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Conserved domains on  [gi|1034593453|ref|XP_016878377|]
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proline-rich transmembrane protein 2 isoform X3 [Homo sapiens]

Protein Classification

CD225/dispanin family protein( domain architecture ID 10517436)

CD225/dispanin family protein similar to Homo sapiens tumor suppressor candidate 5 (TUSC5), which may be involved in fat metabolism, and synapse differentiation-inducing gene protein 1 (SynDIG1), which may regulate AMPA receptor content at nascent synapses and have a role in postsynaptic development and maturation. CD225 is an interferon-inducible transmembrane protein associated with interferon induced cell growth suppression

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CD225 pfam04505
Interferon-induced transmembrane protein; This family includes the human leukocyte antigen ...
 264-330 1.20e-28

Interferon-induced transmembrane protein; This family includes the human leukocyte antigen CD225, which is an interferon inducible transmembrane protein, and is associated with interferon induced cell growth suppression.


:

Pssm-ID: 461336  Cd Length: 68  Bit Score: 105.66  E-value: 1.20e-28
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1034593453 264 KPRDYIILAILSCFCPMWPVNIVAFAYAVMSRNSLQQGDVDGAQRLGRVAKLLSIVALVGGVLIIIA 330
Cdd:pfam04505   1 PPPDYLVWSIFSTLCCCLPLGIVAIVYSVKVRDRKAAGDYEGAQRASRTAKCLNIIALVLGLVVIIL 67
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 25-216 5.46e-05

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 45.31  E-value: 5.46e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453   25 PGHSEAETGPPQVLAGVPDQPEAPQPGPNTtAAPVDSGPKAGLAPETTETPA------GASETAQATDLSLSPGGESKAN 98
Cdd:PHA03247  2787 AVASLSESRESLPSPWDPADPPAAVLAPAA-ALPPAASPAGPLPPPTSAQPTapppppGPPPPSLPLGGSVAPGGDVRRR 2865

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453   99 CSPEDPCQE--TVSKPEVSKEATADQGSRLESAAPPEPAPE------PAPQPDPRPDSQPTPKPALQPELPTQEDPTPEI 170
Cdd:PHA03247  2866 PPSRSPAAKpaAPARPPVRRLARPAVSRSTESFALPPDQPErppqpqAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAP 2945

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*...
gi 1034593453  171 LSESVGEKQENGAVVPLQAGDGEEG--PAPEPHSPPSKKSPPANGAPP 216
Cdd:PHA03247  2946 TTDPAGAGEPSGAVPQPWLGALVPGrvAVPRFRVPQPAPSREAPASST 2993
 
Name Accession Description Interval E-value
CD225 pfam04505
Interferon-induced transmembrane protein; This family includes the human leukocyte antigen ...
 264-330 1.20e-28

Interferon-induced transmembrane protein; This family includes the human leukocyte antigen CD225, which is an interferon inducible transmembrane protein, and is associated with interferon induced cell growth suppression.


Pssm-ID: 461336  Cd Length: 68  Bit Score: 105.66  E-value: 1.20e-28
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1034593453 264 KPRDYIILAILSCFCPMWPVNIVAFAYAVMSRNSLQQGDVDGAQRLGRVAKLLSIVALVGGVLIIIA 330
Cdd:pfam04505   1 PPPDYLVWSIFSTLCCCLPLGIVAIVYSVKVRDRKAAGDYEGAQRASRTAKCLNIIALVLGLVVIIL 67
PHA03247 PHA03247
large tegument protein UL36; Provisional
 25-216 5.46e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 45.31  E-value: 5.46e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453   25 PGHSEAETGPPQVLAGVPDQPEAPQPGPNTtAAPVDSGPKAGLAPETTETPA------GASETAQATDLSLSPGGESKAN 98
Cdd:PHA03247  2787 AVASLSESRESLPSPWDPADPPAAVLAPAA-ALPPAASPAGPLPPPTSAQPTapppppGPPPPSLPLGGSVAPGGDVRRR 2865

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453   99 CSPEDPCQE--TVSKPEVSKEATADQGSRLESAAPPEPAPE------PAPQPDPRPDSQPTPKPALQPELPTQEDPTPEI 170
Cdd:PHA03247  2866 PPSRSPAAKpaAPARPPVRRLARPAVSRSTESFALPPDQPErppqpqAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAP 2945

