|
Name |
Accession |
Description |
Interval |
E-value |
| INCENP_N |
pfam12178 |
Chromosome passenger complex (CPC) protein INCENP N terminal; This domain family is found in ... |
6-41 |
8.08e-17 |
|
Chromosome passenger complex (CPC) protein INCENP N terminal; This domain family is found in eukaryotes, and is approximately 40 amino acids in length. INCENP is a regulatory protein in the chromosome passenger complex. It is involved in regulation of the catalytic protein Aurora B. It performs this function in association with two other proteins - Survivin and Borealin. These proteins form a tight three-helical bundle. The N terminal domain is the domain involved in formation of this three helical bundle.
Pssm-ID: 463484 [Multi-domain] Cd Length: 36 Bit Score: 74.66 E-value: 8.08e-17
10 20 30
....*....|....*....|....*....|....*.
gi 767968082 6 PGPIHLLELCDQKLMEFLCNMDNKDLVWLEEIQEEA 41
Cdd:pfam12178 1 SGPASLLEVCDQKLSEFLCEIDNKHLVWLEEIEEEA 36
|
|
| INCENP_ARK-bind |
pfam03941 |
Inner centromere protein, ARK binding region; This region of the inner centromere protein has ... |
842-896 |
3.12e-15 |
|
Inner centromere protein, ARK binding region; This region of the inner centromere protein has been found to be necessary and sufficient for binding to aurora-related kinase. This interaction has been implicated in the coordination of chromosome segregation with cell division in yeast.
Pssm-ID: 461100 [Multi-domain] Cd Length: 53 Bit Score: 70.69 E-value: 3.12e-15
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 767968082 842 NSDDSTDDEAHPRKPIPTWARGTPLSQAIIHQYyhPPNLLELFGTILPLDLEDIF 896
Cdd:pfam03941 1 NSDDEDDDEDEPRKPVPSWAQSPNLRQALIRQE--PIDPDEIFGPIPPLNLEEIF 53
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
536-794 |
2.52e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.57 E-value: 2.52e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 536 EKERQrLENLRRkeEAEQLRR-QKVEEDKRRRLEEVKLKR----EERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKT 610
Cdd:COG1196 197 ELERQ-LEPLER--QAEKAERyRELKEELKELEAELLLLKlrelEAELEELEAELEELEAELEELEAELAELEAELEELR 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 611 EKAKEERL---AEEKAKKKAAAKKMEEVEARRKQEEEARRLRW-LQQVRAQEEEERRHQELLQKKKEEEQERLRKAAEAK 686
Cdd:COG1196 274 LELEELELeleEAQAEEYELLAELARLEQDIARLEERRRELEErLEELEEELAELEEELEELEEELEELEEELEEAEEEL 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 687 RLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKE 766
Cdd:COG1196 354 EEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAEL 433
|
250 260
....*....|....*....|....*...
gi 767968082 767 EQQRLAERQLQEEQEKKAKEAAGASKAL 794
Cdd:COG1196 434 EEEEEEEEEALEEAAEEEAELEEEEEAL 461
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
535-788 |
2.77e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.57 E-value: 2.77e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 535 VEKERQRLENLRRKEEAEQLRRQKVEEDKrRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAK 614
Cdd:COG1196 269 LEELRLELEELELELEEAQAEEYELLAEL-ARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELE 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 615 --EERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQVRAQEEEERRHQELLQKKKEEEQERLRKAAEAKRLAeqr 692
Cdd:COG1196 348 eaEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELE--- 424
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 693 eqerreqerreqerreqerreqerreqerQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLA 772
Cdd:COG1196 425 -----------------------------ELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALL 475
|
250
....*....|....*.
gi 767968082 773 ERQLQEEQEKKAKEAA 788
Cdd:COG1196 476 EAALAELLEELAEAAA 491
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
535-791 |
3.04e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.19 E-value: 3.04e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 535 VEKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKfaQIDEKTEKAK 614
Cdd:COG1196 244 LEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERR--RELEERLEEL 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 615 EERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQVRAQEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQ 694
Cdd:COG1196 322 EEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQ 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 695 ERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAER 774
Cdd:COG1196 402 LEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAE 481
|
250
....*....|....*..
gi 767968082 775 QLQEEQEKKAKEAAGAS 791
Cdd:COG1196 482 LLEELAEAAARLLLLLE 498
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
537-785 |
3.30e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 64.39 E-value: 3.30e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 537 KERQRLENLRRK-EEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMK--------EEKKKQIEQKFAQID 607
Cdd:PTZ00121 1454 EEAKKAEEAKKKaEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKkadeakkaEEAKKADEAKKAEEA 1533
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 608 EKTE---KAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARR---------LRWLQQVRAQEEEERRHQELLQK----K 671
Cdd:PTZ00121 1534 KKADeakKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKnmalrkaeeAKKAEEARIEEVMKLYEEEKKMKaeeaK 1613
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 672 KEEEQ----ERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKA 747
Cdd:PTZ00121 1614 KAEEAkikaEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEA 1693
|
250 260 270
....*....|....*....|....*....|....*...
gi 767968082 748 LRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAK 785
Cdd:PTZ00121 1694 LKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIK 1731
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
538-792 |
5.96e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 63.62 E-value: 5.96e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 538 ERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREErLRKVLQARERVEQMK--EEKKKQIEQKFAQIDEKTEKAKE 615
Cdd:PTZ00121 1573 EEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEE-AKKAEEAKIKAEELKkaEEEKKKVEQLKKKEAEEKKKAEE 1651
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 616 ERlaeekakKKAAAKKMEEVEARRKQEEEARRLRwlqqvraqeeeerrhqellQKKKEEEQERlRKAAEAKRLAEQREQE 695
Cdd:PTZ00121 1652 LK-------KAEEENKIKAAEEAKKAEEDKKKAE-------------------EAKKAEEDEK-KAAEALKKEAEEAKKA 1704
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 696 RREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQ 775
Cdd:PTZ00121 1705 EELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEE 1784
|
250
....*....|....*..
