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Conserved domains on  [gi|768031584|ref|XP_011529029|]
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serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X12 [Homo sapiens]

Protein Classification

SAPS family protein( domain architecture ID 10517350)

SAPS (SIT4-associating proteins) family protein

Gene Ontology:  GO:0019888|GO:0043666
PubMed:  8649382

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SAPS pfam04499
SIT4 phosphatase-associated protein; This family includes a conserved region from a group of ...
 150-555 2.29e-158

SIT4 phosphatase-associated protein; This family includes a conserved region from a group of yeast proteins that associate with the SIT4 phosphatase. This association is required for SIT4's role in G1 cyclin transcription and for bud formation. This family also includes homologous regions from other eukaryotes.


:

Pssm-ID: 398279  Cd Length: 383  Bit Score: 470.57  E-value: 2.29e-158
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  150 IGNLIARKTEQVITFLKKKDKFISLVLKHIGTSALMDLLLRLVSCVEPaGLRQDVLHWLNEEKVIQRLVELIHPSQDEDR 229
Cdd:pfam04499   1 NENLLDRKTDQMIEFIRKQENFVDKFLKHIDTPAIMDLLLKLISTDKP-ELPTGVIEWLNEQNLIPKLLDLLSPSYDEDI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  230 QSNASQTLCDIVRLGRDQGSQLQEALEPDPLLTALESrQDCVEQLLKNMFDGdRTESCLVSGTQVLLTLLETRRVGTEGL 309
Cdd:pfam04499  80 QSNASDFLKAIITISRNAPLQLQSSIGPNELTRELVS-EESVEKLLDNMLKG-KSGSALVNGVGIIIELIRKNNSDYDPV 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  310 VDSFSQGLERSYAVSSSV-----LHGIEPRLKDFHQLLLNPPKKKAILTTIGVLEEPLGNARLHGARLMAALLHTNTPSI 384
Cdd:pfam04499 158 QLLYTTLEEHPPSDRDPIylghlLRAFSPHLPDFHQLLLDPPKDSPLQTTLGVLIEPLGFERFKIVELIAELLHCSNMSL 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  385 NQE---------LCRLNTMDLLLDLFFKYTWNNFLHFQVELCIAAILshaareerteasgsesrvepphengNRSLETPQ 455
Cdd:pfam04499 238 LNEkkgeklkikLVDLGIIPTILDLFFKYPWNNFLHNVVEDIIQQIL-------------------------NGPMDFSY 292

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  456 paaslpDNTMVTHLFQKCCLVQRILEAWEANDHTQAAGGMRRGNMGHLTRIANAVVQNLERGPVQTHISEVIRGLpadCR 535
Cdd:pfam04499 293 ------NSFLVVDLFTDCNLTQRILEGQKESDRFQAEKGPRLGYMGHLTLIAEEVVKFSEKYPPELISPDILEIL---EN 363

                         410       420
                  ....*....|....*....|
gi 768031584  536 GRWESFVEETLTETNRRNTV 555
Cdd:pfam04499 364 EEWEEYVEETLEETRERYNV 383
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 762-957 4.31e-06

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.09  E-value: 4.31e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  762 GPRCSSPVDTECSHAEGSRSQGPEKASQASYFAVSPASPCAWNVCVTRKA--PLLASDSSSSGGSHSEDGDQKAASAMDA 839
Cdd:PHA03247 2682 RPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQAspALPAAPAPPAVPAGPATPGGPARPARPP 2761

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  840 VSRGPGREAPPLPTVARTEEAVGRVGCADSRLLSPACPAPKEVTAAPAVAVPPEAtvAITTALSKAGPaIPTPAVSSALA 919
Cdd:PHA03247 2762 TTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAA--ALPPAASPAGP-LPPPTSAQPTA 2838

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 768031584  920 VAVPLGPIMAVTAAPAMVATLGTVTKDGKTDAPPEGAA 957
Cdd:PHA03247 2839 PPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPA 2876
 
Name Accession Description Interval E-value
SAPS pfam04499
SIT4 phosphatase-associated protein; This family includes a conserved region from a group of ...
 150-555 2.29e-158

SIT4 phosphatase-associated protein; This family includes a conserved region from a group of yeast proteins that associate with the SIT4 phosphatase. This association is required for SIT4's role in G1 cyclin transcription and for bud formation. This family also includes homologous regions from other eukaryotes.


Pssm-ID: 398279  Cd Length: 383  Bit Score: 470.57  E-value: 2.29e-158
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  150 IGNLIARKTEQVITFLKKKDKFISLVLKHIGTSALMDLLLRLVSCVEPaGLRQDVLHWLNEEKVIQRLVELIHPSQDEDR 229
Cdd:pfam04499   1 NENLLDRKTDQMIEFIRKQENFVDKFLKHIDTPAIMDLLLKLISTDKP-ELPTGVIEWLNEQNLIPKLLDLLSPSYDEDI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  230 QSNASQTLCDIVRLGRDQGSQLQEALEPDPLLTALESrQDCVEQLLKNMFDGdRTESCLVSGTQVLLTLLETRRVGTEGL 309
Cdd:pfam04499  80 QSNASDFLKAIITISRNAPLQLQSSIGPNELTRELVS-EESVEKLLDNMLKG-KSGSALVNGVGIIIELIRKNNSDYDPV 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  310 VDSFSQGLERSYAVSSSV-----LHGIEPRLKDFHQLLLNPPKKKAILTTIGVLEEPLGNARLHGARLMAALLHTNTPSI 384
Cdd:pfam04499 158 QLLYTTLEEHPPSDRDPIylghlLRAFSPHLPDFHQLLLDPPKDSPLQTTLGVLIEPLGFERFKIVELIAELLHCSNMSL 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  385 NQE---------LCRLNTMDLLLDLFFKYTWNNFLHFQVELCIAAILshaareerteasgsesrvepphengNRSLETPQ 455
Cdd:pfam04499 238 LNEkkgeklkikLVDLGIIPTILDLFFKYPWNNFLHNVVEDIIQQIL-------------------------NGPMDFSY 292

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  456 paaslpDNTMVTHLFQKCCLVQRILEAWEANDHTQAAGGMRRGNMGHLTRIANAVVQNLERGPVQTHISEVIRGLpadCR 535
Cdd:pfam04499 293 ------NSFLVVDLFTDCNLTQRILEGQKESDRFQAEKGPRLGYMGHLTLIAEEVVKFSEKYPPELISPDILEIL---EN 363

                         410       420
                  ....*....|....*....|
gi 768031584  536 GRWESFVEETLTETNRRNTV 555
Cdd:pfam04499 364 EEWEEYVEETLEETRERYNV 383
PHA03247 PHA03247
large tegument protein UL36; Provisional
 762-957 4.31e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.09  E-value: 4.31e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  762 GPRCSSPVDTECSHAEGSRSQGPEKASQASYFAVSPASPCAWNVCVTRKA--PLLASDSSSSGGSHSEDGDQKAASAMDA 839
Cdd:PHA03247 2682 RPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQAspALPAAPAPPAVPAGPATPGGPARPARPP 2761

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  840 VSRGPGREAPPLPTVARTEEAVGRVGCADSRLLSPACPAPKEVTAAPAVAVPPEAtvAITTALSKAGPaIPTPAVSSALA 919
Cdd:PHA03247 2762 TTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAA--ALPPAASPAGP-LPPPTSAQPTA 2838

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 768031584  920 VAVPLGPIMAVTAAPAMVATLGTVTKDGKTDAPPEGAA 957
Cdd:PHA03247 2839 PPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPA 2876
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
 717-962 1.70e-03

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 42.25  E-value: 1.70e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  717 ANSTPTAPgVVRDVGSsvWAAGTSAPEekgwakftdfqpfCCSESGPRC---SSPVDTECShAEGSRSQGPEKASQASYF 793
Cdd:pfam17823  62 AATAAPAP-VTLTKGT--SAAHLNSTE-------------VTAEHTPHGtdlSEPATREGA-ADGAASRALAAAASSSPS 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  794 AVSPASPCAWNVCVTRKAPLLASDSSSSGGSHSEDGDQKAASAMDAVSRGPGREAPPLPTVARTEEAVGRVGCADSRLLS 873
Cdd:pfam17823 125 SAAQSLPAAIAALPSEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPA 204

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  874 PACPAPKEVTAAPAVAVPpeatvAITTALSKAGPAIPTPAVSSALAVAVPLGPIMAVTAAPAMVATLGTVTKDG------ 947
Cdd:pfam17823 205 TLTPARGISTAATATGHP-----AAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGdpharr 279

                         250       260
                  ....*....|....*....|....*...
gi 768031584  948 -------------KTDAPPEGAALNGPV 962
Cdd:pfam17823 280 lspakhmpsdtmaRNPAAPMGAQAQGPI 307
 
Name Accession Description Interval E-value
SAPS pfam04499
SIT4 phosphatase-associated protein; This family includes a conserved region from a group of ...
 150-555 2.29e-158

SIT4 phosphatase-associated protein; This family includes a conserved region from a group of yeast proteins that associate with the SIT4 phosphatase. This association is required for SIT4's role in G1 cyclin transcription and for bud formation. This family also includes homologous regions from other eukaryotes.


Pssm-ID: 398279  Cd Length: 383  Bit Score: 470.57  E-value: 2.29e-158
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  150 IGNLIARKTEQVITFLKKKDKFISLVLKHIGTSALMDLLLRLVSCVEPaGLRQDVLHWLNEEKVIQRLVELIHPSQDEDR 229
Cdd:pfam04499   1 NENLLDRKTDQMIEFIRKQENFVDKFLKHIDTPAIMDLLLKLISTDKP-ELPTGVIEWLNEQNLIPKLLDLLSPSYDEDI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  230 QSNASQTLCDIVRLGRDQGSQLQEALEPDPLLTALESrQDCVEQLLKNMFDGdRTESCLVSGTQVLLTLLETRRVGTEGL 309
Cdd:pfam04499  80 QSNASDFLKAIITISRNAPLQLQSSIGPNELTRELVS-EESVEKLLDNMLKG-KSGSALVNGVGIIIELIRKNNSDYDPV 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  310 VDSFSQGLERSYAVSSSV-----LHGIEPRLKDFHQLLLNPPKKKAILTTIGVLEEPLGNARLHGARLMAALLHTNTPSI 384
Cdd:pfam04499 158 QLLYTTLEEHPPSDRDPIylghlLRAFSPHLPDFHQLLLDPPKDSPLQTTLGVLIEPLGFERFKIVELIAELLHCSNMSL 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  385 NQE---------LCRLNTMDLLLDLFFKYTWNNFLHFQVELCIAAILshaareerteasgsesrvepphengNRSLETPQ 455
Cdd:pfam04499 238 LNEkkgeklkikLVDLGIIPTILDLFFKYPWNNFLHNVVEDIIQQIL-------------------------NGPMDFSY 292

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  456 paaslpDNTMVTHLFQKCCLVQRILEAWEANDHTQAAGGMRRGNMGHLTRIANAVVQNLERGPVQTHISEVIRGLpadCR 535
Cdd:pfam04499 293 ------NSFLVVDLFTDCNLTQRILEGQKESDRFQAEKGPRLGYMGHLTLIAEEVVKFSEKYPPELISPDILEIL---EN 363

                         410       420
                  ....*....|....*....|
gi 768031584  536 GRWESFVEETLTETNRRNTV 555
Cdd:pfam04499 364 EEWEEYVEETLEETRERYNV 383
PHA03247 PHA03247
large tegument protein UL36; Provisional
 762-957 4.31e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.09  E-value: 4.31e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  762 GPRCSSPVDTECSHAEGSRSQGPEKASQASYFAVSPASPCAWNVCVTRKA--PLLASDSSSSGGSHSEDGDQKAASAMDA 839
Cdd:PHA03247 2682 RPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQAspALPAAPAPPAVPAGPATPGGPARPARPP 2761

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  840 VSRGPGREAPPLPTVARTEEAVGRVGCADSRLLSPACPAPKEVTAAPAVAVPPEAtvAITTALSKAGPaIPTPAVSSALA 919
Cdd:PHA03247 2762 TTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAA--ALPPAASPAGP-LPPPTSAQPTA 2838

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 768031584  920 VAVPLGPIMAVTAAPAMVATLGTVTKDGKTDAPPEGAA 957
Cdd:PHA03247 2839 PPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPA 2876
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
796-958 1.78e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 48.72  E-value: 1.78e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584 796 SPASPCAWNVCVTRKA--PLLASDSSSSGGSHSEDGDQKAASAMDAVSRGPGREAPPLPTVARTEEAVGRVGCADSRLLS 873
Cdd:PRK12323 373 GPATAAAAPVAQPAPAaaAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAP 452

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584 874 PACPAPKEVTAAPAVAVPPEATVAITTALSKAGPAIPTPAVSSA-----LAVAVPLGPIMAVTAAPAMVATLGTvTKDGK 948
Cdd:PRK12323 453 APAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPppweeLPPEFASPAPAQPDAAPAGWVAESI-PDPAT 531

                        170
                 ....*....|
gi 768031584 949 TDAPPEGAAL 958
Cdd:PRK12323 532 ADPDDAFETL 541
PHA02682 PHA02682
ORF080 virion core protein; Provisional
 831-935 9.34e-05

ORF080 virion core protein; Provisional


Pssm-ID: 177464 [Multi-domain]  Cd Length: 280  Bit Score: 45.24  E-value: 9.34e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584 831 QKAASAMDAVSRGPGREAPPLPTVARTEEAVGRVGCAdsrllsPACPAPKEVTAAPAVAVPPEATVAITTALSKAGPAIP 910
Cdd:PHA02682  63 QSRLKANSACMQRPSGQSPLAPSPACAAPAPACPACA------PAAPAPAVTCPAPAPACPPATAPTCPPPAVCPAPARP 136

                         90       100
                 ....*....|....*....|....*
gi 768031584 911 TPAVSSALAVAVPLGPIMAVTAAPA 935
Cdd:PHA02682 137 APACPPSTRQCPPAPPLPTPKPAPA 161
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
839-939 9.70e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 42.91  E-value: 9.70e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584 839 AVSRGPGREAPPLPTVARTEEAVGRVgcADSRLLSPACPAPKEVTAAPAVAVPPEATVAITTALSKAGPAIPTPAVSSAL 918
Cdd:PRK07003 361 AVTGGGAPGGGVPARVAGAVPAPGAR--AAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR 438

                         90       100
                 ....*....|....*....|.
gi 768031584 919 AVAVPLGPIMAVTAAPAMVAT 939
Cdd:PRK07003 439 GDDAADGDAPVPAKANARASA 459
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
 717-962 1.70e-03

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 42.25  E-value: 1.70e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  717 ANSTPTAPgVVRDVGSsvWAAGTSAPEekgwakftdfqpfCCSESGPRC---SSPVDTECShAEGSRSQGPEKASQASYF 793
Cdd:pfam17823  62 AATAAPAP-VTLTKGT--SAAHLNSTE-------------VTAEHTPHGtdlSEPATREGA-ADGAASRALAAAASSSPS 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  794 AVSPASPCAWNVCVTRKAPLLASDSSSSGGSHSEDGDQKAASAMDAVSRGPGREAPPLPTVARTEEAVGRVGCADSRLLS 873
Cdd:pfam17823 125 SAAQSLPAAIAALPSEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPA 204

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  874 PACPAPKEVTAAPAVAVPpeatvAITTALSKAGPAIPTPAVSSALAVAVPLGPIMAVTAAPAMVATLGTVTKDG------ 947
Cdd:pfam17823 205 TLTPARGISTAATATGHP-----AAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGdpharr 279

