|
Name |
Accession |
Description |
Interval |
E-value |
| Bromodomain |
cd04369 |
Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear ... |
137-193 |
2.18e-11 |
|
Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
Pssm-ID: 99922 [Multi-domain] Cd Length: 99 Bit Score: 62.00 E-value: 2.18e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 767954585 137 MCLLQMEEKFASGQYGGITEFVADFRLMLETCYRLHGVDHWISKQGQKLEMMLEQKL 193
Cdd:cd04369 43 MDLSTIKKKLKNGEYKSLEEFEADVRLIFSNAKTYNGPGSPIYKDAKKLEKLFEKLL 99
|
|
| BROMO |
smart00297 |
bromo domain; |
137-196 |
3.48e-07 |
|
bromo domain;
Pssm-ID: 197636 [Multi-domain] Cd Length: 107 Bit Score: 50.35 E-value: 3.48e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 137 MCLLQMEEKFASGQYGGITEFVADFRLMLETCYRLHGVDHWISKQGQKLEMMLEQKLALL 196
Cdd:smart00297 48 MDLKTIKKKLENGKYSSVEEFVADFNLMFSNARTYNGPDSEVYKDAKKLEKFFEKKLREL 107
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
1191-1557 |
1.90e-06 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 52.65 E-value: 1.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1191 TSVSNLLTPSvKTSQSEAGKAKNAVSAATFSLPSASPtiSSTGQPLSSTTTLNGSTNPGSSFncfaqqTADSSEAKQELK 1270
Cdd:pfam17823 84 TEVTAEHTPH-GTDLSEPATREGAADGAASRALAAAA--SSSPSSAAQSLPAAIAALPSEAF------SAPRAAACRANA 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1271 TVCIRDSQSILVRTRGGNTGVVKVQTNPDQNSPNTVSSSSVFTFAPQLQAFLVPKSTTSSSAfspvAGTTTTSSLSPFSQ 1350
Cdd:pfam17823 155 SAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAA----TATGHPAAGTALAA 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1351 TPTSVSIPASFAPSMGKNLKLTLGHTTGSGDLGHVIDKTSHMpSSPLkssicSSTLLPSTTSSSVSVISISAANFG-QNN 1429
Cdd:pfam17823 231 VGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINM-GDPH-----ARRLSPAKHMPSDTMARNPAAPMGaQAQ 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1430 ANIIHTPTKQQQVDYITKSYPvtrseataatngdvisgTPVQKLMLVSAPSILSSGNGTAInmtpalTSTGVSAQKLVFI 1509
Cdd:pfam17823 305 GPIIQVSTDQPVHNTAGEPTP-----------------SPSNTTLEPNTPKSVASTNLAVV------TTTKAQAKEPSAS 361
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 767954585 1510 NAPVPSGTSTPTLVAESlKQTLPPPLhkAYVKTPEQPQIVLIPSTVGT 1557
Cdd:pfam17823 362 PVPVLHTSMIPEVEATS-PTTQPSPL--LPTQGAAGPGILLAPEQVAT 406
|
|
| Hia |
COG5295 |
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, ... |
1137-1719 |
2.08e-06 |
|
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444098 [Multi-domain] Cd Length: 785 Bit Score: 52.85 E-value: 2.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1137 SSFPQTTNINSSLASVFVNSPGTVSTQLPNTAFNKTITplSNISSARPQPLSPVTSVSNLLTPSVKTSQSEAGKAKNAVS 1216
Cdd:COG5295 29 SATVTSAAQSTGSAATSSGSSSAAGGSGSTSSLTAAAA--TAGAGSGGTSATAASSVASGGASAATAASTGTGNTAGTAA 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1217 AATFSLPSASPTISSTGQPLSSTTTLNGSTNPGSSFncfAQQTADSSEAKQELKTVcIRDSQSILVRTRGGNTGVVKVQT 1296
Cdd:COG5295 107 TVAGAASSGSATNAGASAGASAAAAAGSTAAAGGAA---ASTGGSSAAGGSNTATA-TGSSTANAATAAAGATSTSASGS 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1297 NPdqNSPNTVSSSSVFTFAPQLQAFLVPKSTTSSSAFSPVAGTTTTSSLSPFSQTPTSVSIPASFAPSMGK-NLKLTLGH 1375
Cdd:COG5295 183 SS--GASGAAAASAATGASAGGTASAAASASSSATGTSASVGVNAGAATGSAASAGGSASAGAASGNATTAsASSVSGSA 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1376 TTGSGDLGHVIDKTSHMPSSPLKSSICSSTLLPSTTSSSVSVISISAANFGQNNANIIHTPTKQQQvdyITKSYPVTRSE 1455
Cdd:COG5295 261 VAAGTASTATTASTTAASGAAGTATAAAGGDAAAAGSASSTGAANATAGGGNAGSGGGGAAALGSA---GGSSGVGTASG 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1456 ATAATNGDVISGTPVQ---KLMLVSAPSILSSGNGTAINMTPALTSTGVSAQKLVFINAPVPSGTSTPTLVAESlkqtlp 1532
Cdd:COG5295 338 ASAAAATNDGTANGAGtsaAADATSGGGAGGGGAAATSSSGGSATAAGNAAGAAGAGSAGSGGSSTGASAGGGA------ 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1533 pplhKAYVKTPEQPQIVLIPSTVGTPIKINSSPAVSQIKDVKIGLNIGQAIVNTSGTVPAIPSINILQNVTPKGEDKSSK 1612
Cdd:COG5295 412 ----SAAGGAAAGSAAAGTSSNTSAVGASNGASGTSSSASSAGAAGGGTAGAGGAANVGAATTAASAAATAAAATSSAAI 487
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1613 GYILPLSTSGNSVPVSSNFVSQNITPVNESVVSSARAVNVLSVTGANLSLGSFPVTSASASAGAQPPVLVSGNDTSSRIM 1692
Cdd:COG5295 488 AGATATGAGAAAGGAGAGAAGGAGSAAAGGAANAAAASGATATAGSAGGGAAAAAGGGSTTAATGTNSVAVGNNTATGAN 567
|
570 580
....*....|....*....|....*..
