKDASKLKNIRGwlkgsIVLVVLLGLTWTF 212
                        250       260       270
                 ....*....|....*....|....*....|..
gi 755526951 468 AFFSFGVFLLPQLFLFTIFNSLYGFFLFLWFC 499
Cdd:cd15440  213 GLLFINQESIVMAYIFTILNSLQGLFIFIFHC 244
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
242-494 1.37e-30

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 119.31  E-value: 1.37e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951  242 PLEYISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFL-----LSSQMTLPTMPRPVCKVLAAVL 316
Cdd:pfam00002   3 SLKVIYTVGYSLSLVALLLAIAIFLLFRKLHCTRNYIHLNLFASFILRALLFLvgdavLFNKQDLDHCSWVGCKVVAVFL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951  317 HYALLSSLTWMAIEGFNLYLFLGRVYNAYiRRYLLKLCMLGWGFPALlvllllmikssVYGPCVTSLSKsqengtGFQNV 396
Cdd:pfam00002  83 HYFFLANFFWMLVEGLYLYTLLVEVFFSE-RKYFWWYLLIGWGVPAL-----------VVGIWAGVDPK------GYGED 144
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951  397 SMCWIRSPMVHSILVMGYGGFTSLFNLVVLAWALWILC-RLRAREKALS--PWAYRDTAMVLGLTVLLGTTWTLAFFSFG 473
Cdd:pfam00002 145 DGCWLSNENGLWWIIRGPILLIILVNFIIFINIVRILVqKLRETNMGKSdlKQYRRLAKSTLLLLPLLGITWVFGLFAFN 224
                         250       260
                  ....*....|....*....|....
gi 755526951  474 ---VFLLPQLFLFTIFNSLYGFFL 494
Cdd:pfam00002 225 penTLRVVFLYLFLILNSFQGFFV 248
7tmB3_Methuselah-like cd15039
Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G ...
242-503 4.29e-23

Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G protein-coupled receptors; The subfamily B3 of class B GPCRs consists of Methuselah (Mth) and its closely related proteins found in bilateria. Mth was originally identified in Drosophila as a GPCR affecting stress resistance and aging. In addition to the seven transmembrane helices, Mth contains an N-terminal extracellular domain involved in ligand binding, and a third intracellular loop (IC3) required for the specificity of G-protein coupling. Drosophila Mth mutants showed an increase in average lifespan by 35% and greater resistance to a variety of stress factors, including starvation, high temperature, and paraquat-induced oxidative toxicity. Moreover, mutations in two endogenous peptide ligands of Methuselah, Stunted A and B, showed an increased in lifespan and resistance to oxidative stress induced by dietary paraquat. These results strongly suggest that the Stunted-Methuselah system plays important roles in stress response and aging.


Pssm-ID: 410632 [Multi-domain]  Cd Length: 270  Bit Score: 98.84  E-value: 4.29e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 242 PLEYISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTLPTMPrpVCKVLAAVLHYALL 321
Cdd:cd15039    3 ILGILTLIGLIISLVFLLLTLAVYALLPELRNLHGKCLMCLVLSLFVAYLLLLIGQLLSSGDST--LCVALGILLHFFFL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 322 SSLTWMAIEGFNLYL----FLGRVYNAYIRRYLLKLCMLGWGFPALLVLLLLMIKssvYGPCVTSLSKsqenGTGFQNvs 397
Cdd:cd15039   81 AAFFWLNVMSFDIWRtfrgKRSSSSRSKERKRFLRYSLYAWGVPLLLVAVTIIVD---FSPNTDSLRP----GYGEGS-- 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 398 mCWIRSPMVHSILVMGYGGFTSLFNLVVLAWALWILCRLRAREKALSPWAYRDTA---MVLGLTVLLGTTWTLAFFSFGV 474
Cdd:cd15039  152 -CWISNPWALLLYFYGPVALLLLFNIILFILTAIRIRKVKKETAKVQSRLRSDKQrfrLYLKLFVIMGVTWILEIISWFV 230
                        250       260       270
                 ....*....|....*....|....*....|
gi 755526951 475 FLLPQL-FLFTIFNSLYGFFLFLWFCSQKR 503
Cdd:cd15039  231 GGSSVLwYIFDILNGLQGVFIFLIFVCKRR 260
7tmB2_GPR133 cd15256
orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G ...
240-499 1.21e-22

orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR133 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR144. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320384 [Multi-domain]  Cd Length: 260  Bit Score: 97.30  E-value: 1.21e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 240 QVPLEYISFVGCSISIVASLLTILLYAQSrkQSDSTTR-----IHMNLNGSVLLLNVTFLLSSQMTLPTMPrpvCKVLAA 314
Cdd:cd15256    1 QVALSSITYVGCSLSIFCLAITLVTFAVL--SSVSTIRnqryhIHANLSFAVLVAQILLLISFRFEPGTLP---CKIMAI 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 315 VLHYALLSSLTWMAIEGFNLYLFLGRVYNAYIRRYLLKLCMlGWGFPALLvllllmikssvygpCVTSLSKSQENgtgFQ 394
Cdd:cd15256   76 LLHFFFLSAFAWMLVEGLHLYSMVIKVFGSEESKHFYYYGI-GWGSPLLI--------------CIISLTSALDS---YG 137
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 395 NVSMCWIRSPMVHSILVMGYGGFTSLFNLVVLAWALWILCRLRAREKAL--SPWAYRDTAMVLG-LTVLLGTTWTLAFFS 471
Cdd:cd15256  138 ESDNCWLSLENGAIWAFVAPALFVIVVNIGILIAVTRVISRISADNYKVhgDANAFKLTAKAVAvLLPILGSSWVFGVLA 217
                        250       260
                 ....*....|....*....|....*...
gi 755526951 472 FGVFLLPQLFLFTIFNSLYGFFLFLWFC 499
Cdd:cd15256  218 VNTHALVFQYMFAIFNSLQGFFIFLFHC 245
7tmB2_EMR cd15439
epidermal growth factor-like module-containing mucin-like hormone receptors, member of the ...
242-499 8.04e-22

epidermal growth factor-like module-containing mucin-like hormone receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4) and the leukocyte cell-surface antigen CD97, are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying number of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of EMR2, alternative splicing results in four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320555 [Multi-domain]  Cd Length: 263  Bit Score: 95.10  E-value: 8.04e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 242 PLEYISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTLPTMprpVCKVLAAVLHYALL 321
Cdd:cd15439    3 ALTVITYVGLIISLLCLFLAILTFLLCRSIRNTSTSLHLQLSLCLFLADLLFLVGIDRTDNKV---LCSIIAGFLHYLFL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 322 SSLTWMAIEGFNLYLF---LGRVYNAYIRRYLLK-LCMLGWGFPALLVLLLLMIKSSVYGP---CVTSLSKsqengtGFq 394
Cdd:cd15439   80 ACFAWMFLEAVHLFLTvrnLKVVNYFSSHRFKKRfMYPVGYGLPAVIVAISAAVNPQGYGTpkhCWLSMEK------GF- 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 395 nvsmCWIRSPMVHSILVMgyggftslfNLVVLAWALWIL-CRLRAREKALSpwAYRDTAM----VLGLTVLLGTTWTLAF 469
Cdd:cd15439  153 ----IWSFLGPVCVIIVI---------NLVLFCLTLWILrEKLSSLNAEVS--TLKNTRLltfkAIAQLFILGCTWILGL 217
                        250       260       270
                 ....*....|....*....|....*....|
gi 755526951 470 FSFGVFLLPQLFLFTIFNSLYGFFLFLWFC 499
Cdd:cd15439  218 FQVGPVATVMAYLFTITNSLQGVFIFLVHC 247
7tmB2_Latrophilin_Adhesion_I cd15252
Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of ...
240-503 3.43e-21

Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; Group I adhesion GPCRs consist of latrophilins (also called lectomedins or latrotoxin receptors) and ETL (EGF-TM7-latrophilin-related protein. These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320380 [Multi-domain]  Cd Length: 257  Bit Score: 92.95  E-value: 3.43e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 240 QVPLEYISFVGCSISIVASLLTILLYAQSRK-QSDSTTrIHMNLNGSVLLLNVTFLLSSQMTLPTMprpVCKVLAAVLHY 318
Cdd:cd15252    1 YNILTRITQVGIIISLVCLAICIFTFWFFRGlQSDRTT-IHKNLCISLFLAELVFLIGINTTTNKI---FCSVIAGLLHY 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 319 ALLSSLTWMAIEGFNLYLFL-GRVYNAYIRRYLLKLcmLGWGFPALLVLLLLMIKSSVYGpcvtslsksqengtgfqNVS 397
Cdd:cd15252   77 FFLAAFAWMFIEGIQLYLMLvEVFENEGSRHKNFYI--FGYGSPAVIVGVSAALGYRYYG-----------------TTK 137
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 398 MCWIRSPMVHSILVMGYGGFTSLFNLVVLAWALWILCRLRAREKALSPWAYRDTAMVLG---LTVLLGTTWTLAFFSFGV 474
Cdd:cd15252  138 VCWLSTENYFIWSFIGPATLIILLNLIFLGVAIYKMFRHTAGLKPEVSCLENIRSWARGaiaLLFLLGLTWIFGVLHINH 217
                        250       260
                 ....*....|....*....|....*....
gi 755526951 475 FLLPQLFLFTIFNSLYGFFLFLWFCSQKR 503
Cdd:cd15252  218 ASVVMAYLFTVSNSLQGMFIFLFHCVLSR 246
7tmB2_GPR128 cd15257
orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G ...
241-498 1.38e-19

orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR128 is an orphan receptor of the adhesion family (subclass B2) that belongs to the class B GPCRs. Expression of GPR128 was detected in the mouse intestinal mucosa and is thought to be involved in energy balance, as its knockout mice showed a decrease in body weight gain and an increase in intestinal contraction frequency compared to wild-type controls. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320385 [Multi-domain]  Cd Length: 303  Bit Score: 89.55  E-value: 1.38e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 241 VPLEYISFVGCSISIVASLLTILLYAQSRK-QSDSTTRIHMNLNGSVLLLNVTFL-----------------------LS 296
Cdd:cd15257    2 KTLDIISTIGCVLSIAGLVITIIFHLHTRKlRKSSVTWVLLNLCSSLLLFNIIFTsgventnndyeistvpdretntvLL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 297 SQMTLPtMPRPVCKVLAAVLHYALLSSLTWMAIEGFNLYLFLGRVYNAYIRRYLLKLCMLGWGFPALLVLLLLMIKSSVY 376
Cdd:cd15257   82 SEEYVE-PDTDVCTAVAALLHYFLLVTFMWNAVYSAQLYLLLIRMMKPLPEMFILQASAIGWGIPAVVVAITLGATYRFP 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 377 GPcvtslskSQENGTGFQNVSMCW---------IRSPMVHSILVMgyGGFTSLFNLVVLAWALWILCRLRAREKALSPWA 447
Cdd:cd15257  161 TS-------LPVFTRTYRQEEFCWlaaldknfdIKKPLLWGFLLP--VGLILITNVILFIMTSQKVLKKNNKKLTTKKRS 231
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 755526951 448 Y-RDTAMVLGLTVLLGTTWTLAFFSFGVFLLPQL---FLFTIFNSLYGFFLFLWF 498
Cdd:cd15257  232 YmKKIYITVSVAVVFGITWILGYLMLVNNDLSKLvfsYIFCITNTTQGVQIFILY 286
7tmB2_CD97 cd15438
CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; ...
242-499 1.19e-18

CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320554 [Multi-domain]  Cd Length: 261  Bit Score: 85.58  E-value: 1.19e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 242 PLEYISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTLPTMprpVCKVLAAVLHYALL 321
Cdd:cd15438    3 PLTLITKVGLSVSLFCLFLCILTFLFCRSIRGTRNTIHLHLCLSLFLAHLIFLLGINNTNNQV---ACAVVAGLLHYFFL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 322 SSLTWMAIEGFNLYLFLGRVYNAYIRRYLLkLCMLGWGFPALLVLLLLMIKSSVYGpcvtslsksqengtgfqNVSMCWI 401
Cdd:cd15438   80 AAFCWMSLEGVELYLMVVQVFNTQSLKKRY-LLLIGYGVPLVIVAISAAVNSKGYG-----------------TQRHCWL 141
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 402 RSPMVHSILVMGYGGFTSLFNLVVLAWALWILC-----------RLRaREKALspwayrdTAMVLGLTVLLGTTWTLAFF 470
Cdd:cd15438  142 SLERGFLWSFLGPVCLIILVNAIIFVITVWKLAekfssinpdmeKLR-KIRAL-------TITAIAQLCILGCTWIFGFF 213
                        250       260
                 ....*....|....*....|....*....
gi 755526951 471 SFGVFLLPQLFLFTIFNSLYGFFLFLWFC 499
Cdd:cd15438  214 QFSDSTLVMSYLFTILNSLQGLFIFLLHC 242
7tmB2_CELSR_Adhesion_IV cd15441
cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 ...
241-499 1.06e-17

cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuron migration and axon guidance in the CNS.


Pssm-ID: 320557 [Multi-domain]  Cd Length: 254  Bit Score: 82.68  E-value: 1.06e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 241 VPLEYISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTLPTMPrpvCKVLAAVLHYAL 320
Cdd:cd15441    2 LLLKIVTYIGIGISLVLLVIAFLVLSCLRGLQSNSNSIHKNLVACLLLAELLFLLGINQTENLFP---CKLIAILLHYFY 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 321 LSSLTWMAIEGFNLYLFLGRVYNA---YIRRYLLklcmLGWGFPALLVLLLLMIKSSVYGpcvtslsksqengtgfqNVS 397
Cdd:cd15441   79 LSAFSWLLVESLHLYRMLTEPRDInhgHMRFYYL----LGYGIPAIIVGLSVGLRPDGYG-----------------NPD 137
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 398 MCWIrspMVHSILVMGYGG---FTSLFNLVVLAWALWILCRLRAREKALSPWAYRDTAMVLgLTVLLGTTWTLAFFSFGV 474
Cdd:cd15441  138 FCWL---SVNETLIWSFAGpiaFVIVITLIIFILALRASCTLKRHVLEKASVRTDLRSSFL-LLPLLGATWVFGLLAVNE 213
                        250       260
                 ....*....|....*....|....*
gi 755526951 475 FLLPQLFLFTIFNSLYGFFLFLWFC 499
Cdd:cd15441  214 DSELLHYLFAGLNFLQGLFIFLFYC 238
7tmB2_Latrophilin-1 cd16007
Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled ...
243-503 2.67e-17

Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320673 [Multi-domain]  Cd Length: 258  Bit Score: 81.89  E-value: 2.67e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 243 LEYISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTLPTMprpVCKVLAAVLHYALLS 322
Cdd:cd16007    4 LSVITWVGIVISLVCLAICISTFCFLRGLQTDRNTIHKNLCINLFLAELLFLIGIDKTQYQI---ACPIFAGLLHFFFLA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 323 SLTWMAIEGFNLYLFLGRVYNA-YIRRYLLKLCmlGWGFPALLVLLLLMIKSSVYGpcvtslsksqengtgfqNVSMCWI 401
Cdd:cd16007   81 AFSWLCLEGVQLYLMLVEVFESeYSRKKYYYLC--GYCFPALVVGISAAIDYRSYG-----------------TEKACWL 141
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 402 RspmVHSILVMGYGGFTSLFNLVVLAWALWILCRLRAREKALSPWAYRDTAM------VLGLTVLLGTTWTLAFFSFGVF 475
Cdd:cd16007  142 R---VDNYFIWSFIGPVSFVIVVNLVFLMVTLHKMIRSSSVLKPDSSRLDNIkswalgAITLLFLLGLTWAFGLLFINKE 218
                        250       260
                 ....*....|....*....|....*...
gi 755526951 476 LLPQLFLFTIFNSLYGFFLFLWFCSQKR 503
Cdd:cd16007  219 SVVMAYLFTTFNAFQGMFIFIFHCALQK 246
7tmB2_EMR_Adhesion_II cd15931
EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of ...
243-499 2.86e-17

EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. On the other hand, EMR2 generates four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320597 [Multi-domain]  Cd Length: 262  Bit Score: 81.79  E-value: 2.86e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 243 LEYISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTLPTMPrpvCKVLAAVLHYALLS 322
Cdd:cd15931    4 LEWINRVGVIVSLFCLGLAIFTFLLCRWIPKINTTAHLHLCLCLSMSHTLFLAGIEYVENELA---CTVMAGLLHYLFLA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 323 SLTWMAIEGFNLYLFLGRVYNA-YIRRYLLK---LCMLGWGFPALLVLLLLMIKSSVYGpcvtslsksqengtgfqNVSM 398
Cdd:cd15931   81 SFVWMLLEALQLHLLVRRLTKVqVIQRDGLPrplLCLIGYGVPFLIVGVSALVYSDGYG-----------------EAKM 143
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 399 CWIRSPMVHSILVMGYGGFTSLFNLVVLAWALWILcRLRAREKALSPWAYRDTAMVL----GLTVLLGTTWTLAFFSFGV 474
Cdd:cd15931  144 CWLSQERGFNWSFLGPVIAIIGINWILFCATLWCL-RQTLSNMNSDISQLKDTRLLTfkavAQLFILGCTWVLGLFQTNP 222
                        250       260
                 ....*....|....*....|....*
gi 755526951 475 FLLPQLFLFTIFNSLYGFFLFLWFC 499
Cdd:cd15931  223 VALVFQYLFTILNSLQGAFLFLVHC 247
7tmB2_Latrophilin cd15436
Latrophilins, member of the class B2 family of seven-transmembrane G protein-coupled receptors; ...
243-503 1.01e-16

Latrophilins, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320552 [Multi-domain]  Cd Length: 258  Bit Score: 79.84  E-value: 1.01e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 243 LEYISFVGCSISIVASLLTILLYAQSRK-QSDSTTrIHMNLNGSVLLLNVTFLLSSQMTLPTMprpVCKVLAAVLHYALL 321
Cdd:cd15436    4 LFVITWVGIVISLVCLLICIFTFCFFRGlQTDRNT-IHKNLCINLFIAELLFLIGINRTQYTI---ACPIFAGLLHFFFL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 322 SSLTWMAIEGFNLYLFLGRVYNA-YIRRYLLKLCmlGWGFPALLVLLLLMIKSSVYGpcvtslsksqengtgfqNVSMCW 400
Cdd:cd15436   80 AAFCWLCLEGVQLYLLLVEVFESeYSRRKYFYLC--GYSFPALVVAVSAAIDYRSYG-----------------TEKACW 140
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 401 IRSPMVHSILVMGYGGFTSLFNLVVLAWALWILCRLRAREKALSPWAYRDTAMVLG---LTVLLGTTWTLAFFSFGVFLL 477
Cdd:cd15436  141 LRVDNYFIWSFIGPVTFVITLNLVFLVITLHKMVSHSDLLKPDSSRLDNIKSWALGaiaLLFLLGLTWSFGLMFINEESV 220
                        250       260
                 ....*....|....*....|....*.
gi 755526951 478 PQLFLFTIFNSLYGFFLFLWFCSQKR 503
Cdd:cd15436  221 VMAYLFTIFNAFQGVFIFIFHCALQK 246
7tmB2_CELSR1 cd15991
Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of ...
241-499 1.15e-16

Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320657 [Multi-domain]  Cd Length: 254  Bit Score: 79.89  E-value: 1.15e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 241 VPLEYISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTLPTMprpVCKVLAAVLHYAL 320
Cdd:cd15991    2 LPLKIITYTTVSLSLVALLITFILLVLIRTLRSNLHSIHKNLVAALFFSELIFLIGINQTENPF---VCTVVAILLHYFY 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 321 LSSLTWMAIEGFNLYLFLGRVYN---AYIRRYLlklcMLGWGFPALlvllllmikssvygpcVTSLSKSQENgTGFQNVS 397
Cdd:cd15991   79 MSTFAWMFVEGLHIYRMLTEVRNintGHMRFYY----VVGWGIPAI----------------ITGLAVGLDP-QGYGNPD 137
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 398 MCWIRspmVHSILVMGYGGFTS---LFNLVVLAWALWILCRLRAR--EKALSPWAYRdTAMVLGLtvLLGTTWTLAFFSF 472
Cdd:cd15991  138 FCWLS---VQDTLIWSFAGPIGivvIINTVIFVLAAKASCGRRQRyfEKSGVISMLR-TAFLLLL--LISATWLLGLMAV 211
                        250       260
                 ....*....|....*....|....*..
gi 755526951 473 GVFLLPQLFLFTIFNSLYGFFLFLWFC 499
Cdd:cd15991  212 NSDTLSFHYLFAIFSCLQGIFIFFFHC 238
7tmB2_Latrophilin-2 cd16006
Latrophilin-2, member of the class B2 family of seven-transmembrane G protein-coupled ...
243-503 1.27e-15

