|
Name |
Accession |
Description |
Interval |
E-value |
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
448-785 |
1.82e-17 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 87.30 E-value: 1.82e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 448 QAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAA 527
Cdd:COG1196 219 KEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELA 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 528 ELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVvpASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRA 607
Cdd:COG1196 299 RLEQDIARLEERRRELEERLEELEEELAELEEELEELEEEL--EELEEELEEAEEELEEAEAELAEAEEALLEAEAELAE 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 608 ELERERVCSVALSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRT 687
Cdd:COG1196 377 AEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEE 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 688 EAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALRDQVKDLQQQLQEAARDHSSVVALY 767
Cdd:COG1196 457 EEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAY 536
|
330
....*....|....*...
gi 768001184 768 RSHLLYAIQGQMDEDVQR 785
Cdd:COG1196 537 EAALEAALAAALQNIVVE 554
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
443-755 |
1.00e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 85.11 E-value: 1.00e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 443 RAALEQAREDLRDRDSRLRELEAAsacLDEARASRLLAEEEARGLRAELAqreearlEQSRELEVLREQLATARATGEQQ 522
Cdd:TIGR02168 676 RREIEELEEKIEELEEKIAELEKA---LAELRKELEELEEELEQLRKELE-------ELSRQISALRKDLARLEAEVEQL 745
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 523 RTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVVPAS---------------EHRRLQEEALELRGR 587
Cdd:TIGR02168 746 EERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKeelkalrealdelraELTLLNEEAANLRER 825
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 588 AASLEQEVVATGKEAARLRAELERERvcsvalsehERIVGtLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSE 667
Cdd:TIGR02168 826 LESLERRIAATERRLEDLEEQIEELS---------EDIES-LAAEIEELEELIEELESELEALLNERASLEEALALLRSE 895
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 668 RHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALRDQVK 747
Cdd:TIGR02168 896 LEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLK 975
|
....*...
gi 768001184 748 DLQQQLQE 755
Cdd:TIGR02168 976 RLENKIKE 983
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
482-792 |
1.70e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 77.67 E-value: 1.70e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 482 EEARGLRAELAQREeaRLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREAS 561
Cdd:COG1196 213 ERYRELKEELKELE--AELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEE 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 562 EALRQSVV-PASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERERVcsvALSEHERIVGTLQANVAQLEGQL 640
Cdd:COG1196 291 YELLAELArLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEE---ELEEAEEELEEAEAELAEAEEAL 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 641 EELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEV 720
Cdd:COG1196 368 LEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEA 447
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 768001184 721 FNLKEALKEQPAALATPEVEALRDQVKDLQQQLQEAARDHSSVVALYRSHLLYAIQGQMDEDVQRILSQILQ 792
Cdd:COG1196 448 AEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGL 519
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
492-756 |
5.06e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 76.25 E-value: 5.06e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 492 AQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQsvvpa 571
Cdd:TIGR02168 666 AKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEA----- 740
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 572 sEHRRLQEealelrgRAASLEQEVVATGKEAARLRAELERERVcsvALSEHERIVGTLQANVAQLEGQLEELGRRHEKTS 651
Cdd:TIGR02168 741 -EVEQLEE-------RIAQLSKELTELEAEIEELEERLEEAEE---ELAEAEAEIEELEAQIEQLKEELKALREALDELR 809
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 652 AEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQP 731
Cdd:TIGR02168 810 AELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEAL 889
|
250 260 270
....*....|....*....|....*....|.
gi 768001184 732 AAL------ATPEVEALRDQVKDLQQQLQEA 756
Cdd:TIGR02168 890 ALLrseleeLSEELRELESKRSELRRELEEL 920
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
413-752 |
9.85e-12 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 68.91 E-value: 9.85e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 413 EAEAGRLRERVREAEGSGASGGGGGDTTQL----RAALEQAREDLRDRDSRLRELeaasacLDEARASRLLAEEEARGLR 488
Cdd:PRK02224 275 EELAEEVRDLRERLEELEEERDDLLAEAGLddadAEAVEARREELEDRDEELRDR------LEECRVAAQAHNEEAESLR 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 489 AELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSV 568
Cdd:PRK02224 349 EDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELRERE 428
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 569 VPASEHRRLQEEALElrgraasLEQEVVATGKEAARLRAELERERVCsvALSEHERIVGTLQANVAQLEGQLEELGRRHE 648
Cdd:PRK02224 429 AELEATLRTARERVE-------EAEALLEAGKCPECGQPVEGSPHVE--TIEEDRERVEELEAELEDLEEEVEEVEERLE 499
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 649 KTSAEVfQVQREALFMKSERHAAEAQLATAE-------QQLRGLRTEA-----------ERARQAQSRAQEALDKAKEKD 710
Cdd:PRK02224 500 RAEDLV-EAEDRIERLEERREDLEELIAERRetieekrERAEELRERAaeleaeaeekrEAAAEAEEEAEEAREEVAELN 578
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 768001184 711 KKITELSKEVFNLkEALKEQPAALA--TPEVEALRDQVKDLQQQ 752
Cdd:PRK02224 579 SKLAELKERIESL-ERIRTLLAAIAdaEDEIERLREKREALAEL 621
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
438-763 |
6.02e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 66.24 E-value: 6.02e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 438 DTTQLRAALEQAREDL----RDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLA 513
Cdd:TIGR02169 668 FSRSEPAELQRLRERLeglkRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLS 747
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 514 taratgeqqrtaaaELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVVPA------SEHRRLQEEALELRGR 587
Cdd:TIGR02169 748 --------------SLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSripeiqAELSKLEEEVSRIEAR 813
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 588 AASLEQEVVATGKEAARLRAELERERVCSVALSEHERivgTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSE 667
Cdd:TIGR02169 814 LREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIK---SIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKE 890
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 668 RHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEkdkkitelskevfNLKEALKEQPAALATPEVEALRDQVK 747
Cdd:TIGR02169 891 RDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEE-------------ELSEIEDPKGEDEEIPEEELSLEDVQ 957
|
330
....*....|....*.
gi 768001184 748 DLQQQLQEAARDHSSV 763
Cdd:TIGR02169 958 AELQRVEEEIRALEPV 973
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
412-755 |
1.79e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 65.16 E-value: 1.79e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 412 AEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAREDLRdRDSRLRELEAASACLDEARASRLLAEEEARglRAEL 491
Cdd:PTZ00121 1092 ATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEAR-KAEDARKAEEARKAEDAKRVEIARKAEDAR--KAEE 1168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 492 AQREE--ARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVV 569
Cdd:PTZ00121 1169 ARKAEdaKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEE 1248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 570 PASEHRRLQEEAlelrgRAASLEQEVVATGKEAARLRAEL----ERERVCSVALSEHERIVGTLQANvAQLEGQLEELGR 645
Cdd:PTZ00121 1249 RNNEEIRKFEEA-----RMAHFARRQAAIKAEEARKADELkkaeEKKKADEAKKAEEKKKADEAKKK-AEEAKKADEAKK 1322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 646 RHEKTSAEVFQVQREAlfmKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKE 725
Cdd:PTZ00121 1323 KAEEAKKKADAAKKKA---EEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKK 1399
|
330 340 350
....*....|....*....|....*....|
gi 768001184 726 ALKEQPAALATPEVEALRDQVKDLQQQLQE 755
Cdd:PTZ00121 1400 AEEDKKKADELKKAAAAKKKADEAKKKAEE 1429
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
369-782 |
4.18e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 63.42 E-value: 4.18e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 369 AAEASEKLQVELETRIRGLEEALRQREREAAAELEAALGKCEAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQ 448
Cdd:COG1196 342 LEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEE 421
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 449 AREDLRDRDSRLRELEAASACLDEARASRLLAEEEArgLRAELAQREEARLEQSRELEVLREQLAT-ARATGEQQRTAAA 527
Cdd:COG1196 422 ELEELEEALAELEEEEEEEEEALEEAAEEEAELEEE--EEALLELLAELLEEAALLEAALAELLEElAEAAARLLLLLEA 499
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 528 ELGRARDAAEARVAELPAACEEARQGLAELREASEALRQsVVPASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRA 607
Cdd:COG1196 500 EADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEA-ALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLP 578
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 608 ELERERVCSVALSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREAL----FMKSERHAAEAQLATAEQQLR 683
Cdd:COG1196 579 LDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEaalrRAVTLAGRLREVTLEGEGGSA 658
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 684 GLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALRDQVKDLQQQLQEAARDHSSV 763
Cdd:COG1196 659 GGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELL 738
|
410
....*....|....*....
gi 768001184 764 VALYRSHLLYAIQGQMDED 782
Cdd:COG1196 739 EELLEEEELLEEEALEELP 757
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
445-678 |
8.52e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 62.63 E-value: 8.52e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 445 ALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQsrELEVLREQLATARAtgeqqrt 524
Cdd:COG4913 239 RAHEALEDAREQIELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEA--ELEELRAELARLEA------- 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 525 AAAELGRARDAAEARVAELPAACEEA-RQGLAELREASEALRQsvvpasEHRRLQEEALELRGRAASLEQEVVATGKEAA 603
Cdd:COG4913 310 ELERLEARLDALREELDELEAQIRGNgGDRLEQLEREIERLER------ELEERERRRARLEALLAALGLPLPASAEEFA 383
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 768001184 604 RLRAELERervcsvALSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATA 678
Cdd:COG4913 384 ALRAEAAA------LLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALRDALAEA 452
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
18-564 |
1.83e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 61.49 E-value: 1.83e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 18 LERQVQELQQLLVERQEEKESLGREVESLQSRLSLLENERENTSYDVTTLQDEEGELpdlpgaevllsrqlspsaQEHLA 97
Cdd:COG1196 272 LRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAEL------------------EEELE 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 98 SLQEQVAVLTRQNQELMEKVQILENFEKDETQMEVEALAEVIP-LALYDSLRAEFDQLRRQHAEALQALRQQETREVPRE 176
Cdd:COG1196 334 ELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEaEEELEELAEELLEALRAAAELAAQLEELEEAEEALL 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 177 EGAACGESEVAGATATKNgpthmELNGSVAPETKVNGAETIDEEAAGDETMEARTMEAEATGAEATGAEATGAKVTETkp 256
Cdd:COG1196 414 ERLERLEEELEELEEALA-----ELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEEL-- 486
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 257 TGAEVREMETTEEEANMETKPTGAQATDTETTGVEAMGVEATKTKAEEAEMQAYGVGAGQAEPPVTGTTNMEATGSRATG 336
Cdd:COG1196 487 AEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYL 566
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 337 MESTGVSATgvenpgveatvpgISAGPILHPGAAEASEKLQVELETRIRGLEEALRQREREAAAELEAALGKCEAAEAEA 416
Cdd:COG1196 567 KAAKAGRAT-------------FLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLE 633
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 417 GRLRERVREAEGSGASGGGGGDTTQLRAALEQAREDLRDRDSRLRELEAASAclDEARASRLLAEEEARGLRAELAQREE 496
Cdd:COG1196 634 AALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELA--ERLAEEELELEEALLAEEEEERELAE 711
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 768001184 497 ARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEAL 564
Cdd:COG1196 712 AEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
20-613 |
3.80e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.34 E-value: 3.80e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 20 RQVQELQQLLVERQEEKESLGREVESLQSRLSLLENERENTSYDVTTLQDEEGELpdlpGAEVLLSRQLSPSAQEHLASL 99
Cdd:COG1196 232 LKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEA----QAEEYELLAELARLEQDIARL 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 100 QEQVAVLTRQNQELMEKVQILENFEKDETQMEVEALAEViplalyDSLRAEFDQLRRQHAEALQALRQQETREVPREEGA 179
Cdd:COG1196 308 EERRRELEERLEELEEELAELEEELEELEEELEELEEEL------EEAEEELEEAEAELAEAEEALLEAEAELAEAEEEL 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 180 ACGESEVAGATATkngpthmelngsvapETKVNGAETIDEEAAGDETMEARTMEAEATGAEATGAEATGAKVTETKPTGA 259
Cdd:COG1196 382 EELAEELLEALRA---------------AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEE 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 260 EVREMETTEEEANmetkptgAQATDTETTGVEAMGVEATKTKAEEAEMQAYGVGAGQAEPPVTGTTNMEATGSRATGMES 339
Cdd:COG1196 447 AAEEEAELEEEEE-------ALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGL 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 340 TGVSATGVENPGVEATVPgisagpilhpgAAEASEKLQVELETRIRGLEEALRQREREAAAELEAALGKCEAAEAEAGRL 419
Cdd:COG1196 520 RGLAGAVAVLIGVEAAYE-----------AALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAAL 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 420 RERVREAEGSGASGGGGGDTTQLRAALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARL 499
Cdd:COG1196 589 AAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRR 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 500 EQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAElpaaceEARQGLAELREASEALRQSVVPASEHRRLQE 579
Cdd:COG1196 669 ELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAE------AEEERLEEELEEEALEEQLEAEREELLEELL 742
|
570 580 590
....*....|....*....|....*....|....
gi 768001184 580 EALELRGRAASLEQEVVATGKEAARLRAELERER 613
Cdd:COG1196 743 EEEELLEEEALEELPEPPDLEELERELERLEREI 776
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
368-748 |
4.06e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 60.54 E-value: 4.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 368 GAAEASEKLQVELETRIRGLEEALRQREREAAAEleaalgkcEAAEAEAGRLRERVREAEGSGASGGGggdttqlRAALE 447
Cdd:PTZ00121 1098 GKAEEAKKTETGKAEEARKAEEAKKKAEDARKAE--------EARKAEDARKAEEARKAEDAKRVEIA-------RKAED 1162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 448 QAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARAtgEQQRtaaa 527
Cdd:PTZ00121 1163 ARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKA--EEAK---- 1236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 528 elgraRDAAEARVAELPAACEEARQgLAELREASEALRQSVVPASEHRRLQE-EALELRGRAASLEQEVVATGKEAARLR 606
Cdd:PTZ00121 1237 -----KDAEEAKKAEEERNNEEIRK-FEEARMAHFARRQAAIKAEEARKADElKKAEEKKKADEAKKAEEKKKADEAKKK 1310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 607 AELERERvcsvalSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLR 686
Cdd:PTZ00121 1311 AEEAKKA------DEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAK 1384
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 768001184 687 TEAERARqaqsRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALRDQVKD 748
Cdd:PTZ00121 1385 KKAEEKK----KADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEE 1442
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
410-755 |
4.16e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 60.54 E-value: 4.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 410 EAAEAEAGRLRERVREAEgsgasgggggdttQLRAALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRA 489
Cdd:PTZ00121 1174 DAKKAEAARKAEEVRKAE-------------ELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAE 1240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 490 ELAQREEAR-LEQSRELEVLREQLATAR--ATGEQQRTAAAELGRA---RDAAEARVAELPAACEEARQGLAELREASEA 563
Cdd:PTZ00121 1241 EAKKAEEERnNEEIRKFEEARMAHFARRqaAIKAEEARKADELKKAeekKKADEAKKAEEKKKADEAKKKAEEAKKADEA 1320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 564 LRQsvvpaSEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERERVCSVAL-SEHERIVGTLQANVAQLEGQLEE 642
Cdd:PTZ00121 1321 KKK-----AEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKkKEEAKKKADAAKKKAEEKKKADE 1395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 643 LGRRHEKTSAEVFQVQR-EALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEAlDKAKEKDKKITELSKEVF 721
Cdd:PTZ00121 1396 AKKKAEEDKKKADELKKaAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEA-KKAEEAKKKAEEAKKADE 1474
|
330 340 350
....*....|....*....|....*....|....
gi 768001184 722 NLKEALKEQPAALATPEVEALRDQVKDLQQQLQE 755
Cdd:PTZ00121 1475 AKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEA 1508
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
489-799 |
1.06e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 58.91 E-value: 1.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 489 AELAQREEARLEQSRELE--VLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALrq 566
Cdd:TIGR02168 209 AEKAERYKELKAELRELElaLLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEEL-- 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 567 svvpasehrrlQEEALELRGRAASLEQEVVATGKEAARLRAELERervCSVALSEHERIVGTLQANVAQLEGQLEELGRR 646
Cdd:TIGR02168 287 -----------QKELYALANEISRLEQQKQILRERLANLERQLEE---LEAQLEELESKLDELAEELAELEEKLEELKEE 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 647 HEKTSAEVfqvqrealfmkserHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEK----DKKITELSKEVFN 722
Cdd:TIGR02168 353 LESLEAEL--------------EELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEierlEARLERLEDRRER 418
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 768001184 723 LKEALKEQPAALATPEVEALRDQVKDLQQQLQEAARDHSSVVAlyrshLLYAIQGQMDEDVQRILSQILQMQRLQAQ 799
Cdd:TIGR02168 419 LQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEE-----ALEELREELEEAEQALDAAERELAQLQAR 490
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
156-764 |
2.21e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 58.23 E-value: 2.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 156 RQHAEALQALRQQETREVPREEGAACGESEVAGATATKNGPTHMELNGSVAPETKVNGAETIDEEAAGDEtmEARTMEAE 235
Cdd:PTZ00121 1212 RKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKAD--ELKKAEEK 1289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 236 ATGAEATGAEATgAKVTETKPTGAEVREMETTEEEANMETKPTGAQATDTETTGVEAmgvEATKTKAEEAEMQAygvgAG 315
Cdd:PTZ00121 1290 KKADEAKKAEEK-KKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAA---EAAKAEAEAAADEA----EA 1361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 316 QAEPPVTGTTNMEATGSRATGMESTGVSATGVENPGVEATVPGISAGPIlhpGAAEASEKLQVELETR---IRGLEEALR 392
Cdd:PTZ00121 1362 AEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADEL---KKAAAAKKKADEAKKKaeeKKKADEAKK 1438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 393 QREREAAAELEAALGKCEAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAR---EDLRDRDSRLRELEAASAC 469
Cdd:PTZ00121 1439 KAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKkkaDEAKKAAEAKKKADEAKKA 1518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 470 LDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLRE-----QLATARATGEQQRTAAAELGRARDAAEARVAELP 544
Cdd:PTZ00121 1519 EEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKaeekkKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVM 1598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 545 AACEEARQGLAE-LREASEALrqsvVPASEHRRLQEEALELRGRAASLEQEVvatgKEAARLRAELERERVCSVAL---S 620
Cdd:PTZ00121 1599 KLYEEEKKMKAEeAKKAEEAK----IKAEELKKAEEEKKKVEQLKKKEAEEK----KKAEELKKAEEENKIKAAEEakkA 1670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 621 EHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREAlfmKSERHAAEaQLATAEQQLRGLRTEAERARQAQSRAQ 700
Cdd:PTZ00121 1671 EEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKE---AEEKKKAE-ELKKAEEENKIKAEEAKKEAEEDKKKA 1746
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 768001184 701 EALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALRDQVKDLQQQLQEAARDHSSVV 764
Cdd:PTZ00121 1747 EEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANI 1810
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
377-612 |
1.00e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 55.69 E-value: 1.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 377 QVELETRIRGLEEALRQREREAAaeleaalgKCEAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAREDLRDR 456
Cdd:COG4913 250 QIELLEPIRELAERYAAARERLA--------ELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDAL 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 457 DSRLRELEAASACLDEARASRLlaEEEARGLRAELAQREEARLEQSRELEVLREQLAtaratgeqqrTAAAELGRARDAA 536
Cdd:COG4913 322 REELDELEAQIRGNGGDRLEQL--EREIERLERELEERERRRARLEALLAALGLPLP----------ASAEEFAALRAEA 389
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 768001184 537 EARVAELPAACEEARQGLAELREASEALRQsvvpasEHRRLQEEALELRGRAASLEQEVVAtgkeaarLRAELERE 612
Cdd:COG4913 390 AALLEALEEELEALEEALAEAEAALRDLRR------ELRELEAEIASLERRKSNIPARLLA-------LRDALAEA 452
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
480-736 |
1.95e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 54.92 E-value: 1.95e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 480 AEEEARGLRAELAQREEARleqsRELEVLREQ---LATARATGEQQRTAAAELGRARDAAEARVAElpaaceEARQGLAE 556
Cdd:COG4913 223 TFEAADALVEHFDDLERAH----EALEDAREQielLEPIRELAERYAAARERLAELEYLRAALRLW------FAQRRLEL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 557 LREASEALRQsvvpasEHRRLQEEALELRGRAASLEQEVVATgkEAARLRAELERERVCSVALSEHERIVGTLQANVAQL 636
Cdd:COG4913 293 LEAELEELRA------ELARLEAELERLEARLDALREELDEL--EAQIRGNGGDRLEQLEREIERLERELEERERRRARL 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 637 EGQLEELGRRHEkTSAEVFQVQREalfmkserhAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDkakEKDKKITEL 716
Cdd:COG4913 365 EALLAALGLPLP-ASAEEFAALRA---------EAAALLEALEEELEALEEALAEAEAALRDLRRELR---ELEAEIASL 431
|
250 260
....*....|....*....|
gi 768001184 717 SKEVFNLKEALKEQPAALAT 736
Cdd:COG4913 432 ERRKSNIPARLLALRDALAE 451
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
554-759 |
5.93e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 53.52 E-value: 5.93e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 554 LAELREASEALRQSVVPASEHRRLQEEALELRGRAASLEQEvvatgkeaaRLRAELERERVcsvALSEHERIVGTLQANV 633
Cdd:TIGR02168 195 LNELERQLKSLERQAEKAERYKELKAELRELELALLVLRLE---------ELREELEELQE---ELKEAEEELEELTAEL 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 634 AQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERA----RQAQSRAQEALDKAKEK 709
Cdd:TIGR02168 263 QELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELeaqlEELESKLDELAEELAEL 342
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 768001184 710 DKKITELSKEVFNLKEALKEQPAalatpEVEALRDQVKDLQQQLQEAARD 759
Cdd:TIGR02168 343 EEKLEELKEELESLEAELEELEA-----ELEELESRLEELEEQLETLRSK 387
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
389-562 |
6.99e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.00 E-value: 6.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 389 EALRQREREAAAELEAALGKCEAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAREDLRDRDSRLRELEAASA 468
Cdd:COG4913 613 AALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREIAELEAELERLDASSDDLAALEE 692
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 469 CLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACE 548
Cdd:COG4913 693 QLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLE 772
|
170
....*....|....
gi 768001184 549 EARQGLAELREASE 562
Cdd:COG4913 773 ERIDALRARLNRAE 786
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
389-758 |
8.36e-07 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 53.03 E-value: 8.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 389 EALRQREREAAAELeaalgkcEAAEAEAGRLRERVReaegsgasgggggdttqLRAALEQAREDLRDRDSRLRE----LE 464
Cdd:COG3096 316 EELSARESDLEQDY-------QAASDHLNLVQTALR-----------------QQEKIERYQEDLEELTERLEEqeevVE 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 465 AASACLDEARASRLLAEEEARGLRAELAQREEA-RLEQSRELEVLREQLATARAtgeQQRTAAAELgrARDAAEARVAEL 543
Cdd:COG3096 372 EAAEQLAEAEARLEAAEEEVDSLKSQLADYQQAlDVQQTRAIQYQQAVQALEKA---RALCGLPDL--TPENAEDYLAAF 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 544 PAACEEARQGLAElreaseaLRQSVVPASEHRRLQEEALEL---------RGRAASLEQEVVatgKEAARLRAELERERV 614
Cdd:COG3096 447 RAKEQQATEEVLE-------LEQKLSVADAARRQFEKAYELvckiageveRSQAWQTARELL---RRYRSQQALAQRLQQ 516
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 615 CSVALSEHERivgtLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAE--RA 692
Cdd:COG3096 517 LRAQLAELEQ----RLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEqlRA 592
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 768001184 693 RQAQSRAQE-ALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEA--LRDQVKDLQQQLQEAAR 758
Cdd:COG3096 593 RIKELAARApAWLAAQDALERLREQSGEALADSQEVTAAMQQLLEREREAtvERDELAARKQALESQIE 661
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
453-795 |
9.24e-07 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 52.65 E-value: 9.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 453 LRDRDSRLRELEAASAC---LDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLA---TARATGEQQRTAA 526
Cdd:PRK04863 275 MRHANERRVHLEEALELrreLYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNlvqTALRQQEKIERYQ 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 527 AELgrarDAAEARVAELPAACEEARQGLAELREASEALRQSV-------------VPASEHRRLQ--------EEALELR 585
Cdd:PRK04863 355 ADL----EELEERLEEQNEVVEEADEQQEENEARAEAAEEEVdelksqladyqqaLDVQQTRAIQyqqavqalERAKQLC 430
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 586 GRAA-------SLEQEVVATGKEAARLRAELERE-RVCSVALSEHE-------RIVGTLQANVAQLEGQleELGRRHEKT 650
Cdd:PRK04863 431 GLPDltadnaeDWLEEFQAKEQEATEELLSLEQKlSVAQAAHSQFEqayqlvrKIAGEVSRSEAWDVAR--ELLRRLREQ 508
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 651 SAEVFQVQrealfmkserhAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQ 730
Cdd:PRK04863 509 RHLAEQLQ-----------QLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEA 577
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 768001184 731 PAalatpEVEALRDQVKDLQQQLQE-AARDHSSVVALYRSHLLYAIQGQMDEDVQRILSQILQMQR 795
Cdd:PRK04863 578 RE-----RRMALRQQLEQLQARIQRlAARAPAWLAAQDALARLREQSGEEFEDSQDVTEYMQQLLE 638
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
410-734 |
9.38e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 52.84 E-value: 9.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 410 EAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAalEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRA 489
Cdd:PTZ00121 1532 EAKKADEAKKAEEKKKADELKKAEELKKAEEKKKA--EEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKA 1609
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 490 ELAQREE---ARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQ 566
Cdd:PTZ00121 1610 EEAKKAEeakIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKK 1689
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 567 SvvpASEHRRLQEEALELRGRAASLEQEVvatgKEAARLRAELE--RERVCSVALSEHERIVGTLQANVAQLEGQLEELG 644
Cdd:PTZ00121 1690 A---AEALKKEAEEAKKAEELKKKEAEEK----KKAEELKKAEEenKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHL 1762
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 645 RRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITelsKEVFNLK 724
Cdd:PTZ00121 1763 KKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAI---KEVADSK 1839
|
330
....*....|
gi 768001184 725 EALKEQPAAL 734
Cdd:PTZ00121 1840 NMQLEEADAF 1849
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
480-756 |
2.19e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 51.68 E-value: 2.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 480 AEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEqqrtaaaelgrARDAAEARVAELPAACEEARQgLAELRE 559
Cdd:PTZ00121 1092 ATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEE-----------ARKAEDARKAEEARKAEDAKR-VEIARK 1159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 560 ASEALRQSVVPASEHRRLQEE---ALELRgRAASLEQEVVATGKEAARlRAELEReRVCSVALSEHERIVGTL------- 629
Cdd:PTZ00121 1160 AEDARKAEEARKAEDAKKAEAarkAEEVR-KAEELRKAEDARKAEAAR-KAEEER-KAEEARKAEDAKKAEAVkkaeeak 1236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 630 ----QANVAQLEGQLEELgRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRT--EAERARQAQSRAQEAl 703
Cdd:PTZ00121 1237 kdaeEAKKAEEERNNEEI-RKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKaeEKKKADEAKKKAEEA- 1314
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 768001184 704 DKAKEKDKKITELSKEVFNLKEALKE--QPAALATPEVEALRDQVKDLQQQLQEA 756
Cdd:PTZ00121 1315 KKADEAKKKAEEAKKKADAAKKKAEEakKAAEAAKAEAEAAADEAEAAEEKAEAA 1369
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
369-799 |
6.28e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.91 E-value: 6.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 369 AAEASEKLQVELETRIRGLEEALRQREREAaaeleaalgkcEAAEAEAGRLRERVREAEGSGASgggggdttQLRAALEQ 448
Cdd:COG4913 289 RLELLEAELEELRAELARLEAELERLEARL-----------DALREELDELEAQIRGNGGDRLE--------QLEREIER 349
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 449 AREDLRDRDSRLRELEAASACLDEA----RASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRT 524
Cdd:COG4913 350 LERELEERERRRARLEALLAALGLPlpasAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIA 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 525 A--------AAELGRARD----AAEARVAELPAACEearqgLAELREASEALRQSV------------VPASEHRRLQE- 579
Cdd:COG4913 430 SlerrksniPARLLALRDalaeALGLDEAELPFVGE-----LIEVRPEEERWRGAIervlggfaltllVPPEHYAAALRw 504
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 580 -EALELRGRaasLEQEVVATGKEAARLRAELERERVCSVALSEH------ERIVGTLQA-----NVAQL---------EG 638
Cdd:COG4913 505 vNRLHLRGR---LVYERVRTGLPDPERPRLDPDSLAGKLDFKPHpfrawlEAELGRRFDyvcvdSPEELrrhpraitrAG 581
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 639 QLEELGRRHEK------TSAEVF----QVQREALfmKSERHAAEAQLATAEQQLRGLRTEaERARQAQSRAQEALDKAKE 708
Cdd:COG4913 582 QVKGNGTRHEKddrrriRSRYVLgfdnRAKLAAL--EAELAELEEELAEAEERLEALEAE-LDALQERREALQRLAEYSW 658
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 709 KDKKITELSKEVFNLKEALKEqpAALATPEVEALRDQVKDLQQQLQEAARdhssvvalyRSHLLYAIQGQMDEDVQRILS 788
Cdd:COG4913 659 DEIDVASAEREIAELEAELER--LDASSDDLAALEEQLEELEAELEELEE---------ELDELKGEIGRLEKELEQAEE 727
|
490
....*....|.
gi 768001184 789 QILQMQRLQAQ 799
Cdd:COG4913 728 ELDELQDRLEA 738
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
370-720 |
8.15e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 49.65 E-value: 8.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 370 AEASEKLQVELETRIRGLEEALRQREREAaaeleaalgkcEAAEAEAGRLRERVREAEGSGASGGGGGDTtqLRAALEQA 449
Cdd:PRK02224 309 AEAVEARREELEDRDEELRDRLEECRVAA-----------QAHNEEAESLREDADDLEERAEELREEAAE--LESELEEA 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 450 REDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAEL 529
Cdd:PRK02224 376 REAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEAGKCP 455
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 530 GRARDAAEARVAELPAACEEARQGLAELREASEALRQSVvpASEHRRLqEEALELRGRAASLEQEVVATGKEAARLRAEL 609
Cdd:PRK02224 456 ECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEV--EERLERA-EDLVEAEDRIERLEERREDLEELIAERRETI 532
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 610 ERERVcsvALSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHA---AEAQLATAEQQLRGLR 686
Cdd:PRK02224 533 EEKRE---RAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESlerIRTLLAAIADAEDEIE 609
|
330 340 350
....*....|....*....|....*....|....
gi 768001184 687 TEAERARQAQSRAQEALDKAKEKDKKITELSKEV 720
Cdd:PRK02224 610 RLREKREALAELNDERRERLAEKRERKRELEAEF 643
|
|
| FUSC |
pfam04632 |
Fusaric acid resistance protein family; This family includes a conserved region found in two ... |
410-577 |
1.78e-05 |
|
Fusaric acid resistance protein family; This family includes a conserved region found in two proteins associated with fusaric acid resistance, from Burkholderia cepacia and Klebsiella oxytoca. These proteins are likely to be membrane transporter proteins.
Pssm-ID: 428044 [Multi-domain] Cd Length: 655 Bit Score: 48.43 E-value: 1.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 410 EAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAR---EDLRDRDSRLRELEAASAcldearasRLLAEeeARG 486
Cdd:pfam04632 167 DALRLAAAALAGAPGAEAFEAARLRLAADILALEALRSHAAfesPRGRARARALRRLLARML--------ALLPR--LRS 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 487 LRAELAQREEARLEQSRELEVLREQLATARATGEQQ---------RTAAAELGRARDAAEARVAELPAACEEARQGLAEL 557
Cdd:pfam04632 237 LARLLARLRTEGAGTVPELAALLDELAAWEAALAAEalqaalaalRARLRALRPALPLDFDTAAELLARLADLLAELAEA 316
|
170 180
....*....|....*....|
gi 768001184 558 REASEALRQSVVPASEHRRL 577
Cdd:pfam04632 317 LASCRALRHPIAQGARPARL 336
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
455-661 |
4.56e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.68 E-value: 4.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 455 DRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARD 534
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 535 AAEARVAE-LPAACEEARQGLAEL----REASEALRQSVVPASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAEL 609
Cdd:COG4942 101 AQKEELAElLRALYRLGRQPPLALllspEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALL 180
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 768001184 610 ERERVCSVAL----SEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREA 661
Cdd:COG4942 181 AELEEERAALealkAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
442-757 |
6.20e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 46.60 E-value: 6.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 442 LRAALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEeARGLRAELAQREEARLEQ-SRELEVLREQLATARAtge 520
Cdd:PRK03918 464 IEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQ-LKELEEKLKKYNLEELEKkAEEYEKLKEKLIKLKG--- 539
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 521 QQRTAAAELGRARDAaEARVAELPAACEEARQGLAELreasealrqsvvpaseHRRLQEEAL----ELRGRAASLE---Q 593
Cdd:PRK03918 540 EIKSLKKELEKLEEL-KKKLAELEKKLDELEEELAEL----------------LKELEELGFesveELEERLKELEpfyN 602
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 594 EVVATGKEAARLRAELERERVCSVALSEHERIVGTLQANVAQLEGQLEELGRRHektSAEVFQVQREALFMKSERHAaea 673
Cdd:PRK03918 603 EYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKY---SEEEYEELREEYLELSRELA--- 676
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 674 qlataeqqlrGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALkeqpaalatPEVEALRDQVKDLQQQL 753
Cdd:PRK03918 677 ----------GLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKAL---------ERVEELREKVKKYKALL 737
|
....
gi 768001184 754 QEAA 757
Cdd:PRK03918 738 KERA 741
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
369-645 |
7.73e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 46.59 E-value: 7.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 369 AAEASEKLQVELETRIRGLEEALRQREREAAAELEAALGKCEAAEAEAGRLRERVREAEGSGASGGGGGDttQLRAALEQ 448
Cdd:TIGR02168 737 RLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALD--ELRAELTL 814
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 449 AREDLRDRDSRL----RELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRT 524
Cdd:TIGR02168 815 LNEEAANLRERLesleRRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRS 894
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 525 AAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQsvvpasehrRLQEEALELRGRAASLEQEVVATGKEAAR 604
Cdd:TIGR02168 895 ELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEV---------RIDNLQERLSEEYSLTLEEAEALENKIED 965
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 768001184 605 LRAELERErvcsvalseherivgtlqanVAQLEGQLEELGR 645
Cdd:TIGR02168 966 DEEEARRR--------------------LKRLENKIKELGP 986
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
18-143 |
9.45e-05 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 45.34 E-value: 9.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 18 LERQVQELQQLLVERQEEKESLGREVESLQSRLSLLENERENTSYDVTTLQDEEGELP---DLPGAEVLLSRQLSPSAQE 94
Cdd:PRK09039 58 LNSQIAELADLLSLERQGNQDLQDSVANLRASLSAAEAERSRLQALLAELAGAGAAAEgraGELAQELDSEKQVSARALA 137
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 768001184 95 HLASLQEQVAVLTRQNQELMEKVQILENFEKdETQMEVEALAEVIPLAL 143
Cdd:PRK09039 138 QVELLNQQIAALRRQLAALEAALDASEKRDR-ESQAKIADLGRRLNVAL 185
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
520-756 |
1.04e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.78 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 520 EQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASealrQSVVPASEHRRLQEEALELRGRAASLEQEVVATG 599
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKN----GLVDLSEEAKLLLQQLSELESQLAEARAELAEAE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 600 KEAARLRAELERERVCSVALSEHERIvGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREalfmkseRHAAEAQLATAE 679
Cdd:COG3206 240 ARLAALRAQLGSGPDALPELLQSPVI-QQLRAQLAELEAELAELSARYTPNHPDVIALRAQ-------IAALRAQLQQEA 311
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 768001184 680 QQ-LRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEalkeqpaalatpEVEALRDQVKDLQQQLQEA 756
Cdd:COG3206 312 QRiLASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLER------------EVEVARELYESLLQRLEEA 377
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
445-758 |
1.38e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 45.72 E-value: 1.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 445 ALEQAREDLRDRDSRLRELEAASA----CLDEARASRLLAEEEARGLRAELAQREEA-RLEQSRELEVLREQLATARAtg 519
Cdd:PRK04863 349 KIERYQADLEELEERLEEQNEVVEeadeQQEENEARAEAAEEEVDELKSQLADYQQAlDVQQTRAIQYQQAVQALERA-- 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 520 eQQRTAAAELgrARDAAEARVAELPAACEEARQglaELREASEALRQsvvpASEHRRLQEEALELrgraasleqevvatg 599
Cdd:PRK04863 427 -KQLCGLPDL--TADNAEDWLEEFQAKEQEATE---ELLSLEQKLSV----AQAAHSQFEQAYQL--------------- 481
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 600 keAARLRAELERERVCSVA---LSEHERIVgTLQANVAQLEGQLEELGRRHEKtSAEVFQVQREALfMKSERH-----AA 671
Cdd:PRK04863 482 --VRKIAGEVSRSEAWDVArelLRRLREQR-HLAEQLQQLRMRLSELEQRLRQ-QQRAERLLAEFC-KRLGKNlddedEL 556
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 672 EAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEA---LKEQ-PAALATPEvealrdQVK 747
Cdd:PRK04863 557 EQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDAlarLREQsGEEFEDSQ------DVT 630
|
330
....*....|.
gi 768001184 748 DLQQQLQEAAR 758
Cdd:PRK04863 631 EYMQQLLERER 641
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
458-568 |
1.95e-04 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 45.07 E-value: 1.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 458 SRLR-ELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSR-ELEVLREQLATARATGEQQRTAAAELGRARDA 535
Cdd:COG0542 400 ARVRmEIDSKPEELDELERRLEQLEIEKEALKKEQDEASFERLAELRdELAELEEELEALKARWEAEKELIEEIQELKEE 479
|
90 100 110
....*....|....*....|....*....|...
gi 768001184 536 AEARVAELPAACEEARQGLAELREASEALRQSV 568
Cdd:COG0542 480 LEQRYGKIPELEKELAELEEELAELAPLLREEV 512
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
369-763 |
1.97e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 45.05 E-value: 1.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 369 AAEASEKLQVELETRIRGLE---EALRQREREAAAELEAALGKCEAAEAEAGRLRERVREAEGSGASGGGGGDTTQLR-- 443
Cdd:TIGR02168 359 ELEELEAELEELESRLEELEeqlETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKel 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 444 ----AALEQAREDLRDRDSRLRE-LEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLAtarat 518
Cdd:TIGR02168 439 qaelEELEEELEELQEELERLEEaLEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLK----- 513
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 519 geQQRTAAAELGRARDAAEARV---AELPAACEEARQ-----GLAELREASEALRQS--------VVPASEHRRLQEEAL 582
Cdd:TIGR02168 514 --NQSGLSGILGVLSELISVDEgyeAAIEAALGGRLQavvveNLNAAKKAIAFLKQNelgrvtflPLDSIKGTEIQGNDR 591
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 583 ELR-------GRAASLEQE----------------VVATGKEAARLRAELERE------------RVCSVALSEHERIVG 627
Cdd:TIGR02168 592 EILkniegflGVAKDLVKFdpklrkalsyllggvlVVDDLDNALELAKKLRPGyrivtldgdlvrPGGVITGGSAKTNSS 671
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 628 TL--QANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDK 705
Cdd:TIGR02168 672 ILerRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQ 751
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 768001184 706 A----KEKDKKITELSKEVFNLKEALKEQPAalatpEVEALRDQVKDLQQQLQEAARDHSSV 763
Cdd:TIGR02168 752 LskelTELEAEIEELEERLEEAEEELAEAEA-----EIEELEAQIEQLKEELKALREALDEL 808
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
489-718 |
2.23e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.37 E-value: 2.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 489 AELAQREEARLEQ-SRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQS 567
Cdd:COG4942 19 ADAAAEAEAELEQlQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 568 VVPASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERErvcsvALSEHERIVGTLQANVAQLEGQLEELGRRH 647
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKY-----LAPARREQAEELRADLAELAALRAELEAER 173
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 768001184 648 EKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSK 718
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| PLN03237 |
PLN03237 |
DNA topoisomerase 2; Provisional |
69-302 |
3.01e-04 |
|
DNA topoisomerase 2; Provisional
Pssm-ID: 215641 [Multi-domain] Cd Length: 1465 Bit Score: 44.47 E-value: 3.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 69 DEEGELPDLPgaEVLLSRQLSPSAQEHLASLQeqVAVLTrqnqelMEKVQILENfEKDETQMEVEALAEVIPLALY---- 144
Cdd:PLN03237 1090 DDAAEEEEEI--DVSSSSGVRGSDYDYLLSMA--IGTLT------LEKVQELCA-DRDKLNIEVEDLKKTTPKSLWlkdl 1158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 145 DSLRAEFDQLRRQHAEALQALRQQetrevprEEGAACGESEvAGATATKNGPThmelngsvAPETKVNGAETIDEEAAgD 224
Cdd:PLN03237 1159 DALEKELDKLDKEDAKAEEAREKL-------QRAAARGESG-AAKKVSRQAPK--------KPAPKKTTKKASESETT-E 1221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 225 ETMEARTMEAEATGAEA-----TGAEATGAKVTETKPTGAEVREMETTEEEANMETKPTGAQATDTETTGVEAMGVEATK 299
Cdd:PLN03237 1222 ETYGSSAMETENVAEVVkpkgrAGAKKKAPAAAKEKEEEDEILDLKDRLAAYNLDSAPAQSAKMEETVKAVPARRAAARK 1301
|
...
gi 768001184 300 TKA 302
Cdd:PLN03237 1302 KPL 1304
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
623-799 |
3.57e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 44.24 E-value: 3.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 623 ERIVGTLQANVAQLEGQLEELGRRHEKTSAEV--FQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQ 700
Cdd:COG3206 167 ELRREEARKALEFLEEQLPELRKELEEAEAALeeFRQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALR 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 701 EALDKAKEKDKKITElSKEVFNLKEALKEQPAALAT---------PEVEALRDQVKDLQQQL-QEAARDHSSVVALYRSh 770
Cdd:COG3206 247 AQLGSGPDALPELLQ-SPVIQQLRAQLAELEAELAElsarytpnhPDVIALRAQIAALRAQLqQEAQRILASLEAELEA- 324
|
170 180
....*....|....*....|....*....
gi 768001184 771 lLYAIQGQMDEDVQRILSQILQMQRLQAQ 799
Cdd:COG3206 325 -LQAREASLQAQLAQLEARLAELPELEAE 352
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
548-759 |
3.63e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 3.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 548 EEARQGLAELREASEALRQSVvpasehRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERERVcsvALSEHERIVG 627
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKEL------AALKKEEKALLKQLAALERRIAALARRIRALEQELAALEA---ELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 628 TLQANVAQLEGQLEELGRRHEKT-----------SAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQ 696
Cdd:COG4942 94 ELRAELEAQKEELAELLRALYRLgrqpplalllsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAER 173
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 768001184 697 SRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATpEVEALRDQVKDLQQQLQEAARD 759
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQKLLARLEKELAELAA-ELAELQQEAEELEALIARLEAE 235
|
|
| CusB_dom_1 |
pfam00529 |
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli ... |
438-581 |
3.75e-04 |
|
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli can be divided into four different domains, the first three domains of the protein are mostly beta-strands and the fourth forms an all alpha-helical domain. This entry represents the first beta-domain (domain 1) of CusB and it is formed by the N and C-terminal ends of the polypeptide (residues 89-102 and 324-385). CusB is part of the copper-transporting efflux system CusCFBA. This domain can also be found in other membrane-fusion proteins, such as HlyD, MdtN, MdtE and AaeA. HlyD is a component of the prototypical alpha-haemolysin (HlyA) bacterial type I secretion system, along with the other components HlyB and TolC. HlyD is anchored in the cytoplasmic membrane by a single transmembrane domain and has a large periplasmic domain within the carboxy-terminal 100 amino acids, HlyB and HlyD form a stable complex that binds the recombinant protein bearing a C-terminal HlyA signal sequence and ATP in the cytoplasm. HlyD, HlyB and TolC combine to form the three-component ABC transporter complex that forms a trans-membrane channel or pore through which HlyA can be transferred directly to the extracellular medium. Cutinase has been shown to be transported effectively through this pore.
Pssm-ID: 425733 [Multi-domain] Cd Length: 322 Bit Score: 43.57 E-value: 3.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 438 DTTQLRAALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARA 517
Cdd:pfam00529 52 DPTDYQAALDSAEAQLAKAQAQVARLQAELDRLQALESELAISRQDYDGATAQLRAAQAAVKAAQAQLAQAQIDLARRRV 131
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 768001184 518 TGEQ---QRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVVPASEHRRLQEEA 581
Cdd:pfam00529 132 LAPIggiSRESLVTAGALVAQAQANLLATVAQLDQIYVQITQSAAENQAEVRSELSGAQLQIAEAEA 198
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
450-568 |
4.73e-04 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 43.03 E-value: 4.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 450 REDLRDRDSRLRELEAASACLDEARAsrlLAEEEARGLRAELAQreearleqsrelevLREQLATARATGEQQRTAAAEL 529
Cdd:PRK09039 45 SREISGKDSALDRLNSQIAELADLLS---LERQGNQDLQDSVAN--------------LRASLSAAEAERSRLQALLAEL 107
|
90 100 110
....*....|....*....|....*....|....*....
gi 768001184 530 GRARDAAEARVAELPAACEEARQGLAELREASEALRQSV 568
Cdd:PRK09039 108 AGAGAAAEGRAGELAQELDSEKQVSARALAQVELLNQQI 146
|
|
| hsdR |
PRK11448 |
type I restriction enzyme EcoKI subunit R; Provisional |
630-727 |
4.83e-04 |
|
type I restriction enzyme EcoKI subunit R; Provisional
Pssm-ID: 236912 [Multi-domain] Cd Length: 1123 Bit Score: 43.79 E-value: 4.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 630 QANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAErarQAQSRAQEALDKAKEK 709
Cdd:PRK11448 141 ENLLHALQQEVLTLKQQLELQAREKAQSQALAEAQQQELVALEGLAAELEEKQQELEAQLE---QLQEKAAETSQERKQK 217
|
90
....*....|....*...
gi 768001184 710 DKKITELSKEVFNLKEAL 727
Cdd:PRK11448 218 RKEITDQAAKRLELSEEE 235
|
|
| COG3903 |
COG3903 |
Predicted ATPase [General function prediction only]; |
391-703 |
5.87e-04 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443109 [Multi-domain] Cd Length: 933 Bit Score: 43.47 E-value: 5.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 391 LRQREREAAAEleaalgkCEAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAREDLRDRDSRLRELEAASACL 470
Cdd:COG3903 557 LRGLLREGRRW-------LERALAAAGEAAAALAAAAALAAAAAAARAAAAAAAAAAAAAAAAAAAAAAAAAALLLLAAL 629
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 471 DEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEA 550
Cdd:COG3903 630 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAAAAAAAAALAAAAAALAAAAAAAALAAAAAA 709
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 551 RQGLAELREASEALRQSVVPASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERERVCSVALSEHERIVGTLQ 630
Cdd:COG3903 710 ALAAAAAAAAAAAAAAALLAAAAAAALAAAAAAAALALAAAAAAAAAAAAAAALAAAAAAAALAALLLALAAAAAALAAA 789
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 768001184 631 ANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEAL 703
Cdd:COG3903 790 AAAAAAAAAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAALAAALAAAAAAAAAAAAAAAAAAALAAALAAAA 862
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
389-645 |
5.89e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 43.51 E-value: 5.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 389 EALRQREREAAAELEAALGKCEAAEAEAGRLR-ERVREAEGSGASGGGGGDTTQLRAALEQAREDLRDRDSRL-RELEAA 466
Cdd:TIGR02168 242 EELQEELKEAEEELEELTAELQELEEKLEELRlEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLeRQLEEL 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 467 SACLDEARASRLLAEEEARGLRAELAQ------REEARLEQSR-ELEVLREQLATARATGEQQRTAAAELGRARDAAEAR 539
Cdd:TIGR02168 322 EAQLEELESKLDELAEELAELEEKLEElkeeleSLEAELEELEaELEELESRLEELEEQLETLRSKVAQLELQIASLNNE 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 540 VAELPAACEEARQGLAELREASEALRQSVVPAsEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERERVCSVAL 619
Cdd:TIGR02168 402 IERLEARLERLEDRRERLQQEIEELLKKLEEA-ELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAA 480
|
250 260
....*....|....*....|....*.
gi 768001184 620 SEHERIVGTLQANVAQLEGQLEELGR 645
Cdd:TIGR02168 481 ERELAQLQARLDSLERLQENLEGFSE 506
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
18-691 |
6.28e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 43.67 E-value: 6.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 18 LERQVQELQQLLVERQEEKESLGRE--------VESLQSRLSLLENERENTSYDVTTLQDEEGELPDLPGAEVLLSRQLS 89
Cdd:pfam12128 270 DETLIASRQEERQETSAELNQLLRTlddqwkekRDELNGELSAADAAVAKDRSELEALEDQHGAFLDADIETAAADQEQL 349
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 90 PSAQEHLASLQEQVAVLTRQNQELMEKVQILENFEKDETQMEVEALaeviplalYDSLRAEFDQLRRQHAEALQALRQQE 169
Cdd:pfam12128 350 PSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGI--------KDKLAKIREARDRQLAVAEDDLQALE 421
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 170 TREVPREEGAACGESEVAGATATKNGPTHMELNGSVA-PETKVNGAETIDEEAAGDETMEARTMEAEATGAEATGAEATG 248
Cdd:pfam12128 422 SELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATAtPELLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRR 501
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 249 AKVTEtKPTGAEVREMETTEEEANMETKPTGAQATDTETTGVEAMGVEATKTKAEEAEMqaygVGAGQAEPPVTGttnme 328
Cdd:pfam12128 502 DQASE-ALRQASRRLEERQSALDELELQLFPQAGTLLHFLRKEAPDWEQSIGKVISPEL----LHRTDLDPEVWD----- 571
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 329 atgsratgmestgvsatgvENPGVEATVPGISagpiLHPGAAEASEKLQveletrirgLEEALRQREREAAAELEAALGK 408
Cdd:pfam12128 572 -------------------GSVGGELNLYGVK----LDLKRIDVPEWAA---------SEEELRERLDKAEEALQSAREK 619
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 409 CEAAEAEAGRLRERVREAEGSGasgggggdtTQLRAALEQAREDLRDRDSRLRELEAAsacLDEARASRL-LAEEEARGL 487
Cdd:pfam12128 620 QAAAEEQLVQANGELEKASREE---------TFARTALKNARLDLRRLFDEKQSEKDK---KNKALAERKdSANERLNSL 687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 488 RAELAQREearLEQSRELEVLREQLATARATGEQQRTAAAElgrARDAAEARVAELPAAceearqglaelREASEALRQS 567
Cdd:pfam12128 688 EAQLKQLD---KKHQAWLEEQKEQKREARTEKQAYWQVVEG---ALDAQLALLKAAIAA-----------RRSGAKAELK 750
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 568 VVPASEHRRLQEEALElrgraaslEQEVVATGKEAARLRAELERERVCSVALSEHERIVGT--------LQANVAQLEGQ 639
Cdd:pfam12128 751 ALETWYKRDLASLGVD--------PDVIAKLKREIRTLERKIERIAVRRQEVLRYFDWYQEtwlqrrprLATQLSNIERA 822
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|..
gi 768001184 640 LEELGRRHEKTSAEVfQVQREALFMksERHAAEAQLATAEQQLRGLRTEAER 691
Cdd:pfam12128 823 ISELQQQLARLIADT-KLRRAKLEM--ERKASEKQQVRLSENLRGLRCEMSK 871
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
456-788 |
6.89e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 43.29 E-value: 6.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 456 RDSRLRELEAASACLdEARASRLLAEEEARGLRAelaqREEARLEQSReLEVLREQLATARATGE---QQRTAAAELGRA 532
Cdd:pfam12128 403 REARDRQLAVAEDDL-QALESELREQLEAGKLEF----NEEEYRLKSR-LGELKLRLNQATATPElllQLENFDERIERA 476
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 533 RDAAEARVAELPAACEEARQGLAELREASEALRQsvvpasEHRRLQeealELRGRAASLEQEVVA---TGKEAARLRAEL 609
Cdd:pfam12128 477 REEQEAANAEVERLQSELRQARKRRDQASEALRQ------ASRRLE----ERQSALDELELQLFPqagTLLHFLRKEAPD 546
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 610 ERERVCSVALSE-------HERIVGTLQANVAQLEGQLEELGR-RHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQ 681
Cdd:pfam12128 547 WEQSIGKVISPEllhrtdlDPEVWDGSVGGELNLYGVKLDLKRiDVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQ 626
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 682 LRGLRTEAERARQAQSRAQEALDKAKEkdkKITELSKEVFNLKEALKEQPAALATPEVEALRD----------QVKDLQQ 751
Cdd:pfam12128 627 LVQANGELEKASREETFARTALKNARL---DLRRLFDEKQSEKDKKNKALAERKDSANERLNSleaqlkqldkKHQAWLE 703
|
330 340 350
....*....|....*....|....*....|....*..