gi 767954585 1693 PILSNRLCSSSLGNTVAISTVKTGHLA 1719
Cdd:COG5295 568 SVALGAGSVASGANSVSVGAAGAENVA 594
|
|
| Bromodomain |
pfam00439 |
Bromodomain; Bromodomains are 110 amino acid long domains, that are found in many chromatin ... |
137-184 |
3.54e-05 |
|
Bromodomain; Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Pssm-ID: 425683 [Multi-domain] Cd Length: 84 Bit Score: 43.84 E-value: 3.54e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 767954585 137 MCLLQMEEKFASGQYGGITEFVADFRLMLETCYRLHGVDHWISKQGQK 184
Cdd:pfam00439 37 MDLSTIKKKLENGEYKSLAEFLADVKLIFSNARTYNGPGSVIYKAAEK 84
|
|
| COG5076 |
COG5076 |
Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin ... |
137-186 |
3.78e-05 |
|
Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription];
Pssm-ID: 227408 [Multi-domain] Cd Length: 371 Bit Score: 48.26 E-value: 3.78e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 767954585 137 MCLLQMEEKFASGQYGGITEFVADFRLMLETCYRLHGVDHWISKQGQKLE 186
Cdd:COG5076 189 MDLLTIQKKLKNGRYKSFEEFVSDLNLMFDNCKLYNGPDSSVYVDAKELE 238
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
1668-1825 |
3.95e-05 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 47.21 E-value: 3.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1668 TSASASAGAQPPVLVSGNDTSSRIMPILSNrlcSSSLGNTVAISTVKTGHLASSVLISTTQPVVSPKCLTSALQIPVTva 1747
Cdd:PHA03255 28 GSSTASAGNVTGTTAVTTPSPSASGPSTNQ---STTLTTTSAPITTTAILSTNTTTVTSTGTTVTPVPTTSNASTINV-- 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1748 lpTPATTSPKIINTVPHSAAVPGATRSVSiSKRQSRTSLQFHSPGISTTVPT--NVNTNKPQTELSSLSTSPDSAQVSMS 1825
Cdd:PHA03255 103 --TTKVTAQNITATEAGTGTSTGVTSNVT-TRSSSTTSATTRITNATTLAPTlsSKGTSNATKTTAELPTVPDERQPSLS 179
|
|
| CCDC34 |
pfam13904 |
Coiled-coil domain-containing protein 3; This family is found in eukaryotes; it has several ... |
250-288 |
2.10e-04 |
|
Coiled-coil domain-containing protein 3; This family is found in eukaryotes; it has several conserved tryptophan residues. The function is not known.
Pssm-ID: 464032 [Multi-domain] Cd Length: 221 Bit Score: 44.70 E-value: 2.10e-04
10 20 30 40
....*....|....*....|....*....|....*....|
gi 767954585 250 QVLRQEEQLRAKEEKRLREQERKEAEEASQKEIEEW-ERK 288
Cdd:pfam13904 65 QRQRQKELQAQKEEREKEEQEAELRKRLAKEKYQEWlQRK 104
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
1126-1248 |
3.98e-04 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 44.12 E-value: 3.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1126 PLQQKGTEQHCSSFPQTTNINSSLASVFVNSPGTVSTQLPNTAFNKTITPLSNISSARPQPLSPVTSVSNLLTPSVKTSQ 1205
Cdd:PHA03255 53 PSTNQSTTLTTTSAPITTTAILSTNTTTVTSTGTTVTPVPTTSNASTINVTTKVTAQNITATEAGTGTSTGVTSNVTTRS 132
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 767954585 1206 SEAGKAKNAVSAATfslpSASPTISSTGQPLSSTTTLNGSTNP 1248
Cdd:PHA03255 133 SSTTSATTRITNAT----TLAPTLSSKGTSNATKTTAELPTVP 171
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
1587-1831 |
1.39e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 43.41 E-value: 1.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1587 SGTVPAIPSINILQNVTPKGEDKSSKGYILPLSTSGNSVPVSSNFVSQNITPVNESVVSSARAVNVLSVTGANLSLG--- 1663
Cdd:pfam17823 18 SHAAPADPRHFVLNKMWNGAGKQNASGDAVPRADNKSSEQ*NFCAATAAPAPVTLTKGTSAAHLNSTEVTAEHTPHGtdl 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1664 SFPVTSASASAGAQPPVLVSGndTSSRIMPILSNRLCSSSLGNTVAISTVKTGHLASSVLISTTQPVVSPKCLTSALQIP 1743
Cdd:pfam17823 98 SEPATREGAADGAASRALAAA--ASSSPSSAAQSLPAAIAALPSEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAP 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1744 VTVALPTPATTSPKIINTVPHSAAVPGATRSVSISKRQSRTSLQFHSPGISTTVPTNVNTNKPQTELSSLSTSPDSAQVS 1823
Cdd:pfam17823 176 RTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALAT 255
|
....*...