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*...
gi 1034593453  171 LSESVGEKQENGAVVPLQAGDGEEG--PAPEPHSPPSKKSPPANGAPP 216
Cdd:PHA03247  2946 TTDPAGAGEPSGAVPQPWLGALVPGrvAVPRFRVPQPAPSREAPASST 2993
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 16-212 1.92e-03

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 40.28  E-value: 1.92e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453  16 ESPKVPGEGPGHSEAETGPPQVLAGVPDQPEAPqpgpNTTAAPVDSGPKAGLAPETTETPAGASETAQATDLSLSP---G 92
Cdd:pfam05109 423 KAPESTTTSPTLNTTGFAAPNTTTGLPSSTHVP----TNLTAPASTGPTVSTADVTSPTPAGTTSGASPVTPSPSPrdnG 498

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453  93 GESKAncspedpcQETVSKPEVSKEATADQGSRLESAAPPEPAPEPAPQPDPRPDSQ-PTPKPALQPELPTQEDPTPEIL 171
Cdd:pfam05109 499 TESKA--------PDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAvTTPTPNATSPTPAVTTPTPNAT 570

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1034593453 172 SESVGEKQENGAVVPlqagdgeegPAPEPHSPP-SKKSPPAN 212
Cdd:pfam05109 571 IPTLGKTSPTSAVTT---------PTPNATSPTvGETSPQAN 603
 
Name Accession Description Interval E-value
CD225 pfam04505
Interferon-induced transmembrane protein; This family includes the human leukocyte antigen ...
 264-330 1.20e-28

Interferon-induced transmembrane protein; This family includes the human leukocyte antigen CD225, which is an interferon inducible transmembrane protein, and is associated with interferon induced cell growth suppression.


Pssm-ID: 461336  Cd Length: 68  Bit Score: 105.66  E-value: 1.20e-28
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1034593453 264 KPRDYIILAILSCFCPMWPVNIVAFAYAVMSRNSLQQGDVDGAQRLGRVAKLLSIVALVGGVLIIIA 330
Cdd:pfam04505   1 PPPDYLVWSIFSTLCCCLPLGIVAIVYSVKVRDRKAAGDYEGAQRASRTAKCLNIIALVLGLVVIIL 67
PHA03247 PHA03247
large tegument protein UL36; Provisional
 25-216 5.46e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 45.31  E-value: 5.46e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453   25 PGHSEAETGPPQVLAGVPDQPEAPQPGPNTtAAPVDSGPKAGLAPETTETPA------GASETAQATDLSLSPGGESKAN 98
Cdd:PHA03247  2787 AVASLSESRESLPSPWDPADPPAAVLAPAA-ALPPAASPAGPLPPPTSAQPTapppppGPPPPSLPLGGSVAPGGDVRRR 2865

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453   99 CSPEDPCQE--TVSKPEVSKEATADQGSRLESAAPPEPAPE------PAPQPDPRPDSQPTPKPALQPELPTQEDPTPEI 170
Cdd:PHA03247  2866 PPSRSPAAKpaAPARPPVRRLARPAVSRSTESFALPPDQPErppqpqAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAP 2945

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*...
gi 1034593453  171 LSESVGEKQENGAVVPLQAGDGEEG--PAPEPHSPPSKKSPPANGAPP 216
Cdd:PHA03247  2946 TTDPAGAGEPSGAVPQPWLGALVPGrvAVPRFRVPQPAPSREAPASST 2993
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 29-218 1.01e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 44.21  E-value: 1.01e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453  29 EAETGPPQVLAGVPDQPEAPQPGPNTTAAPvdsgPKAGLAPETTETPAGASETAQatdlslsPGGESKANCSPEDPCQET 108
Cdd:PRK07764  585 EAVVGPAPGAAGGEGPPAPASSGPPEEAAR----PAAPAAPAAPAAPAPAGAAAA-------PAEASAAPAPGVAAPEHH 653

