|
Name |
Accession |
Description |
Interval |
E-value |
| ADAMTS_spacer1 |
pfam05986 |
ADAM-TS Spacer 1; This domain represents the Spacer-1 region from the ADAM-TS and ADAM-TS-like ... |
542-655 |
6.50e-29 |
|
ADAM-TS Spacer 1; This domain represents the Spacer-1 region from the ADAM-TS and ADAM-TS-like proteins. ADAM-TS (A Disintegrin and Metalloproteinase with Thrombospondin Motifs) is closely related to the ADAM family (A Disintegrin and Metalloproteinase) and is a subfamily of the metalloprotease family, sharing a high degree of sequence similarity and conserved domain organization among its members. Members of the ADAM-TS family have been implicated in a range of diseases. ADAM-TS-like proteins lack a metalloprotease domain. They resides in the ECM and have regulatory roles. Examples of ADAM-TS-like proteins are papilin and punctin.
:
Pssm-ID: 461796 Cd Length: 115 Bit Score: 111.90 E-value: 6.50e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 542 LVSGNLTdRGGPLGYQKILWIPAGALRLQIAQLRPSSNYLALRGPGGRSIINGNWAVDP-PGSYRAGGTVFRYNRPPREe 620
Cdd:pfam05986 1 TVSGSFT-EGRAKGYVTFVTIPAGATHIHIVNRKPSFTHLAVKNVQGKYILNGKGSISLnPTYPSLLGTVLEYRRSLPA- 78
|
90 100 110
....*....|....*....|....*....|....*...
gi 767909572 621 gkGESLSAEGPTTQPVDVYMIFQEE---NPGVFYQYVI 655
Cdd:pfam05986 79 --LEELHAPGPTQEDLEIQVLRQYGkgtNPGITYEYFI 114
|
|
| TSP1_ADAMTS |
pfam19030 |
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ... |
783-839 |
7.70e-16 |
|
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.
:
Pssm-ID: 465950 [Multi-domain] Cd Length: 55 Bit Score: 72.49 E-value: 7.70e-16
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 767909572 783 WEAGEWTSCSRSCGPGTQHRQLQCRQEfgGGGSSVPPERCGHLPRPNITQSCQLRLC 839
Cdd:pfam19030 1 WVAGPWGECSVTCGGGVQTRLVQCVQK--GGGSIVPDSECSAQKKPPETQSCNLKPC 55
|
|
| TSP1_ADAMTS |
pfam19030 |
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ... |
970-1026 |
2.64e-13 |
|
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.
:
Pssm-ID: 465950 [Multi-domain] Cd Length: 55 Bit Score: 65.55 E-value: 2.64e-13
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 767909572 970 WYTGPWGECSSECGSGTQRRDIICVSKLGteFNVTSPSNCSHLPRPPALQPCQGQAC 1026
Cdd:pfam19030 1 WVAGPWGECSVTCGGGVQTRLVQCVQKGG--GSIVPDSECSAQKKPPETQSCNLKPC 55
|
|
| TSP1_ADAMTS |
pfam19030 |
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ... |
1030-1081 |
4.77e-11 |
|
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.
:
Pssm-ID: 465950 [Multi-domain] Cd Length: 55 Bit Score: 59.00 E-value: 4.77e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 767909572 1030 WFSTPWSPCSRSCQGGTQTREVQCLSTN---QTLSTRCPPQLRPSRKRPCNSQPC 1081
Cdd:pfam19030 1 WVAGPWGECSVTCGGGVQTRLVQCVQKGggsIVPDSECSAQKKPPETQSCNLKPC 55
|
|
| PLAC |
pfam08686 |
PLAC (protease and lacunin) domain; The PLAC (protease and lacunin) domain is a short ... |
1089-1118 |
8.78e-11 |
|
PLAC (protease and lacunin) domain; The PLAC (protease and lacunin) domain is a short six-cysteine region that is usually found at the C terminal of proteins. It is found in a range of proteins including PACE4 (paired basic amino acid cleaving enzyme 4) and the extracellular matrix protein lacunin.
:
Pssm-ID: 462560 Cd Length: 31 Bit Score: 57.55 E-value: 8.78e-11
10 20 30
....*....|....*....|....*....|
gi 767909572 1089 CKDSSPHCPLVVQARLCVYPYYTATCCRSC 1118
Cdd:pfam08686 1 CKDKFANCSLVVQARLCSHKYYRQFCCRSC 30
|
|
| ADAMTS_CR_3 super family |
cl41950 |
ADAMTS cysteine-rich domain; This cysteine rich domain is found in a variety of ADAMTS and ... |
469-540 |
8.30e-10 |
|
ADAMTS cysteine-rich domain; This cysteine rich domain is found in a variety of ADAMTS and ADAMTS-like endopeptidases widely spread in animals. It is a well-conserved cysteine-rich sequence containing 10 cysteine residues. ADAM-TS (A Disintegrin and Metalloproteinase with Thrombospondin Motifs) is closely related to the ADAM family (A Disintegrin and Metalloproteinase, pfam08516) and consists of at least 20 members sharing a high degree of sequence similarity and conserved domain organization. Members of the ADAMTS family have been implicated in a range of diseases.
The actual alignment was detected with superfamily member pfam19236:
Pssm-ID: 437068 Cd Length: 115 Bit Score: 57.41 E-value: 8.30e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767909572 469 QGSQRCELNCRPRGFRFYVRHTEKVQDGTLCQPGAP------DICVAGRCLSPGCDGILGSGRRPDGCGVCGGDDSTC 540
Cdd:pfam19236 38 QGDALCRHMCRAIGESFIMKRGDSFLDGTRCMPSGPredgtlSLCVLGSCRTFGCDGRMDSQQVWDRCQVCGGDNSTC 115
|
|
| TSP1_ADAMTS super family |
cl40597 |
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ... |
842-897 |
3.50e-09 |
|
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.
The actual alignment was detected with superfamily member pfam19030:
Pssm-ID: 465950 [Multi-domain] Cd Length: 55 Bit Score: 53.61 E-value: 3.50e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 767909572 842 WEVGsPWSQCSVRCGRGQRSRQVRCVG-NNGDEVSEQECaSGPPQPPSREACDMGPC 897
Cdd:pfam19030 1 WVAG-PWGECSVTCGGGVQTRLVQCVQkGGGSIVPDSEC-SAQKKPPETQSCNLKPC 55
|
|
| TSP1_ADAMTS super family |
cl40597 |
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ... |
901-964 |
9.03e-08 |
|
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.