gi 768001184 752 QLQEAARDHSSVVALYRSHLLYAIQGQMDEDVQRILS 788
Cdd:pfam12128 704 EQKEQKREARTEKQAYWQVVEGALDAQLALLKAAIAA 740
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
441-762 |
8.07e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 43.02 E-value: 8.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 441 QLRAALEQAREDLRDRDSRLRELeaaSACLDEARASRLLAEEEARGLRAELAQREEArLEQSRELEVLREQLATARATGE 520
Cdd:COG3096 289 ELRRELFGARRQLAEEQYRLVEM---ARELEELSARESDLEQDYQAASDHLNLVQTA-LRQQEKIERYQEDLEELTERLE 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 521 QQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEAL-------RQSVVPASEHRRLQEEALELRGRAASLEQ 593
Cdd:COG3096 365 EQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQqtraiqyQQAVQALEKARALCGLPDLTPENAEDYLA 444
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 594 EVVATGKEAARLRAELE-RERVCSVALSEHERIVGTLQANVAQLEgqleelgrrhektSAEVFQVQREALFMKSERHAAE 672
Cdd:COG3096 445 AFRAKEQQATEEVLELEqKLSVADAARRQFEKAYELVCKIAGEVE-------------RSQAWQTARELLRRYRSQQALA 511
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 673 AQLATAEQQLRglrtEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATpEVEALRDQVKDLQQQ 752
Cdd:COG3096 512 QRLQQLRAQLA----ELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEE-QAAEAVEQRSELRQQ 586
|
330
....*....|
gi 768001184 753 LQEAARDHSS 762
Cdd:COG3096 587 LEQLRARIKE 596
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
444-760 |
1.31e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.06 E-value: 1.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 444 AALEQAREDLRDRDSRLRELEAASACLDEARAsRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQR 523
Cdd:COG4717 88 EEYAELQEELEELEEELEELEAELEELREELE-KLEKLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELE 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 524 TAAAELGRAR-------------------------DAAEARVAELPAACEEARQGLAELREASEALRQSVVPASEHRRLQ 578
Cdd:COG4717 167 ELEAELAELQeeleelleqlslateeelqdlaeelEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLK 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 579 EEALELRGRAASLEQEVVATGKEAARLR--------------AELERERVCSVALSEHERIVGTLQANVAQLEGQLEELG 644
Cdd:COG4717 247 EARLLLLIAAALLALLGLGGSLLSLILTiagvlflvlgllalLFLLLAREKASLGKEAEELQALPALEELEEEELEELLA 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 645 RRHEKTSAEVFQVqREALFMKSERHAAEAQLATAEQQLRGLRTEAERAR---QAQSRAQEALDKAKEKDKKITELSKEVF 721
Cdd:COG4717 327 ALGLPPDLSPEEL-LELLDRIEELQELLREAEELEEELQLEELEQEIAAllaEAGVEDEEELRAALEQAEEYQELKEELE 405
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 768001184 722 NLKEALKEQP----AALATPEVEALRDQVKDLQQQLQEAARDH 760
Cdd:COG4717 406 ELEEQLEELLgeleELLEALDEEELEEELEELEEELEELEEEL 448
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
440-755 |
1.83e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 42.03 E-value: 1.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 440 TQLRAALEQAREDLRDRDSRL-RELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARAT 518
Cdd:pfam15921 327 SQLRSELREAKRMYEDKIEELeKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDR 406
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 519 GEQQRTAAAELGRARDAAEARVAELPAACEEARqglaelreaSEALRQsvvpasehrrLQEEALELRGRAASLEQEVVAT 598
Cdd:pfam15921 407 DTGNSITIDHLRRELDDRNMEVQRLEALLKAMK---------SECQGQ----------MERQMAAIQGKNESLEKVSSLT 467
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 599 gkeaARLRAELERERVCSVALSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVqrealfmkseRHAAEAQLata 678
Cdd:pfam15921 468 ----AQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKL----------RSRVDLKL--- 530
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 768001184 679 eQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEA--LRDQVKDLQQQLQE 755
Cdd:pfam15921 531 -QELQHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKaqLEKEINDRRLELQE 608
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
18-173 |
2.35e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 2.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 18 LERQVQELQQLLVERQEEKESLGREVESLQSRLSLLENERENTSYDVTTLQDEEGELPDLPGAEVLLSRQLSPSAQEHLA 97
Cdd:COG4913 690 LEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRE 769
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 98 SLQEQVAVLTRQNQELMEK-VQILENF------EKDETQMEVEALAEVipLALYDSLRAefDQLRRQHAEALQALRQQET 170
Cdd:COG4913 770 NLEERIDALRARLNRAEEElERAMRAFnrewpaETADLDADLESLPEY--LALLDRLEE--DGLPEYEERFKELLNENSI 845
|
...
gi 768001184 171 REV 173
Cdd:COG4913 846 EFV 848
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
440-729 |
2.35e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 41.58 E-value: 2.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 440 TQLRAALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARG---------------------LRAELAQREEAR 498
Cdd:PRK10929 140 SQLPQQQTEARRQLNEIERRLQTLGTPNTPLAQAQLTALQAESAALKalvdelelaqlsannrqelarLRSELAKKRSQQ 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 499 LEQsrELEVLREQLATARatgeqQRTAAAELGRARDAAEaRVAELPAACEEArqgLAELREASEALRQSV----VPASEH 574
Cdd:PRK10929 220 LDA--YLQALRNQLNSQR-----QREAERALESTELLAE-QSGDLPKSIVAQ---FKINRELSQALNQQAqrmdLIASQQ 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 575 RRLQEEALELRgraasleqEVVATGKEAARLRAElerervcSVALSEherivgTLQANVA---------QLEGQLEELgr 645
Cdd:PRK10929 289 RQAASQTLQVR--------QALNTLREQSQWLGV-------SNALGE------ALRAQVArlpempkpqQLDTEMAQL-- 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 646 rhektsaevfQVQR---EALFmksERHAAEAQLATAEQQlrGLRTEAERARQAQSRAQEALDKA--KEKDKKITELSK-E 719
Cdd:PRK10929 346 ----------RVQRlryEDLL---NKQPQLRQIRQADGQ--PLTAEQNRILDAQLRTQRELLNSllSGGDTLILELTKlK 410
|
330
....*....|..
gi 768001184 720 VFN--LKEALKE 729
Cdd:PRK10929 411 VANsqLEDALKE 422
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
371-608 |
2.37e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 41.59 E-value: 2.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 371 EASEKLQVELETRIRGLEEALRQREREAAAELEAALGKCEAAEAEAGRLRERV--REAEGSGASGGGGGDTTQLRAALEQ 448
Cdd:TIGR02169 268 EEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAeeRLAKLEAEIDKLLAEIEELEREIEE 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 449 ARedlRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAE 528
Cdd:TIGR02169 348 ER---KRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELAD 424
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 529 LGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVVPAS-EHRRLQEEALELRGRAASLEQEVVATGKEAARLRA 607
Cdd:TIGR02169 425 LNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEqELYDLKEEYDRVEKELSKLQRELAEAEAQARASEE 504
|
.
gi 768001184 608 E 608
Cdd:TIGR02169 505 R 505
|
|
| Surf_Exclu_PgrA |
TIGR04320 |
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface ... |
669-756 |
3.77e-03 |
|
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface proteins of a number of Firmutes. Many members have LPXTG C-terminal anchoring motifs and a substantial number have the KxYKxGKxW putative sorting signal at the N-terminus. The tetracycline resistance plasmid pCF10 in Enterococcus faecalis promotes conjugal plasmid transfer in response to sex pheromones, but PgrA/Sec10 encoded by that plasmid, a member of this family, specifically inhibits the ability of cells to receive homologous plasmids. The phenomenon is called surface exclusion.
Pssm-ID: 275124 [Multi-domain] Cd Length: 356 Bit Score: 40.48 E-value: 3.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 669 HAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKekdKKITELSKEVfnlkEALKEQPAALATPEVEALRDQVKD 748
Cdd:TIGR04320 257 AALQAKLATAQADLAAAQTALNTAQAALTSAQTAYAAAQ---AALATAQKEL----ANAQAQALQTAQNNLATAQAALAN 329
|
....*...
gi 768001184 749 LQQQLQEA 756
Cdd:TIGR04320 330 AEARLAKA 337
|
|
| RecN |
COG0497 |
DNA repair ATPase RecN [Replication, recombination and repair]; |
444-720 |
5.63e-03 |
|
DNA repair ATPase RecN [Replication, recombination and repair];
Pssm-ID: 440263 [Multi-domain] Cd Length: 555 Bit Score: 40.06 E-value: 5.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 444 AALEQAREDLRDRDSRLRELEAAsacLDEARASRLLAEEEARGLRAELAQREEARLEQS--RELEVLREQLATARATGEQ 521
Cdd:COG0497 151 AGLEELLEEYREAYRAWRALKKE---LEELRADEAERARELDLLRFQLEELEAAALQPGeeEELEEERRRLSNAEKLREA 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 522 QRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVVpasehrRLQEEALELRGRAASLEQevvatgkE 601
Cdd:COG0497 228 LQEALEALSGGEGGALDLLGQALRALERLAEYDPSLAELAERLESALI------ELEEAASELRRYLDSLEF-------D 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 602 AARLrAELErervcsvalsehERIvgtlqanvaqleGQLEELGRRHEKTSAEVFQVQREAlfmkserhAAE-AQLATAEQ 680
Cdd:COG0497 295 PERL-EEVE------------ERL------------ALLRRLARKYGVTVEELLAYAEEL--------RAElAELENSDE 341
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 768001184 681 QLRGLRTEAERARQAQSRAQEALDKAKEkdKKITELSKEV 720
Cdd:COG0497 342 RLEELEAELAEAEAELLEAAEKLSAARK--KAAKKLEKAV 379
|
|
| hsdR |
PRK11448 |
type I restriction enzyme EcoKI subunit R; Provisional |
570-683 |
5.77e-03 |
|
type I restriction enzyme EcoKI subunit R; Provisional