Latrophilin-2, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320672 [Multi-domain]  Cd Length: 258  Bit Score: 76.88  E-value: 1.27e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 243 LEYISFVGCSISIVASLLTILLYAQSRK-QSDSTTrIHMNLNGSVLLLNVTFLLSSQMTLPTMprpVCKVLAAVLHYALL 321
Cdd:cd16006    4 LTVITWVGIVISLVCLAICIFTFCFFRGlQSDRNT-IHKNLCINLFIAEFIFLIGIDKTEYKI---ACPIFAGLLHFFFL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 322 SSLTWMAIEGFNLYLFLGRVYNA-YIRRYLLKLCmlGWGFPALLVLLLLMIKSSVYGpcvtslsksqengtgfqNVSMCW 400
Cdd:cd16006   80 AAFAWMCLEGVQLYLMLVEVFESeYSRKKYYYVA--GYLFPATVVGVSAAIDYKSYG-----------------TEKACW 140
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 401 IRspmVHSILVMGYGGFTSLFNLVVLAWALWILCRLRAREKALSPWAYRDTAM---VLG---LTVLLGTTWTLAFFSFGV 474
Cdd:cd16006  141 LR---VDNYFIWSFIGPVTFIILLNLIFLVITLCKMVKHSNTLKPDSSRLENIkswVLGafaLLCLLGLTWSFGLLFINE 217
                        250       260
                 ....*....|....*....|....*....
gi 755526951 475 FLLPQLFLFTIFNSLYGFFLFLWFCSQKR 503
Cdd:cd16006  218 ETIVMAYLFTIFNAFQGMFIFIFHCALQK 246
7tmB2_Latrophilin-3 cd16005
Latrophilin-3, member of the class B2 family of seven-transmembrane G protein-coupled ...
243-499 1.85e-15

Latrophilin-3, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320671 [Multi-domain]  Cd Length: 258  Bit Score: 76.52  E-value: 1.85e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 243 LEYISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTlptmPRPV-CKVLAAVLHYALL 321
Cdd:cd16005    4 LDVITWVGILLSLVCLLICIFTFCFFRGLQSDRNTIHKNLCISLFVAELLFLIGINRT----DQPIaCAVFAALLHFFFL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 322 SSLTWMAIEGFNLYLFLGRVYNA--YIRRYLLklcMLGWGFPALLVLLLLMIKSSVYGpcvtslsksqengtgfqNVSMC 399
Cdd:cd16005   80 AAFTWMFLEGVQLYIMLVEVFESehSRRKYFY---LVGYGMPALIVAVSAAVDYRSYG-----------------TDKVC 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 400 WIRSPMVHSILVMGYGGFTSLFNLVVLAWALWILCRLRAREKALSPWAYRDTAMVLG---LTVLLGTTWTLAFFSFGVFL 476
Cdd:cd16005  140 WLRLDTYFIWSFIGPATLIIMLNVIFLGIALYKMFHHTAILKPESGCLDNIKSWVIGaiaLLCLLGLTWAFGLMYINEST 219
                        250       260
                 ....*....|....*....|...
gi 755526951 477 LPQLFLFTIFNSLYGFFLFLWFC 499
Cdd:cd16005  220 VIMAYLFTIFNSLQGMFIFIFHC 242
GPS pfam01825
GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for ...
183-228 2.11e-15

GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for auto-proteolysis, so is thus named, GPS. The GPS motif is a conserved sequence of ~40 amino acids containing canonical cysteine and tryptophan residues, and is the most highly conserved part of the domain. In most, if not all, cell-adhesion GPCRs these undergo autoproteolysis in the GPS between a conserved aliphatic residue (usually a leucine) and a threonine, serine, or cysteine residue. In higher eukaryotes this motif is found embedded in the C-terminal beta-stranded part of a GAIN domain - GPCR-Autoproteolysis INducing (GAIN). The GAIN-GPS domain adopts a fold in which the GPS motif, at the C-terminus, forms five beta-strands that are tightly integrated into the overall GAIN domain. The GPS motif, evolutionarily conserved from tetrahymena to mammals, is the only extracellular domain shared by all human cell-adhesion GPCRs and PKD proteins, and is the locus of multiple human disease mutations. The GAIN-GPS domain is both necessary and sufficient functionally for autoproteolysis, suggesting an autoproteolytic mechanism whereby the overall GAIN domain fine-tunes the chemical environment in the GPS to catalyze peptide bond hydrolysis. In the cell-adhesion GPCRs and PKD proteins, the GPS motif is always located at the end of their long N-terminal extracellular regions, immediately before the first transmembrane helix of the respective protein.


Pssm-ID: 460350  Cd Length: 44  Bit Score: 70.03  E-value: 2.11e-15
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 755526951  183 VSCVFWKEGASksSWGAWSPEGCYTEQPSATQVLCHCNHLTYFAVL 228
Cdd:pfam01825   1 PQCVFWDFTNS--TTGRWSTEGCTTVSLNDTHTVCSCNHLTSFAVL 44
7tmB1_hormone_R cd15041
The subfamily B1 of hormone receptors (secretin-like), member of the class B family ...
245-499 2.17e-15

The subfamily B1 of hormone receptors (secretin-like), member of the class B family seven-transmembrane G protein-coupled receptors; The B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of this subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. Moreover, the B1 subfamily receptors play key roles in hormone homeostasis and are promising drug targets in various human diseases including diabetes, osteoporosis, obesity, neurodegenerative conditions (Alzheimer###s and Parkinson's), cardiovascular disease, migraine, and psychiatric disorders (anxiety, depression). Furthermore, the subfamilies B2 and B3 consist of receptors that are capable of interacting with epidermal growth factors (EGF) and the Drosophila melanogaster Methuselah gene product (Mth), respectively. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 341321 [Multi-domain]  Cd Length: 273  Bit Score: 76.49  E-value: 2.17e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 245 YISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLL------SSQMTLPTMP------RPVCKVL 312
Cdd:cd15041    6 YIYLVGYSLSLVALLPAIVIFLYFRSLRCTRIRLHINLFLSFILRAVFWIIwdllvvYDRLTSSGVEtvlmqnPVGCKLL 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 313 AAVLHYALLSSLTWMAIEGFNLYLFLGRVyNAYIRRYLLKLCMLGWGFPALLVLLLLMIKSSVygpcvtslsksqengtg 392
Cdd:cd15041   86 SVLKRYFKSANYFWMLCEGLYLHRLIVVA-FFSEPSSLKLYYAIGWGLPLVIVVIWAIVRALL----------------- 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 393 fqNVSMCW-----------IRSPMVHSILVmgyggftslfNLVVLAWALWILC-RLRAREKALSPWAYRDTAMVLGLTVL 460
Cdd:cd15041  148 --SNESCWisynnghyewiLYGPNLLALLV----------NLFFLINILRILLtKLRSHPNAEPSNYRKAVKATLILIPL 215
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 755526951 461 LGTTWTLAFFSF---GVFLLPQLFLFTIFNSLYGFFLFLWFC 499
Cdd:cd15041  216 FGIQYLLTIYRPpdgSEGELVYEYFNAILNSSQGFFVAVIYC 257
7tmB2_ETL cd15437
Epidermal Growth Factor, latrophilin and seven transmembrane domain-containing protein 1; ...
243-503 8.62e-12

Epidermal Growth Factor, latrophilin and seven transmembrane domain-containing protein 1; member of the class B2 family of seven-transmembrane G protein-coupled receptors; ETL (EGF-TM7-latrophilin-related protein) belongs to Group I adhesion GPCRs, which also include latrophilins (also called lectomedins or latrotoxin receptors). All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. ETL, for instance, contains EGF-like repeats, which also present in other EGF-TM7 adhesion GPCRs, such as Cadherin EGF LAG seven-pass G-type receptors (CELSR1-3), EGF-like module receptors (EMR1-3), CD97, and Flamingo. ETL is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320553 [Multi-domain]  Cd Length: 258  Bit Score: 65.28  E-value: 8.62e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 243 LEYISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTLPTMprpVCKVLAAVLHYALLS 322
Cdd:cd15437    4 LTRITQLGIIISLICLSMCIFTFWFFSEIQSTRTTIHKNLCCSLFLAELIFLIGINMNANKL---FCSIIAGLLHYFFLA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 323 SLTWMAIEGFNLYLF-LGRVYNayiRRYLLK-LCMLGWGFPALLVLLLLMIKSSVYGpcvtslsksqengtgfqNVSMCW 400
Cdd:cd15437   81 AFAWMCIEGIHLYLIvVGVIYN---KGFLHKnFYIFGYGSPAVVVGISAALGYKYYG-----------------TTKVCW 140
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 401 IRSPMVHSILVMGYGGFTSLFNLVVLAWALWILCRLRAREKA-LSPWA-YRDTAM-VLGLTVLLGTTWTLAFFSFGVFLL 477
Cdd:cd15437  141 LSTENNFIWSFIGPACLIILVNLLAFGVIIYKVFRHTAMLKPeVSCYEnIRSCARgALALLFLLGATWIFGVLHVVYGSV 220
                        250       260
                 ....*....|....*....|....*.
gi 755526951 478 PQLFLFTIFNSLYGFFLFLWFCSQKR 503
Cdd:cd15437  221 VTAYLFTISNAFQGMFIFIFLCVLSR 246
GPS smart00303
G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin ...
181-229 1.25e-10

G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin REJ and polycystin.