gi 767954585 1824 MSITWDTV 1831
Cdd:pfam17823 256 LAAAAGTV 263
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
751-981 |
7.42e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 41.20 E-value: 7.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 751 RKTVIKSPTVpEFQLICTNLDELRELITKIENELKDLENSRKKSGKWYHRRQAVKELHSTlirllnellpwEPKLMKAfq 830
Cdd:PRK03918 450 RKELLEEYTA-ELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKEL-----------EEKLKKY-- 515
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 831 rNRSRLKKDYDDFRRQpdhdtfnRELWTTDEGE-----GDLGK----DSPKGEISKSIDSTEP-----LDILEKDHFDS- 895
Cdd:PRK03918 516 -NLEELEKKAEEYEKL-------KEKLIKLKGEikslkKELEKleelKKKLAELEKKLDELEEelaelLKELEELGFESv 587
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 896 --DDMKLSEIDfpmarsKLLKKELPSKDLPKTLLKTLKRQSKQTDYVDDSTKELSpRKKAKLSTNETTVENLESDvqidc 973
Cdd:PRK03918 588 eeLEERLKELE------PFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELA-ETEKRLEELRKELEELEKK----- 655
|
....*...
gi 767954585 974 FSESKHTE 981
Cdd:PRK03918 656 YSEEEYEE 663
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Bromodomain |
cd04369 |
Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear ... |
137-193 |
2.18e-11 |
|
Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
Pssm-ID: 99922 [Multi-domain] Cd Length: 99 Bit Score: 62.00 E-value: 2.18e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 767954585 137 MCLLQMEEKFASGQYGGITEFVADFRLMLETCYRLHGVDHWISKQGQKLEMMLEQKL 193
Cdd:cd04369 43 MDLSTIKKKLKNGEYKSLEEFEADVRLIFSNAKTYNGPGSPIYKDAKKLEKLFEKLL 99
|
|
| Bromo_BDF1_2_I |
cd05500 |
Bromodomain. BDF1/BDF2 like subfamily, restricted to fungi, repeat I. BDF1 and BDF2 are yeast ... |
137-193 |
7.48e-08 |
|
Bromodomain. BDF1/BDF2 like subfamily, restricted to fungi, repeat I. BDF1 and BDF2 are yeast transcription factors involved in the expression of a wide range of genes, including snRNAs; they are required for sporulation and DNA repair and protect histone H4 from deacetylation. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Pssm-ID: 99932 Cd Length: 103 Bit Score: 51.93 E-value: 7.48e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 767954585 137 MCLLQMEEKFASGQYGGITEFVADFRLMLETCYRLHGVDHWISKQGQKLEMMLEQKL 193
Cdd:cd05500 47 MDLGTIERKLKSNVYTSVEEFTADFNLMVDNCLTFNGPEHPVSQMGKRLQAAFEKHL 103
|
|
| Bromo_Brdt_II_like |
cd05498 |
Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET ... |
83-192 |
1.04e-07 |
|
Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Pssm-ID: 99930 Cd Length: 102 Bit Score: 51.51 E-value: 1.04e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 83 YRILGEFLQEKHRGLTAPFLQPLGGVATAEEEVAEGPrsggrggrafpQQPgqgMCLLQMEEKFASGQYGGITEFVADFR 162
Cdd:cd05498 6 SGILKELFSKKHKAYAWPFYKPVDPEALGLHDYHDII-----------KHP---MDLSTIKKKLDNREYADAQEFAADVR 71
|
90 100 110
....*....|....*....|....*....|
gi 767954585 163 LMLETCYRLHGVDHWISKQGQKLEMMLEQK 192
Cdd:cd05498 72 LMFSNCYKYNPPDHPVHAMARKLQDVFEDR 101
|
|
| Bromo_BDF1_2_II |
cd05499 |
Bromodomain. BDF1/BDF2 like subfamily, restricted to fungi, repeat II. BDF1 and BDF2 are yeast ... |
78-193 |
1.16e-07 |
|
Bromodomain. BDF1/BDF2 like subfamily, restricted to fungi, repeat II. BDF1 and BDF2 are yeast transcription factors involved in the expression of a wide range of genes, including snRNAs; they are required for sporulation and DNA repair and protect histone H4 from deacetylation. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Pssm-ID: 99931 Cd Length: 102 Bit Score: 51.52 E-value: 1.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 78 ELQQGYRILGEFLQEKHRGLTAPFLQPLGGVATaeeevaegprsggrggrafpQQPG------QGMCLLQMEEKFASGQY 151
Cdd:cd05499 1 ELKFCEEVLKELMKPKHSAYNWPFLDPVDPVAL--------------------NIPNyfsiikKPMDLGTISKKLQNGQY 60
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 767954585 152 GGITEFVADFRLMLETCYRLHGVDHWISKQGQKLEMMLEQKL 193
Cdd:cd05499 61 QSAKEFERDVRLIFKNCYTFNPEGTDVYMMGHQLEEVFNDKW 102
|
|
| BROMO |
smart00297 |
bromo domain; |
137-196 |
3.48e-07 |
|
bromo domain;
Pssm-ID: 197636 [Multi-domain] Cd Length: 107 Bit Score: 50.35 E-value: 3.48e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 137 MCLLQMEEKFASGQYGGITEFVADFRLMLETCYRLHGVDHWISKQGQKLEMMLEQKLALL 196
Cdd:smart00297 48 MDLKTIKKKLENGKYSSVEEFVADFNLMFSNARTYNGPDSEVYKDAKKLEKFFEKKLREL 107
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
1191-1557 |
1.90e-06 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 52.65 E-value: 1.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1191 TSVSNLLTPSvKTSQSEAGKAKNAVSAATFSLPSASPtiSSTGQPLSSTTTLNGSTNPGSSFncfaqqTADSSEAKQELK 1270
Cdd:pfam17823 84 TEVTAEHTPH-GTDLSEPATREGAADGAASRALAAAA--SSSPSSAAQSLPAAIAALPSEAF------SAPRAAACRANA 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1271 TVCIRDSQSILVRTRGGNTGVVKVQTNPDQNSPNTVSSSSVFTFAPQLQAFLVPKSTTSSSAfspvAGTTTTSSLSPFSQ 1350
Cdd:pfam17823 155 SAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAA----TATGHPAAGTALAA 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1351 TPTSVSIPASFAPSMGKNLKLTLGHTTGSGDLGHVIDKTSHMpSSPLkssicSSTLLPSTTSSSVSVISISAANFG-QNN 1429
Cdd:pfam17823 231 VGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINM-GDPH-----ARRLSPAKHMPSDTMARNPAAPMGaQAQ 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1430 ANIIHTPTKQQQVDYITKSYPvtrseataatngdvisgTPVQKLMLVSAPSILSSGNGTAInmtpalTSTGVSAQKLVFI 1509
Cdd:pfam17823 305 GPIIQVSTDQPVHNTAGEPTP-----------------SPSNTTLEPNTPKSVASTNLAVV------TTTKAQAKEPSAS 361
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 767954585 1510 NAPVPSGTSTPTLVAESlKQTLPPPLhkAYVKTPEQPQIVLIPSTVGT 1557
Cdd:pfam17823 362 PVPVLHTSMIPEVEATS-PTTQPSPL--LPTQGAAGPGILLAPEQVAT 406
|
|
| Hia |
COG5295 |
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, ... |
1137-1719 |
2.08e-06 |
|
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444098 [Multi-domain] Cd Length: 785 Bit Score: 52.85 E-value: 2.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1137 SSFPQTTNINSSLASVFVNSPGTVSTQLPNTAFNKTITplSNISSARPQPLSPVTSVSNLLTPSVKTSQSEAGKAKNAVS 1216
Cdd:COG5295 29 SATVTSAAQSTGSAATSSGSSSAAGGSGSTSSLTAAAA--TAGAGSGGTSATAASSVASGGASAATAASTGTGNTAGTAA 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1217 AATFSLPSASPTISSTGQPLSSTTTLNGSTNPGSSFncfAQQTADSSEAKQELKTVcIRDSQSILVRTRGGNTGVVKVQT 1296
Cdd:COG5295 107 TVAGAASSGSATNAGASAGASAAAAAGSTAAAGGAA---ASTGGSSAAGGSNTATA-TGSSTANAATAAAGATSTSASGS 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1297 NPdqNSPNTVSSSSVFTFAPQLQAFLVPKSTTSSSAFSPVAGTTTTSSLSPFSQTPTSVSIPASFAPSMGK-NLKLTLGH 1375
Cdd:COG5295 183 SS--GASGAAAASAATGASAGGTASAAASASSSATGTSASVGVNAGAATGSAASAGGSASAGAASGNATTAsASSVSGSA 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1376 TTGSGDLGHVIDKTSHMPSSPLKSSICSSTLLPSTTSSSVSVISISAANFGQNNANIIHTPTKQQQvdyITKSYPVTRSE 1455
Cdd:COG5295 261 VAAGTASTATTASTTAASGAAGTATAAAGGDAAAAGSASSTGAANATAGGGNAGSGGGGAAALGSA---GGSSGVGTASG 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1456 ATAATNGDVISGTPVQ---KLMLVSAPSILSSGNGTAINMTPALTSTGVSAQKLVFINAPVPSGTSTPTLVAESlkqtlp 1532
Cdd:COG5295 338 ASAAAATNDGTANGAGtsaAADATSGGGAGGGGAAATSSSGGSATAAGNAAGAAGAGSAGSGGSSTGASAGGGA------ 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1533 pplhKAYVKTPEQPQIVLIPSTVGTPIKINSSPAVSQIKDVKIGLNIGQAIVNTSGTVPAIPSINILQNVTPKGEDKSSK 1612
Cdd:COG5295 412 ----SAAGGAAAGSAAAGTSSNTSAVGASNGASGTSSSASSAGAAGGGTAGAGGAANVGAATTAASAAATAAAATSSAAI 487
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1613 GYILPLSTSGNSVPVSSNFVSQNITPVNESVVSSARAVNVLSVTGANLSLGSFPVTSASASAGAQPPVLVSGNDTSSRIM 1692
Cdd:COG5295 488 AGATATGAGAAAGGAGAGAAGGAGSAAAGGAANAAAASGATATAGSAGGGAAAAAGGGSTTAATGTNSVAVGNNTATGAN 567
|
570 580
....*....|....*....|....*..
gi 767954585 1693 PILSNRLCSSSLGNTVAISTVKTGHLA 1719
Cdd:COG5295 568 SVALGAGSVASGANSVSVGAAGAENVA 594
|
|
| Bromo_gcn5_like |
cd05509 |
Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates ... |
137-193 |
2.87e-05 |
|
Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Pssm-ID: 99941 [Multi-domain] Cd Length: 101 Bit Score: 44.47 E-value: 2.87e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 767954585 137 MCLLQMEEKFASGQYGGITEFVADFRLMLETCYRLHGVDHWISKQGQKLEMMLEQKL 193
Cdd:cd05509 42 MDLSTMEEKLENGYYVTLEEFVADLKLIFDNCRLYNGPDTEYYKCANKLEKFFWKKL 98
|
|
| Bromodomain |
pfam00439 |
Bromodomain; Bromodomains are 110 amino acid long domains, that are found in many chromatin ... |
137-184 |
3.54e-05 |
|
Bromodomain; Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Pssm-ID: 425683 [Multi-domain] Cd Length: 84 Bit Score: 43.84 E-value: 3.54e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 767954585 137 MCLLQMEEKFASGQYGGITEFVADFRLMLETCYRLHGVDHWISKQGQK 184
Cdd:pfam00439 37 MDLSTIKKKLENGEYKSLAEFLADVKLIFSNARTYNGPGSVIYKAAEK 84
|
|
| COG5076 |
COG5076 |
Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin ... |
137-186 |
3.78e-05 |
|
Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription];
Pssm-ID: 227408 [Multi-domain] Cd Length: 371 Bit Score: 48.26 E-value: 3.78e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 767954585 137 MCLLQMEEKFASGQYGGITEFVADFRLMLETCYRLHGVDHWISKQGQKLE 186
Cdd:COG5076 189 MDLLTIQKKLKNGRYKSFEEFVSDLNLMFDNCKLYNGPDSSVYVDAKELE 238
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
1668-1825 |
3.95e-05 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 47.21 E-value: 3.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1668 TSASASAGAQPPVLVSGNDTSSRIMPILSNrlcSSSLGNTVAISTVKTGHLASSVLISTTQPVVSPKCLTSALQIPVTva 1747
Cdd:PHA03255 28 GSSTASAGNVTGTTAVTTPSPSASGPSTNQ---STTLTTTSAPITTTAILSTNTTTVTSTGTTVTPVPTTSNASTINV-- 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1748 lpTPATTSPKIINTVPHSAAVPGATRSVSiSKRQSRTSLQFHSPGISTTVPT--NVNTNKPQTELSSLSTSPDSAQVSMS 1825
Cdd:PHA03255 103 --TTKVTAQNITATEAGTGTSTGVTSNVT-TRSSSTTSATTRITNATTLAPTlsSKGTSNATKTTAELPTVPDERQPSLS 179
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
1156-1370 |
6.56e-05 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 47.83 E-value: 6.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1156 SPGTVSTQLPNTAFNKTITPLSNISSARPQPLSPVTSVSNLLTPSVKTSQSEAGKAKNAVSAATFSLPSASPTiSSTGQP 1235
Cdd:COG3469 3 SVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSST-TSTTAT 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1236 LSSTTTLNGSTNPGSSFNCFAQQTADSSEAKQELKTVCIRDSQSILVRTrGGNTGVVKVQTNPDQNSPNTVSSSSVFTFA 1315
Cdd:COG3469 82 ATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTA-GSTTTSGASATSSAGSTTTTTTVSGTETAT 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 767954585 1316 PQlqAFLVPKSTTSSSAFSPVAGTTTTSSLSPFSQTPTSVSIPASFAPSMGKNLK 1370
Cdd:COG3469 161 GG--TTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGLP 213
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
1180-1760 |
1.17e-04 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 47.22 E-value: 1.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1180 SSARPQPLSPVTSVSNLLTPSVKTSQSEAGKAKNAVSAATFSLPSASPTISSTGQPLSSTTTlNGSTNPGSSFncfaqqt 1259
Cdd:pfam05109 312 SQDMPTNTTDITYVGDNATYSVPMVTSEDANSPNVTVTAFWAWPNNTETDFKCKWTLTSGTP-SGCENISGAF------- 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1260 adSSEAKQELKTVCIRDSQSILVRTRGGNTGVvkvqtnpdqnspnTVSSSSVFTFAPQlqaflvpkSTTSSSAFSPV--A 1337
Cdd:pfam05109 384 --ASNRTFDITVSGLGTAPKTLIITRTATNAT-------------TTTHKVIFSKAPE--------STTTSPTLNTTgfA 440
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1338 GTTTTSSLSPFSQTPTSVSIPASFAPSMGknlkltlghttgsgdlghVIDKTSHMPSSplkSSICSSTLLPSTTSssvsv 1417
Cdd:pfam05109 441 APNTTTGLPSSTHVPTNLTAPASTGPTVS------------------TADVTSPTPAG---TTSGASPVTPSPSP----- 494
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1418 isisaanfgQNNANIIHTPTKQQQVDYITKSYPVTRSEATAATNGDVISGTPVqkLMLVSAPSILSSGNGTAINMTPALT 1497
Cdd:pfam05109 495 ---------RDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPT--LGKTSPTSAVTTPTPNATSPTPAVT 563
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1498 STGVsaqklvfiNAPVPS-GTSTPTLVAeslkqTLPPPLHKAYVKTPEQPQIVLIPSTVGtpiKINSSPAV-SQIKDVKI 1575
Cdd:pfam05109 564 TPTP--------NATIPTlGKTSPTSAV-----TTPTPNATSPTVGETSPQANTTNHTLG---GTSSTPVVtSPPKNATS 627
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1576 GLNIGQAIVNTSGTVP-AIPSINILQNVTPKGEDKSSKGyiLPLSTSGNsvPVSSNFVSQnITPVNES---VVSSARAVN 1651
Cdd:pfam05109 628 AVTTGQHNITSSSTSSmSLRPSSISETLSPSTSDNSTSH--MPLLTSAH--PTGGENITQ-VTPASTSthhVSTSSPAPR 702
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1652 VLSVTGA----NLSLGSFP----VTSASASAGAQPPVLVSGNDTSSRIMPILSNRLCSSSLGNTVA-------------- 1709
Cdd:pfam05109 703 PGTTSQAsgpgNSSTSTKPgevnVTKGTPPKNATSPQAPSGQKTAVPTVTSTGGKANSTTGGKHTTghgartstepttdy 782
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 767954585 1710 ---ISTVKTGHLASSVLISTTQPVVSPK-CLTSAlqiPVTVA---LPTPATTSPKIIN 1760
Cdd:pfam05109 783 ggdSTTPRTRYNATTYLPPSTSSKLRPRwTFTSP---PVTTAqatVPVPPTSQPRFSN 837
|
|
| Bromo_tif1_like |
cd05502 |
Bromodomain; tif1_like subfamily. Tif1 (transcription intermediary factor 1) is a member of ... |
140-196 |
1.47e-04 |
|
Bromodomain; tif1_like subfamily. Tif1 (transcription intermediary factor 1) is a member of the tripartite motif (TRIM) protein family, which is characterized by a particular domain architecture. It functions by recruiting coactivators and/or corepressors to modulate transcription. Vertebrate Tif1-gamma, also labeled E3 ubiquitin-protein ligase TRIM33, plays a role in the control of hematopoiesis. Its homologue in Xenopus laevis, Ectodermin, has been shown to function in germ-layer specification and control of cell growth during embryogenesis. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Pssm-ID: 99934 [Multi-domain] Cd Length: 109 Bit Score: 43.05 E-value: 1.47e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 767954585 140 LQMEEkfaSGQYGGITEFVADFRLMLETCYRLHGVDHWISKQGQKLEMMLEQKLALL 196
Cdd:cd05502 53 LQPKS---PQHYSSPEEFVADVRLMFKNCYKFNEEDSEVAQAGKELELFFEEQLKEI 106
|
|
| CCDC34 |
pfam13904 |
Coiled-coil domain-containing protein 3; This family is found in eukaryotes; it has several ... |
250-288 |
2.10e-04 |
|
Coiled-coil domain-containing protein 3; This family is found in eukaryotes; it has several conserved tryptophan residues. The function is not known.
Pssm-ID: 464032 [Multi-domain] Cd Length: 221 Bit Score: 44.70 E-value: 2.10e-04
10 20 30 40
....*....|....*....|....*....|....*....|
gi 767954585 250 QVLRQEEQLRAKEEKRLREQERKEAEEASQKEIEEW-ERK 288
Cdd:pfam13904 65 QRQRQKELQAQKEEREKEEQEAELRKRLAKEKYQEWlQRK 104
|
|
| COG5099 |
COG5099 |
RNA-binding protein of the Puf family, translational repressor [Translation, ribosomal ... |
1141-1357 |
2.17e-04 |
|
RNA-binding protein of the Puf family, translational repressor [Translation, ribosomal structure and biogenesis];
Pssm-ID: 227430 [Multi-domain] Cd Length: 777 Bit Score: 46.28 E-value: 2.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1141 QTTNINSSLASVFVNSPGTVSTQLPNTAFNKTITPLSNISsarPQPLSPVTSVSNLLTPSVKTSQSEagKAKNAVSAATF 1220
Cdd:COG5099 5 TMNNLLPSIKSQLHHSKKSPPSSTTSQELMNGNSTPNSFS---PIPSKASSSATFTLNLPINNSVNH--KITSSSSSRRK 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1221 SLPSASPTISST--GQPLSSTTTLNGSTNPGSSFNCFAQQTADSSEAKQELKTVcirdSQSILVRTRGGNTGVVKVQTNP 1298
Cdd:COG5099 80 PSGSWSVAISSStsGSQSLLMELPSSSFNPSTSSRNKSNSALSSTQQGNANSSV----TLSSSTASSMFNSNKLPLPNPN 155
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 767954585 1299 DQNSPNTVSSSSVFTFAPQLQAFlvpKSTTSSSAFSPVAGTTTTSSLSPFSQTPTSVSI 1357
Cdd:COG5099 156 HSNSATTNQSGSSFINTPASSSS---QPLTNLVVSSIKRFPYLTSLSPFFNYLIDPSSD 211
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
1126-1248 |
3.98e-04 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 44.12 E-value: 3.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1126 PLQQKGTEQHCSSFPQTTNINSSLASVFVNSPGTVSTQLPNTAFNKTITPLSNISSARPQPLSPVTSVSNLLTPSVKTSQ 1205
Cdd:PHA03255 53 PSTNQSTTLTTTSAPITTTAILSTNTTTVTSTGTTVTPVPTTSNASTINVTTKVTAQNITATEAGTGTSTGVTSNVTTRS 132
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 767954585 1206 SEAGKAKNAVSAATfslpSASPTISSTGQPLSSTTTLNGSTNP 1248
Cdd:PHA03255 133 SSTTSATTRITNAT----TLAPTLSSKGTSNATKTTAELPTVP 171
|
|
| MAP7 |
pfam05672 |
MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is ... |
253-292 |
5.73e-04 |
|
MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is presumably controlled by tissue-specific microtubule-associated proteins (MAPs). The 115-kDa epithelial MAP (E-MAP-115/MAP7) has been identified as a microtubule-stabilising protein predominantly expressed in cell lines of epithelial origin. The binding of this microtubule associated protein is nucleotide independent.
Pssm-ID: 461709 [Multi-domain] Cd Length: 153 Bit Score: 42.34 E-value: 5.73e-04
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 767954585 253 RQEEQLRAKEEKRLRE--QERKEAEEASQKEIEEWERKLLAQ 292
Cdd:pfam05672 59 REEEARRLEEERRREEeeRQRKAEEEAEEREQREQEEQERLQ 100
|
|
| Selenoprotein_S |
pfam06936 |
Selenoprotein S (SelS); This family consists of several mammalian selenoprotein S (SelS) ... |
225-287 |
1.04e-03 |
|
Selenoprotein S (SelS); This family consists of several mammalian selenoprotein S (SelS) sequences. SelS is a plasma membrane protein and is present in a variety of tissues and cell types. Selenoprotein S (SelS) is an intrinsically disordered protein. It formsa selenosulfide bond between cys 174 and Sec 188, that has a redox potential -234 mV. In vitro, SelS is an efficient reductase that depends on the presence of selenocysteine. Due to the high reactivity, SelS also has peroxidase activity that can catalyze the reduction of hydrogen peroxide. It is also resistant to inactivation by hydrogen peroxide which might provide evolutionary advantage compared to cysteine containing peroxidases.
Pssm-ID: 462043 [Multi-domain] Cd Length: 192 Bit Score: 42.13 E-value: 1.04e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767954585 225 TSTRRRSTPRSLAGLTSGVF----ESIMVQVLRQEEQLRAKEEKrLREQERKEAEEASQKEIEEWER 287
Cdd:pfam06936 59 TALRQRSSDHSAATVDPDLVvkrqEALEASRLRMQEELDAQAEK-FKEKQKQLEEEKRRQKIEMWES 124
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
1107-1500 |
1.33e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 43.41 E-value: 1.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1107 PKNFVIQHKEGKAVAKE-----VPPLQQKGTEQHcsSFPQTTNINSSLASvfvnSPGTVSTQLPNTAFNKTITP-LSNIS 1180
Cdd:pfam17823 25 PRHFVLNKMWNGAGKQNasgdaVPRADNKSSEQ*--NFCAATAAPAPVTL----TKGTSAAHLNSTEVTAEHTPhGTDLS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1181 SARPQPLSPVTSVSNLLTPSVKTSQSEAGKAKNAVSAA----TFSLP-SASPTISSTGQPLSSTTTLNGSTNPGSSFNCF 1255
Cdd:pfam17823 99 EPATREGAADGAASRALAAAASSSPSSAAQSLPAAIAAlpseAFSAPrAAACRANASAAPRAAIAAASAPHAASPAPRTA 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1256 AQQT--ADSSEAKQELKTVCIRDSQSILVRTRGGNT----------GVVKVQTNPDQNSPNTVSSSSVFTFAPQLQAFLV 1323
Cdd:pfam17823 179 ASSTtaASSTTAASSAPTTAASSAPATLTPARGISTaatatghpaaGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAA 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1324 PKSTTSSSAFSPVAGTTTTSSLSPFSQTPTSVSIPASFAPSmgknlkltlghttGSGDLGHVIDKTSHMPssplkssICS 1403
Cdd:pfam17823 259 AAGTVASAAGTINMGDPHARRLSPAKHMPSDTMARNPAAPM-------------GAQAQGPIIQVSTDQP-------VHN 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1404 STLLPSTTSSSVSVISISAANFGQNNANIIhTPTKQQQVDYITKSYPVTRS------EATAATNgdviSGTPVQKLMLVS 1477
Cdd:pfam17823 319 TAGEPTPSPSNTTLEPNTPKSVASTNLAVV-TTTKAQAKEPSASPVPVLHTsmipevEATSPTT----QPSPLLPTQGAA 393
|
410 420
....*....|....*....|...
gi 767954585 1478 APSILSSGNGTAINMTPALTSTG 1500
Cdd:pfam17823 394 GPGILLAPEQVATEATAGTASAG 416
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
1587-1831 |
1.39e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 43.41 E-value: 1.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1587 SGTVPAIPSINILQNVTPKGEDKSSKGYILPLSTSGNSVPVSSNFVSQNITPVNESVVSSARAVNVLSVTGANLSLG--- 1663
Cdd:pfam17823 18 SHAAPADPRHFVLNKMWNGAGKQNASGDAVPRADNKSSEQ*NFCAATAAPAPVTLTKGTSAAHLNSTEVTAEHTPHGtdl 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1664 SFPVTSASASAGAQPPVLVSGndTSSRIMPILSNRLCSSSLGNTVAISTVKTGHLASSVLISTTQPVVSPKCLTSALQIP 1743
Cdd:pfam17823 98 SEPATREGAADGAASRALAAA--ASSSPSSAAQSLPAAIAALPSEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAP 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1744 VTVALPTPATTSPKIINTVPHSAAVPGATRSVSISKRQSRTSLQFHSPGISTTVPTNVNTNKPQTELSSLSTSPDSAQVS 1823
Cdd:pfam17823 176 RTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALAT 255
|
....*...
gi 767954585 1824 MSITWDTV 1831
Cdd:pfam17823 256 LAAAAGTV 263
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
1142-1380 |
2.98e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 42.60 E-value: 2.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1142 TTNINSSLASVFVNSPGTVSTQLPNTAFNKTIT-PLSNISSARPQPLSPV-----------TSVSNLLTPSVKTSQSEAG 1209
Cdd:pfam05109 517 TPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTtPTPNATSPTPAVTTPTpnatiptlgktSPTSAVTTPTPNATSPTVG 596
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1210 KAKNAVSAATFSL--PSASPTISS----------TGQ-PLSSTTTLNGSTNPGSSFNCFAQQTADSSEAKQELKTVCIRD 1276
Cdd:pfam05109 597 ETSPQANTTNHTLggTSSTPVVTSppknatsavtTGQhNITSSSTSSMSLRPSSISETLSPSTSDNSTSHMPLLTSAHPT 676
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1277 SQSILVRTRGGNTGVVKVQTNPDQNSPNTVSSSSvftfAPQLQAflvpkSTTSSSAFSPVAGTTTTSSLSPfsQTPTSVS 1356
Cdd:pfam05109 677 GGENITQVTPASTSTHHVSTSSPAPRPGTTSQAS----GPGNSS-----TSTKPGEVNVTKGTPPKNATSP--QAPSGQK 745
|
250 260
....*....|....*....|....*.
