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Conserved domains on  [gi|767970123|ref|XP_011541112|]
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G protein-activated inward rectifier potassium channel 4 isoform X1 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
IRK_C pfam17655
Inward rectifier potassium channel C-terminal domain; This cytoplasmic C-terminal domain has ...
200-371 1.34e-105

Inward rectifier potassium channel C-terminal domain; This cytoplasmic C-terminal domain has an Ig fold.


:

Pssm-ID: 435949  Cd Length: 174  Bit Score: 309.51  E-value: 1.34e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767970123  200 LMFSNNAVISMRDEKLCLMFRVGDLRNSHIVEASIRAKLIKSRQTKEGEFIPLNQTDINVGFDTGDDRLFLVSPLIISHE 279
Cdd:pfam17655   1 LKFSKNAVICQRDGKLCLMFRVGDLRKSHLIEAQVRAQLLKTRVTKEGEVIPLYQVDLDLGVDTGSDRIFLVWPLTVYHV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767970123  280 INQKSPFWEMSQAQLHQEEFEVVVILEGMVEATGMTCQARSSYMDTEVLWGHRFTPVLTLEK-GFYEVDYNTFHDTYETN 358
Cdd:pfam17655  81 IDEDSPLYDLSAKDLLEEDFELVVILEGTVESTGMTTQARTSYLPEEILWGHRFEPVVSYSKeGRYVVDYSNFDKTVEVP 160
                         170
                  ....*....|...
gi 767970123  359 TPSCCAKELAEMK 371
Cdd:pfam17655 161 TPHCSARELDEKK 173
IRK pfam01007
Inward rectifier potassium channel;
54-193 1.10e-77

Inward rectifier potassium channel;


:

Pssm-ID: 425984  Cd Length: 141  Bit Score: 237.08  E-value: 1.10e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767970123   54 MEKSGKCNVHHGNV-QETYRYLSDLFTTLVDLKWRFNLLVFTMVYTVTWLFFGFIWWLIAYIRGDLDHVGDQEWIPCVEN 132
Cdd:pfam01007   1 VSKNGHCNVVFTNIpEKSLRYLRDIFTTLVDLKWRYMLLLFSLSFVLSWLFFGLIWYLIAYSHGDLDADPGDGHTPCVYN 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767970123  133 LSGFVSAFLFSIETETTIGYGFRVITEKCPEGIILLLVQAILGSIVNAFMVGCMFVKISQP 193
Cdd:pfam01007  81 VHSFTGAFLFSIETQTTIGYGFRYVTEECPEAIFLLVIQSIVGCLIDAFMIGIVFAKMARP 141
 
Name Accession Description Interval E-value
IRK_C pfam17655
Inward rectifier potassium channel C-terminal domain; This cytoplasmic C-terminal domain has ...
200-371 1.34e-105

Inward rectifier potassium channel C-terminal domain; This cytoplasmic C-terminal domain has an Ig fold.


Pssm-ID: 435949  Cd Length: 174  Bit Score: 309.51  E-value: 1.34e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767970123  200 LMFSNNAVISMRDEKLCLMFRVGDLRNSHIVEASIRAKLIKSRQTKEGEFIPLNQTDINVGFDTGDDRLFLVSPLIISHE 279
Cdd:pfam17655   1 LKFSKNAVICQRDGKLCLMFRVGDLRKSHLIEAQVRAQLLKTRVTKEGEVIPLYQVDLDLGVDTGSDRIFLVWPLTVYHV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767970123  280 INQKSPFWEMSQAQLHQEEFEVVVILEGMVEATGMTCQARSSYMDTEVLWGHRFTPVLTLEK-GFYEVDYNTFHDTYETN 358
Cdd:pfam17655  81 IDEDSPLYDLSAKDLLEEDFELVVILEGTVESTGMTTQARTSYLPEEILWGHRFEPVVSYSKeGRYVVDYSNFDKTVEVP 160
                         170
                  ....*....|...
gi 767970123  359 TPSCCAKELAEMK 371
Cdd:pfam17655 161 TPHCSARELDEKK 173
IRK pfam01007
Inward rectifier potassium channel;
54-193 1.10e-77

Inward rectifier potassium channel;


Pssm-ID: 425984  Cd Length: 141  Bit Score: 237.08  E-value: 1.10e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767970123   54 MEKSGKCNVHHGNV-QETYRYLSDLFTTLVDLKWRFNLLVFTMVYTVTWLFFGFIWWLIAYIRGDLDHVGDQEWIPCVEN 132
Cdd:pfam01007   1 VSKNGHCNVVFTNIpEKSLRYLRDIFTTLVDLKWRYMLLLFSLSFVLSWLFFGLIWYLIAYSHGDLDADPGDGHTPCVYN 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767970123  133 LSGFVSAFLFSIETETTIGYGFRVITEKCPEGIILLLVQAILGSIVNAFMVGCMFVKISQP 193
Cdd:pfam01007  81 VHSFTGAFLFSIETQTTIGYGFRYVTEECPEAIFLLVIQSIVGCLIDAFMIGIVFAKMARP 141
 
Name Accession Description Interval E-value
IRK_C pfam17655
Inward rectifier potassium channel C-terminal domain; This cytoplasmic C-terminal domain has ...
200-371 1.34e-105

Inward rectifier potassium channel C-terminal domain; This cytoplasmic C-terminal domain has an Ig fold.


Pssm-ID: 435949  Cd Length: 174  Bit Score: 309.51  E-value: 1.34e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767970123  200 LMFSNNAVISMRDEKLCLMFRVGDLRNSHIVEASIRAKLIKSRQTKEGEFIPLNQTDINVGFDTGDDRLFLVSPLIISHE 279
Cdd:pfam17655   1 LKFSKNAVICQRDGKLCLMFRVGDLRKSHLIEAQVRAQLLKTRVTKEGEVIPLYQVDLDLGVDTGSDRIFLVWPLTVYHV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767970123  280 INQKSPFWEMSQAQLHQEEFEVVVILEGMVEATGMTCQARSSYMDTEVLWGHRFTPVLTLEK-GFYEVDYNTFHDTYETN 358
Cdd:pfam17655  81 IDEDSPLYDLSAKDLLEEDFELVVILEGTVESTGMTTQARTSYLPEEILWGHRFEPVVSYSKeGRYVVDYSNFDKTVEVP 160
                         170
                  ....*....|...
gi 767970123  359 TPSCCAKELAEMK 371
Cdd:pfam17655 161 TPHCSARELDEKK 173
IRK pfam01007
Inward rectifier potassium channel;
54-193 1.10e-77

Inward rectifier potassium channel;


Pssm-ID: 425984  Cd Length: 141  Bit Score: 237.08  E-value: 1.10e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767970123   54 MEKSGKCNVHHGNV-QETYRYLSDLFTTLVDLKWRFNLLVFTMVYTVTWLFFGFIWWLIAYIRGDLDHVGDQEWIPCVEN 132
Cdd:pfam01007   1 VSKNGHCNVVFTNIpEKSLRYLRDIFTTLVDLKWRYMLLLFSLSFVLSWLFFGLIWYLIAYSHGDLDADPGDGHTPCVYN 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767970123  133 LSGFVSAFLFSIETETTIGYGFRVITEKCPEGIILLLVQAILGSIVNAFMVGCMFVKISQP 193
Cdd:pfam01007  81 VHSFTGAFLFSIETQTTIGYGFRYVTEECPEAIFLLVIQSIVGCLIDAFMIGIVFAKMARP 141
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.20
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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