The actual alignment was detected with superfamily member pfam19030:
Pssm-ID: 465950 [Multi-domain] Cd Length: 55 Bit Score: 49.76 E-value: 9.03e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767909572 901 WFHSDWSSkCSAECGTGIQRRSVVCLGSGaalgpGQGEAGagtGQSCPTGSRPPDMRACSLGPC 964
Cdd:pfam19030 1 WVAGPWGE-CSVTCGGGVQTRLVQCVQKG-----GGSIVP---DSECSAQKKPPETQSCNLKPC 55
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
176-425 |
7.25e-06 |
|
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 50.71 E-value: 7.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 176 ARRSRLRDPIKPGMFGYGRVPfalplhrnrRHPRSPPRSELSLISSRGEEAIPSP---TPRAEPFSANGSPQTELPPTEL 252
Cdd:PHA03247 2581 AVTSRARRPDAPPQSARPRAP---------VDDRGDPRGPAPPSPLPPDTHAPDPpppSPSPAANEPDPHPPPTVPPPER 2651
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 253 SVHTPSPQAEPLSPETAQTEVAPRTRPAPLRHHPRA---------QASGTEPPSPTHSLGEGGFFRASPQPRRPSSQGWA 323
Cdd:PHA03247 2652 PRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAarptvgsltSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQA 2731
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 324 SPQV-AGRRPDPFPSVPRGRGqqGQGPWGTGGTPHGPRLEPDPQHPGA----WLPLLSNGPHASSLWSLFAPSSPIPRCS 398
Cdd:PHA03247 2732 SPALpAAPAPPAVPAGPATPG--GPARPARPPTTAGPPAPAPPAAPAAgpprRLTRPAVASLSESRESLPSPWDPADPPA 2809
|
250 260
....*....|....*....|....*....
gi 767909572 399 GESEQLRA--CSQAPCPPEQPDPRALQCA 425
Cdd:PHA03247 2810 AVLAPAAAlpPAASPAGPLPPPTSAQPTA 2838
|
|
| TSP1 |
smart00209 |
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
80-110 |
9.64e-05 |
|
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
:
Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 41.03 E-value: 9.64e-05
10 20 30
....*....|....*....|....*....|.
gi 767909572 80 WGPWVQWASCSQPCGVGVQRRSRTCQLPTVQ 110
Cdd:smart00209 1 WSEWSEWSPCSVTCGGGVQTRTRSCCSPPPQ 31
|
|
| TSP1_ADAMTS super family |
cl40597 |
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ... |
730-779 |
3.49e-03 |
|
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.
The actual alignment was detected with superfamily member pfam19030:
Pssm-ID: 465950 [Multi-domain] Cd Length: 55 Bit Score: 36.66 E-value: 3.49e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 767909572 730 SACSASCGKGVWRPIFLCISRESGEELDERSCAAGARPPASpEPCHGTPC 779
Cdd:pfam19030 7 GECSVTCGGGVQTRLVQCVQKGGGSIVPDSECSAQKKPPET-QSCNLKPC 55
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| ADAMTS_spacer1 |
pfam05986 |
ADAM-TS Spacer 1; This domain represents the Spacer-1 region from the ADAM-TS and ADAM-TS-like ... |
542-655 |
6.50e-29 |
|
ADAM-TS Spacer 1; This domain represents the Spacer-1 region from the ADAM-TS and ADAM-TS-like proteins. ADAM-TS (A Disintegrin and Metalloproteinase with Thrombospondin Motifs) is closely related to the ADAM family (A Disintegrin and Metalloproteinase) and is a subfamily of the metalloprotease family, sharing a high degree of sequence similarity and conserved domain organization among its members. Members of the ADAM-TS family have been implicated in a range of diseases. ADAM-TS-like proteins lack a metalloprotease domain. They resides in the ECM and have regulatory roles. Examples of ADAM-TS-like proteins are papilin and punctin.
Pssm-ID: 461796 Cd Length: 115 Bit Score: 111.90 E-value: 6.50e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 542 LVSGNLTdRGGPLGYQKILWIPAGALRLQIAQLRPSSNYLALRGPGGRSIINGNWAVDP-PGSYRAGGTVFRYNRPPREe 620
Cdd:pfam05986 1 TVSGSFT-EGRAKGYVTFVTIPAGATHIHIVNRKPSFTHLAVKNVQGKYILNGKGSISLnPTYPSLLGTVLEYRRSLPA- 78
|
90 100 110
....*....|....*....|....*....|....*...
gi 767909572 621 gkGESLSAEGPTTQPVDVYMIFQEE---NPGVFYQYVI 655
Cdd:pfam05986 79 --LEELHAPGPTQEDLEIQVLRQYGkgtNPGITYEYFI 114
|
|
| TSP1_ADAMTS |
pfam19030 |
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ... |
783-839 |
7.70e-16 |
|
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.
Pssm-ID: 465950 [Multi-domain] Cd Length: 55 Bit Score: 72.49 E-value: 7.70e-16
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 767909572 783 WEAGEWTSCSRSCGPGTQHRQLQCRQEfgGGGSSVPPERCGHLPRPNITQSCQLRLC 839
Cdd:pfam19030 1 WVAGPWGECSVTCGGGVQTRLVQCVQK--GGGSIVPDSECSAQKKPPETQSCNLKPC 55
|
|
| TSP1_ADAMTS |
pfam19030 |
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ... |
970-1026 |
2.64e-13 |
|
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.
Pssm-ID: 465950 [Multi-domain] Cd Length: 55 Bit Score: 65.55 E-value: 2.64e-13
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 767909572 970 WYTGPWGECSSECGSGTQRRDIICVSKLGteFNVTSPSNCSHLPRPPALQPCQGQAC 1026
Cdd:pfam19030 1 WVAGPWGECSVTCGGGVQTRLVQCVQKGG--GSIVPDSECSAQKKPPETQSCNLKPC 55
|
|
| TSP1_ADAMTS |
pfam19030 |
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ... |
1030-1081 |
4.77e-11 |
|
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.