gi 767968082 776 LQEEQEKKAKEAAGASK 792
Cdd:PTZ00121 1785 LDEEDEKRRMEVDKKIK 1801
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
536-794 |
7.88e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 63.24 E-value: 7.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 536 EKERQRLENLRRKEEAEQLRRQKVEEDKR-----RRLEEVK----LKREERLRKVLQARERVEQMKEEKKKQIEQKFAQI 606
Cdd:PTZ00121 1506 AEAKKKADEAKKAEEAKKADEAKKAEEAKkadeaKKAEEKKkadeLKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEE 1585
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 607 DEKTEKAKEERLAEEKAKKKAAA----KKME----EVEARRKQEEEARRLRWLQQVRAQEEEERRhqellQKKKEEEQER 678
Cdd:PTZ00121 1586 AKKAEEARIEEVMKLYEEEKKMKaeeaKKAEeakiKAEELKKAEEEKKKVEQLKKKEAEEKKKAE-----ELKKAEEENK 1660
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 679 LRKAAEAKRlAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAErELQEREKALRLQKEQLQRE 758
Cdd:PTZ00121 1661 IKAAEEAKK-AEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAE-ELKKAEEENKIKAEEAKKE 1738
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 767968082 759 LEEKKKKEEQQRLAE------RQLQEEQEKKAKEAAGASKAL 794
Cdd:PTZ00121 1739 AEEDKKKAEEAKKDEeekkkiAHLKKEEEKKAEEIRKEKEAV 1780
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
537-792 |
1.02e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 62.85 E-value: 1.02e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 537 KERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMK---------EEKKKQIEQKFAQID 607
Cdd:PTZ00121 1287 EEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKkaaeaakaeAEAAADEAEAAEEKA 1366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 608 EKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQVRAQEEEERRHqellqKKKEEEQerlRKAAEAKR 687
Cdd:PTZ00121 1367 EAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEA-----KKKAEEK---KKADEAKK 1438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 688 LAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQE-REKALRLQKEQLQRELEEKKKKE 766
Cdd:PTZ00121 1439 KAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEaKKKADEAKKAAEAKKKADEAKKA 1518
|
250 260
....*....|....*....|....*.
gi 767968082 767 EQQRLAERQLQEEQEKKAKEAAGASK 792
Cdd:PTZ00121 1519 EEAKKADEAKKAEEAKKADEAKKAEE 1544
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
534-687 |
1.20e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 62.47 E-value: 1.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 534 FVEKERQRLENLRRKEE----AEQLRRqkvEEDKRRRLEEVKLKREERLRKVLQARERVEQMK----EEKKKQIEQKfaQ 605
Cdd:PTZ00121 1601 YEEEKKMKAEEAKKAEEakikAEELKK---AEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKikaaEEAKKAEEDK--K 1675
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 606 IDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLrwlQQVRAQEEEERRHQELLQKKKEEEQerlRKAAEA 685
Cdd:PTZ00121 1676 KAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKA---EELKKAEEENKIKAEEAKKEAEEDK---KKAEEA 1749
|
..
gi 767968082 686 KR 687
Cdd:PTZ00121 1750 KK 1751
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
536-793 |
5.57e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 60.54 E-value: 5.57e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 536 EKERQRLENLRRKEEAeqlrRQKVEEDKR-----RRLEEVKLKREERlRKVLQARERVEQMK--EEKKKQIEQKfAQIDE 608
Cdd:PTZ00121 1401 EEDKKKADELKKAAAA----KKKADEAKKkaeekKKADEAKKKAEEA-KKADEAKKKAEEAKkaEEAKKKAEEA-KKADE 1474
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 609 KTEKAKEERlAEEKAKKKAAAKKMEEVEARRKQE-----------EEARRLRWLQQVRAQEEEERRHQELLQKKKEE--E 675
Cdd:PTZ00121 1475 AKKKAEEAK-KADEAKKKAEEAKKKADEAKKAAEakkkadeakkaEEAKKADEAKKAEEAKKADEAKKAEEKKKADElkK 1553
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 676 QERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQerlQAERELQEREKALRLQKEQL 755
Cdd:PTZ00121 1554 AEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAE---EAKKAEEAKIKAEELKKAEE 1630
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 767968082 756 QRELEEKKKKEEQQ--RLAERQLQEEQEKKAKEAAGASKA 793
Cdd:PTZ00121 1631 EKKKVEQLKKKEAEekKKAEELKKAEEENKIKAAEEAKKA 1670
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
521-687 |
5.51e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 57.07 E-value: 5.51e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 521 KRNTPLRMDPKCSFVEKER----QRLENLRRKEEAEQLRRqkvEEDKRRRLEEVKlKREERLRKVLQARERVEQMK---E 593
Cdd:PTZ00121 1575 DKNMALRKAEEAKKAEEARieevMKLYEEEKKMKAEEAKK---AEEAKIKAEELK-KAEEEKKKVEQLKKKEAEEKkkaE 1650
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 594 EKKKQIEQKFAQIDEKTEKAKEERlAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQVRAQEEEERrhqellQKKKE 673
Cdd:PTZ00121 1651 ELKKAEEENKIKAAEEAKKAEEDK-KKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKA------EELKK 1723
|
170
....*....|....
gi 767968082 674 EEQERLRKAAEAKR 687
Cdd:PTZ00121 1724 AEEENKIKAEEAKK 1737
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
537-793 |
9.08e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 56.30 E-value: 9.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 537 KERQRLENLRRKEEAEQLRRQKVEEDKR-----RRLEEVK----LKREERLRKVLQAR--------ERVEQMKEEKKKQI 599
Cdd:PTZ00121 1149 EDAKRVEIARKAEDARKAEEARKAEDAKkaeaaRKAEEVRkaeeLRKAEDARKAEAARkaeeerkaEEARKAEDAKKAEA 1228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 600 EQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQVRAQEeeerrhqellQKKKEEE---Q 676
Cdd:PTZ00121 1229 VKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAE----------EKKKADEakkA 1298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 677 ERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERElQEREKALRLQKEQLQ 756
Cdd:PTZ00121 1299 EEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAA-EEKAEAAEKKKEEAK 1377
|
250 260 270
....*....|....*....|....*....|....*....
gi 767968082 757 RELEEKKKKEEQQRLAE--RQLQEEQEKKAKEAAGASKA 793
Cdd:PTZ00121 1378 KKADAAKKKAEEKKKADeaKKKAEEDKKKADELKKAAAA 1416
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
536-786 |
2.84e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 54.76 E-value: 2.84e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 536 EKERQRLENLRRKEE----AEQLRRqKVEEDKRRRlEEVKlKREERLRKVLQARERVEQMK--EEKKKQIEQKfAQIDEK 609
Cdd:PTZ00121 1374 EEAKKKADAAKKKAEekkkADEAKK-KAEEDKKKA-DELK-KAAAAKKKADEAKKKAEEKKkaDEAKKKAEEA-KKADEA 1449
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 610 TEKAKEERlaeEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQV--RAQEEEERRHQELLQKKKEEE---QERLRKAAE 684
Cdd:PTZ00121 1450 KKKAEEAK---KAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKaeEAKKKADEAKKAAEAKKKADEakkAEEAKKADE 1526
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 685 AKRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKK 764
Cdd:PTZ00121 1527 AKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKK 1606
|
250 260
....*....|....*....|....
