NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|767968169|ref|XP_011543330|]
View 

pecanex-like protein 3 isoform X8 [Homo sapiens]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
PHA03247 super family cl33720
large tegument protein UL36; Provisional
194-629 3.93e-07

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 54.94  E-value: 3.93e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  194 GDLPQTPPGAVPDPSLASTDSSEPSPLAGDGAPWSGSSMADTPMSPLLKGSLSQELSKSFLTLTQPDRALVRTSSRREQR 273
Cdd:PHA03247 2606 GDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRR 2685
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  274 RGA----GGYQPLDRRGSGEPTPQKAGSSDScfSGTDRETLSSFKSEKTNSTHLD----SPPGGPAPEGSDTDPPSEAeL 345
Cdd:PHA03247 2686 RAArptvGSLTSLADPPPPPPTPEPAPHALV--SATPLPPGPAAARQASPALPAApappAVPAGPATPGGPARPARPP-T 2762
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  346 PASPDAGVPSDDTlrsfdtvigAGTPPGLAEPLLVVRPKDLALLRPSKRQPPLRRHSPPGRAPRRPllegggffedEDTS 425
Cdd:PHA03247 2763 TAGPPAPAPPAAP---------AAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALP----------PAAS 2823
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  426 EGSELSPASSlrSQRRYSTDSSSSTSCYSPESSRGAAGGPRKRRAPHGAEEGTAVPPKRPYGTQRTPSTASAKTHARVLS 505
Cdd:PHA03247 2824 PAGPLPPPTS--AQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALP 2901
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  506 MDGAGgdvlRPPLAGCKAELEAQVGVEQAASEPVVLPAEAR-RGPAANQPGWRGELQEEGAVggaaeeTGRRDRSSSVRR 584
Cdd:PHA03247 2902 PDQPE----RPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRpQPPLAPTTDPAGAGEPSGAV------PQPWLGALVPGR 2971
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*
gi 767968169  585 TQAIRRRhnaGSNPTPPASVMGSPPSSLQEAQRGRAASHSRALTL 629
Cdd:PHA03247 2972 VAVPRFR---VPQPAPSREAPASSTPPLTGHSLSRVSSWASSLAL 3013
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
194-629 3.93e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 54.94  E-value: 3.93e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  194 GDLPQTPPGAVPDPSLASTDSSEPSPLAGDGAPWSGSSMADTPMSPLLKGSLSQELSKSFLTLTQPDRALVRTSSRREQR 273
Cdd:PHA03247 2606 GDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRR 2685
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  274 RGA----GGYQPLDRRGSGEPTPQKAGSSDScfSGTDRETLSSFKSEKTNSTHLD----SPPGGPAPEGSDTDPPSEAeL 345
Cdd:PHA03247 2686 RAArptvGSLTSLADPPPPPPTPEPAPHALV--SATPLPPGPAAARQASPALPAApappAVPAGPATPGGPARPARPP-T 2762
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  346 PASPDAGVPSDDTlrsfdtvigAGTPPGLAEPLLVVRPKDLALLRPSKRQPPLRRHSPPGRAPRRPllegggffedEDTS 425
Cdd:PHA03247 2763 TAGPPAPAPPAAP---------AAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALP----------PAAS 2823
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  426 EGSELSPASSlrSQRRYSTDSSSSTSCYSPESSRGAAGGPRKRRAPHGAEEGTAVPPKRPYGTQRTPSTASAKTHARVLS 505
Cdd:PHA03247 2824 PAGPLPPPTS--AQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALP 2901
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  506 MDGAGgdvlRPPLAGCKAELEAQVGVEQAASEPVVLPAEAR-RGPAANQPGWRGELQEEGAVggaaeeTGRRDRSSSVRR 584
Cdd:PHA03247 2902 PDQPE----RPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRpQPPLAPTTDPAGAGEPSGAV------PQPWLGALVPGR 2971
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*
gi 767968169  585 TQAIRRRhnaGSNPTPPASVMGSPPSSLQEAQRGRAASHSRALTL 629
Cdd:PHA03247 2972 VAVPRFR---VPQPAPSREAPASSTPPLTGHSLSRVSSWASSLAL 3013
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
194-629 3.93e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 54.94  E-value: 3.93e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  194 GDLPQTPPGAVPDPSLASTDSSEPSPLAGDGAPWSGSSMADTPMSPLLKGSLSQELSKSFLTLTQPDRALVRTSSRREQR 273
Cdd:PHA03247 2606 GDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRR 2685
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  274 RGA----GGYQPLDRRGSGEPTPQKAGSSDScfSGTDRETLSSFKSEKTNSTHLD----SPPGGPAPEGSDTDPPSEAeL 345
Cdd:PHA03247 2686 RAArptvGSLTSLADPPPPPPTPEPAPHALV--SATPLPPGPAAARQASPALPAApappAVPAGPATPGGPARPARPP-T 2762
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  346 PASPDAGVPSDDTlrsfdtvigAGTPPGLAEPLLVVRPKDLALLRPSKRQPPLRRHSPPGRAPRRPllegggffedEDTS 425
Cdd:PHA03247 2763 TAGPPAPAPPAAP---------AAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALP----------PAAS 2823
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  426 EGSELSPASSlrSQRRYSTDSSSSTSCYSPESSRGAAGGPRKRRAPHGAEEGTAVPPKRPYGTQRTPSTASAKTHARVLS 505
Cdd:PHA03247 2824 PAGPLPPPTS--AQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALP 2901
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  506 MDGAGgdvlRPPLAGCKAELEAQVGVEQAASEPVVLPAEAR-RGPAANQPGWRGELQEEGAVggaaeeTGRRDRSSSVRR 584
Cdd:PHA03247 2902 PDQPE----RPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRpQPPLAPTTDPAGAGEPSGAV------PQPWLGALVPGR 2971
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*
gi 767968169  585 TQAIRRRhnaGSNPTPPASVMGSPPSSLQEAQRGRAASHSRALTL 629
Cdd:PHA03247 2972 VAVPRFR---VPQPAPSREAPASSTPPLTGHSLSRVSSWASSLAL 3013
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
197-510 1.89e-05