Pssm-ID: 465950 [Multi-domain] Cd Length: 55 Bit Score: 59.00 E-value: 4.77e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 767909572 1030 WFSTPWSPCSRSCQGGTQTREVQCLSTN---QTLSTRCPPQLRPSRKRPCNSQPC 1081
Cdd:pfam19030 1 WVAGPWGECSVTCGGGVQTRLVQCVQKGggsIVPDSECSAQKKPPETQSCNLKPC 55
|
|
| PLAC |
pfam08686 |
PLAC (protease and lacunin) domain; The PLAC (protease and lacunin) domain is a short ... |
1089-1118 |
8.78e-11 |
|
PLAC (protease and lacunin) domain; The PLAC (protease and lacunin) domain is a short six-cysteine region that is usually found at the C terminal of proteins. It is found in a range of proteins including PACE4 (paired basic amino acid cleaving enzyme 4) and the extracellular matrix protein lacunin.
Pssm-ID: 462560 Cd Length: 31 Bit Score: 57.55 E-value: 8.78e-11
10 20 30
....*....|....*....|....*....|
gi 767909572 1089 CKDSSPHCPLVVQARLCVYPYYTATCCRSC 1118
Cdd:pfam08686 1 CKDKFANCSLVVQARLCSHKYYRQFCCRSC 30
|
|
| ADAMTS_CR_3 |
pfam19236 |
ADAMTS cysteine-rich domain; This cysteine rich domain is found in a variety of ADAMTS and ... |
469-540 |
8.30e-10 |
|
ADAMTS cysteine-rich domain; This cysteine rich domain is found in a variety of ADAMTS and ADAMTS-like endopeptidases widely spread in animals. It is a well-conserved cysteine-rich sequence containing 10 cysteine residues. ADAM-TS (A Disintegrin and Metalloproteinase with Thrombospondin Motifs) is closely related to the ADAM family (A Disintegrin and Metalloproteinase, pfam08516) and consists of at least 20 members sharing a high degree of sequence similarity and conserved domain organization. Members of the ADAMTS family have been implicated in a range of diseases.
Pssm-ID: 437068 Cd Length: 115 Bit Score: 57.41 E-value: 8.30e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767909572 469 QGSQRCELNCRPRGFRFYVRHTEKVQDGTLCQPGAP------DICVAGRCLSPGCDGILGSGRRPDGCGVCGGDDSTC 540
Cdd:pfam19236 38 QGDALCRHMCRAIGESFIMKRGDSFLDGTRCMPSGPredgtlSLCVLGSCRTFGCDGRMDSQQVWDRCQVCGGDNSTC 115
|
|
| TSP1_ADAMTS |
pfam19030 |
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ... |
842-897 |
3.50e-09 |
|
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.
Pssm-ID: 465950 [Multi-domain] Cd Length: 55 Bit Score: 53.61 E-value: 3.50e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 767909572 842 WEVGsPWSQCSVRCGRGQRSRQVRCVG-NNGDEVSEQECaSGPPQPPSREACDMGPC 897
Cdd:pfam19030 1 WVAG-PWGECSVTCGGGVQTRLVQCVQkGGGSIVPDSEC-SAQKKPPETQSCNLKPC 55
|
|
| TSP1_ADAMTS |
pfam19030 |
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ... |
901-964 |
9.03e-08 |
|
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.
Pssm-ID: 465950 [Multi-domain] Cd Length: 55 Bit Score: 49.76 E-value: 9.03e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767909572 901 WFHSDWSSkCSAECGTGIQRRSVVCLGSGaalgpGQGEAGagtGQSCPTGSRPPDMRACSLGPC 964
Cdd:pfam19030 1 WVAGPWGE-CSVTCGGGVQTRLVQCVQKG-----GGSIVP---DSECSAQKKPPETQSCNLKPC 55
|
|
| TSP1 |
smart00209 |
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
1033-1082 |
4.49e-06 |
|
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 44.89 E-value: 4.49e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 767909572 1033 TPWSPCSRSCQGGTQTREVQCLSTNQTLS-TRCPPQLRpsRKRPCNSQPCS 1082
Cdd:smart00209 5 SEWSPCSVTCGGGVQTRTRSCCSPPPQNGgGPCTGEDV--ETRACNEQPCP 53
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
176-425 |
7.25e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 50.71 E-value: 7.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 176 ARRSRLRDPIKPGMFGYGRVPfalplhrnrRHPRSPPRSELSLISSRGEEAIPSP---TPRAEPFSANGSPQTELPPTEL 252
Cdd:PHA03247 2581 AVTSRARRPDAPPQSARPRAP---------VDDRGDPRGPAPPSPLPPDTHAPDPpppSPSPAANEPDPHPPPTVPPPER 2651
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 253 SVHTPSPQAEPLSPETAQTEVAPRTRPAPLRHHPRA---------QASGTEPPSPTHSLGEGGFFRASPQPRRPSSQGWA 323
Cdd:PHA03247 2652 PRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAarptvgsltSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQA 2731
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 324 SPQV-AGRRPDPFPSVPRGRGqqGQGPWGTGGTPHGPRLEPDPQHPGA----WLPLLSNGPHASSLWSLFAPSSPIPRCS 398
Cdd:PHA03247 2732 SPALpAAPAPPAVPAGPATPG--GPARPARPPTTAGPPAPAPPAAPAAgpprRLTRPAVASLSESRESLPSPWDPADPPA 2809
|
250 260
....*....|....*....|....*....
gi 767909572 399 GESEQLRA--CSQAPCPPEQPDPRALQCA 425
Cdd:PHA03247 2810 AVLAPAAAlpPAASPAGPLPPPTSAQPTA 2838
|
|
| TSP1 |
smart00209 |
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
842-897 |
3.40e-05 |
|
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 42.19 E-value: 3.40e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 767909572 842 WEVGSPWSQCSVRCGRGQRSRQVRCVGNNGDeVSEQECasgPPQPPSREACDMGPC 897
Cdd:smart00209 1 WSEWSEWSPCSVTCGGGVQTRTRSCCSPPPQ-NGGGPC---TGEDVETRACNEQPC 52
|
|
| TSP1 |
smart00209 |
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
80-110 |
9.64e-05 |
|
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 41.03 E-value: 9.64e-05
10 20 30
....*....|....*....|....*....|.
gi 767909572 80 WGPWVQWASCSQPCGVGVQRRSRTCQLPTVQ 110
Cdd:smart00209 1 WSEWSEWSPCSVTCGGGVQTRTRSCCSPPPQ 31
|
|
| PAT1 |
pfam09770 |
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ... |
132-349 |
6.14e-04 |
|
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.