gi 767968082 765 KEEQQ--RLAERQLQEEQEKKAKE 786
Cdd:PTZ00121 1607 MKAEEakKAEEAKIKAEELKKAEE 1630
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
537-793 |
3.20e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 54.76 E-value: 3.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 537 KERQRLENLRRKEEA---EQLRR----QKVEEDKR-----RRLEEVKLKRE----ERLRKVLQARERVEQMKEEKKKQIE 600
Cdd:PTZ00121 1203 EAARKAEEERKAEEArkaEDAKKaeavKKAEEAKKdaeeaKKAEEERNNEEirkfEEARMAHFARRQAAIKAEEARKADE 1282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 601 QKFAQIDEKTEKAKE-ERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQVRAQEEEERRHQELLQKKKEEEQERL 679
Cdd:PTZ00121 1283 LKKAEEKKKADEAKKaEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAA 1362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 680 RKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAErELQEREKALRLQKEQLQREL 759
Cdd:PTZ00121 1363 EEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKAD-EAKKKAEEKKKADEAKKKAE 1441
|
250 260 270
....*....|....*....|....*....|....
gi 767968082 760 EEKKKKEEQQRLAERQLQEEQEKKAKEAAGASKA 793
Cdd:PTZ00121 1442 EAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEA 1475
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
537-787 |
3.31e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 54.76 E-value: 3.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 537 KERQRLENLRRKEEAEQLRRQKVEEDKR-----RRLEEVklKREERLRKVLQARERVEQMKEEKKKQIEQkfAQIDEKTE 611
Cdd:PTZ00121 1137 EDARKAEEARKAEDAKRVEIARKAEDARkaeeaRKAEDA--KKAEAARKAEEVRKAEELRKAEDARKAEA--ARKAEEER 1212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 612 KAKEERlaeeKAKKKAAAKKMEEVEARRKQEEEARR---LRWLQQVRAQEEEERRHQELLQKKKEEEQErlRKAAEAKRl 688
Cdd:PTZ00121 1213 KAEEAR----KAEDAKKAEAVKKAEEAKKDAEEAKKaeeERNNEEIRKFEEARMAHFARRQAAIKAEEA--RKADELKK- 1285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 689 AEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQ 768
Cdd:PTZ00121 1286 AEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEK 1365
|
250
....*....|....*....
gi 767968082 769 QRLAERQlQEEQEKKAKEA 787
Cdd:PTZ00121 1366 AEAAEKK-KEEAKKKADAA 1383
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
521-794 |
1.37e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 52.45 E-value: 1.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 521 KRNTPLRMDPKCSFVEKERQR---LENLRRKEEAEQLRRQKVEEDkrRRLEEVKlKREERLRKVLQARERVEQMK-EEKK 596
Cdd:PTZ00121 1070 EGLKPSYKDFDFDAKEDNRADeatEEAFGKAEEAKKTETGKAEEA--RKAEEAK-KKAEDARKAEEARKAEDARKaEEAR 1146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 597 KQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEeearrLRWLQQVRAQEEEerrhqellqKKKEEEQ 676
Cdd:PTZ00121 1147 KAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEE-----LRKAEDARKAEAA---------RKAEEER 1212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 677 --ERLRKAAEAKRL-AEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQK- 752
Cdd:PTZ00121 1213 kaEEARKAEDAKKAeAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKa 1292
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 767968082 753 EQLQRELEEKKKKEEQQRLAERQLQEEQEKKAKEAAGASKAL 794
Cdd:PTZ00121 1293 DEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAA 1334
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
536-788 |
2.04e-06 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 51.90 E-value: 2.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 536 EKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKE 615
Cdd:pfam02463 206 AKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQE 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 616 ERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQVRAQEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQE 695
Cdd:pfam02463 286 EELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQ 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 696 RREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQ 775
Cdd:pfam02463 366 EKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGK 445
|
250
....*....|...
gi 767968082 776 LQEEQEKKAKEAA 788
Cdd:pfam02463 446 LTEEKEELEKQEL 458
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
533-615 |
5.67e-06 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 50.16 E-value: 5.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 533 SFVEKERQRLENLRR------KEEAEQLRRQkVEEDKRRRLEEVK------LKREERLRKVLQARERVEQMKEEKKKQIE 600
Cdd:PRK12704 42 RILEEAKKEAEAIKKealleaKEEIHKLRNE-FEKELRERRNELQklekrlLQKEENLDRKLELLEKREEELEKKEKELE 120
|
90
....*....|....*
gi 767968082 601 QKFAQIDEKTEKAKE 615
Cdd:PRK12704 121 QKQQELEKKEEELEE 135
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
536-786 |
7.58e-06 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 49.74 E-value: 7.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 536 EKERQRLENLRRKEEAEQLRRQK--VEEDKRRRLEEVKLKRE---ERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKT 610
Cdd:pfam17380 347 ERELERIRQEERKRELERIRQEEiaMEISRMRELERLQMERQqknERVRQELEAARKVKILEEERQRKIQQQKVEMEQIR 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 611 EKAKEERlaeekakkkaaakkmeEVEARRKQEEEARRLrwlQQVRAQEEEERRHQELLqkkKEEEQERLRKAAEAKRLAE 690
Cdd:pfam17380 427 AEQEEAR----------------QREVRRLEEERAREM---ERVRLEEQERQQQVERL---RQQEEERKRKKLELEKEKR 484
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 691 QREQERREQERREQERREQERREQERREQERQLAeqerrreqerlqaERELQEREKALRLQKEQLQREleekKKKEEQQR 770
Cdd:pfam17380 485 DRKRAEEQRRKILEKELEERKQAMIEEERKRKLL-------------EKEMEERQKAIYEEERRREAE----EERRKQQE 547
|
250
....*....|....*.
gi 767968082 771 LAERQLQEEQEKKAKE 786
Cdd:pfam17380 548 MEERRRIQEQMRKATE 563
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
536-795 |
1.27e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 49.20 E-value: 1.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 536 EKERQRLENLRRKEE--AEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKA 613
Cdd:pfam02463 169 RKKKEALKKLIEETEnlAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRD 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 614 KEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLrwlqqvraqeeeERRHQELLQKKKEEEQERLRKAAEAKRLAEQRE 693
Cdd:pfam02463 249 EQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKL------------QEEELKLLAKEEEELKSELLKLERRKVDDEEKL 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 694 QERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAE 773
Cdd:pfam02463 317 KESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEE 396
|
250 260
....*....|....*....|..
gi 767968082 774 RQLQEEQEKKAKEAAGASKALN 795
Cdd:pfam02463 397 LELKSEEEKEAQLLLELARQLE 418
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
536-793 |
1.32e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 49.37 E-value: 1.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 536 EKERQRLENLRRKEEAEQLRRqkveEDKRRRLEEVKLKREERlRKVLQARERVEQMK----EEKKKQIEQKFAqiDEKTE 611
Cdd:PTZ00121 1353 EAAADEAEAAEEKAEAAEKKK----EEAKKKADAAKKKAEEK-KKADEAKKKAEEDKkkadELKKAAAAKKKA--DEAKK 1425
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 612 KAKEERlaeEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQvraqEEEERRHQELLQKKKEEEqerlRKAAEAKRLAEQ 691
Cdd:PTZ00121 1426 KAEEKK---KADEAKKKAEEAKKADEAKKKAEEAKKAEEAKK----KAEEAKKADEAKKKAEEA----KKADEAKKKAEE 1494
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 692 REQERREQERREQERREQERREQERREQERQLAEQERRREQErlQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRL 771
Cdd:PTZ00121 1495 AKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKA--DEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKA 1572
|
250 260
....*....|....*....|..
gi 767968082 772 AERqlQEEQEKKAKEAAGASKA 793
Cdd:PTZ00121 1573 EED--KNMALRKAEEAKKAEEA 1592
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
536-793 |
1.72e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.98 E-value: 1.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 536 EKERQRLENLRRKEEAeqlrRQKVEEdkRRRLEEVklKREERLRKVLQARERVEQMKEEKKKQIEQ-KFAQIDEKTEKAK 614
Cdd:PTZ00121 1105 KTETGKAEEARKAEEA----KKKAED--ARKAEEA--RKAEDARKAEEARKAEDAKRVEIARKAEDaRKAEEARKAEDAK 1176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 615 EERLAEEKAKKKAAAKKMEEVEARRKqeEEARR---LRWLQQVRaqeeeerrhqellQKKKEEEQERLRKAAEAKRLAEQ 691
Cdd:PTZ00121 1177 KAEAARKAEEVRKAEELRKAEDARKA--EAARKaeeERKAEEAR-------------KAEDAKKAEAVKKAEEAKKDAEE 1241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 692 REQERREQERREQERREQERREQERREQERQLAEQERRREQErlqaeRELQEREKALRLQKEQLQRELEEKKKKEEQQRL 771
Cdd:PTZ00121 1242 AKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADEL-----KKAEEKKKADEAKKAEEKKKADEAKKKAEEAKK 1316
|
250 260
....*....|....*....|..
gi 767968082 772 AERQLQEEQEKKAKEAAGASKA 793
Cdd:PTZ00121 1317 ADEAKKKAEEAKKKADAAKKKA 1338
|
|
| tolA |
PRK09510 |
cell envelope integrity inner membrane protein TolA; Provisional |
537-689 |
1.81e-05 |
|
cell envelope integrity inner membrane protein TolA; Provisional
Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 48.26 E-value: 1.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 537 KERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLrkvlQARERVEQMKEEKKKQIEQKFAQIDektekAKEE 616
Cdd:PRK09510 84 KEQQQAEELQQKQAAEQERLKQLEKERLAAQEQKKQAEEAAK----QAALKQKQAEEAAAKAAAAAKAKAE-----AEAK 154
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 767968082 617 RLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQVRAQEEEERRHQELLQKKKEEEQERLRKAAEAKRLA 689
Cdd:PRK09510 155 RAAAAAKKAAAEAKKKAEAEAAKKAAAEAKKKAEAEAAAKAAAEAKKKAEAEAKKKAAAEAKKKAAAEAKAAA 227
|
|
| DUF4670 |
pfam15709 |
Domain of unknown function (DUF4670); This family of proteins is found in eukaryotes. Proteins ... |
529-688 |
3.22e-05 |
|
Domain of unknown function (DUF4670); This family of proteins is found in eukaryotes. Proteins in this family are typically between 373 and 763 amino acids in length.
Pssm-ID: 464815 [Multi-domain] Cd Length: 522 Bit Score: 47.64 E-value: 3.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 529 DPKCSFVEKERQRLENLRR-KEEAEQLRRQKVEEDKRRRLEEVKLKREERlrkvlqarERVEQMKEEKKKQIEQKFAQID 607
Cdd:pfam15709 319 DPSKALLEKREQEKASRDRlRAERAEMRRLEVERKRREQEEQRRLQQEQL--------ERAEKMREELELEQQRRFEEIR 390
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 608 EKTEKAKEERLAEEKAKKKAAAKKMEEVE-ARRKQEEEARRLRWLQQVRAQEEEERRHQELLQKKKEE-----EQERLRK 681
Cdd:pfam15709 391 LRKQRLEEERQRQEEEERKQRLQLQAAQErARQQQEEFRRKLQELQRKKQQEEAERAEAEKQRQKELEmqlaeEQKRLME 470
|
....*..
gi 767968082 682 AAEAKRL 688
Cdd:pfam15709 471 MAEEERL 477
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
546-794 |
5.36e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 47.27 E-value: 5.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 546 RRKEEAEQLRRQKVEEDKRRRLEEvklKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKK 625
Cdd:pfam02463 154 RRLEIEEEAAGSRLKRKKKEALKK---LIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLD 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 626 KAAAKKMEEVEARRKQEEEARRLRWLQQVRAQEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQE 705
Cdd:pfam02463 231 YLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKV 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 706 RREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAK 785
Cdd:pfam02463 311 DDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAA 390
|
....*....
gi 767968082 786 EAAGASKAL 794
Cdd:pfam02463 391 KLKEEELEL 399
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
536-793 |
6.76e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.06 E-value: 6.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 536 EKERQRlENLRRKEEAEQL----RRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAqiDEKTE 611
Cdd:PTZ00121 1246 EEERNN-EEIRKFEEARMAhfarRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKA--DEAKK 1322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 612 KAKEERlaeekakKKAAAKKMEEVEARRKQE----EEARRLRWLQQVRAQEEEERRHQELLQKKKEE---EQERLRKAAE 684
Cdd:PTZ00121 1323 KAEEAK-------KKADAAKKKAEEAKKAAEaakaEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAakkKAEEKKKADE 1395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 685 AKRLAEQREQERRE-QERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKE-QLQRELEEK 762
Cdd:PTZ00121 1396 AKKKAEEDKKKADElKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKaEEAKKADEA 1475
|
250 260 270
....*....|....*....|....*....|...