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453 109 VSKPEVSKEATADQGSRLESAAPPEPAPEPAPQPDPRPDSQPTPKPALQPELPTQEDPTPEILSESVGEKQENGAVVPLQ 188
Cdd:PRK07764  654 PKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSP 733

                         170       180       190
                  ....*....|....*....|....*....|
gi 1034593453 189 AGDGEEGPAPEPHSPPSKKSPPANGAPPRV 218
Cdd:PRK07764  734 AADDPVPLPPEPDDPPDPAGAPAQPPPPPA 763
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 20-216 4.91e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.90  E-value: 4.91e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453  20 VPGEGPGHSEAETGPPQVLAGVPDQPE-APQPGPNTTAAPVDSGPKAGLAPETTETPAGASETAQATDLSLSPGGESKAN 98
Cdd:PRK07764  588 VGPAPGAAGGEGPPAPASSGPPEEAARpAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGD 667

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453  99 CSPEDPCQETVSKPEVSKEATADQGSRLESAAPPEPAPEPAPQPDPRPDSQPTPKPALQPELPTQEDPTPEILSESVGEK 178
Cdd:PRK07764  668 GWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDD 747

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1034593453 179 QENGAVVPLQAGDGEEGPAPEPHSPPSKKSPPANGAPP 216
Cdd:PRK07764  748 PPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEM 785
PHA03247 PHA03247
large tegument protein UL36; Provisional
 20-247 1.25e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 40.69  E-value: 1.25e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453   20 VPGEGPGHSEAETGPPQVLAGVPDQPEAPQPG-PNTTAAPVDSGPKAGLA----------PETTETPAGASETAQATDLS 88
Cdd:PHA03247   254 APAPPPVVGEGADRAPETARGATGPPPPPEAAaPNGAAAPPDGVWGAALAgaplalpappDPPPPAPAGDAEEEDDEDGA 333

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453   89 L---SPGGESKANCS------------PEDPCQETVSKPEVSKEATADQGSRLESAAPPEPAPEPAPQPDPRPDSQPTPK 153
Cdd:PHA03247   334 MevvSPLPRPRQHYPlgfpkrrrptwtPPSSLEDLSAGRHHPKRASLPTRKRRSARHAATPFARGPGGDDQTRPAAPVPA 413

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453  154 PAlqpelptqedPTPEILSESVGEKQENGAVVPLQAGDGEEGPAPEPH-SPPSKKSPPANGAPPRVLQQLVEEDRMRRAH 232
Cdd:PHA03247   414 SV----------PTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPErQPPAPATEPAPDDPDDATRKALDALRERRPP 483

                          250
                   ....*....|....*
gi 1034593453  233 SGHPGSPRGSLSRHP 247
Cdd:PHA03247   484 EPPGADLAELLGRHP 498
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 16-212 1.92e-03

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 40.28  E-value: 1.92e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453  16 ESPKVPGEGPGHSEAETGPPQVLAGVPDQPEAPqpgpNTTAAPVDSGPKAGLAPETTETPAGASETAQATDLSLSP---G 92
Cdd:pfam05109 423 KAPESTTTSPTLNTTGFAAPNTTTGLPSSTHVP----TNLTAPASTGPTVSTADVTSPTPAGTTSGASPVTPSPSPrdnG 498

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453  93 GESKAncspedpcQETVSKPEVSKEATADQGSRLESAAPPEPAPEPAPQPDPRPDSQ-PTPKPALQPELPTQEDPTPEIL 171
Cdd:pfam05109 499 TESKA--------PDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAvTTPTPNATSPTPAVTTPTPNAT 570

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1034593453 172 SESVGEKQENGAVVPlqagdgeegPAPEPHSPP-SKKSPPAN 212
Cdd:pfam05109 571 IPTLGKTSPTSAVTT---------PTPNATSPTvGETSPQAN 603
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
25-239 3.03e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 39.47  E-value: 3.03e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453  25 PGHSEAETGPPQVLAG-VPDQPEAPQPGPNTTAAPVDSGPKAGLAPEttetPAGASETAQATDLSLSPGGESKANCSPED 103
Cdd:PRK12323  365 PGQSGGGAGPATAAAApVAQPAPAAAAPAAAAPAPAAPPAAPAAAPA----AAAAARAVAAAPARRSPAPEALAAARQAS 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453 104 PCQETVSKPEVSKEATADQGSrlESAAPPEPAPEPAPQPDPRPDSQPTPKPALQPELPTQEDPTPEILSESVGEKQENGA 183
Cdd:PRK12323  441 ARGPGGAPAPAPAPAAAPAAA--ARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAP 518