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 49.01  E-value: 1.89e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  197 PQTPPGAVPDPSLAStDSSEPSPLAGDGAPWSGSSMADTPMSPLLKGSLSQELSKSFLTLTQPDRALVRTSSRREQRRGA 276
Cdd:PHA03307  118 PPTPPPASPPPSPAP-DLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPS 196
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  277 GGYQPLDRRGSGEPTPQKAGSSDSCFSGtDRETLSSFKSEKTNSTHLDSPPGGPAPEGSDTDP-PSEAELPASPDAGVPS 355
Cdd:PHA03307  197 TPPAAASPRPPRRSSPISASASSPAPAP-GRSAADDAGASSSDSSSSESSGCGWGPENECPLPrPAPITLPTRIWEASGW 275
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  356 DDTLRSFDTVIGAGTPPGlaepllvvrpkdlallrPSKRQPPLRRHSPPGRAPRRPLLEGGGffedeDTSEGSELSPASS 435
Cdd:PHA03307  276 NGPSSRPGPASSSSSPRE-----------------RSPSPSPSSPGSGPAPSSPRASSSSSS-----SRESSSSSTSSSS 333
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767968169  436 LRSQRRYSTDSSSSTSCYSPESSRGAAGGPRKRRAPHGAEEG--TAVPPKRPygtqrTPSTASAKTHARVLSMDGAG 510
Cdd:PHA03307  334 ESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPssPAASAGRP-----TRRRARAAVAGRARRRDATG 405
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
197-502 7.39e-05

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 47.09  E-value: 7.39e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  197 PQTPPGAVPDPSLASTDSSEPSPLAGDGAPWSGSSMADTPMSPLLKGSLSQELSKsfLTLTQPDRALVRTSSRREQRRGA 276
Cdd:PHA03307   72 PPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASP--PPSPAPDLSEMLRPVGSPGPPPA 149
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  277 GGYQPLDRRGSGEPTPQKAGSSDSCFSGTDRETLSSfKSEKTNSTHLDSPPGGPAPEGSDTDPPSEAELPASPDAGVPSD 356
Cdd:PHA03307  150 ASPPAAGASPAAVASDAASSRQAALPLSSPEETARA-PSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSA 228
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  357 DTLRSFDTVIGAGTP-PGLAEPLLVVRPKDLALLRPSKRQPplRRHSPPGRAPRRPLLEGGGFFEDEDTSEGSELSPASS 435
Cdd:PHA03307  229 ADDAGASSSDSSSSEsSGCGWGPENECPLPRPAPITLPTRI--WEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSG 306
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767968169  436 LRSQRRYSTDSSSSTSCYSPESSRGAAGGPRKRRAPHGAEEGTAVPPKRPYGTQRTPSTASAKTHAR 502
Cdd:PHA03307  307 PAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSR 373
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
197-438 2.63e-04