Pssm-ID: 236912 [Multi-domain] Cd Length: 1123 Bit Score: 40.32 E-value: 5.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 570 PASEHRRLQEEALELRgraasleQEVVATGKEAARLRAELERERVCSVALsehERIVGTLQANVAQLEGQLEELGRRHEK 649
Cdd:PRK11448 140 PENLLHALQQEVLTLK-------QQLELQAREKAQSQALAEAQQQELVAL---EGLAAELEEKQQELEAQLEQLQEKAAE 209
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 768001184 650 TSAEVFQVQREAlfmkSERHAAEAQLATAE------QQLR 683
Cdd:PRK11448 210 TSQERKQKRKEI----TDQAAKRLELSEEEtrilidQQLR 245
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
371-566 |
5.99e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 40.00 E-value: 5.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 371 EASEKLQVELETRIRGLEEALRQrereaaaeleaalgkceaAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAR 450
Cdd:COG3206 171 EEARKALEFLEEQLPELRKELEE------------------AEAALEEFRQKNGLVDLSEEAKLLLQQLSELESQLAEAR 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 451 EDLRDRDSRLRELEAASAcLDEARASRLLAEEEARGLRAELAQREEARLEQSR-------ELEVLREQLATARATGEQQ- 522
Cdd:COG3206 233 AELAEAEARLAALRAQLG-SGPDALPELLQSPVIQQLRAQLAELEAELAELSArytpnhpDVIALRAQIAALRAQLQQEa 311
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 768001184 523 RTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQ 566
Cdd:COG3206 312 QRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRR 355
|
|
| COG3903 |
COG3903 |
Predicted ATPase [General function prediction only]; |
412-703 |
6.20e-03 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443109 [Multi-domain] Cd Length: 933 Bit Score: 40.00 E-value: 6.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 412 AEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAREDLRDRDSRLRELEAASACLDEARA------SRLLAEEEAR 485
Cdd:COG3903 487 RAAARRRHADYYLALAERAAAELRGPDQLAWLARLDAEHDNLRAALRWALAHGDAELALRLAAAlapfwfLRGLLREGRR 566
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 486 GLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALR 565
Cdd:COG3903 567 WLERALAAAGEAAAALAAAAALAAAAAAARAAAAAAAAAAAAAAAAAAAAAAAAAALLLLAALAAAAAAAAAAAAAAAAA 646
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 566 QSVVPASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERERVCSVALSEHERIVGTLQANVAQLEGQLEELGR 645
Cdd:COG3903 647 AAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAAAAAAAAALAAAAAALAAAAAAAALAAAAAAALAAAAAAAAAAAAAAA 726
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 768001184 646 RHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEAL 703
Cdd:COG3903 727 LLAAAAAAALAAAAAAAALALAAAAAAAAAAAAAAALAAAAAAAALAALLLALAAAAA 784
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
413-661 |
7.01e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 39.94 E-value: 7.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 413 EAEAGRLRERVREAEGSGASGGGGgdTTQLRAALEQAREDLrdrdSRLRELEAASACLDEARAsrllaEEEARGLRAELA 492
Cdd:COG3096 835 EAELAALRQRRSELERELAQHRAQ--EQQLRQQLDQLKEQL----QLLNKLLPQANLLADETL-----ADRLEELREELD 903
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 493 QREEARL---EQSRELEVLREQLATARATGEQQRTAAAELGRA---RDAAEAR-------VAELPA-ACEEARQGLAELR 558
Cdd:COG3096 904 AAQEAQAfiqQHGKALAQLEPLVAVLQSDPEQFEQLQADYLQAkeqQRRLKQQifalsevVQRRPHfSYEDAVGLLGENS 983
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 559 EASEALRQSVVPASEHRRLQEEALE---------------LRGRA-------ASLEQEVVATGKEA---ARLRAELERER 613
Cdd:COG3096 984 DLNEKLRARLEQAEEARREAREQLRqaqaqysqynqvlasLKSSRdakqqtlQELEQELEELGVQAdaeAEERARIRRDE 1063
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 768001184 614 VCSvALSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREA 661
Cdd:COG3096 1064 LHE-ELSQNRSRRSQLEKQLTRCEAEMDSLQKRLRKAERDYKQEREQV 1110
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
15-179 |
7.72e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 39.90 E-value: 7.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 15 LHILERQVQELQQLLVERQEEKESLGREVESLQSRLSLLEN--ERENTSYDVTTLQDEEGELpdlpgaEVLLSRQLSPS- 91
Cdd:COG4913 612 LAALEAELAELEEELAEAEERLEALEAELDALQERREALQRlaEYSWDEIDVASAEREIAEL------EAELERLDASSd 685
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 92 ----AQEHLASLQEQVAVLTRQNQELMEKVQILEN------FEKDETQMEVEALAEVIPLALYDSLRAEFDQL-----RR 156
Cdd:COG4913 686 dlaaLEEQLEELEAELEELEEELDELKGEIGRLEKeleqaeEELDELQDRLEAAEDLARLELRALLEERFAAAlgdavER 765
|
170 180
....*....|....*....|...
gi 768001184 157 QHAEALQALRQQETREVPREEGA 179
Cdd:COG4913 766 ELRENLEERIDALRARLNRAEEE 788
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
442-755 |
7.89e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 39.66 E-value: 7.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 442 LRAALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQlataratgeq 521
Cdd:PRK03918 212 ISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEK---------- 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 522 qrtaAAELGRARDAAEARVaELPAACEEARQGLAELREASEALRQSvvpASEHRRLQEEALELRGRAASLEQEVVATGKE 601
Cdd:PRK03918 282 ----VKELKELKEKAEEYI-KLSEFYEEYLDELREIEKRLSRLEEE---INGIEERIKELEEKEERLEELKKKLKELEKR 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 602 AARLRA---ELERERVCSVALSEHERIVGTLqaNVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERhaaeAQLATA 678
Cdd:PRK03918 354 LEELEErheLYEEAKAKKEELERLKKRLTGL--TPEKLEKELEELEKAKEEIEEEISKITARIGELKKEI----KELKKA 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 679 EQQLRGLR----------TEAERARQAQSRAQEALDKAKEK---DKKITELSKEVFNLKEALKEQPAALAtpeVEALRDQ 745
Cdd:PRK03918 428 IEELKKAKgkcpvcgrelTEEHRKELLEEYTAELKRIEKELkeiEEKERKLRKELRELEKVLKKESELIK---LKELAEQ 504
|
330
....*....|
gi 768001184 746 VKDLQQQLQE 755
Cdd:PRK03918 505 LKELEEKLKK 514
|
|
| PRK12472 |
PRK12472 |
hypothetical protein; Provisional |
461-563 |
7.90e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 237110 [Multi-domain] Cd Length: 508 Bit Score: 39.47 E-value: 7.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 461 RELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATA-------RATGEQQRT------AAA 527
Cdd:PRK12472 197 REAEDAARAADEAKTAAAAAAREAAPLKASLRKLERAKARADAELKRADKALAAAktdeakaRAEERQQKAaqqaaeAAT 276
|
90 100 110
....*....|....*....|....*....|....*.
gi 768001184 528 ELGRARDAAEARVAELPAACEEARQGLAELREASEA 563
Cdd:PRK12472 277 QLDTAKADAEAKRAAAAATKEAAKAAAAKKAETAKA 312
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
471-755 |
8.95e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 39.94 E-value: 8.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 471 DEARASRLLA-EEEARGLRAELAQREEARLEQSRELEVLREQLAT--ARATGEQQRTAAAELGRARDAAEARVAELPAAC 547
Cdd:PRK04863 781 RAAREKRIEQlRAEREELAERYATLSFDVQKLQRLHQAFSRFIGShlAVAFEADPEAELRQLNRRRVELERALADHESQE 860
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 548 EEARQGLAELREASEALR----QSVVPASEHrrLQEEALELRGRAASLEqevvatgkEAARLRAELERervcsvALSEHE 623
Cdd:PRK04863 861 QQQRSQLEQAKEGLSALNrllpRLNLLADET--LADRVEEIREQLDEAE--------EAKRFVQQHGN------ALAQLE 924
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 624 RIVGTLQA---NVAQLEGQLEELGRRHEKTSAEVFQ----VQREALFMKSErhaaEAQLATAEQQLR-GLRTEAERARQA 695
Cdd:PRK04863 925 PIVSVLQSdpeQFEQLKQDYQQAQQTQRDAKQQAFAltevVQRRAHFSYED----AAEMLAKNSDLNeKLRQRLEQAEQE 1000
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 696 QSRAQEALdkaKEKDKKITELSKEVFNLKEALkeqpaalatpevEALRDQVKDLQQQLQE 755
Cdd:PRK04863 1001 RTRAREQL---RQAQAQLAQYNQVLASLKSSY------------DAKRQMLQELKQELQD 1045
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
619-757 |
9.72e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 38.37 E-value: 9.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 619 LSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTE---------- 688
Cdd:COG1579 19 LDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNkeyealqkei 98
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 768001184 689 ---AERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATpEVEALRDQVKDLQQQLQEAA 757
Cdd:COG1579 99 eslKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDE-ELAELEAELEELEAEREELA 169
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
496-755 |
9.76e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 39.55 E-value: 9.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 496 EARLEQ-SRELEVLREQLATARA-TGEQQRTAA----------------------AELGRARDAAEARVAELPAACEEAR 551
Cdd:COG3096 784 EKRLEElRAERDELAEQYAKASFdVQKLQRLHQafsqfvgghlavafapdpeaelAALRQRRSELERELAQHRAQEQQLR 863
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 552 QGLAELREASEALRQsVVPASEHrrLQEEALELRGRAAsleQEVVATGKEAARLRAElerervCSVALSEHERIVGTLQ- 630
Cdd:COG3096 864 QQLDQLKEQLQLLNK-LLPQANL--LADETLADRLEEL---REELDAAQEAQAFIQQ------HGKALAQLEPLVAVLQs 931
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768001184 631 --ANVAQLEGQLEELGRRHEKTSAEVFQ----VQREALFMKSErhaAEAQLATAEQQLRGLRTEAERARQAQSRAQEALd 704
Cdd:COG3096 932 dpEQFEQLQADYLQAKEQQRRLKQQIFAlsevVQRRPHFSYED---AVGLLGENSDLNEKLRARLEQAEEARREAREQL- 1007
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 768001184 705 kaKEKDKKITELSKEVFNLKEALkeqpaalatpevEALRDQVKDLQQQLQE 755
Cdd:COG3096 1008 --RQAQAQYSQYNQVLASLKSSR------------DAKQQTLQELEQELEE 1044
|
|
| |