Pssm-ID: 401645 [Multi-domain] Cd Length: 846 Bit Score: 43.87 E-value: 6.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 132 GQGPRPQTSPETLPLYRTQSRGRGGPLRGPAShlgreeTQEIRAARRSRLRDPIKPGMFGYGRVPFALPLHRNRRHPRSP 211
Cdd:pfam09770 164 GVAPKKAAAPAPAPQPAAQPASLPAPSRKMMS------LEEVEAAMRAQAKKPAQQPAPAPAQPPAAPPAQQAQQQQQFP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 212 PRSElslissrgeeaiPSPTPRAEPFSANGSPQTELPPTELSvHTPSPQAEPLSPetaqtevAPRTRPAPLRHHPRAQas 291
Cdd:pfam09770 238 PQIQ------------QQQQPQQQPQQPQQHPGQGHPVTILQ-RPQSPQPDPAQP-------SIQPQAQQFHQQPPPV-- 295
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 767909572 292 gtePPSPTHSLgeggffrasPQPRRPSSQGWASPQVAGRRPDPFPSVPRGRGQQGQGP 349
Cdd:pfam09770 296 ---PVQPTQIL---------QNPNRLSAARVGYPQNPQPGVQPAPAHQAHRQQGSFGR 341
|
|
| PTZ00441 |
PTZ00441 |
sporozoite surface protein 2 (SSP2); Provisional |
839-886 |
2.48e-03 |
|
sporozoite surface protein 2 (SSP2); Provisional
Pssm-ID: 240420 [Multi-domain] Cd Length: 576 Bit Score: 41.87 E-value: 2.48e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 767909572 839 CGHWEvgsPWSQCSVRCGRGQRSRQ-----VRCVGNNGDEVSEQECasgPPQP 886
Cdd:PTZ00441 240 CGPWD---EWTPCSVTCGKGTHSRSrpilhEGCTTHMVEECEEEEC---PVEP 286
|
|
| TSP1_ADAMTS |
pfam19030 |
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ... |
730-779 |
3.49e-03 |
|
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.
Pssm-ID: 465950 [Multi-domain] Cd Length: 55 Bit Score: 36.66 E-value: 3.49e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 767909572 730 SACSASCGKGVWRPIFLCISRESGEELDERSCAAGARPPASpEPCHGTPC 779
Cdd:pfam19030 7 GECSVTCGGGVQTRLVQCVQKGGGSIVPDSECSAQKKPPET-QSCNLKPC 55
|
|
| TSP1 |
smart00209 |
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
783-839 |
6.85e-03 |
|
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 36.03 E-value: 6.85e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 767909572 783 WEAGEWTSCSRSCGPGTQHRQLQCRqefgGGGSSVPPERCGHLPRpnITQSCQLRLC 839
Cdd:smart00209 2 SEWSEWSPCSVTCGGGVQTRTRSCC----SPPPQNGGGPCTGEDV--ETRACNEQPC 52
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
229-420 |
8.49e-03 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 40.14 E-value: 8.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 229 SPTPRAEPfsangSPQTELPPTELSVHTPSPQAEPlSPETAQTEVaprtRPAPLRHHPRAQASGTEPPSPTHSLGEGGFF 308
Cdd:NF033839 294 APKPGMQP-----SPQPEKKEVKPEPETPKPEVKP-QLEKPKPEV----KPQPEKPKPEVKPQLETPKPEVKPQPEKPKP 363
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 309 RASPQPRRPSSQGWASPQVAGRRPDPFPSVPRGRGQQgqgpwgtggTPHGPRLEPDPQhPGAWLPLLSNGPHASSLWSLF 388
Cdd:NF033839 364 EVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKP---------QPEKPKPEVKPQ-PEKPKPEVKPQPEKPKPEVKP 433
|
170 180 190
....*....|....*....|....*....|..
gi 767909572 389 APSSPIPRCSGESEQLRacSQAPCPPEQPDPR 420
Cdd:NF033839 434 QPEKPKPEVKPQPEKPK--PEVKPQPETPKPE 463
|
|
| TSP1_spondin |
pfam19028 |
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ... |
81-103 |
9.22e-03 |
|
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.
Pssm-ID: 465948 Cd Length: 52 Bit Score: 35.33 E-value: 9.22e-03
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| ADAMTS_spacer1 |
pfam05986 |
ADAM-TS Spacer 1; This domain represents the Spacer-1 region from the ADAM-TS and ADAM-TS-like ... |
542-655 |
6.50e-29 |
|
ADAM-TS Spacer 1; This domain represents the Spacer-1 region from the ADAM-TS and ADAM-TS-like proteins. ADAM-TS (A Disintegrin and Metalloproteinase with Thrombospondin Motifs) is closely related to the ADAM family (A Disintegrin and Metalloproteinase) and is a subfamily of the metalloprotease family, sharing a high degree of sequence similarity and conserved domain organization among its members. Members of the ADAM-TS family have been implicated in a range of diseases. ADAM-TS-like proteins lack a metalloprotease domain. They resides in the ECM and have regulatory roles. Examples of ADAM-TS-like proteins are papilin and punctin.
Pssm-ID: 461796 Cd Length: 115 Bit Score: 111.90 E-value: 6.50e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 542 LVSGNLTdRGGPLGYQKILWIPAGALRLQIAQLRPSSNYLALRGPGGRSIINGNWAVDP-PGSYRAGGTVFRYNRPPREe 620
Cdd:pfam05986 1 TVSGSFT-EGRAKGYVTFVTIPAGATHIHIVNRKPSFTHLAVKNVQGKYILNGKGSISLnPTYPSLLGTVLEYRRSLPA- 78
|
90 100 110
....*....|....*....|....*....|....*...
gi 767909572 621 gkGESLSAEGPTTQPVDVYMIFQEE---NPGVFYQYVI 655
Cdd:pfam05986 79 --LEELHAPGPTQEDLEIQVLRQYGkgtNPGITYEYFI 114
|
|
| TSP1_ADAMTS |
pfam19030 |
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ... |
783-839 |
7.70e-16 |
|
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.
Pssm-ID: 465950 [Multi-domain] Cd Length: 55 Bit Score: 72.49 E-value: 7.70e-16
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 767909572 783 WEAGEWTSCSRSCGPGTQHRQLQCRQEfgGGGSSVPPERCGHLPRPNITQSCQLRLC 839
Cdd:pfam19030 1 WVAGPWGECSVTCGGGVQTRLVQCVQK--GGGSIVPDSECSAQKKPPETQSCNLKPC 55
|
|
| TSP1_ADAMTS |
pfam19030 |
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ... |
970-1026 |
2.64e-13 |
|
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.
Pssm-ID: 465950 [Multi-domain] Cd Length: 55 Bit Score: 65.55 E-value: 2.64e-13
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 767909572 970 WYTGPWGECSSECGSGTQRRDIICVSKLGteFNVTSPSNCSHLPRPPALQPCQGQAC 1026
Cdd:pfam19030 1 WVAGPWGECSVTCGGGVQTRLVQCVQKGG--GSIVPDSECSAQKKPPETQSCNLKPC 55
|
|
| TSP1_ADAMTS |
pfam19030 |
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ... |
1030-1081 |
4.77e-11 |
|
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.
Pssm-ID: 465950 [Multi-domain] Cd Length: 55 Bit Score: 59.00 E-value: 4.77e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 767909572 1030 WFSTPWSPCSRSCQGGTQTREVQCLSTN---QTLSTRCPPQLRPSRKRPCNSQPC 1081
Cdd:pfam19030 1 WVAGPWGECSVTCGGGVQTRLVQCVQKGggsIVPDSECSAQKKPPETQSCNLKPC 55
|
|
| PLAC |
pfam08686 |
PLAC (protease and lacunin) domain; The PLAC (protease and lacunin) domain is a short ... |
1089-1118 |
8.78e-11 |
|
PLAC (protease and lacunin) domain; The PLAC (protease and lacunin) domain is a short six-cysteine region that is usually found at the C terminal of proteins. It is found in a range of proteins including PACE4 (paired basic amino acid cleaving enzyme 4) and the extracellular matrix protein lacunin.
Pssm-ID: 462560 Cd Length: 31 Bit Score: 57.55 E-value: 8.78e-11
10 20 30
....*....|....*....|....*....|
gi 767909572 1089 CKDSSPHCPLVVQARLCVYPYYTATCCRSC 1118
Cdd:pfam08686 1 CKDKFANCSLVVQARLCSHKYYRQFCCRSC 30
|
|
| ADAMTS_CR_3 |
pfam19236 |
ADAMTS cysteine-rich domain; This cysteine rich domain is found in a variety of ADAMTS and ... |
469-540 |
8.30e-10 |
|
ADAMTS cysteine-rich domain; This cysteine rich domain is found in a variety of ADAMTS and ADAMTS-like endopeptidases widely spread in animals. It is a well-conserved cysteine-rich sequence containing 10 cysteine residues. ADAM-TS (A Disintegrin and Metalloproteinase with Thrombospondin Motifs) is closely related to the ADAM family (A Disintegrin and Metalloproteinase, pfam08516) and consists of at least 20 members sharing a high degree of sequence similarity and conserved domain organization. Members of the ADAMTS family have been implicated in a range of diseases.
Pssm-ID: 437068 Cd Length: 115 Bit Score: 57.41 E-value: 8.30e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767909572 469 QGSQRCELNCRPRGFRFYVRHTEKVQDGTLCQPGAP------DICVAGRCLSPGCDGILGSGRRPDGCGVCGGDDSTC 540
Cdd:pfam19236 38 QGDALCRHMCRAIGESFIMKRGDSFLDGTRCMPSGPredgtlSLCVLGSCRTFGCDGRMDSQQVWDRCQVCGGDNSTC 115
|
|
| TSP1_ADAMTS |
pfam19030 |
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ... |
842-897 |
3.50e-09 |
|
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.
Pssm-ID: 465950 [Multi-domain] Cd Length: 55 Bit Score: 53.61 E-value: 3.50e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 767909572 842 WEVGsPWSQCSVRCGRGQRSRQVRCVG-NNGDEVSEQECaSGPPQPPSREACDMGPC 897
Cdd:pfam19030 1 WVAG-PWGECSVTCGGGVQTRLVQCVQkGGGSIVPDSEC-SAQKKPPETQSCNLKPC 55
|
|
| TSP1_ADAMTS |
pfam19030 |
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ... |
901-964 |
9.03e-08 |
|
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.
Pssm-ID: 465950 [Multi-domain] Cd Length: 55 Bit Score: 49.76 E-value: 9.03e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767909572 901 WFHSDWSSkCSAECGTGIQRRSVVCLGSGaalgpGQGEAGagtGQSCPTGSRPPDMRACSLGPC 964
Cdd:pfam19030 1 WVAGPWGE-CSVTCGGGVQTRLVQCVQKG-----GGSIVP---DSECSAQKKPPETQSCNLKPC 55
|
|
| TSP1 |
smart00209 |
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
1033-1082 |
4.49e-06 |
|
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 44.89 E-value: 4.49e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 767909572 1033 TPWSPCSRSCQGGTQTREVQCLSTNQTLS-TRCPPQLRpsRKRPCNSQPCS 1082
Cdd:smart00209 5 SEWSPCSVTCGGGVQTRTRSCCSPPPQNGgGPCTGEDV--ETRACNEQPCP 53
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
176-425 |
7.25e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 50.71 E-value: 7.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 176 ARRSRLRDPIKPGMFGYGRVPfalplhrnrRHPRSPPRSELSLISSRGEEAIPSP---TPRAEPFSANGSPQTELPPTEL 252
Cdd:PHA03247 2581 AVTSRARRPDAPPQSARPRAP---------VDDRGDPRGPAPPSPLPPDTHAPDPpppSPSPAANEPDPHPPPTVPPPER 2651
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 253 SVHTPSPQAEPLSPETAQTEVAPRTRPAPLRHHPRA---------QASGTEPPSPTHSLGEGGFFRASPQPRRPSSQGWA 323
Cdd:PHA03247 2652 PRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAarptvgsltSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQA 2731
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 324 SPQV-AGRRPDPFPSVPRGRGqqGQGPWGTGGTPHGPRLEPDPQHPGA----WLPLLSNGPHASSLWSLFAPSSPIPRCS 398
Cdd:PHA03247 2732 SPALpAAPAPPAVPAGPATPG--GPARPARPPTTAGPPAPAPPAAPAAgpprRLTRPAVASLSESRESLPSPWDPADPPA 2809
|
250 260
....*....|....*....|....*....
gi 767909572 399 GESEQLRA--CSQAPCPPEQPDPRALQCA 425
Cdd:PHA03247 2810 AVLAPAAAlpPAASPAGPLPPPTSAQPTA 2838
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
127-449 |
3.27e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.40 E-value: 3.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 127 ALLPRGQGPRPqtsPETLPLYRTQSRGRGGPLRGPASHLGREETQEIRAARRSRLRDPIKPgmfgygrVPFALPLHRNRR 206
Cdd:PHA03247 2616 PLPPDTHAPDP---PPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRA-------AQASSPPQRPRR 2685
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 207 HPRSPPRSELSLISSRgeeaiPSPTPRAEPFSANGSPQTELPPTELSVHTPSPQ-----AEPLSPETAQTEVAPRTRPAP 281
Cdd:PHA03247 2686 RAARPTVGSLTSLADP-----PPPPPTPEPAPHALVSATPLPPGPAAARQASPAlpaapAPPAVPAGPATPGGPARPARP 2760
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 282 LRHH-------PRAQASGTEPPSPTHSLGEGGFFRAS-PQPRRPSSQGWASPQVAGRRPD-------------PFPSVPR 340
Cdd:PHA03247 2761 PTTAgppapapPAAPAAGPPRRLTRPAVASLSESRESlPSPWDPADPPAAVLAPAAALPPaaspagplppptsAQPTAPP 2840
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 341 GRGQQGQGPWGTGGT--PHGPRLEPDPQHPGAWLPLLSNGPHASSLWSLFAPSSPIPRCSGESEQLRACSQAPCPPEQPD 418
Cdd:PHA03247 2841 PPPGPPPPSLPLGGSvaPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQ 2920
|
330 340 350
....*....|....*....|....*....|.
gi 767909572 419 PRALQCAAFNSQEfmgqlyQWEPFTEAPLLP 449
Cdd:PHA03247 2921 PQPPPPPQPQPPP------PPPPRPQPPLAP 2945
|
|
| TSP1 |
smart00209 |
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
842-897 |
3.40e-05 |
|
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 42.19 E-value: 3.40e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 767909572 842 WEVGSPWSQCSVRCGRGQRSRQVRCVGNNGDeVSEQECasgPPQPPSREACDMGPC 897
Cdd:smart00209 1 WSEWSEWSPCSVTCGGGVQTRTRSCCSPPPQ-NGGGPC---TGEDVETRACNEQPC 52
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
208-370 |
8.51e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 46.90 E-value: 8.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 208 PRSPPRSELSLISSRGEEAIPSPTPRAEPFSANGSPQTELPPTELSVHTPSPQAEPLSPETAQTEVAPRTRPAPLRHHPR 287
Cdd:PRK07764 597 GEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGA 676
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 288 AQASGTEPPSPTHSLGEGGFFRASPQPRRPssQGWASPQVAGRRPDPfPSVPRGRGQQGQGPWGTGGTPHGPRLEPDPQH 367
Cdd:PRK07764 677 APAAPPPAPAPAAPAAPAGAAPAQPAPAPA--ATPPAGQADDPAAQP-PQAAQGASAPSPAADDPVPLPPEPDDPPDPAG 753
|
...
gi 767909572 368 PGA 370
Cdd:PRK07764 754 APA 756
|
|
| TSP1 |
smart00209 |
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
80-110 |
9.64e-05 |
|
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 41.03 E-value: 9.64e-05
10 20 30
....*....|....*....|....*....|.
gi 767909572 80 WGPWVQWASCSQPCGVGVQRRSRTCQLPTVQ 110
Cdd:smart00209 1 WSEWSEWSPCSVTCGGGVQTRTRSCCSPPPQ 31
|
|
| TSP1_spondin |
pfam19028 |
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ... |
1033-1081 |
1.03e-04 |
|
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.
Pssm-ID: 465948 Cd Length: 52 Bit Score: 41.11 E-value: 1.03e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 767909572 1033 TPWSPCSRSCQGGTQTREVQCLSTNQTLSTRCPPQLrpsRKRPCNSQPC 1081
Cdd:pfam19028 7 SEWSECSVTCGGGVQTRTRTVIVEPQNGGRPCPELL---ERRPCNLPPC 52
|
|
| PAT1 |
pfam09770 |
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ... |
132-349 |
6.14e-04 |
|
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.
Pssm-ID: 401645 [Multi-domain] Cd Length: 846 Bit Score: 43.87 E-value: 6.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 132 GQGPRPQTSPETLPLYRTQSRGRGGPLRGPAShlgreeTQEIRAARRSRLRDPIKPGMFGYGRVPFALPLHRNRRHPRSP 211
Cdd:pfam09770 164 GVAPKKAAAPAPAPQPAAQPASLPAPSRKMMS------LEEVEAAMRAQAKKPAQQPAPAPAQPPAAPPAQQAQQQQQFP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 212 PRSElslissrgeeaiPSPTPRAEPFSANGSPQTELPPTELSvHTPSPQAEPLSPetaqtevAPRTRPAPLRHHPRAQas 291
Cdd:pfam09770 238 PQIQ------------QQQQPQQQPQQPQQHPGQGHPVTILQ-RPQSPQPDPAQP-------SIQPQAQQFHQQPPPV-- 295
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 767909572 292 gtePPSPTHSLgeggffrasPQPRRPSSQGWASPQVAGRRPDPFPSVPRGRGQQGQGP 349
Cdd:pfam09770 296 ---PVQPTQIL---------QNPNRLSAARVGYPQNPQPGVQPAPAHQAHRQQGSFGR 341
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
133-425 |
6.41e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.16 E-value: 6.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 133 QGPRPQTSPETL-PLYRTQSRGRGGPLRGPASHLGREETQEIRAARRSRLRDPIKPGMFGYGRVPFALPLHRNRRHPRSP 211
Cdd:PHA03247 2681 QRPRRRAARPTVgSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARP 2760
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 212 PRSElSLISSRGEEAIPSPTPRAEPFSAnGSPQTELPPTELSVHTPSPQAEPLSPETAQTEVAPR---TRPAPLRHHPRA 288
Cdd:PHA03247 2761 PTTA-GPPAPAPPAAPAAGPPRRLTRPA-VASLSESRESLPSPWDPADPPAAVLAPAAALPPAASpagPLPPPTSAQPTA 2838
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 289 QASGTEPPSPTHSLG----EGGFFRASPQPRRPSSQGWASPQVAGRRPdPFPSVPRGRGQQGQGPWG-----TGGTPHGP 359
Cdd:PHA03247 2839 PPPPPGPPPPSLPLGgsvaPGGDVRRRPPSRSPAAKPAAPARPPVRRL-ARPAVSRSTESFALPPDQperppQPQAPPPP 2917
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 767909572 360 RLEPDPQHPGAWLPLLSNGPHASSLWSLFAPSSPIPRCSGESEQLRACSQAPCPPEQPDPRALQCA 425
Cdd:PHA03247 2918 QPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPA 2983
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
206-420 |
6.95e-04 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 43.66 E-value: 6.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 206 RHPRSPPRSELSLISSRGEEAIPSPTPRAEPfsangSPQTELPPTELSVHTPSPQAEPLSPETAQTEVAPRTRPAPLRHH 285
Cdd:PRK14086 76 RELGRPIRIAITVDPSAGEPAPPPPHARRTS-----EPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTARPAYPAYQ 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 286 PRAQaSGTEPPSPthslgeggfFRASPQPRR---PSSQGWASPQVAGRRPDPF-PSVPRGRGQQGQgPWGTGGTPhgprl 361
Cdd:PRK14086 151 QRPE-PGAWPRAA---------DDYGWQQQRlgfPPRAPYASPASYAPEQERDrEPYDAGRPEYDQ-RRRDYDHP----- 214
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 767909572 362 EPDPQHPGAW---LPLLSNG---PHASSLWSLFAPSSPIPRCSGESEQLRACSQAPCP-PEQPDPR 420
Cdd:PRK14086 215 RPDWDRPRRDrtdRPEPPPGaghVHRGGPGPPERDDAPVVPIRPSAPGPLAAQPAPAPgPGEPTAR 280
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
222-336 |
1.76e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 42.39 E-value: 1.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 222 RGEEAIPSPTPRAEPFSANGSpqTELPPTElsvhTPSPQAEPLSPETAQTEVAPRTRPAPLRHH-PRAQASGTEPPSPTH 300
Cdd:PRK14951 383 RPEAAAPAAAPVAQAAAAPAP--AAAPAAA----ASAPAAPPAAAPPAPVAAPAAAAPAAAPAAaPAAVALAPAPPAQAA 456
|
90 100 110
....*....|....*....|....*....|....*.
gi 767909572 301 SLGEGGFFRASPQPRRPSSQGWASPQVAGRRPDPFP 336
Cdd:PRK14951 457 PETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
210-420 |
1.83e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.47 E-value: 1.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 210 SPPRSELSLISSRGEEAIPSPTPRAEPFSANGSPQTE---LPPTELSVHTPSPQAEPLSPETAQtevAPRTRPAPLRHHP 286
Cdd:PHA03307 136 EMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAalpLSSPEETARAPSSPPAEPPPSTPP---AAASPRPPRRSSP 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 287 RAQASGTEPPSPTHSLGEGGFFRASPQPRRPSSQGWASPQVAGRRPDPFPSVPRGRGQQGQGPWGTG---------GTPH 357
Cdd:PHA03307 213 ISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSsrpgpasssSSPR 292
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767909572 358 GPRLEPDPQHPGAwlPLLSNGPHASSLWSLFAPSS-PIPRCSGESEqlRACSQAPCPPEQPDPR 420
Cdd:PHA03307 293 ERSPSPSPSSPGS--GPAPSSPRASSSSSSSRESSsSSTSSSSESS--RGAAVSPGPSPSRSPS 352
|
|
| PTZ00441 |
PTZ00441 |
sporozoite surface protein 2 (SSP2); Provisional |
839-886 |
2.48e-03 |
|
sporozoite surface protein 2 (SSP2); Provisional
Pssm-ID: 240420 [Multi-domain] Cd Length: 576 Bit Score: 41.87 E-value: 2.48e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 767909572 839 CGHWEvgsPWSQCSVRCGRGQRSRQ-----VRCVGNNGDEVSEQECasgPPQP 886
Cdd:PTZ00441 240 CGPWD---EWTPCSVTCGKGTHSRSrpilhEGCTTHMVEECEEEEC---PVEP 286
|
|
| TSP1_ADAMTS |
pfam19030 |
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ... |
730-779 |
3.49e-03 |
|
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.