gi 767968082 763 KKKEEQQRLAE--RQLQEEQEKKAKEAAGASKA 793
Cdd:PTZ00121 1476 KKKAEEAKKADeaKKKAEEAKKKADEAKKAAEA 1508
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
535-792 |
6.93e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.06 E-value: 6.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 535 VEKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKL---KREERLRKVLQARERVEQMKEEKKKQIEQkfAQIDEKTE 611
Cdd:PTZ00121 1111 AEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAedaKRVEIARKAEDARKAEEARKAEDAKKAEA--ARKAEEVR 1188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 612 KAKEERLAE--EKAKKKAAAKKMEEVEARRKQEEEAR--RLRWLQQVRAQEEEERRHQELLQKKKEEEQERLRKAAEAKR 687
Cdd:PTZ00121 1189 KAEELRKAEdaRKAEAARKAEEERKAEEARKAEDAKKaeAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARR 1268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 688 LAEQREQERREQERREQERREQERREQERREQERQLAeqerrreqerlQAERELQEREKALRLQK--EQLQRELEEKKKK 765
Cdd:PTZ00121 1269 QAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKAD-----------EAKKKAEEAKKADEAKKkaEEAKKKADAAKKK 1337
|
250 260
....*....|....*....|....*..
gi 767968082 766 EEQQRLAERQLQEEQEKKAKEAAGASK 792
Cdd:PTZ00121 1338 AEEAKKAAEAAKAEAEAAADEAEAAEE 1364
|
|
| tolA |
PRK09510 |
cell envelope integrity inner membrane protein TolA; Provisional |
546-689 |
1.28e-04 |
|
cell envelope integrity inner membrane protein TolA; Provisional
Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 45.57 E-value: 1.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 546 RRKEEaeqlRRQKVEEDKRRRLEEVKLKREERLRKVLQARErveQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKK 625
Cdd:PRK09510 75 KRAEE----QRKKKEQQQAEELQQKQAAEQERLKQLEKERL---AAQEQKKQAEEAAKQAALKQKQAEEAAAKAAAAAKA 147
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767968082 626 KAAAKKMEEVEARRKQEEEARRLRWLQQVRAQEEEERRHQELLQKKKEEEQERLRKAAEAKRLA 689
Cdd:PRK09510 148 KAEAEAKRAAAAAKKAAAEAKKKAEAEAAKKAAAEAKKKAEAEAAAKAAAEAKKKAEAEAKKKA 211
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
536-802 |
1.46e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 45.70 E-value: 1.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 536 EKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKE 615
Cdd:COG1196 374 LAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAE 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 616 ERLaeekakkkaaakkmEEVEARRKQEEEARRLRWLQQVRAQEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQE 695
Cdd:COG1196 454 LEE--------------EEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGL 519
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 696 RREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQ 775
Cdd:COG1196 520 RGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGA 599
|
250 260
....*....|....*....|....*..
gi 767968082 776 LQEEQEKKAKEAAGASKALNVTVDVQV 802
Cdd:COG1196 600 AVDLVASDLREADARYYVLGDTLLGRT 626
|
|
| PRK05035 |
PRK05035 |
electron transport complex protein RnfC; Provisional |
547-793 |
3.94e-04 |
|
electron transport complex protein RnfC; Provisional
Pssm-ID: 235334 [Multi-domain] Cd Length: 695 Bit Score: 44.17 E-value: 3.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 547 RKEEAEQLRRQKVE-EDKRRRLEEVKLKREERLRK------------VLQARERVEQMKEEKKKQIEQKFAQIDEKTEKA 613
Cdd:PRK05035 441 IEQEKKKAEEAKARfEARQARLEREKAAREARHKKaaearaakdkdaVAAALARVKAKKAAATQPIVIKAGARPDNSAVI 520
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 614 KEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQVRAQEEEERrhqellqkkKEEEQERLRKAAEAKRLAEQRE 693
Cdd:PRK05035 521 AAREARKAQARARQAEKQAAAAADPKKAAVAAAIARAKAKKAAQQAANA---------EAEEEVDPKKAAVAAAIARAKA 591
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 694 QERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKalrlqKEQLQRELEEKK-KKEEQQRLA 772
Cdd:PRK05035 592 KKAAQQAASAEPEEQVAEVDPKKAAVAAAIARAKAKKAEQQANAEPEEPVDPR-----KAAVAAAIARAKaRKAAQQQAN 666
|
250 260
....*....|....*....|.
gi 767968082 773 ERQLQEEQEKKAKEAAGASKA 793
Cdd:PRK05035 667 AEPEEAEDPKKAAVAAAIARA 687
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
527-788 |
5.75e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 43.89 E-value: 5.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 527 RMDPKCSFVEKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMK------EEKKKQIE 600
Cdd:TIGR02168 688 ELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSkeltelEAEIEELE 767
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 601 QKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLR--------WLQQVRAQEEEERRHQELLQKKK 672
Cdd:TIGR02168 768 ERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNeeaanlreRLESLERRIAATERRLEDLEEQI 847
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 673 EEEQERLRKAAEA-KRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKAL--- 748
Cdd:TIGR02168 848 EELSEDIESLAAEiEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLaql 927
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 767968082 749 RLQKEQLQRELeekkkKEEQQRLAERQLQEEQEKKAKEAA 788
Cdd:TIGR02168 928 ELRLEGLEVRI-----DNLQERLSEEYSLTLEEAEALENK 962
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
533-785 |
7.62e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 43.42 E-value: 7.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 533 SFVEKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEK--- 609
Cdd:pfam02463 747 EEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLieq 826
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 610 TEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQVRAQEEEERRHQELLQKK--KEEEQERLRKAAEAKR 687
Cdd:pfam02463 827 EEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELesKEEKEKEEKKELEEES 906
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 688 LAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLqaeRELQEREKALRLQKEQLQRE-----LEEK 762
Cdd:pfam02463 907 QKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENN---KEEEEERNKRLLLAKEELGKvnlmaIEEF 983
|
250 260
....*....|....*....|...
gi 767968082 763 KKKEEQQRLAERQLQEEQEKKAK 785
Cdd:pfam02463 984 EEKEERYNKDELEKERLEEEKKK 1006
|
|
| RNase_Y_N |
pfam12072 |
RNase Y N-terminal region; |
535-615 |
8.04e-04 |
|
RNase Y N-terminal region;
Pssm-ID: 463456 [Multi-domain] Cd Length: 201 Bit Score: 41.80 E-value: 8.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 535 VEKERQRLENLRR------KEEAEQLRRQKVEEDKRRR-----LEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKF 603
Cdd:pfam12072 40 IEEAKKEAETKKKealleaKEEIHKLRAEAERELKERRnelqrQERRLLQKEETLDRKDESLEKKEESLEKKEKELEAQQ 119
|
90
....*....|..
gi 767968082 604 AQIDEKTEKAKE 615
Cdd:pfam12072 120 QQLEEKEEELEE 131
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
536-684 |
8.48e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 43.13 E-value: 8.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 536 EKERQRLENLRRKEEAEQLRR----------QKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQ 605
Cdd:TIGR02169 332 DKLLAEIEELEREIEEERKRRdklteeyaelKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRL 411
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 606 IDEKTEkaKEERLAEEKAKKKAAAKKMEEVEARRKQ-EEEARRLRW-LQQVRAQEEEERRHQELLQKKKEEEQERLRKAA 683
Cdd:TIGR02169 412 QEELQR--LSEELADLNAAIAGIEAKINELEEEKEDkALEIKKQEWkLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQ 489
|
.
gi 767968082 684 E 684
Cdd:TIGR02169 490 R 490
|
|
| TPH |
pfam13868 |
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ... |
531-785 |
8.82e-04 |
|
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.