Pssm-ID: 197639  Cd Length: 49  Bit Score: 56.63  E-value: 1.25e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 755526951   181 YTVSCVFWKEGAsksswGAWSPEGCYTEQPSATQVLCHCNHLTYFAVLM 229
Cdd:smart00303   1 FNPICVFWDESS-----GEWSTRGCELLETNGTHTTCSCNHLTTFAVLM 44
7tmB1_CRF-R cd15264
corticotropin-releasing factor receptors, member of the class B family of seven-transmembrane ...
246-499 4.34e-10

corticotropin-releasing factor receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320392 [Multi-domain]  Cd Length: 265  Bit Score: 60.51  E-value: 4.34e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 246 ISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVT-FLLSSQMTLPTMP--RPVCKVLAAVLHYALLS 322
Cdd:cd15264    7 IYYLGFSISLVALAVALIIFLYFRSLRCLRNNIHCNLIVTFILRNVTwFIMQNTLTEIHHQsnQWVCRLIVTVYNYFQVT 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 323 SLTWMAIEGFNLYLFLGRVYNA-YIRRYLLKLcmLGWGFPALLVLLLLMIKSSvygpcvtslsksqengtgFQNVSmCWI 401
Cdd:cd15264   87 NFFWMFVEGLYLHTMIVWAYSAdKIRFWYYIV--IGWCIPCPFVLAWAIVKLL------------------YENEH-CWL 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 402 -RSPMVH-SILVMGYGGFTSLFNLVVLAWALWIL-CRLRAREKALSPWAYRDTAMVLGLTVLLGTTWTLAFFSFGVFLLP 478
Cdd:cd15264  146 pKSENSYyDYIYQGPILLVLLINFIFLFNIVWVLiTKLRASNTLETIQYRKAVKATLVLLPLLGITYMLFFINPGDDKTS 225
                        250       260
                 ....*....|....*....|....
gi 755526951 479 QL-FLF--TIFNSLYGFFLFLWFC 499
Cdd:cd15264  226 RLvFIYfnTFLQSFQGLFVAVFYC 249
7tmB2_GPR116-like_Adhesion_VI cd15932
orphan GPR116 and related proteins, group IV adhesion GPCRs, member of the class B2 family of ...
240-499 2.34e-09

orphan GPR116 and related proteins, group IV adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group VI adhesion GPCRs consist of orphan receptors GPR110, GPR111, GPR113, GPR115, GPR116, and closely related proteins. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR110 possesses a SEA box in the N-terminal has been identified as an oncogene over-expressed in lung and prostate cancer. GPR113 contains a hormone binding domain and one EGF (epidermal grown factor) domain. GPR112 has extremely long N-terminus (about 2,400 amino acids) containing a number of Ser/Thr-rich glycosylation sites and a pentraxin (PTX) domain. GPR116 has two C2-set immunoglobulin-like repeats, which is found in the members of the immunoglobulin superfamily of cell surface proteins, and a SEA (sea urchin sperm protein, enterokinase, and a grin)-box, which is present in the extracellular domain of the transmembrane mucin (MUC) family and known to enhance O-glycosylation. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320598 [Multi-domain]  Cd Length: 268  Bit Score: 58.09  E-value: 2.34e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 240 QVPLEYISFVGCSISIVASLLTILLYA----QSRKQSDSTTRiH---MNLNGSVLLLNVTFLLSSQMTLPTMPRPVCKVL 312
Cdd:cd15932    1 SPALDYITYVGLGISILSLVLCLIIEAlvwkSVTKNKTSYMR-HvclVNIALSLLIADIWFIIGAAISTPPNPSPACTAA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 313 AAVLHYALLSSLTWMAIEGFNLYLFLGRVYNAYIRRYLLKLCM-LGWGFPAllvlLLLMIKSSVYGPcvtslsksqenGT 391
Cdd:cd15932   80 TFFIHFFYLALFFWMLTLGLLLFYRLVLVFHDMSKSTMMAIAFsLGYGCPL----IIAIITVAATAP-----------QG 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 392 GFQNVSMCWIRSPMVHSILVMGYGGFT-SLFNLVVLAWALWILCR------LRAREKALspwAYRDTAMVLGLTVLLGTT 464
Cdd:cd15932  145 GYTRKGVCWLNWDKTKALLAFVIPALAiVVVNFIILIVVIFKLLRpsvgerPSKDEKNA---LVQIGKSVAILTPLLGLT 221
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 755526951 465 WTlafFSFGVFLLPQ----LFLFTIFNSLYGFFLFLWFC 499
Cdd:cd15932  222 WG---FGLGTMIDPKslafHIIFAILNSFQGFFILVFGT 257
7tmB2_BAI_Adhesion_VII cd15251
brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 ...
249-503 5.23e-09

brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediate direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320379  Cd Length: 253  Bit Score: 56.88  E-value: 5.23e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 249 VGCSISIVASLLTILLYAQS-RKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTLPtmpRPVCKVLAAVLHYALLSSLTWM 327
Cdd:cd15251   10 VGCGVSCLALLTLLAIYAAFwRYIRSERSIILINFCLSIISSNILILVGQTQTLN---KGVCTMTAAFLHFFFLSSFCWV 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 328 AIEGFNLYL-FLGRVYNAYIRRYLLklcMLGWGFPALlvllllmikssvygpcVTSLSKSQENGTGFQNVSMCWIRspmV 406
Cdd:cd15251   87 LTEAWQSYMaVTGRMRTRLIRKRFL---CLGWGLPAL----------------VVAVSVGFTRTKGYGTSSYCWLS---L 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 407 HSILVMGYGGFTSLFNLVVLAWALWILCRLRAREKAL-----SPWAyrdTAMVLGLTVLLGTTWTLAFFSFGVFLLPqlF 481
Cdd:cd15251  145 EGGLLYAFVGPAAAVVLVNMVIGILVFNKLVSRDGISdnamaSLWS---SCVVLPLLALTWMSAVLAMTDRRSVLFQ--I 219
                        250       260
                 ....*....|....*....|..
gi 755526951 482 LFTIFNSLYGFFLFLWFCSQKR 503
Cdd:cd15251  220 LFAVFDSLQGFVIVMVHCILRR 241
7tmB2_CELSR3 cd15993
Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of ...
243-499 7.35e-09

Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuronal migration and axon guidance in the CNS. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320659 [Multi-domain]  Cd Length: 254  Bit Score: 56.77  E-value: 7.35e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 243 LEYISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTLPTMprpVCKVLAAVLHYALLS 322
Cdd:cd15993    4 LAIVTYSSVSASLAALVLTFSVLTCLRGLKSNTRGIHSNIAAALFLSELLFLLGINRTENQF---LCTVVAILLHYFFLS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 323 SLTWMAIEGFNLYLFLGRVYN---AYIRRYLlklcMLGWGFPALlvllllmikssvygpcVTSLSKSQENgTGFQNVSMC 399
Cdd:cd15993   81 TFAWLFVQGLHIYRMQTEARNvnfGAMRFYY----AIGWGVPAI----------------ITGLAVGLDP-EGYGNPDFC 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 400 WIRSpmvHSILVMGYGGFTSL---FNLVVLAWALWILCRLRARE-KALSPWAYRDTAMVLGLtvLLGTTWTLAFFSFGVF 475
Cdd:cd15993  140 WISI---HDKLVWSFAGPIVVvivMNGVMFLLVARMSCSPGQKEtKKTSVLMTLRSSFLLLL--LISATWLFGLLAVNNS 214
                        250       260
                 ....*....|....*....|....
gi 755526951 476 LLPQLFLFTIFNSLYGFFLFLWFC 499
Cdd:cd15993  215 VLAFHYLHAILCCLQGLAVLLLFC 238
7tmB1_GLP2R cd15266
glucagon-like peptide-2 receptor, member of the class B family of seven-transmembrane G ...
240-513 1.01e-08

glucagon-like peptide-2 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Glucagon-like peptide-2 receptor (GLP2R) is a member of the glucagon receptor family of G protein-coupled receptors, which also includes glucagon receptor (GCGR) and GLP1R. GLP2R is activated by glucagon-like peptide 2, which is derived from the large proglucagon precursor. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. GLP2R belongs to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320394 [Multi-domain]  Cd Length: 280  Bit Score: 56.68  E-value: 1.01e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 240 QVPLEYISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLL------SSQMTLP----------- 302
Cdd:cd15266    1 LLTLQLIYTIGYSLSLISLSLALLILLLLRKLHCTRNYIHMNLFASFILRALAVLIkdivlySTYSKRPddetgwisyls 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 303 TMPRPVCKVLAAVLHYALLSSLTWMAIEGFNLYLFLGRVYNAYiRRYLLKLCMLGWGFPALLVLlllmikssvygPCVTS 382
Cdd:cd15266   81 EESSTSCRVAQVFMHYFVGANYFWLLVEGLYLHTLLVTAVLSE-RRLLKKYMLIGWGTPVLFVV-----------PWGVA 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 383 LSKSQENGTGFQNVSM-CW--IRSPMVHSILVMGYggftslFNLVVLAWALWilcRLRAREKALSPWAYRDTAMVLGLTV 459
Cdd:cd15266  149 KILLENTGCWGRNENMgIWwiIRGPILLCITVNFY------IFLKILKLLLS---KLKAQQMRFTDYKYRLARSTLVLIP 219
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 755526951 460 LLGTTWTLafFSF-------GVFLLPQLFLFTIFNSLYGFFLFLWFCsqkrYSDAEAKAEM 513
Cdd:cd15266  220 LLGIHEVV--FSFitdeqveGFSRHIRLFIQLTLSSFQGFLVAVLYC----FANGEVKAEL 274
7tmB1_NPR_B4_insect-like cd15260
insect neuropeptide receptor subgroup B4 and related proteins, member of the class B family of ...
245-411 1.57e-08

insect neuropeptide receptor subgroup B4 and related proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This subgroup includes a neuropeptide receptor found in Nilaparvata lugens (brown planthopper) and its closely related proteins from mollusks and annelid worms. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 320388 [Multi-domain]  Cd Length: 267  Bit Score: 55.74  E-value: 1.57e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 245 YISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTLP----TMPRPV-CKVLAAVLHYA 319
Cdd:cd15260    6 YVYIGGYSVSLIALIISLAIFFSFRSLRCTRITIHMNLFISFALNNLLWIVWYKLVVDnpevLLENPIwCQALHVLLQYF 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 320 LLSSLTWMAIEGfnLYLFLGRVYnAYIRRY-LLKLCM-LGWGFPallvllllMIKSSVYGPCVTSLSKsqengtgfqNVS 397
Cdd:cd15260   86 MVCNYFWMFCEG--LYLHTVLVV-AFISEKsLMRWFIaIGWGVP--------LVITAIYAGVRASLPD---------DTE 145
                        170
                 ....*....|....
gi 755526951 398 MCWIRSPMVHSILV 411
Cdd:cd15260  146 RCWMEESSYQWILI 159
7tmB2_BAI2 cd15988
brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 ...
241-401 1.77e-08

brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320654 [Multi-domain]  Cd Length: 291  Bit Score: 55.73  E-value: 1.77e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 241 VPLeyisFVGCSISIVASLLTILLYAQS-RKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTLPtmpRPVCKVLAAVLHYA 319
Cdd:cd15988    6 VPL----MIGCAVSCMALLILLAIYAAFwRFIRSERSIILLNFCLSILASNILILVGQSQTLS---KGVCTMTAAFLHFF 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 320 LLSSLTWMAIEGFNLYL-FLGRVYNAYIRRYLLklcMLGWGFPALlvllllmikssvygpcVTSLSKSQENGTGFQNVSM 398
Cdd:cd15988   79 FLSSFCWVLTEAWQSYLaVIGRMRTRLVRKRFL---CLGWGLPAL----------------VVAVSVGFTRTKGYGTASY 139

                 ...
gi 755526951 399 CWI 401
Cdd:cd15988  140 CWL 142
7tmB1_GlucagonR-like cd15929
glucagon receptor-like subfamily, member of the class B family of seven-transmembrane G ...
249-513 2.54e-08

glucagon receptor-like subfamily, member of the class B family of seven-transmembrane G protein-coupled receptors; This group represents the glucagon receptor family of G protein-coupled receptors, which includes glucagon receptor (GCGR), glucagon-like peptide-1 receptor (GLP1R), GLP2R, and closely related receptors. These receptors are activated by the members of the glucagon (GCG) peptide family including GCG, glucagon-like peptide 1 (GLP1), and GLP2, which are derived from the large proglucagon precursor. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. Receptors in this group belong to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 341353 [Multi-domain]  Cd Length: 279  Bit Score: 55.13  E-value: 2.54e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 249 VGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLL----------------------LNVTFLLSSQMTLPtmpr 306
Cdd:cd15929   10 VGYSLSLAALVLALAILLGLRKLHCTRNYIHANLFASFILralsvlvkdallprrysqkgdqDLWSTLLSNQASLG---- 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 307 pvCKVLAAVLHYALLSSLTWMAIEGFNLYLFLGRVY---NAYIRRYLLklcmLGWGFPALLVLLLLMIKssvygpcvtSL 383
Cdd:cd15929   86 --CRVAQVLMQYCVAANYYWLLVEGLYLHTLLVLAVfseRSIFRLYLL----LGWGAPVLFVVPWGIVK---------YL 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 384 SKSQENGTGFQNVSMCWI-RSPMVhsilvmgyggFTSLFNLVVLAWALWIL-CRLRAREKALSPWAYRDTAMVLGLTVLL 461
Cdd:cd15929  151 YENTGCWTRNDNMAYWWIiRLPIL----------LAILINFFIFVRILKILvSKLRANQMCKTDYKFRLAKSTLTLIPLL 220
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 755526951 462 GTTWTLafFSF-------GVFLLPQLFLFTIFNSLYGFFLFLWFCsqkrYSDAEAKAEM 513
Cdd:cd15929  221 GVHEVV--FAFvtdeqarGTLRFIKLFFELFLSSFQGLLVAVLYC----FANKEVQSEL 273
7tmB2_CELSR2 cd15992
Cadherin EGF LAG seven-pass G-type receptor 2, member of the class B2 family of ...
241-496 4.62e-08

Cadherin EGF LAG seven-pass G-type receptor 2, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320658  Cd Length: 255  Bit Score: 54.06  E-value: 4.62e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 241 VPLEYISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLLS-SQMTLPTmprpVCKVLAAVLHYA 319
Cdd:cd15992    2 LPLKTLTWSSVGVTLGFLLLTFLFLLCLRALRSNKTSIRKNGATALFLSELVFILGiNQADNPF----ACTVIAILLHFF 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 320 LLSSLTWMAIEGFNLYLFLGRV--YNAYIRRYLLklcMLGWGFPALlvllllmikssvygpcVTSLSKSQENgTGFQNVS 397
Cdd:cd15992   78 YLCTFSWLFLEGLHIYRMLSEVrdINYGPMRFYY---LIGWGVPAF----------------ITGLAVGLDP-EGYGNPD 137
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 398 MCWIRspmVHSILVMGYGGFTSL-FNLVVLAWALWILCRLRAREKALSPWAYRDTAMVLGLTVLL--GTTWTLAFFSFGV 474
Cdd:cd15992  138 FCWLS---IYDTLIWSFAGPVAFaVSMNVFLYILSSRASCSAQQQSFEKKKGPVSGLRTAFTVLLlvSVTCLLALLSVNS 214
                        250       260
                 ....*....|....*....|..
gi 755526951 475 FLLPQLFLFTIFNSLYGFFLFL 496
Cdd:cd15992  215 DVILFHYLFAGFNCLQGPFIFL 236
7tmB1_GlucagonR-like_1 cd15985
uncharacterized group of glucagon receptor-like proteins, member of the class B family of ...
249-513 4.73e-08

uncharacterized group of glucagon receptor-like proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This group consists of uncharacterized proteins with similarity to members of the glucagon receptor family of G protein-coupled receptors, which include glucagon receptor (GCGR), and glucagon-like peptide-1 receptor (GLP1R), and GLP2R. The glucagon receptors are activated by the members of the glucagon (GCG) peptide family including GCG, glucagon-like peptide 1 (GLP1), and GLP2, which are derived from the large proglucagon precursor. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. Receptors in this group belong to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320651 [Multi-domain]  Cd Length: 280  Bit Score: 54.55  E-value: 4.73e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 249 VGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTLPTMPRPV-----------------CKV 311
Cdd:cd15985   10 VGYTLSLLTLVSALLILTSIRKLHCTRNYIHANLFASFILRAVSVIVKDTLLERRWGREImrvadwgellshkaaigCRM 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 312 LAAVLHYALLSSLTWMAIEGFNLY-LFLGRVYNAYiRRYLLKLCmLGWGFPALLVLLLLMIKssvygpcvtSLSKSQENG 390
Cdd:cd15985   90 AQVVMQYCILANHYWFFVEAVYLYkLLIGAVFSEK-NYYLLYLY-LGWGTPVLFVVPWMLAK---------YLKENKECW 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 391 TGFQNVSMCW-IRSPMVhsilvmgyggFTSLFNLVVLAWAL-WILCRLRAREKALSPWAYRDTAMVLGLTVLLGTTWTLA 468
Cdd:cd15985  159 ALNENMAYWWiIRIPIL----------LASLINLLIFMRILkVILSKLRANQKGYADYKLRLAKATLTLIPLFGIHEVVF 228
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 755526951 469 FF-----SFGVFLLPQLFLFTIFNSLYGFFLFLWFCsqkrYSDAEAKAEM 513
Cdd:cd15985  229 IFatdeqTTGILRYIKVFFTLFLNSFQGFLVAVLYC----FANKEVKSEL 274
7tmB1_DH_R cd15263
insect diuretic hormone receptors, member of the class B family of seven-transmembrane G ...
246-499 9.32e-08

insect diuretic hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes G protein-coupled receptors that specifically bind to insect diuretic hormones found in Manduca sexta (moth) and Acheta domesticus (the house cricket), among others. Insect diuretic hormone and their GPCRs play critical roles in the regulation of water and ion balance. Thus they are attractive targets for developing new insecticides. Activation of the diuretic hormone receptors stimulate adenylate cyclase, thereby increasing cAMP levels in Malpighian tube. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of Gs family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx.


Pssm-ID: 320391 [Multi-domain]  Cd Length: 272  Bit Score: 53.53  E-value: 9.32e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 246 ISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTL-PTMPRPVCKVLAAVLHYALLSSL 324
Cdd:cd15263    7 IYFIGYSLSLVALSLALWIFLYFKDLRCLRNTIHTNLMFTYILADLTWILTLTLQVsIGEDQKSCIILVVLLHYFHLTNF 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 325 TWMAIEGFNLYLFLGRVYNAYIRRYLLKLCmLGWGFPALLVLLLLMIKS--SVYGPCVTSLSKSQENGTGFQNVSMCWIR 402
Cdd:cd15263   87 FWMFVEGLYLYMLVVETFSGENIKLRVYAF-IGWGIPAVVIVIWAIVKAlaPTAPNTALDPNGLLKHCPWMAEHIVDWIF 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 403 spMVHSILVMgyggftsLFNLVVLAWALWIL-CRLRAREKALSPWAYRDTAMVLGLTVLLGTTWTLAFF------SFGVF 475
Cdd:cd15263  166 --QGPAILVL-------AVNLVFLVRIMWVLiTKLRSANTVETQQYRKAAKALLVLIPLLGITYILVIAgptegiAANIF 236
                        250       260
                 ....*....|....*....|....
gi 755526951 476 LLPQLFLFtifnSLYGFFLFLWFC 499
Cdd:cd15263  237 EYVRAVLL----STQGFTVALFYC 256
7tmB2_BAI1 cd15990
brain-specific angiogenesis inhibitor 1, a group VII adhesion GPCR, member of the class B2 ...
249-503 9.57e-07

brain-specific angiogenesis inhibitor 1, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320656  Cd Length: 267  Bit Score: 50.37  E-value: 9.57e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 249 VGCSISIVASLLTILLYAQSRKQSDST-TRIHMNLNGSVLLLNVTFLLSSQMTlptMPRPVCKVLAAVLHYALLSSLTWM 327
Cdd:cd15990   13 VGCGVSSLTLLLLIIIYVSVWRYIRSErSVILINFCLSIISSNALILIGQTQT---RNKVVCTLVAAFLHFFFLSSFCWV 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 328 AIEGFNLYLFL-GRVYNAYIRRYLLklcMLGWGFPALlvllllmikssvygpcVTSLSKSQENGTGFQNVSMCWIRspmV 406
Cdd:cd15990   90 LTEAWQSYMAVtGRLRNRIIRKRFL---CLGWGLPAL----------------VVAISVGFTKAKGYGTVNYCWLS---L 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 407 HSILVMGYGGFTSLFNLVVLAWALWILCRLRARE-------KALSPWAYRDTAMVLGLTVLLGTTWTLAFFSFGVFLLPq 479
Cdd:cd15990  148 EGGLLYAFVGPAAAVVLVNMVIGILVFNKLVSKDgitdkklKERAGASLWSSCVVLPLLALTWMSAVLAITDRRSALFQ- 226
                        250       260
                 ....*....|....*....|....
gi 755526951 480 lFLFTIFNSLYGFFLFLWFCSQKR 503
Cdd:cd15990  227 -ILFAVFDSLEGFVIVMVHCILRR 249
7tmB1_CRF-R1 cd15445
corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane ...
246-499 3.89e-06

corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320561 [Multi-domain]  Cd Length: 265  Bit Score: 48.39  E-value: 3.89e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 246 ISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTLPTMPRP---VCKVLAAVLHYALLS 322
Cdd:cd15445    7 INYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLITAFILRNATWFVVQLTMSPEVHQSnvvWCRLVTAAYNYFHVT 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 323 SLTWMAIEGFNLYLFLGRVYNAYIRRYLLKLCmLGWGFPAllvllllmikssvygPCVTSLSKsqenGTGFQNVSMCWI- 401
Cdd:cd15445   87 NFFWMFGEGCYLHTAIVLTYSTDKLRKWMFIC-IGWCIPF---------------PIIVAWAI----GKLYYDNEKCWFg 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 402 -----------RSPMVHSILVmgygGFTSLFNLVVLawalwILCRLRAREKALSPWAYRDTAMVLGLTVLLGTTWTLAFF 470
Cdd:cd15445  147 kragvytdyiyQGPMILVLLI----NFIFLFNIVRI-----LMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFV 217
                        250       260       270
                 ....*....|....*....|....*....|...
gi 755526951 471 SFGVFLLPQLfLFTIFN----SLYGFFLFLWFC 499
Cdd:cd15445  218 NPGEDEISRI-VFIYFNsfleSFQGFFVSVFYC 249
7tmB1_Secretin_R-like cd15930
secretin receptor-like group of hormone receptors, member of the class B family of ...
249-362 1.80e-05

secretin receptor-like group of hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group represents G protein-coupled receptors for structurally similar peptide hormones that include secretin, growth-hormone-releasing hormone (GHRH), pituitary adenylate cyclase activating polypeptide (PACAP), and vasoactive intestinal peptide (VIP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Secretin, a polypeptide secreted by entero-endocrine S cells in the small intestine, is involved in maintaining body fluid balance. This polypeptide regulates the secretion of bile and bicarbonate into the duodenum from the pancreatic and biliary ducts, as well as regulates the duodenal pH by the control of gastric acid secretion. Studies with secretin receptor-null mice indicate that secretin plays a role in regulating renal water reabsorption. Secretin mediates its biological actions by elevating intracellular cAMP via G protein-coupled secretin receptors, which are expressed in the brain, pancreas, stomach, kidney, and liver. GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. All B1 subfamily GPCRs are able to increase intracellular cAMP levels by coupling to adenylate cyclase via a stimulatory Gs protein. However, depending on its cellular location, some members of subfamily B1 are also capable of coupling to additional G proteins such as G(i/o) and/or G(q) proteins, thereby leading to activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320596 [Multi-domain]  Cd Length: 268  Bit Score: 46.66  E-value: 1.80e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 249 VGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGS-------VLLLNVTFLLSSQMTLPTMPRPVCKVLAAVLHYALL 321
Cdd:cd15930   10 VGYSLSLTSLTTAMIILCLFRKLHCTRNYIHMNLFVSfilraiaVFIKDAVLFSSEDVDHCFVSTVGCKASMVFFQYCVM 89
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 755526951 322 SSLTWMAIEGFNLYLFLGRVYnAYIRRYLLKLCMLGWGFPA 362
Cdd:cd15930   90 ANFFWLLVEGLYLHTLLVISF-FSERRYFWWYVLIGWGAPT 129
7tmB1_GHRHR cd15270
growth-hormone-releasing hormone receptor, member of the class B family of seven-transmembrane ...
246-361 3.40e-05

growth-hormone-releasing hormone receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Growth hormone-releasing hormone receptor (GHRHR) is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, pituitary adenylate cyclase activating polypeptide (PACAP), and vasoactive intestinal peptide. These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. GHRH is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. GHRHR is found in mammals as well as zebrafish and chicken, whereas the GHRHR type 2, an ortholog of the GHRHR, has only been identified in ray-finned fish, chicken and Xenopus. Xenopus laevis GHRHR2 has been shown to interact with both endogenous GHRH and PACAP-related peptide (PRP).


Pssm-ID: 320398 [Multi-domain]  Cd Length: 268  Bit Score: 45.56  E-value: 3.40e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 246 ISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTLP-------TMPRPVCKVLAAVLHY 318
Cdd:cd15270    7 IYTVGYSISIVSLCVAVAILVAFRRLHCPRNYIHIQLFFTFILKAIAVFIKDAALFQeddtdhcSMSTVLCKVSVVFCHY 86
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 755526951 319 ALLSSLTWMAIEGFNLYLFLGRVYnAYIRRYLLKLCMLGWGFP 361
Cdd:cd15270   87 CVMTNFFWLLVEAVYLNCLLASSF-PRGKRYFWWLVLLGWGLP 128
7tmB2_GPR144 cd15255
orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G ...
243-496 7.36e-05

orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR144 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR133. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320383 [Multi-domain]  Cd Length: 263  Bit Score: 44.46  E-value: 7.36e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 243 LEYISFVGCSISIVASLLTILLY-AQSRKQSDSTTrIHMNLNGSvLLLNVTFLLSSQmtLPTMPRPVCKVLAAVLHYALL 321
Cdd:cd15255    4 LRTLSFIGCGVSLCALIVTFILFlAVGVPKSERTT-VHKNLIFA-LAAAEFLLMFSE--WAKGNQVACWAVTALLHLFFL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 322 SSLTWMAIEGFNLYLFLGRVYNAYIRRYLLKLcMLGWGFPALLvllllmikssVYGPCVTSLSKSQENGtgfqnvsMCWI 401
Cdd:cd15255   80 AAFSWMLVEGLLLWSKVVAVNMSEDRRMKFYY-VTGWGLPVVI----------VAVTLATSFNKYVADQ-------HCWL 141
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 402 RspmVHSILVMGYGG---FTSLFNLVVLAWALWI-LCRLRAREKALSP------------WAyrDTAMVLGLTVLLGTTW 465
Cdd:cd15255  142 N---VQTDIIWAFVGpvlFVLTVNTFVLFRVVMVtVSSARRRAKMLTPssdlekqigiqiWA--TAKPVLVLLPVLGLTW 216
                        250       260       270
                 ....*....|....*....|....*....|..
gi 755526951 466 TLAFFsfgVFLLPQL-FLFTIFNSLYGFFLFL 496
Cdd:cd15255  217 LCGVL---VHLSDVWaYVFITLNSFQGLYIFL 245
7tmB1_PACAP-R1 cd15987
pituitary adenylate cyclase-activating polypeptide type 1 receptor, member of the class B ...
249-411 7.55e-05

pituitary adenylate cyclase-activating polypeptide type 1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Pituitary adenylate cyclase-activating polypeptide type 1 receptor (PACAP-R1) is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and vasoactive intestinal peptide (VIP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. PACAP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level.


Pssm-ID: 320653 [Multi-domain]  Cd Length: 268  Bit Score: 44.57  E-value: 7.55e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 249 VGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLL----------SSQMTLPTMPrpvCKVLAAVLHY 318
Cdd:cd15987   10 VGYSTSLVSLTTAMVILCRFRKLHCTRNFIHMNLFVSFILRAISVFIkdgvlyaeqdSDHCFVSTVE---CKAVMVFFHY 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 319 ALLSSLTWMAIEGFNLYLFLGRVYNAYiRRYLLKLCMLGWGFPALlvllllmikssvygpCVT--SLSKSQENGTGF--- 393
Cdd:cd15987   87 CVMSNYFWLFIEGLYLFTLLVETFFPE-RRYFYWYTIIGWGTPTI---------------CVTvwAVLRLHFDDTGCwdm 150
                        170       180
                 ....*....|....*....|
gi 755526951 394 -QNVSMCW-IRSPMVHSILV 411
Cdd:cd15987  151 nDNTALWWvIKGPVVGSIMI 170
7tmB1_CRF-R2 cd15446
corticotropin-releasing factor receptor 2, member of the class B family of seven-transmembrane ...
246-499 2.81e-04

corticotropin-releasing factor receptor 2, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320562 [Multi-domain]  Cd Length: 264  Bit Score: 42.64  E-value: 2.81e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 246 ISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLLSSQM--TLPTMPRPVCKVLAAVLHYALLSS 323
Cdd:cd15446    7 INYLGHCISVGALVVAFLLFLCLRSIRCLRNIIHWNLITTFILRNVMWFLLQMIdhNIHESNEVWCRCITTIYNYFVVTN 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 324 LTWMAIEGFNLYLFLGRVYNAYIRRYLLKLcMLGWGFPAllvllllmikssvygPCVTSLSKsqenGTGFQNVSMCWI-- 401
Cdd:cd15446   87 FFWMFVEGCYLHTAIVMTYSTDKLRKWVFL-FIGWCIPC---------------PIIVAWAI----GKLYYENEQCWFgk 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 402 ----------RSPMVHSILVmgygGFTSLFNLVVLawalwILCRLRAREKALSPWAYRDTAMVLGLTVLLGTTWTLAFFS 471
Cdd:cd15446  147 epgkyidyiyQGPVILVLLI----NFVFLFNIVRI-----LMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVN 217
                        250       260       270
                 ....*....|....*....|....*....|..
gi 755526951 472 FGVFLLPQLfLFTIFNSLY----GFFLFLWFC 499
Cdd:cd15446  218 PGEDDISQI-VFIYFNSFLqsfqGFFVSVFYC 248
7tmB1_GHRHR2 cd15271
growth-hormone-releasing hormone receptor type 2, member of the class B family of ...
249-514 3.90e-04

growth-hormone-releasing hormone receptor type 2, member of the class B family of seven-transmembrane G protein-coupled receptors; Growth hormone-releasing hormone receptor type 2 (GHRHR2) is found in non-mammalian vertebrates such as chicken and frog. It is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, pituitary adenylate cyclase activating polypeptide (PACAP), vasoactive intestinal peptide, and mammalian growth hormone-releasing hormone. These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Mammalian GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. Mammalian GHRH is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. GHRHR is found in mammals as well as zebrafish and chicken, whereas the GHRHR type 2, an ortholog of the GHRHR, has only been identified in ray-finned fish, chicken and Xenopus. Xenopus laevis GHRHR2 has been shown to interact with both endogenous GHRH and PACAP-related peptide (PRP).


Pssm-ID: 320399 [Multi-domain]  Cd Length: 267  Bit Score: 42.41  E-value: 3.90e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 249 VGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGS-------VLLLNVTFLLSSQMTLPTMPRPVCKVLAAVLHYALL 321
Cdd:cd15271   10 VGYGTSLTSLITAVLIFCTFRKLHCTRNYIHINLFVSfilralaVFIKDAVLFADESVDHCTMSTVACKAAVTFFQFCVL 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 322 SSLTWMAIEGFNLYLFLGRVYnAYIRRYLLKLCMLGWGFPALLVllllmikssvygpCVTSLSKSQENGTGfqnvsmCW- 400
Cdd:cd15271   90 ANFFWLLVEGMYLQTLLLLTF-TSDRKYFWWYILIGWGAPSVTV-------------TVWVLTRLQYDNRG------CWd 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 401 ---------IRSPMVHSILVmgygGFTSLFNLVVLawalwILCRLRARE--KALSPWAYRDTAMVLGLTVLLGTTWTL-A 468
Cdd:cd15271  150 dlesriwwiIKTPILLSVFV----NFLIFINVIRI-----LVQKLKSPDvgGNDTSHYMRLAKSTLLLIPLFGVHYVVfA 220
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 755526951 469 FFSFGVFLLPQLFLFTIFNSLYGFFLFLWFCsqkrYSDAEAKAEME 514
Cdd:cd15271  221 FFPEHVGVEARLYFELVLGSFQGFIVALLYC----FLNGEVQAEIK 262
7tmB1_PTH1R cd15984
parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G ...
243-514 5.05e-04

parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone (PTH) receptor family has three subtypes: PTH1R, PTH2R and PTH3R. PTH1R is expressed in bone and kidney and is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to G(s)-protein that in turn activates adenylate cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple intracellular signaling pathways. PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. PTH3R is found in chicken and fish, but it is absent in mammals. The PTH receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320650 [Multi-domain]  Cd Length: 290  Bit Score: 42.24  E-value: 5.05e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 243 LEYISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTF-----LLSSQMTLPTMPRPV--------- 308
Cdd:cd15984    4 LYLIYTVGYSISLGSLTVAVLILGYFRRLHCTRNYIHMHLFLSFMLRAVSIfvkdaVLYSGSALEEMERITeedlksite 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 309 -----------CKVLAAVLHYALLSSLTWMAIEGFNLYLFlgrVYNAYI--RRYLLKLCMLGWGFPALLVLLLLMIKSSV 375
Cdd:cd15984   84 appadkaqfvgCKVAVTFFLYFLATNYYWILVEGLYLHSL---IFMAFFseKKYLWGFTLFGWGLPAVFVTIWASVRATL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 376 YGPCVTSLSKSqengtgfqnvSMCWI-RSPMVHSILVmgygGFTSLFNLV-VLAWALwilcRLRAREKALSPWAYRD-TA 452
Cdd:cd15984  161 ADTGCWDLSAG----------NLKWIiQVPILAAIVV----NFILFINIVrVLATKL----RETNAGRCDTRQQYRKlLK 222
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 755526951 453 MVLGLTVLLGTTWtLAFFSF------GVFLLPQLFLFTIFNSLYGFFLFLWFCsqkrYSDAEAKAEME 514
Cdd:cd15984  223 STLVLMPLFGVHY-IVFMAMpytevsGILWQVQMHYEMLFNSFQGFFVAIIYC----FCNGEVQAEIK 285
7tmB1_PDFR cd15261
The pigment dispersing factor receptor, member of the class B seven-transmembrane G ...
245-361 5.18e-04

The pigment dispersing factor receptor, member of the class B seven-transmembrane G protein-coupled receptors; The pigment dispersing factor receptor (PDFR) is a G protein-coupled receptor that binds the circadian clock neuropeptide PDF, a functional ortholog of the mammalian vasoactive intestinal peptide (VIP), on the pacemaker neurons. The PDFR is implicated in regulating flight circuit development and in modulating acute flight In Drosophila melanogaster. The PDFR activation stimulates adenylate cyclase, thereby increasing cAMP levels in many different pacemakers, and the receptor signaling has been shown to regulate behavioral circadian rhythms and geotaxis in Drosophila. The PDFR belongs to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. . These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. They play key roles in hormone homeostasis in mammals and are promising drug targets in various human diseases including diabetes, osteoporosis, obesity, neurodegenerative conditions (Alzheimer###s and Parkinson's), cardiovascular disease, migraine, and psychiatric disorders (anxiety, depression).


Pssm-ID: 320389 [Multi-domain]  Cd Length: 282  Bit Score: 41.97  E-value: 5.18e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 245 YISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLL-------------------SSQMTLPTMP 305
Cdd:cd15261    6 TLEIVGLCLSLVSLIISLFIFSYFRTLRNHRTRIHKNLFLAILLQVIIRLVlyidqaitrsrgshtnaatTEGRTINSTP 85
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 755526951 306 RpVCKVLAAVLHYALLSSLTWMAIEGFNLY------LFLGRVynayirrYLLKLCMLGWGFP 361
Cdd:cd15261   86 I-LCEGFYVLLEYAKTVMFMWMFIEGLYLHniivvsVFSGKP-------NYLFYYILGWGIP 139
7tmB2_GPR124-like_Adhesion_III cd15259
orphan GPR124 and related proteins, group III adhesion GPCRs, member of class B2 family of ...
242-503 6.61e-04

orphan GPR124 and related proteins, group III adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group III adhesion GPCRs include orphan GPR123, GPR124, GPR125, and their closely related proteins. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. GPR123 is predominantly expressed in the CNS including thalamus, brain stem and regions containing large pyramidal cells. GPR124, also known as tumor endothelial marker 5 (TEM5), is highly expressed in tumor vessels and in the vasculature of the developing embryo. GPR124 is essentially required for proper angiogenic sprouting into neural tissue, CNS-specific vascularization, and formation of the blood-brain barrier. GPR124 also interacts with the PDZ domain of DLG1 (discs large homolog 1) through its PDZ-binding motif. Recently, studies of double-knockout mice showed that GPR124 functions as a co-activator of Wnt7a/Wnt7b-dependent beta-catenin signaling in brain endothelium. Furthermore, WNT7-stimulated beta-catenin signaling is regulated by GPR124's intracellular PDZ binding motif and leucine-rich repeats (LRR) in its N-terminal extracellular domain. GPR125 directly interacts with dishevelled (Dvl) via its intracellular C-terminus, and together, GPR125 and Dvl recruit a subset of planar cell polarity (PCP) components into membrane subdomains, a prerequisite for activation of Wnt/PCP signaling. Thus, GPR125 influences the noncanonical WNT/PCP pathway, which does not involve beta-catenin, through interacting with and modulating the distribution of Dvl.


Pssm-ID: 320387 [Multi-domain]  Cd Length: 260  Bit Score: 41.59  E-value: 6.61e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 242 PLEYISFVGCSISIVASLLTILLYAQSRkqsdSTTRI-----HMNLNGSVLLLNVTFLLSSQMTLPTMPrPVCKVLAAVL 316
Cdd:cd15259    3 LLHPVVYAGAALCLLCLLATIITYIVFH----RLIRIsrkgrHMLVNLCLHLLLTCVVFVGGINRTANQ-LVCQAVGILL 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 317 HYALLSSLTWMAIEGFNLY--------LFLGRVYNAYIRRYLLKLCMLGWGFPALLvllllmikssvygpCVTSLSKSQE 388
Cdd:cd15259   78 HYSTLCTLLWVGVTARNMYkqvtktakPPQDEDQPPRPPKPMLRFYLIGWGIPLII--------------CGITAAVNLD 143
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 389 NgtgFQNVSMCWirspMVHSILVMGYGGFTSLFNLVVLAWALWILCRLraREKALSPWAY-RDTAMVLgltVLLGTTWTL 467
Cdd:cd15259  144 N---YSTYDYCW----LAWDPSLGAFYGPAALIVLVNCIYFLRIYCQL--KGAPVSFQSQlRGAVITL---FLYVAMWAC 211
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 755526951 468 AFFSFGVFLLPQL---FLFTIFNSLYGFFLFLWFCSQKR 503
Cdd:cd15259  212 GALAVSQRYFLDLvfsCLYGATCSSLGLFVLIHHCLSRE 250
7tmB2_GPR111_115 cd15994
orphan adhesion receptors GPR111 and GPR115, member of the class B2 family of ...
243-497 7.08e-04

orphan adhesion receptors GPR111 and GPR115, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR111 and GPR115 are highly homologous orphan receptors that belong to group VI adhesion-GPCRs along with GPR110, GPR113, and GPR116. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS. Both GPR111 and GPR5 are present only in land-living animals and are predominantly expressed in the developing skin.


Pssm-ID: 320660 [Multi-domain]  Cd Length: 267  Bit Score: 41.36  E-value: 7.08e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 243 LEYISFVGCSISIVASLLTILLYAQSRKQSDSTTRIHM------NLNGSVLLLNVTFLLSSQMTLPTMPRPVCKVLAAVL 316
Cdd:cd15994    4 LDYITRIGLGLSIFSLALCLTIEAVVWSHVTKTEITYMrhvcivNIATSLLIADVWFILASIVHNTALNYPLCVAATFFL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 317 HYALLSSLTWMAIEGFNLYLFLGRVYNAYIR-RYLLKLCMLGWGFPALLVLLLLMIkssvygpcvtslsksQENGTGFQN 395
Cdd:cd15994   84 HFFYLSLFFWMLTKALLILYGILLVFFKITKsVFIATAFSIGYGCPLVIAVLTVAI---------------TEPKKGYLR 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 396 VSMCWIRSPMVHSILVMGYGGFTSL-FNLVVLawalwILCRLRAREKALSPWAYRDTAMVLG-------LTVLLGTTWtl 467
Cdd:cd15994  149 PEACWLNWDETKALLAFIIPALSIVvVNLIVV-----GVVVVKTQRSSIGESCKQDVSNIIRisknvaiLTPLLGLTW-- 221
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 755526951 468 affSFGVFL------LPQLFLFTIFNSLYGFFLFLW 497
Cdd:cd15994  222 ---GFGLATiidsrsLPFHIIFALLNAFQGFFILLF 254
7tmB2_GPR113 cd15253
orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G ...
243-503 7.41e-04

orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR113 is an orphan receptor that belongs to group VI adhesion-GPCRs along with GPR110, GPR111, GPR115, and GPR116. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR113 contains a hormone binding domain and one EGF (epidermal grown factor) domain, and is primarily expressed in a subset of taste receptor cells. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320381 [Multi-domain]  Cd Length: 271  Bit Score: 41.67  E-value: 7.41e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 243 LEYISFVGCSISIVASLLTILLYA---QSRKQSDSTTRIHM---NLNGSVLLLNVTFLLSSQMTlPTMPRPVCKVLAAVL 316
Cdd:cd15253    4 LDFLSQVGLGASILALLLCLGIYRlvwRSVVRNKISYFRHMtlvNIAFSLLLADTCFLGATFLS-AGHESPLCLAAAFLC 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 317 HYALLSSLTWMAIEGFNLYLFLGRVYNAYIRRYLLKLCM-LGWGFPALLVLLLLmiksSVYGPCVTSLSKSqengtgfqn 395
Cdd:cd15253   83 HFFYLATFFWMLVQALMLFHQLLFVFHQLAKRSVLPLMVtLGYLCPLLIAAATV----AYYYPKRQYLHEG--------- 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 396 vsMCWIRSPMVHSILVMGYGGFTSLFNLVVLAWALWILCRLRAREKalSPWAYRDTAM-----VLGLTVLLGTTWtlaff 470
Cdd:cd15253  150 --ACWLNGESGAIYAFSIPVLAIVLVNLLVLFVVLMKLMRPSVSEG--PPPEERKALLsifkaLLVLTPVFGLTW----- 220
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 755526951 471 SFGVFLLPQL------FLFTIFNSLYGFFLFLWFCSQKR 503
Cdd:cd15253  221 GLGVATLTGEssqvshYGFAILNAFQGVFILLFGCLMDK 259
7tmB1_GCGR cd15267
glucagon receptor, member of the class B family of seven-transmembrane G protein-coupled ...
249-499 1.12e-03

glucagon receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Glucagon receptor (GCGR) is a member of the glucagon receptor family of G protein-coupled receptors, which also includes glucagon-like peptide-1 receptor (GLP1R) and GLP2R. GCGR is activated by glucagon, which is derived from the large proglucagon precursor. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. GCGR belongs to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320395 [Multi-domain]  Cd Length: 281  Bit Score: 40.96  E-value: 1.12e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 249 VGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLL----------------SSQMTLPTMPRPVCKVL 312
Cdd:cd15267   12 VGYSLSLGALLLALAILGGFSKLHCMRNAIHMNLFASFILKASSVLVidgllrtrysqkieddLSSTWLSDEAVAGCRVA 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 313 AAVLHYALLSSLTWMAIEGFNLYLFLGRVYNAYIRRYLLKLCmLGWGFPALLVLLLLMIKssvygpcvtSLSKSQENGTG 392
Cdd:cd15267   92 AVFMQYGIVANYCWLLVEGIYLHNLLVLAVFPERSYFSLYLC-IGWGAPALFVVPWVVVK---------CLYENVQCWTS 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 393 FQNVSMCWI-RSPMVHSILVmgyggftslfNLVVLAWALWIL-CRLRAREKALSPWAYRDTAMVLGLTVLLGTTWTLAFF 470
Cdd:cd15267  162 NDNMGFWWIlRFPVFLAILI----------NFFIFVRIIQILvSKLRARQMHYTDYKFRLAKSTLTLIPLLGIHEVVFAF 231
                        250       260       270
                 ....*....|....*....|....*....|....
gi 755526951 471 -----SFGVFLLPQLFLFTIFNSLYGFFLFLWFC 499
Cdd:cd15267  232 vtdehAQGTLRSAKLFFDLFLSSFQGLLVAVLYC 265
7tmB1_secretin cd15275
secretin receptor, member of the class B family of seven-transmembrane G protein-coupled ...
249-362 3.68e-03

secretin receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Secretin receptor is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include vasoactive intestinal peptide (VIP), growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors, and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Secretin, a polypeptide secreted by entero-endocrine S cells in the small intestine, is involved in maintaining body fluid balance. This polypeptide regulates the secretion of bile and bicarbonate into the duodenum from the pancreatic and biliary ducts, as well as regulates the duodenal pH by the control of gastric acid secretion. Studies with secretin receptor-null mice indicate that secretin plays a role in regulating renal water reabsorption. Secretin mediates its biological actions by elevating intracellular cAMP via G protein-coupled secretin receptor, which is expressed in the brain, pancreas, stomach, kidney, and liver.


Pssm-ID: 320403 [Multi-domain]  Cd Length: 271  Bit Score: 39.34  E-value: 3.68e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 249 VGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVT------FLLSSQMTLPTMPRPV-CKVLAAVLHYALL 321
Cdd:cd15275   10 VGYSVSLVSLAIALAILCSFRRLHCTRNYIHMQLFLSFILRAISifikdaVLFSSEDDNHCDIYTVgCKVAMVFSNYCIM 89
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 755526951 322 SSLTWMAIEGFNLYLFLGRVYNAyIRRYLLKLCMLGWGFPA 362
Cdd:cd15275   90 ANYSWLLVEGLYLHSLLSISFFS-ERKHLWWYIALGWGSPL 129
7tmB1_PTH-R_related cd15272
invertebrate parathyroid hormone-related receptors, member of the class B family of ...
249-361 3.72e-03

invertebrate parathyroid hormone-related receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes parathyroid hormone (PTH)-related receptors found in invertebrates such as mollusks and annelid worms. The PTH family receptors are members of the B1 subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. The parathyroid hormone type 1 receptor (PTH1R) is found in all vertebrate species and is activated by two polypeptide ligands: parathyroid hormone (PTH), an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to G(s)- protein that in turn activates adenylyl cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple signaling pathways.


Pssm-ID: 320400 [Multi-domain]  Cd Length: 285  Bit Score: 39.29  E-value: 3.72e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 249 VGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVTFLLSSQMTLPTMPRPV-------------------- 308
Cdd:cd15272   10 IGYGLSLVSLLIAVIIMLYFKKLHCPRNTIHINLFVSFILRAVLSFIKENLLVQGVGFPGdvyydsngviefkdegshwe 89
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 755526951 309 CKVLAAVLHYALLSSLTWMAIEGFNLY-LFLGRVY--NAYIRRYLLklcmLGWGFP 361
Cdd:cd15272   90 CKLFFTMFNYILGANYMWIFVEGLYLHmLIFVAVFseNSRVKWYIL----LGWLSP 141
7tmB1_VIP-R1 cd15269
vasoactive intestinal polypeptide (VIP) receptor 1, member of the class B family of ...
249-362 8.57e-03

vasoactive intestinal polypeptide (VIP) receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors; Vasoactive intestinal peptide (VIP) receptor 1 is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. VIP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. However, depending on its cellular location, VIP-R1 is also capable of coupling to additional G proteins such as G(q) protein, thus leading to the activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320397 [Multi-domain]  Cd Length: 268  Bit Score: 38.30  E-value: 8.57e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 249 VGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGS-------VLLLNVTFLLSSQMTLPTMPRPVCKVLAAVLHYALL 321
Cdd:cd15269   10 IGHSLSLISLTAAMIILCLFRKLHCTRNYIHMHLFMSfilraiaVFIKDAVLFESGEEDHCSVASVGCKAAMVFFQYCIM 89
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 755526951 322 SSLTWMAIEGFNLYLFLGRVYNAYiRRYLLKLCMLGWGFPA 362
Cdd:cd15269   90 ANFFWLLVEGLYLHTLLAVSFFSE-RKYFWWYILIGWGAPS 129
7tmB1_VIP-R2 cd15986
vasoactive intestinal polypeptide (VIP) receptor 2, member of the class B family of ...
249-362 9.23e-03

vasoactive intestinal polypeptide (VIP) receptor 2, member of the class B family of seven-transmembrane G protein-coupled receptors; Vasoactive intestinal peptide (VIP) receptor 2 is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. VIP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. However, depending on its cellular location, VIP-R1 is also capable of coupling to additional G proteins such as G(q) protein, thus leading to the activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320652 [Multi-domain]  Cd Length: 269  Bit Score: 38.25  E-value: 9.23e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526951 249 VGCSISIVASLLTILLYAQSRKQSDSTTRIHMNLNGSVLLLNVT------FLLSSQMTLPTMPRPV---CKVLAAVLHYA 319
Cdd:cd15986   10 LGHSVSLIALTTGSTILCLFRKLHCTRNYIHLNLFFSFILRAISvlvkddILYSSSNTEHCTVPPSligCKVSLVILQYC 89
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 755526951 320 LLSSLTWMAIEGFNLYLFLGRVYNAyiRRYLLKLCMLGWGFPA 362
Cdd:cd15986   90 IMANFYWLLVEGLYLHTLLVVIFSE--NRHFIVYLLIGWGIPT 130
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH