solute carrier family 13 member 1 isoform X7 [Homo sapiens]
transporter permease( domain architecture ID 229430)
transporter permease similar to ArsB/NhaD family permeases, which typically contain 8-13 transmembrane helices and can function either independently as a chemiosmotic transporter or as a channel-forming subunit of an ATP-driven anion pump
List of domain hits
Name | Accession | Description | Interval | E-value | |||
ArsB_NhaD_permease super family | cl21473 | Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, ... |
41-154 | 1.73e-27 | |||
Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices and can function either independently as a chemiosmotic transporter or as a channel-forming subunit of an ATP-driven anion pump. The actual alignment was detected with superfamily member cd01115: Pssm-ID: 473875 [Multi-domain] Cd Length: 382 Bit Score: 110.75 E-value: 1.73e-27
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Name | Accession | Description | Interval | E-value | |||
SLC13_permease | cd01115 | Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been ... |
41-154 | 1.73e-27 | |||
Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is related to renal and intestinal Na+/sulfate cotransporters and a few putative bacterial permeases. The SLC13-type proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium and various anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease is composed of 8-13 transmembrane helices. Pssm-ID: 238535 [Multi-domain] Cd Length: 382 Bit Score: 110.75 E-value: 1.73e-27
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Na_sulph_symp | pfam00939 | Sodium:sulfate symporter transmembrane region; There are also some members in this family that ... |
33-161 | 3.65e-17 | |||
Sodium:sulfate symporter transmembrane region; There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1. Pssm-ID: 279307 [Multi-domain] Cd Length: 472 Bit Score: 82.03 E-value: 3.65e-17
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CitT | COG0471 | Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism]; |
90-158 | 1.65e-16 | |||
Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism]; Pssm-ID: 440239 [Multi-domain] Cd Length: 369 Bit Score: 79.43 E-value: 1.65e-16
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dass | TIGR00785 | anion transporter; The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally ... |
41-155 | 9.23e-14 | |||
anion transporter; The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally characterized proteins of the DASS family transport (1) organic di- and tricarboxylates of the Krebs Cycle as well as dicarboxylate amino acid, (2) inorganic sulfate and (3) phosphate. The animal NaDC-1 cotransport 3 Na+ with each dicarboxylate. Protonated tricarboxylates are also cotransported with 3Na+. [Transport and binding proteins, Anions, Transport and binding proteins, Cations and iron carrying compounds] Pssm-ID: 273267 [Multi-domain] Cd Length: 444 Bit Score: 71.61 E-value: 9.23e-14
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Name | Accession | Description | Interval | E-value | ||||
SLC13_permease | cd01115 | Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been ... |
41-154 | 1.73e-27 | ||||
Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is related to renal and intestinal Na+/sulfate cotransporters and a few putative bacterial permeases. The SLC13-type proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium and various anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease is composed of 8-13 transmembrane helices. Pssm-ID: 238535 [Multi-domain] Cd Length: 382 Bit Score: 110.75 E-value: 1.73e-27
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Na_sulph_symp | pfam00939 | Sodium:sulfate symporter transmembrane region; There are also some members in this family that ... |
33-161 | 3.65e-17 | ||||
Sodium:sulfate symporter transmembrane region; There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1. Pssm-ID: 279307 [Multi-domain] Cd Length: 472 Bit Score: 82.03 E-value: 3.65e-17
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CitT | COG0471 | Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism]; |
90-158 | 1.65e-16 | ||||
Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism]; Pssm-ID: 440239 [Multi-domain] Cd Length: 369 Bit Score: 79.43 E-value: 1.65e-16
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ArsB_NhaD_permease | cd00625 | Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, ... |
47-157 | 3.67e-16 | ||||
Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices and can function either independently as a chemiosmotic transporter or as a channel-forming subunit of an ATP-driven anion pump. Pssm-ID: 238344 [Multi-domain] Cd Length: 396 Bit Score: 78.83 E-value: 3.67e-16
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CitMHS | pfam03600 | Citrate transporter; |
47-157 | 1.21e-14 | ||||
Citrate transporter; Pssm-ID: 460985 [Multi-domain] Cd Length: 342 Bit Score: 73.89 E-value: 1.21e-14
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dass | TIGR00785 | anion transporter; The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally ... |
41-155 | 9.23e-14 | ||||
anion transporter; The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally characterized proteins of the DASS family transport (1) organic di- and tricarboxylates of the Krebs Cycle as well as dicarboxylate amino acid, (2) inorganic sulfate and (3) phosphate. The animal NaDC-1 cotransport 3 Na+ with each dicarboxylate. Protonated tricarboxylates are also cotransported with 3Na+. [Transport and binding proteins, Anions, Transport and binding proteins, Cations and iron carrying compounds] Pssm-ID: 273267 [Multi-domain] Cd Length: 444 Bit Score: 71.61 E-value: 9.23e-14
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CitT | COG0471 | Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism]; |
40-158 | 6.09e-08 | ||||
Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism]; Pssm-ID: 440239 [Multi-domain] Cd Length: 369 Bit Score: 53.62 E-value: 6.09e-08
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CitMHS | pfam03600 | Citrate transporter; |
7-171 | 7.77e-08 | ||||
Citrate transporter; Pssm-ID: 460985 [Multi-domain] Cd Length: 342 Bit Score: 53.08 E-value: 7.77e-08
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SLC13_permease | cd01115 | Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been ... |
44-158 | 1.70e-06 | ||||
Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is related to renal and intestinal Na+/sulfate cotransporters and a few putative bacterial permeases. The SLC13-type proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium and various anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease is composed of 8-13 transmembrane helices. Pssm-ID: 238535 [Multi-domain] Cd Length: 382 Bit Score: 49.12 E-value: 1.70e-06
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ArsB | COG1055 | Na+/H+ antiporter NhaD or related arsenite permease [Inorganic ion transport and metabolism]; |
40-157 | 5.46e-04 | ||||
Na+/H+ antiporter NhaD or related arsenite permease [Inorganic ion transport and metabolism]; Pssm-ID: 440675 [Multi-domain] Cd Length: 415 Bit Score: 41.65 E-value: 5.46e-04
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dass | TIGR00785 | anion transporter; The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally ... |
47-156 | 2.39e-03 | ||||
anion transporter; The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally characterized proteins of the DASS family transport (1) organic di- and tricarboxylates of the Krebs Cycle as well as dicarboxylate amino acid, (2) inorganic sulfate and (3) phosphate. The animal NaDC-1 cotransport 3 Na+ with each dicarboxylate. Protonated tricarboxylates are also cotransported with 3Na+. [Transport and binding proteins, Anions, Transport and binding proteins, Cations and iron carrying compounds] Pssm-ID: 273267 [Multi-domain] Cd Length: 444 Bit Score: 39.63 E-value: 2.39e-03
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Blast search parameters | ||||
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