Pssm-ID: 464007 [Multi-domain] Cd Length: 341 Bit Score: 42.60 E-value: 8.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 531 KCSFVEKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKfaQIDEKT 610
Cdd:pfam13868 55 RALEEEEEKEEERKEERKRYRQELEEQIEEREQKRQEEYEEKLQEREQMDEIVERIQEEDQAEAEEKLEKQR--QLREEI 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 611 EKAKEERLAEEKakkkaaakkmeeVEARRKQEEEARRLRWLQQVRAQEEEERRHQELLQKKKEEEQERLRKAAEAKRlae 690
Cdd:pfam13868 133 DEFNEEQAEWKE------------LEKEEEREEDERILEYLKEKAEREEEREAEREEIEEEKEREIARLRAQQEKAQ--- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 691 qreqerREQERREQERREQERREQERREQERQLAEQERRR-EQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQ 769
Cdd:pfam13868 198 ------DEKAERDELRAKLYQEEQERKERQKEREEAEKKArQRQELQQAREEQIELKERRLAEEAEREEEEFERMLRKQA 271
|
250
....*....|....*.
gi 767968082 770 RLAERQLQEEQEKKAK 785
Cdd:pfam13868 272 EDEEIEQEEAEKRRMK 287
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
540-647 |
9.47e-04 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 42.89 E-value: 9.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 540 QRLENLRRkeEAEQlrrqkveedKRRRLEEvKLKREERLRKVLQAR-ERVEQMKEEKKKQIEQKFAQIdekTEKAKEERL 618
Cdd:PRK00409 523 ASLEELER--ELEQ---------KAEEAEA-LLKEAEKLKEELEEKkEKLQEEEDKLLEEAEKEAQQA---IKEAKKEAD 587
|
90 100
....*....|....*....|....*....
gi 767968082 619 AEEKAKKKAAAKKMEEVeaRRKQEEEARR 647
Cdd:PRK00409 588 EIIKELRQLQKGGYASV--KAHELIEARK 614
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
506-786 |
1.33e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 42.65 E-value: 1.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 506 MTPTSAPRSVMKSfiKRNTPLRMDPKCSFVEKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQAR 585
Cdd:pfam02463 650 KGVSLEEGLAEKS--EVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRV 727
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 586 ERVEQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQVRAQEEEERRHQ 665
Cdd:pfam02463 728 QEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALE 807
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 666 ELLQKKKE--EEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQE 743
Cdd:pfam02463 808 EELKEEAEllEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDE 887
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 767968082 744 REKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAKE 786
Cdd:pfam02463 888 LESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEIL 930
|
|
| ERM_helical |
pfam20492 |
Ezrin/radixin/moesin, alpha-helical domain; The ERM family consists of three closely-related ... |
541-649 |
1.41e-03 |
|
Ezrin/radixin/moesin, alpha-helical domain; The ERM family consists of three closely-related proteins, ezrin, radixin and moesin. Ezrin was first identified as a constituent of microvilli, radixin as a barbed, end-capping actin-modulating protein from isolated junctional fractions, and moesin as a heparin binding protein. A tumour suppressor molecule responsible for neurofibromatosis type 2 (NF2) is highly similar to ERM proteins and has been designated merlin (moesin-ezrin-radixin-like protein). ERM molecules contain 3 domains, an N-terminal globular domain, an extended alpha-helical domain and a charged C-terminal domain (pfam00769). Ezrin, radixin and merlin also contain a polyproline linker region between the helical and C-terminal domains. The N-terminal domain is highly conserved and is also found in merlin, band 4.1 proteins and members of the band 4.1 superfamily, designated the FERM domain. ERM proteins crosslink actin filaments with plasma membranes. They co-localize with CD44 at actin filament plasma membrane interaction sites, associating with CD44 via their N-terminal domains and with actin filaments via their C-terminal domains. This is the alpha-helical domain, which is involved in intramolecular masking of protein-protein interaction sites, regulating the activity of this proteins.
Pssm-ID: 466641 [Multi-domain] Cd Length: 120 Bit Score: 39.52 E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 541 RLENLRRKEEAEQLRRQKVEEDKR-----RRLEEVKLKREERLRKVLQARERVEQmkeeKKKQIEQKFAQIDEKTEKAKE 615
Cdd:pfam20492 1 REEAEREKQELEERLKQYEEETKKaqeelEESEETAEELEEERRQAEEEAERLEQ----KRQEAEEEKERLEESAEMEAE 76
|
90 100 110
....*....|....*....|....*....|....