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 45.55  E-value: 2.63e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  197 PQTPPGAVPDPSLASTDSSEPSPLAGDGAPWSGSSMADTPMSPLLKGSLSqelsksfltltqpdralvrtSSRREQRRGA 276
Cdd:PHA03307  189 PPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSD--------------------SSSSESSGCG 248
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  277 GGyqPLDRRGSGEPTPQKA-GSSDSCFSGTDRETLSSFKSEKTNSTHLDSPPGGPAPEGSDTDPPSEAELPASPDAGVPS 355
Cdd:PHA03307  249 WG--PENECPLPRPAPITLpTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSS 326
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  356 DDTLRSFDTVIGAGTPPG--LAEPLLVVRPKD-LALLRPSKRQPPLRRHSPPGRAPRRPLLEGGGFFEDEDT--SEGSEL 430
Cdd:PHA03307  327 SSTSSSSESSRGAAVSPGpsPSRSPSPSRPPPpADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRArrRDATGR 406

                  ....*...
gi 767968169  431 SPASSLRS 438
Cdd:PHA03307  407 FPAGRPRP 414
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
286-626 3.41e-04

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 45.16  E-value: 3.41e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  286 GSGEPTPQKAGSSDSCFSGTDRETLS---SFKSEKTNSTHLDSPPGGPAPEGSDTDPPSE-AELPASPDAGVPSDDTLRS 361
Cdd:PHA03307   74 GPGTEAPANESRSTPTWSLSTLAPASparEGSPTPPGPSSPDPPPPTPPPASPPPSPAPDlSEMLRPVGSPGPPPAASPP 153
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  362 FDTVIGAGTPPGLAEPLLVVRPkdLALLRPSKRQPPLRRHSPPGRAPRrPLLEGGGFFEDEDTSEGSELSPASSLRSQRR 441
Cdd:PHA03307  154 AAGASPAAVASDAASSRQAALP--LSSPEETARAPSSPPAEPPPSTPP-AAASPRPPRRSSPISASASSPAPAPGRSAAD 230
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  442 YSTDSSSSTSCYSP----ESSRGAAGGPRKRRAPHGAEEGTAVPPKRP---YGTQRTPSTASAKTHARVLSMDGAGGDVL 514
Cdd:PHA03307  231 DAGASSSDSSSSESsgcgWGPENECPLPRPAPITLPTRIWEASGWNGPssrPGPASSSSSPRERSPSPSPSSPGSGPAPS 310
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  515 RPPLAGckaeleaqvgvEQAASEPVVLPAEARRGPAANQPGWRGelqeegavGGAAEETGRRDRSSSVRRTQAIRRRHNA 594
Cdd:PHA03307  311 SPRASS-----------SSSSSRESSSSSTSSSSESSRGAAVSP--------GPSPSRSPSPSRPPPPADPSSPRKRPRP 371
                         330       340       350
                  ....*....|....*....|....*....|..
gi 767968169  595 GSNPTPPASVMGSPPSSLQEAQRGRAASHSRA 626
Cdd:PHA03307  372 SRAPSSPAASAGRPTRRRARAAVAGRARRRDA 403
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
194-608 9.90e-04