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1034593453 184 VVPLQAGDGEEGPAPEPHSPPSKKSPPANGAPPRVLQQLVEEDRMRRAHSGHPGSP 239
Cdd:PRK12323  519 AGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLP 574
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 17-125 4.44e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 38.81  E-value: 4.44e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453  17 SPKVPGEGPGHSEAETGPPQVLAGVPDQPEAPQPGPNTTAAPVDSGPKAGLAPETTETPAGASETAQATDLSLSPGGESK 96
Cdd:PRK07764  404 AAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPA 483

                          90       100
                  ....*....|....*....|....*....
gi 1034593453  97 ANCSPEDPcqetvSKPEVSKEATADQGSR 125
Cdd:PRK07764  484 PPAAPAPA-----AAPAAPAAPAAPAGAD 507
PRK13700 PRK13700
conjugal transfer protein TraD; Provisional
 1-80 5.45e-03

conjugal transfer protein TraD; Provisional


Pssm-ID: 184256 [Multi-domain]  Cd Length: 732  Bit Score: 38.79  E-value: 5.45e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453   1 MAASSSEISEMKGVEEsPKVPGEGPGHSEAETGPPQvLAGVPDQPEAPQPgPNTTAAPVDSGPKAGLAPettETPAGASE 80
Cdd:PRK13700  589 LAAREAEGRQMASLFE-PDVPEVASGEDVTQAEQPQ-QPQQPQQPQQPQQ-PQQPVSPVINDKKSDAGV---NVPAGGIE 662
PHA03247 PHA03247
large tegument protein UL36; Provisional
 3-256 5.71e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 38.77  E-value: 5.71e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453    3 ASSSEISEMKGVEESPKVPGEGPGHSEAetgPPQV-------LAGVPDQPEAPQPGPNTTAAPVDSGPKAGLA-PETTET 74
Cdd:PHA03247  2630 SPSPAANEPDPHPPPTVPPPERPRDDPA---PGRVsrprrarRLGRAAQASSPPQRPRRRAARPTVGSLTSLAdPPPPPP 2706

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453   75 PAGASETAQATDLSLSPGGESKANCSPEDPCqeTVSKPEVSKEATADQGSRLESAAPPEPAPEPAPQPDPRPDSQP--TP 152
Cdd:PHA03247  2707 TPEPAPHALVSATPLPPGPAAARQASPALPA--APAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPrrLT 2784

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453  153 KPALQPELPTQED-PTPEILSESVGEKQENGAVVPLQAGDGEEGPAPEPHSPPSKKSPPANGAPPRVLQQLVEE--DRMR 229
Cdd:PHA03247  2785 RPAVASLSESRESlPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPggDVRR 2864

                          250       260
                   ....*....|....*....|....*..
gi 1034593453  230 RAHSGHPGSPRGSLSRHPSSQLAGPGV 256
Cdd:PHA03247  2865 RPPSRSPAAKPAAPARPPVRRLARPAV 2891
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 46-203 8.19e-03

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 38.04  E-value: 8.19e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453  46 EAPQPGPNTTAAPVDSGPKAGLAPETTETPAGASETAQATDLSLSPGGESKANCSP---EDPCQETVSKPEVSKEATADQ 122
Cdd:PRK13108  294 EALEREPAELAAAAVASAASAVGPVGPGEPNQPDDVAEAVKAEVAEVTDEVAAESVvqvADRDGESTPAVEETSEADIER 373

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593453 123 GSRLESAAPPEPAPEPAPQPDPRPDSQPTPKPALQPELPTQEDPTPEILSESVGEKQENGAvvplqagdgeEGPAPEPHS 202
Cdd:PRK13108  374 EQPGDLAGQAPAAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAV----------AGPGDDPAE 443


                  .
gi 1034593453 203 P 203
Cdd:PRK13108  444 P 444
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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