gi 767968082 616 ERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLR 649
Cdd:pfam20492 77 EKEQLEAELAEAQEEIARLEEEVERKEEEARRLQ 110
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
549-686 |
1.73e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 42.07 E-value: 1.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 549 EEAEQLRRQKVEEDKRrrleEVKLKREErlrKVLQARERVEQMKEEKKKQIEQKFAQID--EKTEKAKEERLAEEKakkk 626
Cdd:PRK12704 34 KEAEEEAKRILEEAKK----EAEAIKKE---ALLEAKEEIHKLRNEFEKELRERRNELQklEKRLLQKEENLDRKL---- 102
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 767968082 627 aaakkmeevEARRKQEEEARRLRwlQQVRAQEEEERRHQELLQKKKEEEQERLRKAA-----EAK 686
Cdd:PRK12704 103 ---------ELLEKREEELEKKE--KELEQKQQELEKKEEELEELIEEQLQELERISgltaeEAK 156
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
141-287 |
1.84e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 42.00 E-value: 1.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 141 PSSPTPESPTMLTK---KPEDNHTQCQLVPVVEIGISERQNAEQHVTQLMSTEPLPRTLSPTPASATAPTSQ----GIPT 213
Cdd:PRK08691 380 PSAQTAEKETAAKKpqpRPEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQTAAGTAQtsakSIQT 459
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767968082 214 SDEESTPKK---SKARILESITVSSLMATPQDPKGQGVGTGRSASKLRIAQVSPG-PRDSPAFPDSPWRERVLAPILP 287
Cdd:PRK08691 460 ASEAETPPEnqvSKNKAADNETDAPLSEVPSENPIQATPNDEAVETETFAHEAPAePFYGYGFPDNDCPPEDGAEIPP 537
|
|
| tolA_full |
TIGR02794 |
TolA protein; TolA couples the inner membrane complex of itself with TolQ and TolR to the ... |
535-689 |
1.90e-03 |
|
TolA protein; TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]
Pssm-ID: 274303 [Multi-domain] Cd Length: 346 Bit Score: 41.37 E-value: 1.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 535 VEKERQRLENLRRKEEAEQ--LRRQKVEEDKRRRLEEVKLKR-EERLRKVLQARErveqmKEEKKKQIEQKFAQIDEKTE 611
Cdd:TIGR02794 52 ANRIQQQKKPAAKKEQERQkkLEQQAEEAEKQRAAEQARQKElEQRAAAEKAAKQ-----AEQAAKQAEEKQKQAEEAKA 126
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767968082 612 KAKEERlaEEKAKKKAAAKKMEevEARRKQEEEARRLRWLQQVRAQEEEERRHQELLQKKKEEEQERLRKAAEAKRLA 689
Cdd:TIGR02794 127 KQAAEA--KAKAEAEAERKAKE--EAAKQAEEEAKAKAAAEAKKKAEEAKKKAEAEAKAKAEAEAKAKAEEAKAKAEA 200
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
531-679 |
3.28e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 41.26 E-value: 3.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 531 KCSFVEKERQR--------LENLRR-KEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEK----KK 597
Cdd:pfam17380 403 KVKILEEERQRkiqqqkveMEQIRAeQEEARQREVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKleleKE 482
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 598 QIEQKFAQIDEKT--EKAKEERLAEEKAKKKAAAKKMEEVEARRKQ--EEEARRLRWLQQVRAQEEEERRHQELLQKKKE 673
Cdd:pfam17380 483 KRDRKRAEEQRRKilEKELEERKQAMIEEERKRKLLEKEMEERQKAiyEEERRREAEEERRKQQEMEERRRIQEQMRKAT 562
|
....*.
gi 767968082 674 EEQERL 679
Cdd:pfam17380 563 EERSRL 568
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
536-649 |
4.19e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 41.08 E-value: 4.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 536 EKERQRLENLRRKEEAEQLRRQKVEEdkRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKE 615
Cdd:COG1196 666 SRRELLAALLEAEAELEELAERLAEE--ELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLE 743
|
90 100 110
....*....|....*....|....*....|....
gi 767968082 616 ERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLR 649
Cdd:COG1196 744 EEELLEEEALEELPEPPDLEELERELERLEREIE 777
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
535-795 |
4.75e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 40.81 E-value: 4.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 535 VEKERQRLENLrrKEEAEQLRRQKVE-EDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKA 613
Cdd:TIGR02168 283 IEELQKELYAL--ANEISRLEQQKQIlRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAEL 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 614 KEERlaeEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQVRAQEEEERRHQELLQKKKE---EEQERLRKAAEAKRLAE 690
Cdd:TIGR02168 361 EELE---AELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRErlqQEIEELLKKLEEAELKE 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 691 QREQERREQERREQERreqerreqerreqerqlaeqerrreqerlQAERELQEREKALRLQKEQLQRELEEKKKKEEQQR 770
Cdd:TIGR02168 438 LQAELEELEEELEELQ-----------------------------EELERLEEALEELREELEEAEQALDAAERELAQLQ 488
|
250 260
....*....|....*....|....*
gi 767968082 771 LAERQLQEEQEKKAKEAAGASKALN 795
Cdd:TIGR02168 489 ARLDSLERLQENLEGFSEGVKALLK 513
|
|
| MAP7 |
pfam05672 |
MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is ... |
536-617 |
4.87e-03 |
|
MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is presumably controlled by tissue-specific microtubule-associated proteins (MAPs). The 115-kDa epithelial MAP (E-MAP-115/MAP7) has been identified as a microtubule-stabilising protein predominantly expressed in cell lines of epithelial origin. The binding of this microtubule associated protein is nucleotide independent.
Pssm-ID: 461709 [Multi-domain] Cd Length: 153 Bit Score: 38.48 E-value: 4.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 536 EKERQRLENLRRKEEAEQLRR----QKVEEDKRRRLEEVKLKREERLRKVLQaRERVEQMKEEKKKQIEQKFAQidEKTE 611
Cdd:pfam05672 39 EEERLRKEELRRRAEEERARReeeaRRLEEERRREEEERQRKAEEEAEEREQ-REQEEQERLQKQKEEAEAKAR--EEAE 115
|
....*.
gi 767968082 612 KAKEER 617
Cdd:pfam05672 116 RQRQER 121
|
|
| CCDC34 |
pfam13904 |
Coiled-coil domain-containing protein 3; This family is found in eukaryotes; it has several ... |
525-686 |
4.94e-03 |
|
Coiled-coil domain-containing protein 3; This family is found in eukaryotes; it has several conserved tryptophan residues. The function is not known.
Pssm-ID: 464032 [Multi-domain] Cd Length: 221 Bit Score: 39.69 E-value: 4.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 525 PLRMDPKCSFVEKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEE----VKLKREERLRKVL---QARERVEQMKEEKKK 597
Cdd:pfam13904 12 EKQPEEESSKHRVPSLSLDSSSQSSSLTYARKLEGLKLERQPLEAyenwLAAKQRQRQKELQaqkEEREKEEQEAELRKR 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 598 QIEQKFAQ-IDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRL--RWLQQVRAqeeeerrhqeLLQKKKEE 674
Cdd:pfam13904 92 LAKEKYQEwLQRKARQQTKKREESHKQKAAESASKSLAKPERKVSQEEAKEVlqEWERKKLE----------QQQRKREE 161
|
170
....*....|..
gi 767968082 675 EQERLRKAAEAK 686
Cdd:pfam13904 162 EQREQLKKEEEE 173
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
525-687 |
5.23e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 40.79 E-value: 5.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 525 PLRMDPKCSFVEKERQRLENLRRKEEAEQLRRQKVEEdKRRRLEEVKlKREERLRKVLQARERVEQMKEEKKKQIEQKFA 604
Cdd:PRK02224 460 PVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEE-RLERAEDLV-EAEDRIERLEERREDLEELIAERRETIEEKRE 537
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 605 QIDEKTEKA---------KEERLAEEKAKKKAAAKKMEEVEARRKQEEEAR-RLRWLQQVRAQEEEERRHQELLQKKKE- 673
Cdd:PRK02224 538 RAEELRERAaeleaeaeeKREAAAEAEEEAEEAREEVAELNSKLAELKERIeSLERIRTLLAAIADAEDEIERLREKREa 617
|
170 180
....*....|....*....|
gi 767968082 674 ------EEQERLRKAAEAKR 687
Cdd:PRK02224 618 laelndERRERLAEKRERKR 637
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
538-687 |
6.09e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 40.31 E-value: 6.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 538 ERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKEER 617
Cdd:COG1196 628 VAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEER 707
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 618 LAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQvRAQEEEERRHQELLQKKKEEEQERLRKAAEAKR 687
Cdd:COG1196 708 ELAEAEEERLEEELEEEALEEQLEAEREELLEELLE-EEELLEEEALEELPEPPDLEELERELERLEREI 776
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
142-513 |
6.27e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 40.28 E-value: 6.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 142 SSPTPE------SPTMLTKKPEDNHTqcqlvpvveigisERQNAEQHVTQLMSTEPLPRTLSPTPAsATAPTSQGIPTSD 215
Cdd:pfam05109 474 TSPTPAgttsgaSPVTPSPSPRDNGT-------------ESKAPDMTSPTSAVTTPTPNATSPTPA-VTTPTPNATSPTL 539
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 216 EESTPKKSKARILESITVSSLMATPQDPKGQGVGTGRSASKLRIAQVSPGPrDSPAFPDSPWRERVLAPILPDNFSTPTG 295
Cdd:pfam05109 540 GKTSPTSAVTTPTPNATSPTPAVTTPTPNATIPTLGKTSPTSAVTTPTPNA-TSPTVGETSPQANTTNHTLGGTSSTPVV 618
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 296 SrtdsQSVRHSPIAPSSPSPQVLAQKYSLVAKQESVVrraSRRLAKKTAEEPAASGRIICHSYLERLLNVEVPQKVGSEQ 375
Cdd:pfam05109 619 T----SPPKNATSAVTTGQHNITSSSTSSMSLRPSSI---SETLSPSTSDNSTSHMPLLTSAHPTGGENITQVTPASTST 691
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 376 KEPPEEAEPVAAAEPEVPENNGNNSWPHNDTEIANSTPNPKPAASSPETPSAGQQEAKTDQADGPREPPQSARRKRSYKQ 455
Cdd:pfam05109 692 HHVSTSSPAPRPGTTSQASGPGNSSTSTKPGEVNVTKGTPPKNATSPQAPSGQKTAVPTVTSTGGKANSTTGGKHTTGHG 771
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767968082 456 AVSELDEEQHLEDEElQPPRSK---TPSSPCPASKVVRPLRTFLH---TVQRNQMLMTPTSAPR 513
Cdd:pfam05109 772 ARTSTEPTTDYGGDS-TTPRTRynaTTYLPPSTSSKLRPRWTFTSppvTTAQATVPVPPTSQPR 834
|
|
| hsdR |
PRK11448 |
type I restriction enzyme EcoKI subunit R; Provisional |
534-617 |
6.54e-03 |
|
type I restriction enzyme EcoKI subunit R; Provisional
Pssm-ID: 236912 [Multi-domain] Cd Length: 1123 Bit Score: 40.32 E-value: 6.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 534 FVEKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLqarERVEQMKEEKKKQIEQKFAQIDEKTEKA 613
Cdd:PRK11448 134 FVPPEDPENLLHALQQEVLTLKQQLELQAREKAQSQALAEAQQQELVAL---EGLAAELEEKQQELEAQLEQLQEKAAET 210
|
....
gi 767968082 614 KEER 617
Cdd:PRK11448 211 SQER 214
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
536-788 |
6.68e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 40.31 E-value: 6.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 536 EKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKE---EKKKQIEQKFAQIDEKTEK 612
Cdd:COG1196 406 EEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLEllaELLEEAALLEAALAELLEE 485
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 613 AKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARR--------LRWLQQVRAQEEEERRHQELLQKKKEEEQERLRKAAE 684
Cdd:COG1196 486 LAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRglagavavLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEY 565
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 685 AKRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQER-------EKALRLQKEQLQR 757
Cdd:COG1196 566 LKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRtlvaarlEAALRRAVTLAGR 645
|
250 260 270
....*....|....*....|....*....|.
gi 767968082 758 ELEEKKKKEEQQRLAERQLQEEQEKKAKEAA 788
Cdd:COG1196 646 LREVTLEGEGGSAGGSLTGGSRRELLAALLE 676
|
|
| MAP7 |
pfam05672 |
MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is ... |
538-675 |
6.91e-03 |
|
MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is presumably controlled by tissue-specific microtubule-associated proteins (MAPs). The 115-kDa epithelial MAP (E-MAP-115/MAP7) has been identified as a microtubule-stabilising protein predominantly expressed in cell lines of epithelial origin. The binding of this microtubule associated protein is nucleotide independent.
Pssm-ID: 461709 [Multi-domain] Cd Length: 153 Bit Score: 38.10 E-value: 6.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 538 ERQRLENLRRKEEaEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKEER 617
Cdd:pfam05672 18 EKRRQAREQRERE-EQERLEKEEEERLRKEELRRRAEEERARREEEARRLEEERRREEEERQRKAEEEAEEREQREQEEQ 96
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 767968082 618 LAEEKAKKkaaakkmeevEARRKQEEEARRLRwlqQVRAQEEEERRHQELLQKKKEEE 675
Cdd:pfam05672 97 ERLQKQKE----------EAEAKAREEAERQR---QEREKIMQQEEQERLERKKRIEE 141
|
|
| YqiK |
COG2268 |
Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown]; |
542-689 |
9.67e-03 |
|
Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown];
Pssm-ID: 441869 [Multi-domain] Cd Length: 439 Bit Score: 39.47 E-value: 9.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 542 LENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKreerlrkvlqarervEQMKEEKKKQIEQKfaQIDEKTEKAKEERLAEE 621
Cdd:COG2268 186 LDALGRRKIAEIIRDARIAEAEAERETEIAIA---------------QANREAEEAELEQE--REIETARIAEAEAELAK 248
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 767968082 622 KAKKKAAAKKMEEVEARRK-QEEEARRLRWLQQvRAQEEEERRHQELLQKKKEEEQERL----RKAAEAKRLA 689
Cdd:COG2268 249 KKAEERREAETARAEAEAAyEIAEANAEREVQR-QLEIAEREREIELQEKEAEREEAELeadvRKPAEAEKQA 320
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
535-617 |
9.77e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 38.75 E-value: 9.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968082 535 VEKERQRLENLR--------RKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQI 606
Cdd:COG1579 75 IKKYEEQLGNVRnnkeyealQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAEL 154
|
90
....*....|.
gi 767968082 607 DEKTEKAKEER 617
Cdd:COG1579 155 EAELEELEAER 165
|
|
| |