                         250       260
                  ....*....|....*....|....*...
gi 768031584  948 -------------KTDAPPEGAALNGPV 962
Cdd:pfam17823 280 lspakhmpsdtmaRNPAAPMGAQAQGPI 307
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
833-957 1.77e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 42.14  E-value: 1.77e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584 833 AASAMDAVSRGPGREAPPlptVARTEEAVGRVGCADSRLLSPACPAPKEVTAAPAVAVPPEATVAITTALSKAGPAIPTP 912
Cdd:PRK07003 409 ALAPKAAAAAAATRAEAP---PAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAP 485

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 768031584 913 AvSSALAVAVPLGPIMAVTAAPAMVATLGTVTKDGKTDAPPEGAA 957
Cdd:PRK07003 486 P-DAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPA 529
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 873-962 1.97e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 42.10  E-value: 1.97e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584 873 SPACPAPKEVTAAPAVAVPPEATVAITTALSKAGPAIPTPAVSSALAVAVPLGPIMAVTAAPAMVATLGTVTKDGKTDAP 952
Cdd:PRK14950 370 KPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAIPVDEKPKYTPPAP 449

                         90
                 ....*....|..
gi 768031584 953 P--EGAALNGPV 962
Cdd:PRK14950 450 PkeEEKALIADG 461
PHA03247 PHA03247
large tegument protein UL36; Provisional
 843-962 2.04e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 42.23  E-value: 2.04e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  843 GPGREAPPLPTVARTEEAVGRV-----GCADSRLLSPACP--APKEVTAAPAVA---------VPPEATVAITTALSKAG 906
Cdd:PHA03247 2640 PHPPPTVPPPERPRDDPAPGRVsrprrARRLGRAAQASSPpqRPRRRAARPTVGsltsladppPPPPTPEPAPHALVSAT 2719

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 768031584  907 PAIPTPAVSSALAVAVPLGPIM-AVTAAPAMVATLGTVTKDGKTDAPPEGAALNGPV 962
Cdd:PHA03247 2720 PLPPGPAAARQASPALPAAPAPpAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPA 2776
PHA03247 PHA03247
large tegument protein UL36; Provisional
 716-961 2.13e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 42.23  E-value: 2.13e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  716 PANSTPTAPGVVRDvGSSVWAAGTSAPEEKGWAKFTDFQP----FCCSESGPRCSSPVDTECSHAEGSRSQGPEKASQAS 791
Cdd:PHA03247 2593 PQSARPRAPVDDRG-DPRGPAPPSPLPPDTHAPDPPPPSPspaaNEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLG 2671

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  792 YFAVSPASPCAWnvcvTRKA--PLLASdssssggshsedgdqkAASAMDAVSRGPGREAPPLPTVARTEEAVGRvgcADS 869
Cdd:PHA03247 2672 RAAQASSPPQRP----RRRAarPTVGS----------------LTSLADPPPPPPTPEPAPHALVSATPLPPGP---AAA 2728

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584  870 RLLSPACPApkevtaAPAVAVPPEATVAITTALSKAGPAIPTPAVSSALAVAVPLGPIMAVTAAPAMVATLGTVTKDGKT 949
Cdd:PHA03247 2729 RQASPALPA------APAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPW 2802

                         250
                  ....*....|..
gi 768031584  950 DAPPEGAALNGP 961
Cdd:PHA03247 2803 DPADPPAAVLAP 2814
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
843-962 9.97e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 39.86  E-value: 9.97e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768031584 843 GPGREAPPLPTVARTEEAVGRVGCADSRLLSPACPAPKEVTAAPAVAVPPEATVAITTALSKAGPAIPTPAVSSALAVAV 922
Cdd:PRK12323 367 QSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGG 446

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 768031584 923 PLGPIMAVTAAPAMVATLGTVTKDGKTDAPPEGAALNGPV 962
Cdd:PRK12323 447 APAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPA 486
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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