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Conserved domains on  [gi|767969613|ref|XP_011540914|]
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protein FAM76B isoform X3 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FAM76 super family cl24571
FAM76 protein; This family of proteins is functionally uncharacterized. This family of ...
 113-239 1.70e-43

FAM76 protein; This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 233 and 341 amino acids in length.


The actual alignment was detected with superfamily member pfam16046:

Pssm-ID: 464993 [Multi-domain]  Cd Length: 303  Bit Score: 149.17  E-value: 1.70e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767969613  113 KQSHKSSATIQNETPKKKPKLESKPSNGDSSSinqSADSGGTDNFVLISQLKEEVMSLKRLLQQRDQTILEKDKKLTELK 192
Cdd:pfam16046 180 SRPSRVSVTKLGSGPLPTKISRAKPGNGTSGD---TVDPNSSDHVVAITQLKEQIASLQKQLAQKDQQLLEKDKQITELK 256

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 767969613  193 ADFQYQESNLRTKMNSMEKAHKETVEQLQAKNRELLKQVAALSKGKK 239
Cdd:pfam16046 257 AKHFTKERELRNKMKTMEKEHEDKVEQLQIKIRSLLKEVATLSKSKK 303
 
Name Accession Description Interval E-value
FAM76 pfam16046
FAM76 protein; This family of proteins is functionally uncharacterized. This family of ...
 113-239 1.70e-43

FAM76 protein; This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 233 and 341 amino acids in length.


Pssm-ID: 464993 [Multi-domain]  Cd Length: 303  Bit Score: 149.17  E-value: 1.70e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767969613  113 KQSHKSSATIQNETPKKKPKLESKPSNGDSSSinqSADSGGTDNFVLISQLKEEVMSLKRLLQQRDQTILEKDKKLTELK 192
Cdd:pfam16046 180 SRPSRVSVTKLGSGPLPTKISRAKPGNGTSGD---TVDPNSSDHVVAITQLKEQIASLQKQLAQKDQQLLEKDKQITELK 256

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 767969613  193 ADFQYQESNLRTKMNSMEKAHKETVEQLQAKNRELLKQVAALSKGKK 239
Cdd:pfam16046 257 AKHFTKERELRNKMKTMEKEHEDKVEQLQIKIRSLLKEVATLSKSKK 303
 
Name Accession Description Interval E-value
FAM76 pfam16046
FAM76 protein; This family of proteins is functionally uncharacterized. This family of ...
 113-239 1.70e-43

FAM76 protein; This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 233 and 341 amino acids in length.


Pssm-ID: 464993 [Multi-domain]  Cd Length: 303  Bit Score: 149.17  E-value: 1.70e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767969613  113 KQSHKSSATIQNETPKKKPKLESKPSNGDSSSinqSADSGGTDNFVLISQLKEEVMSLKRLLQQRDQTILEKDKKLTELK 192
Cdd:pfam16046 180 SRPSRVSVTKLGSGPLPTKISRAKPGNGTSGD---TVDPNSSDHVVAITQLKEQIASLQKQLAQKDQQLLEKDKQITELK 256

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 767969613  193 ADFQYQESNLRTKMNSMEKAHKETVEQLQAKNRELLKQVAALSKGKK 239
Cdd:pfam16046 257 AKHFTKERELRNKMKTMEKEHEDKVEQLQIKIRSLLKEVATLSKSKK 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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