Pssm-ID: 465950 [Multi-domain] Cd Length: 55 Bit Score: 36.66 E-value: 3.49e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 767909572 730 SACSASCGKGVWRPIFLCISRESGEELDERSCAAGARPPASpEPCHGTPC 779
Cdd:pfam19030 7 GECSVTCGGGVQTRLVQCVQKGGGSIVPDSECSAQKKPPET-QSCNLKPC 55
|
|
| TSP_1 |
pfam00090 |
Thrombospondin type 1 domain; |
1033-1081 |
4.52e-03 |
|
Thrombospondin type 1 domain;
Pssm-ID: 459668 [Multi-domain] Cd Length: 49 Bit Score: 36.24 E-value: 4.52e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 767909572 1033 TPWSPCSRSCQGGTQTREVQCLStNQTLSTRCPPQLRpsRKRPCNSQPC 1081
Cdd:pfam00090 4 SPWSPCSVTCGKGIQVRQRTCKS-PFPGGEPCTGDDI--ETQACKMDKC 49
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
136-373 |
4.78e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 41.21 E-value: 4.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 136 RPQTSPETLPLYRT--QSRGRGGPLRGPASHLGREETQ----EIRAARRSRLrdPIKPGMFGYGRVPFALPLHRNRRHPR 209
Cdd:PHA03378 575 QPLTSPTTSQLASSapSYAQTPWPVPHPSQTPEPPTTQshipETSAPRQWPM--PLRPIPMRPLRMQPITFNVLVFPTPH 652
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 210 SPPRSELSLISSRGEE-----AIPSPTPRAEPFSANGSPQTELPPTELSVHTPSPQAEP--LSPETAQTEVAPRTRPAPL 282
Cdd:PHA03378 653 QPPQVEITPYKPTWTQighipYQPSPTGANTMLPIQWAPGTMQPPPRAPTPMRPPAAPPgrAQRPAAATGRARPPAAAPG 732
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 283 RHHPRAQASGTEPPsPTHSLGEGGFFRASPQPRRPSSQGWASPQvagrrPDPFPSVPRGRGQQgqgpwgtggtphgPRLE 362
Cdd:PHA03378 733 RARPPAAAPGRARP-PAAAPGRARPPAAAPGRARPPAAAPGAPT-----PQPPPQAPPAPQQR-------------PRGA 793
|
250
....*....|.
gi 767909572 363 PDPQHPGAWLP 373
Cdd:PHA03378 794 PTPQPPPQAGP 804
|
|
| TSP1 |
smart00209 |
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
783-839 |
6.85e-03 |
|
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 36.03 E-value: 6.85e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 767909572 783 WEAGEWTSCSRSCGPGTQHRQLQCRqefgGGGSSVPPERCGHLPRpnITQSCQLRLC 839
Cdd:smart00209 2 SEWSEWSPCSVTCGGGVQTRTRSCC----SPPPQNGGGPCTGEDV--ETRACNEQPC 52
|
|
| TSP_1 |
pfam00090 |
Thrombospondin type 1 domain; |
846-869 |
7.54e-03 |
|
Thrombospondin type 1 domain;
Pssm-ID: 459668 [Multi-domain] Cd Length: 49 Bit Score: 35.47 E-value: 7.54e-03
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
229-420 |
8.49e-03 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 40.14 E-value: 8.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 229 SPTPRAEPfsangSPQTELPPTELSVHTPSPQAEPlSPETAQTEVaprtRPAPLRHHPRAQASGTEPPSPTHSLGEGGFF 308
Cdd:NF033839 294 APKPGMQP-----SPQPEKKEVKPEPETPKPEVKP-QLEKPKPEV----KPQPEKPKPEVKPQLETPKPEVKPQPEKPKP 363
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 309 RASPQPRRPSSQGWASPQVAGRRPDPFPSVPRGRGQQgqgpwgtggTPHGPRLEPDPQhPGAWLPLLSNGPHASSLWSLF 388
Cdd:NF033839 364 EVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKP---------QPEKPKPEVKPQ-PEKPKPEVKPQPEKPKPEVKP 433
|
170 180 190
....*....|....*....|....*....|..
gi 767909572 389 APSSPIPRCSGESEQLRacSQAPCPPEQPDPR 420
Cdd:NF033839 434 QPEKPKPEVKPQPEKPK--PEVKPQPETPKPE 463
|
|
| TSP1_spondin |
pfam19028 |
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ... |
81-103 |
9.22e-03 |
|
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.
Pssm-ID: 465948 Cd Length: 52 Bit Score: 35.33 E-value: 9.22e-03
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
221-421 |
9.55e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 40.24 E-value: 9.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 221 SRGEEAIPSPT--PRAEPFSANGSPQTELPPTELSVHTPSPQAEPLSPETAQTEVAPRTRPAPLRHHPRAQASGTEPPSp 298
Cdd:PRK12323 368 SGGGAGPATAAaaPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGG- 446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 299 thslgeggffRASPQPRRPSS-QGWASPQVAGRRPDPFPSVPRGRGQQGQGPwgtggtphgPRLEPDPQHPGAWLP--LL 375
Cdd:PRK12323 447 ----------APAPAPAPAAApAAAARPAAAGPRPVAAAAAAAPARAAPAAA---------PAPADDDPPPWEELPpeFA 507
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 767909572 376 SNGPHASSLWSLFAPSSPIPRCSGESEQLRACSQAPCPPEQPDPRA 421
Cdd:PRK12323 508 SPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRA 553
|
|
| TSP_1 |
pfam00090 |
Thrombospondin type 1 domain; |
81-107 |
9.56e-03 |
|
Thrombospondin type 1 domain;
Pssm-ID: 459668 [Multi-domain] Cd Length: 49 Bit Score: 35.47 E-value: 9.56e-03
10 20
....*....|....*....|....*..
gi 767909572 81 GPWVQWASCSQPCGVGVQRRSRTCQLP 107
Cdd:pfam00090 1 SPWSPWSPCSVTCGKGIQVRQRTCKSP 27
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
225-420 |
9.56e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 39.97 E-value: 9.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 225 EAIPSPTPRAEPFSANGSPQTELPPTELSVHTPSPQAE--------PLSPETAQTEVAPRTRPAPLRHHPRAQASGTEPP 296
Cdd:PRK07764 585 EAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAapaapapaGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASD 664
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767909572 297 SPTHSLGEGGffRASPQPRRPSSQGWASPQ---VAGRRPDPFPSvPRGRGQQGQGPWGTGGTPHGPRLEPDPQHPGAwLP 373
Cdd:PRK07764 665 GGDGWPAKAG--GAAPAAPPPAPAPAAPAApagAAPAQPAPAPA-ATPPAGQADDPAAQPPQAAQGASAPSPAADDP-VP 740
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 767909572 374 LLSNGPHASSLWSLFAPSSPIPRCSGESEQLRACSQAPCPPEQPDPR 420
Cdd:PRK07764 741 LPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAE 787
|
|
| |