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 43.62  E-value: 9.90e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  194 GDLPQTPPGAVPDPSLASTDSSEPSPLAGDGAPWSGSSMADTPMSPLLKGSLSQELSKSFLTLTQPDRALVRT--SSRRE 271
Cdd:PHA03307   17 GGEFFPRPPATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTwsLSTLA 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  272 QRRGAGGYQPLDRRGSGEPTPQKAGSSDSCFSGTDRETLSSFKSEKTnsthLDSPPGGPAPEGSDTDPPSEAELPASPDA 351
Cdd:PHA03307   97 PASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGS----PGPPPAASPPAAGASPAAVASDAASSRQA 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  352 GVPSDDTLRSFDTVIGAGTPPGLAEPLLVVRPKDLALLRPSKRQPPLRRHSPP--GRAPRRPLLEGGGFFEDEDTSEGSE 429
Cdd:PHA03307  173 ALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGrsAADDAGASSSDSSSSESSGCGWGPE 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  430 ------LSPASSLRSQRRYSTDSSSSTSCYSPESSRGAAGGPRKRRAPHGAEEGTAVPPKRPYGTQ-RTPSTASAKTHAR 502
Cdd:PHA03307  253 necplpRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSsSSRESSSSSTSSS 332
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  503 VLSMDGAGGDVLRPPlagckaeleAQVGVEQAASEPVVLPAEARRGPAANQPGW------RGELQEEG-AVGGAA---EE 572
Cdd:PHA03307  333 SESSRGAAVSPGPSP---------SRSPSPSRPPPPADPSSPRKRPRPSRAPSSpaasagRPTRRRARaAVAGRArrrDA 403
                         410       420       430
                  ....*....|....*....|....*....|....*.
gi 767968169  573 TGRRDRSSSVRRTQAIRRRHNAGSNPTPPASVMGSP 608
Cdd:PHA03307  404 TGRFPAGRPRPSPLDAGAASGAFYARYPLLTPSGEP 439
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
288-632 1.55e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 42.85  E-value: 1.55e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  288 GEPTPQKAGSSDSCFSGTDRETLSSFKSEKTNSTHLDSPPGGPAPEGSDTDPPSEAELPASPDAGVPSD----------D 357
Cdd:PHA03307   65 FEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDlsemlrpvgsP 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  358 TLRSFDTVIGAGTPPGlAEPLLVVRPKDLALL----RPSKRQPPLRRHSPPGRAPrRPLLEGGGFFEDEDTSEGSELSPA 433
Cdd:PHA03307  145 GPPPAASPPAAGASPA-AVASDAASSRQAALPlsspEETARAPSSPPAEPPPSTP-PAAASPRPPRRSSPISASASSPAP 222
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  434 SSLRSQRRystdsssstscySPESSRGAAGGPRKRRAPHGAEEGTAVPPKRPYGTQRTPSTASaktharvlsmdgagGDV 513
Cdd:PHA03307  223 APGRSAAD------------DAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEAS--------------GWN 276
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  514 LRPPLAGCKAELEAqvgveQAASEPVVLPAEARRGPAANQPgwRGELQEEGAVGGAAEETGRRDRSSSVRRTQAIRRRHN 593
Cdd:PHA03307  277 GPSSRPGPASSSSS-----PRERSPSPSPSSPGSGPAPSSP--RASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSR 349
                         330       340       350
                  ....*....|....*....|....*....|....*....
gi 767968169  594 AGSNPTPPASvmgSPPSSLQEAQRGRAASHSRALTLPSA 632
Cdd:PHA03307  350 SPSPSRPPPP---ADPSSPRKRPRPSRAPSSPAASAGRP 385
PHA03247 PHA03247
large tegument protein UL36; Provisional
200-646 5.31e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 41.08  E-value: 5.31e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  200 PPGAvPDPSLASTDSSEPSP-LAGDGAPWSGSSMADTPMspLLKGSLSQELSKSFLTltqpdralvrtssrREQRRGAGG 278
Cdd:PHA03247 2417 PPGP-PDVRFVGSEEIEELPfVSPGGDVLAGLAADGDPF--FARTILGAPFSLSLLL--------------GELFPGAPV 2479
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  279 YQ-PLDRRGSGEPTPqkagSSDSCFSGTDRETLSSFKSEKTNSTHLDSPPGGPAP-----------------EGSDTDPP 340
Cdd:PHA03247 2480 YRrPAEARFPFAAGA----APDPGGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHprmltwirgleelasddAGDPPPPL 2555
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  341 SEAELPASPDAGVP-SDDTLRSFDTVIGA-----GTPPGLAEPLLVVRPKDLALLRPSKRQPPLRRHSP----PGRAPRR 410
Cdd:PHA03247 2556 PPAAPPAAPDRSVPpPRPAPRPSEPAVTSrarrpDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPdpppPSPSPAA 2635
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  411 PLLEGGGFFEDEDTSEGSELSPASSLRSQRRYSTDSSSSTSCYSPESSRgaaggPRKRRAPHGAEEGTAVPPKRPYGTQR 490
Cdd:PHA03247 2636 NEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPR-----RRAARPTVGSLTSLADPPPPPPTPEP 2710
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767968169  491 TPSTASAKTHArVLSMDGAGGDVLRPPLAGckaeleaqvgVEQAASEPVVLPAEARRGPAANQPGwrgelqeegavggaa 570
Cdd:PHA03247 2711 APHALVSATPL-PPGPAAARQASPALPAAP----------APPAVPAGPATPGGPARPARPPTTA--------------- 2764
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 767968169  571 eetgrrdrsssvrrtqairrrhnAGSNPTPPASVMGSPPSSLQEAQRGRAASHSRALTLPSALHFASSLLLTRAGA 646
Cdd:PHA03247 2765 -----------------------GPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAA 2817
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH