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Conserved domains on  [gi|768020468|ref|XP_011527809|]
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GDP-fucose protein O-fucosyltransferase 2 isoform X7 [Homo sapiens]

Protein Classification

GDP-fucose protein O-fucosyltransferase 2( domain architecture ID 10181941)

GDP-fucose protein O-fucosyltransferase 2 (POFUT2) catalyzes the reaction that attaches fucose through an O-glycosidic linkage to a conserved serine or threonine residue in the consensus sequence C1-X-X-S/T-C2 of thrombospondin type I repeats (TSRs) where C1 and C2 are the first and second cysteines of the repeat, respectively

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
O-FucT-2 cd11298
GDP-fucose protein O-fucosyltransferase 2; O-FucT-2 adds O-fucose to thrombospondin type 1 ...
45-424 0e+00

GDP-fucose protein O-fucosyltransferase 2; O-FucT-2 adds O-fucose to thrombospondin type 1 repeats (TSRs), and appears conserved in bilateria. The O-fucosylation of TSRs appears to play a role in regulating secretion of metalloproteases of the ADAMTS superfamily. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes.


:

Pssm-ID: 211384  Cd Length: 374  Bit Score: 594.25  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468  45 YLLYDVNPPEGFNLRRDVYIRIASLLKTLLK---TEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVIE 121
Cdd:cd11298    1 YLLYDVNPGEGFNLRRDVYIRVANLVKSLNKrgkEQDWVLVLPPWGRLYHWKSRDIKQSRLPWSLFFDLESLNRYIPVIE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468 122 YEQFIagrrtacgvcfvvsqcsardKESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYY------ 195
Cdd:cd11298   81 YEEFL--------------------KETGPVSIDILYYLQHYAEGWEKGKWEDKLEERSCIIEPVYSKDCDGKYrgwfwg 140
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468 196 ----RCLLRLLPLPQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTRRSMVFARHLREVGDEFRSRHLNST 271
Cdd:cd11298  141 ycevTARKFSCLSFQGSASYLAPSLLENKFLRSIMIDRAEVLLHDHYGILDYWNARRSMRFAKHLRDIANEFRKEYLNST 220
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468 272 DDADRIPFQEDWmKMKVKLGSALGGPYLGVHLRRKDFIWGHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEE 351
Cdd:cd11298  221 DESDKTVRPEWW-RMKKKKGSALGGPYLAVHLRRGDFVYGRKKDVPSLKGAAKQILNLMKKLKLKKVFIATDAKKEELEE 299
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 768020468 352 LKKLL--PEMVRFEPTWEELELYKDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGLDPKTTYNRFCGD 424
Cdd:cd11298  300 LKKLLkkLKVVRYEPTLEELEKLKDGGVAIIDQWICAHARYFIGTKESTFSFRIQEEREILGFPPDTTFNRLCGD 374
 
Name Accession Description Interval E-value
O-FucT-2 cd11298
GDP-fucose protein O-fucosyltransferase 2; O-FucT-2 adds O-fucose to thrombospondin type 1 ...
45-424 0e+00

GDP-fucose protein O-fucosyltransferase 2; O-FucT-2 adds O-fucose to thrombospondin type 1 repeats (TSRs), and appears conserved in bilateria. The O-fucosylation of TSRs appears to play a role in regulating secretion of metalloproteases of the ADAMTS superfamily. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes.


Pssm-ID: 211384  Cd Length: 374  Bit Score: 594.25  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468  45 YLLYDVNPPEGFNLRRDVYIRIASLLKTLLK---TEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVIE 121
Cdd:cd11298    1 YLLYDVNPGEGFNLRRDVYIRVANLVKSLNKrgkEQDWVLVLPPWGRLYHWKSRDIKQSRLPWSLFFDLESLNRYIPVIE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468 122 YEQFIagrrtacgvcfvvsqcsardKESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYY------ 195
Cdd:cd11298   81 YEEFL--------------------KETGPVSIDILYYLQHYAEGWEKGKWEDKLEERSCIIEPVYSKDCDGKYrgwfwg 140
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468 196 ----RCLLRLLPLPQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTRRSMVFARHLREVGDEFRSRHLNST 271
Cdd:cd11298  141 ycevTARKFSCLSFQGSASYLAPSLLENKFLRSIMIDRAEVLLHDHYGILDYWNARRSMRFAKHLRDIANEFRKEYLNST 220
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468 272 DDADRIPFQEDWmKMKVKLGSALGGPYLGVHLRRKDFIWGHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEE 351
Cdd:cd11298  221 DESDKTVRPEWW-RMKKKKGSALGGPYLAVHLRRGDFVYGRKKDVPSLKGAAKQILNLMKKLKLKKVFIATDAKKEELEE 299
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 768020468 352 LKKLL--PEMVRFEPTWEELELYKDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGLDPKTTYNRFCGD 424
Cdd:cd11298  300 LKKLLkkLKVVRYEPTLEELEKLKDGGVAIIDQWICAHARYFIGTKESTFSFRIQEEREILGFPPDTTFNRLCGD 374
O-FucT pfam10250
GDP-fucose protein O-fucosyltransferase; This is a family of conserved proteins representing ...
45-410 1.36e-43

GDP-fucose protein O-fucosyltransferase; This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats. Six highly conserved cysteines are present in O-FucT-1 as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and C. elegans. Both features are characteriztic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese.


Pssm-ID: 463023 [Multi-domain]  Cd Length: 247  Bit Score: 153.22  E-value: 1.36e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468   45 YLLYDvnPPEG-FNLRRDVYIRIASLLKTLLKTeewvLVLPPWGRLYHWQSPDIhqVRIPWSEFFDLpslnknipvieye 123
Cdd:pfam10250   1 YLLYC--PCNGgFNQQRDHICDAVAFARLLNAT----LVLPPWDQLYHWRDPST--DQIPFSDIFDE------------- 59
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468  124 qfiagrrtacgvcFVVSQCSARDKESGGpfidqvyvlqsyaegwkegtweekvderpcidqllysqdkheyyrcllrllp 203
Cdd:pfam10250  60 -------------FIESLCRSKQGNFGP---------------------------------------------------- 74
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468  204 lpqgsasivaplllrntsarsvmldraenllhdhyggkeYWDTRRSMVFARHLREVGDEFRSRHLNstddadripfqedw 283
Cdd:pfam10250  75 ---------------------------------------FWVNFHALRFSPEIEELGDKLVDRLLK-------------- 101
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468  284 mkmkvklgsalgGPYLGVHLRR-KDFI--WGHRQD--------------------------VPSLEGAVRKIRSLMKTHR 334
Cdd:pfam10250 102 ------------GPYLALHLRReKDMLaaSGCAEGggdeeaeedpeerrrnglcpltpeecLPSLVGILLQALGFVKKLT 169
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468  335 ldKVFVATDAVRKEYE--ELKKLLPEMVRFE--PTWEELELYKDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREIL 410
Cdd:pfam10250 170 --RIYVATDEIYGGEElaPLKSMFPNLVTKEslASVEELEPFKDGSSAALDYIICLHSDVFIGTCVSNFSAFVKGERRYL 247
 
Name Accession Description Interval E-value
O-FucT-2 cd11298
GDP-fucose protein O-fucosyltransferase 2; O-FucT-2 adds O-fucose to thrombospondin type 1 ...
45-424 0e+00

GDP-fucose protein O-fucosyltransferase 2; O-FucT-2 adds O-fucose to thrombospondin type 1 repeats (TSRs), and appears conserved in bilateria. The O-fucosylation of TSRs appears to play a role in regulating secretion of metalloproteases of the ADAMTS superfamily. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes.


Pssm-ID: 211384  Cd Length: 374  Bit Score: 594.25  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468  45 YLLYDVNPPEGFNLRRDVYIRIASLLKTLLK---TEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVIE 121
Cdd:cd11298    1 YLLYDVNPGEGFNLRRDVYIRVANLVKSLNKrgkEQDWVLVLPPWGRLYHWKSRDIKQSRLPWSLFFDLESLNRYIPVIE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468 122 YEQFIagrrtacgvcfvvsqcsardKESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYY------ 195
Cdd:cd11298   81 YEEFL--------------------KETGPVSIDILYYLQHYAEGWEKGKWEDKLEERSCIIEPVYSKDCDGKYrgwfwg 140
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468 196 ----RCLLRLLPLPQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTRRSMVFARHLREVGDEFRSRHLNST 271
Cdd:cd11298  141 ycevTARKFSCLSFQGSASYLAPSLLENKFLRSIMIDRAEVLLHDHYGILDYWNARRSMRFAKHLRDIANEFRKEYLNST 220
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468 272 DDADRIPFQEDWmKMKVKLGSALGGPYLGVHLRRKDFIWGHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEE 351
Cdd:cd11298  221 DESDKTVRPEWW-RMKKKKGSALGGPYLAVHLRRGDFVYGRKKDVPSLKGAAKQILNLMKKLKLKKVFIATDAKKEELEE 299
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 768020468 352 LKKLL--PEMVRFEPTWEELELYKDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGLDPKTTYNRFCGD 424
Cdd:cd11298  300 LKKLLkkLKVVRYEPTLEELEKLKDGGVAIIDQWICAHARYFIGTKESTFSFRIQEEREILGFPPDTTFNRLCGD 374
O-FucT pfam10250
GDP-fucose protein O-fucosyltransferase; This is a family of conserved proteins representing ...
45-410 1.36e-43

GDP-fucose protein O-fucosyltransferase; This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats. Six highly conserved cysteines are present in O-FucT-1 as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and C. elegans. Both features are characteriztic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese.


Pssm-ID: 463023 [Multi-domain]  Cd Length: 247  Bit Score: 153.22  E-value: 1.36e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468   45 YLLYDvnPPEG-FNLRRDVYIRIASLLKTLLKTeewvLVLPPWGRLYHWQSPDIhqVRIPWSEFFDLpslnknipvieye 123
Cdd:pfam10250   1 YLLYC--PCNGgFNQQRDHICDAVAFARLLNAT----LVLPPWDQLYHWRDPST--DQIPFSDIFDE------------- 59
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468  124 qfiagrrtacgvcFVVSQCSARDKESGGpfidqvyvlqsyaegwkegtweekvderpcidqllysqdkheyyrcllrllp 203
Cdd:pfam10250  60 -------------FIESLCRSKQGNFGP---------------------------------------------------- 74
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468  204 lpqgsasivaplllrntsarsvmldraenllhdhyggkeYWDTRRSMVFARHLREVGDEFRSRHLNstddadripfqedw 283
Cdd:pfam10250  75 ---------------------------------------FWVNFHALRFSPEIEELGDKLVDRLLK-------------- 101
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468  284 mkmkvklgsalgGPYLGVHLRR-KDFI--WGHRQD--------------------------VPSLEGAVRKIRSLMKTHR 334
Cdd:pfam10250 102 ------------GPYLALHLRReKDMLaaSGCAEGggdeeaeedpeerrrnglcpltpeecLPSLVGILLQALGFVKKLT 169
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468  335 ldKVFVATDAVRKEYE--ELKKLLPEMVRFE--PTWEELELYKDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREIL 410
Cdd:pfam10250 170 --RIYVATDEIYGGEElaPLKSMFPNLVTKEslASVEELEPFKDGSSAALDYIICLHSDVFIGTCVSNFSAFVKGERRYL 247
O-FucT_like cd11296
GDP-fucose protein O-fucosyltransferase and related proteins; O-fucosyltransferase-like ...
243-412 2.92e-27

GDP-fucose protein O-fucosyltransferase and related proteins; O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes.


Pssm-ID: 211383  Cd Length: 206  Bit Score: 107.89  E-value: 2.92e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468 243 YWDTRRSMVFARHLREVGDEFRSrhlnstddadripfqedwmkmkvKLGSALGGPYLGVHLRRKDFIWGHRQD------- 315
Cdd:cd11296   42 IRLVGKHLRFSPEIRKLADRFVR-----------------------KLLGLPGGPYLAVHLRRGDFEVECCHLakwmgey 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468 316 ----VPSLEGAVRKIRSLMKTHRLDKVFVATDAVRKEY--EELKKLLPEMVRFEPTWEELELYKD-----GGVAIIDQWI 384
Cdd:cd11296   99 leecLLSAEEIAEKIKELMAERKLKVVYVATDEADREElrEELRKAGIRVVTKDDLLEDAELLELekldnYLLSLVDQEI 178
                        170       180
                 ....*....|....*....|....*...
gi 768020468 385 CAHARFFIGTSVSTFSFRIHEEREILGL 412
Cdd:cd11296  179 CSRADVFIGTGFSTFSSNVALLRRWRGK 206
O-FucT-1 cd11302
GDP-fucose protein O-fucosyltransferase 1; The protein O-fucosyltransferase 1 (Ofut1 or ...
80-412 1.44e-08

GDP-fucose protein O-fucosyltransferase 1; The protein O-fucosyltransferase 1 (Ofut1 or O-FucT-1) adds O-fucose to EGF (epidermal growth factor-like) repeats. The O-fucsosylation of the Notch receptor signaling protein is dependent on this enzyme, which requires GDP-fucose as a substrate. O-fucose residues added to the target of O-FucT-1 may be further elongated by other glycosyltransferases. On top of O-fucosylation, O-FucT-1 may have other functions such as the regulation of the Notch receptor exit from the ER. Six highly conserved cysteines are present in O-FucT-1, which is a soluble ER protein, as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and C. elegans. Both features are characteristic of several glycosyltransferase families. The membrane-bound pre-protein is released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese. O-FucT-1 is similar to family 1 glycosyltransferases (GT1).


Pssm-ID: 211388  Cd Length: 347  Bit Score: 56.09  E-value: 1.44e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468  80 VLVLPPWGRLYHWQSPDIHqvrIPWSEFFDLPSLNKNIPVIEYEQFI---------AGRRTacGVCFVV------SQCSA 144
Cdd:cd11302   35 TLVLPPWIEYRHGPPPSVQ---IPFDDYFKVEPLQEYHRVITMEDFMeelaptiwpPGKRK--GYCYSPraspdsKDCPM 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468 145 RDKESGGPFIDQVYVlqsyaegwkEGTWEEKVDERPCIDQLLYSQDK-HEYYRcllrllplpqgsaSIVAPLL-LRNTSA 222
Cdd:cd11302  110 KEGNPFGPFWDHFGV---------DFDGSELYGPLSYDTFYPDVREAwNERFP-------------PSEHPVLaFTGAPA 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468 223 RSVMLdRAENLLHdhyggkeywdtrRSMVFARHLREVGDEFRSRHLNstddadripfqedwmkmkvklgsalgGPYLGVH 302
Cdd:cd11302  168 SFPVL-PENRPLH------------KYLEWSDEIVKEADEFINENLP--------------------------RPFVGIH 208
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468 303 LRR-----------KDFIW------------GHRQDV------PSLEGAVRKIRSLMKTHRLDKVFVATDAVRKEyEELK 353
Cdd:cd11302  209 LRNgidwknacehvKGTSRnlmaspqclgygNERGTLtkemclPSKEEILKQVKRAVKKIKAKSVFIATDNDHMI-EELK 287
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468 354 KLLPemvrfeptWEELELYK-DGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGL 412
Cdd:cd11302  288 KALK--------SLKVKVVHlDPDEPQIDLAILGKADHFIGNCVSSFSAFVKRERDVAGL 339
NodZ_like cd11548
Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ; Bradyrhizobium NodZ is an alpha 1, ...
295-400 1.98e-05

Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ; Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes.


Pssm-ID: 211389 [Multi-domain]  Cd Length: 287  Bit Score: 46.21  E-value: 1.98e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768020468 295 GGPYLGVHLRRKDfiwGHRQDVPSLEGAVRKIRSLMKTHRLDK---VFVATDAVRKEyEELKKLLPEMV----RFEPTWE 367
Cdd:cd11548  164 GRPTIGVHIRTTD---HKDSLFIKLSPLHRVVDALRKKVALHKdatIFLATDSAEVK-DELKRLFPDVVvtpkEFPPHGE 239
                         90       100       110
                 ....*....|....*....|....*....|....*
gi 768020468 368 ELEL-YKDGGV-AIIDQWICAHARFFIGTSVSTFS 400
Cdd:cd11548  240 RSASdGLEGAEdALIDMYLLARCDHLIGSRFSTFS 274
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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