gi 767954585 1357 IPASFAPSMGKNLKLTLG--HTTGSG 1380
Cdd:pfam05109 746 TAVPTVTSTGGKANSTTGgkHTTGHG 771
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
1137-1673 |
3.31e-03 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 42.45 E-value: 3.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1137 SSFPQTTNINSSLASVFVNSPGTVSTQlpNTAFNKTITPLSNISSARPQPLSPVTSVSNLLTPSVKTSQSEAGKAKNAVS 1216
Cdd:COG3210 209 LANAGGGTAGGVASANSTLTGGVVAAG--TGAGVISTGGTDISSLSVAAGAGTGGAGGTGNAGNTTIGTTVTGTNATGSN 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1217 AATFSLPSASPTISSTGQPLSSTTTLNGSTNPGSSFNCFAQQTADSSEAKQELKTVCIRDSQSILVRTRGGNTGVVKVQT 1296
Cdd:COG3210 287 TAGASSGDTTTNGTSSVTGAGGTGVLGGGTAAGITTTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGSGLTGT 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1297 NPDQNSPNTVSSSSVFTFAPQLQAFLVPKSTTSSSAFSPVAGTTTTSSLSPFSQTPTSVSIPASFAPSMGKNLKLTLGHT 1376
Cdd:COG3210 367 GNGGGLTTAGAGTVASTVGTATASTGNASSTTVLGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTGGTI 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1377 TGSGDLGHVIDKTShmpsspLKSSICSSTLLPSTTSSSVSVISISAANFGQNNANIIHTPTKQQQVDYITKSYPVTRSEA 1456
Cdd:COG3210 447 GGLTGSGTTNGAGL------SGNTDVSGTGTVTNSAGNTTSATTLAGGGIGTVTTNATISNNAGGDANGIATGLTGITAG 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1457 TAATNGDVISGTPVQKLMLVSAPSILSSGNGTAINMTPALTSTGVSAQKLVFINAPVPSGTSTPTLVAESLKQTLPpplh 1536
Cdd:COG3210 521 GGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSNTANTLGVLAATGGTSNATTAGNSTSATGGTGTNS---- 596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1537 kayvktpeqpQIVLIPSTVGTPIKINSSPAVSQIKDVKIGLNIGQAIVNTSGTVPAIPSINILQNVTPKGedksSKGYIL 1616
Cdd:COG3210 597 ----------GGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAVGAALSGTGSGTTGTASA----NGSNTT 662
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 767954585 1617 PLSTSGNSVPVSSNFVSQNITPVNESVVSSARAVNVLSVTGANLSL--GSFPVTSASAS 1673
Cdd:COG3210 663 GVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTIstGSITVTGQIGA 721
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
1166-1503 |
5.21e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 41.83 E-value: 5.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1166 NTAFNKTITPLSNIssarPQPLSPVTSVSNLLTPSVKTSQSEAGKAKnavsaatfslpSASPTISSTGQPLSSTTT-LNG 1244
Cdd:pfam05109 386 NRTFDITVSGLGTA----PKTLIITRTATNATTTTHKVIFSKAPEST-----------TTSPTLNTTGFAAPNTTTgLPS 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1245 STNPGSSFNCFAQQTADSSEAKQELKTVCIRDSQSILVRTRGGNTGVVKVQTNPDQNSPntvsSSSVFTFAPQLQAFLVP 1324
Cdd:pfam05109 451 STHVPTNLTAPASTGPTVSTADVTSPTPAGTTSGASPVTPSPSPRDNGTESKAPDMTSP----TSAVTTPTPNATSPTPA 526
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1325 KSTTSSSAFSPVAGTTTTSSL----SPFSQTPT---SVSIPASFAPSMGKN-------------LKLTLGHTTGSGD-LG 1383
Cdd:pfam05109 527 VTTPTPNATSPTLGKTSPTSAvttpTPNATSPTpavTTPTPNATIPTLGKTsptsavttptpnaTSPTVGETSPQANtTN 606
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 1384 HVIDKTSHMP--SSP------------------------LKSSICSSTLLPSTTSSSVSVISISAANFGQNNANIIHTPT 1437
Cdd:pfam05109 607 HTLGGTSSTPvvTSPpknatsavttgqhnitssstssmsLRPSSISETLSPSTSDNSTSHMPLLTSAHPTGGENITQVTP 686
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 767954585 1438 KQQQVDYITKSYPVTRSEATAATNG-------------DVISGTPVQKLMLVSAPsilsSGNGTAInmtPALTSTGVSA 1503
Cdd:pfam05109 687 ASTSTHHVSTSSPAPRPGTTSQASGpgnsststkpgevNVTKGTPPKNATSPQAP----SGQKTAV---PTVTSTGGKA 758
|
|
| Casc1_N |
pfam15927 |
Cancer susceptibility candidate 1 N-terminus; This presumed domain is functionally ... |
256-293 |
6.75e-03 |
|
Cancer susceptibility candidate 1 N-terminus; This presumed domain is functionally uncharacterized. This domain family is found in eukaryotes, and is approximately 200 amino acids in length. The family is found in association with pfam12366. There are two completely conserved residues (N and W) that may be functionally important.
Pssm-ID: 464947 [Multi-domain] Cd Length: 201 Bit Score: 40.04 E-value: 6.75e-03
10 20 30
....*....|....*....|....*....|....*....
gi 767954585 256 EQLRAKEEKRLR-EQERKEAEEASQKEIEEWERKLLAQA 293
Cdd:pfam15927 1 ARLREEEEERLRaEEEEAERLEEERREEEEEERLAAEQD 39
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
751-981 |
7.42e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 41.20 E-value: 7.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 751 RKTVIKSPTVpEFQLICTNLDELRELITKIENELKDLENSRKKSGKWYHRRQAVKELHSTlirllnellpwEPKLMKAfq 830
Cdd:PRK03918 450 RKELLEEYTA-ELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKEL-----------EEKLKKY-- 515
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 831 rNRSRLKKDYDDFRRQpdhdtfnRELWTTDEGE-----GDLGK----DSPKGEISKSIDSTEP-----LDILEKDHFDS- 895
Cdd:PRK03918 516 -NLEELEKKAEEYEKL-------KEKLIKLKGEikslkKELEKleelKKKLAELEKKLDELEEelaelLKELEELGFESv 587
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767954585 896 --DDMKLSEIDfpmarsKLLKKELPSKDLPKTLLKTLKRQSKQTDYVDDSTKELSpRKKAKLSTNETTVENLESDvqidc 973
Cdd:PRK03918 588 eeLEERLKELE------PFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELA-ETEKRLEELRKELEELEKK----- 655
|
....*...
gi 767954585 974 FSESKHTE 981
Cdd:PRK03918 656 YSEEEYEE 663
|
|
| |
