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Conserved domains on  [gi|1034593700|ref|XP_016878448|]
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proline-rich protein 35 isoform X1 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
zf-C2H2_7 super family cl21122
Zinc-finger; this is a family of eukaryotic zinc-fingers.
 17-70 2.88e-31

Zinc-finger; this is a family of eukaryotic zinc-fingers.


The actual alignment was detected with superfamily member pfam15269:

Pssm-ID: 259402  Cd Length: 54  Bit Score: 115.12  E-value: 2.88e-31
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1034593700  17 RSRKPKKPHYIPRPWGKPYNYKCFQCPFTCLEKSHLYNHMKYSLCKDSLSLLLD 70
Cdd:pfam15269   1 KERKPKKPHYIPRPPGKPFKYKCFQCPFTCMEKSHLFNHMKYNLCKNSISLLIE 54
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 71-509 3.42e-07

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 53.79  E-value: 3.42e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700   71 SPDWACRRGSTTPRPHAPT-------PDRPGESDPGRQPQGARPTGAAPAPDlvvadihslhcGGGPKSRAKGSPGPPPP 143
Cdd:PHA03247  2563 APDRSVPPPRPAPRPSEPAvtsrarrPDAPPQSARPRAPVDDRGDPRGPAPP-----------SPLPPDTHAPDPPPPSP 2631

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  144 VARATRKGPGPSGLLPESWKPGMGGDPRGVGAGDMASAGPEGSVPCYPPPAPGEfPEAHSLHLSLLGVNYPLSPGLFSYL 223
Cdd:PHA03247  2632 SPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRR-RAARPTVGSLTSLADPPPPPPTPEP 2710

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  224 GPslaaaahvPFLASASPLLPPATAFPAVQPPQRPTPAPRlyyplllehtlGLPAGKAALA--KAPVSPRSPSGTPAPGL 301
Cdd:PHA03247  2711 AP--------HALVSATPLPPGPAAARQASPALPAAPAPP-----------AVPAGPATPGgpARPARPPTTAGPPAPAP 2771

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  302 LKVPVpglGPWPRVTPRDPGQEGELERAAQSDPRRRLSLGSRLELPKASPSLTRFCSRSSLPTGSSVMLWPEDGDPGGPE 381
Cdd:PHA03247  2772 PAAPA---AGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPP 2848

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  382 TPGPEGPL----------PLQPRGPVPGSPEHV-GEDLTRALGDYARVEQRLGQLGPAGGLAPRPLREQLGKIRLELLTI 450
Cdd:PHA03247  2849 SLPLGGSVapggdvrrrpPSRSPAAKPAAPARPpVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQ 2928

                          410       420       430       440       450
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1034593700  451 HQALEQAVRPPDAPLDLSVKRAPAKGPQALGEAwgrPELGPVLTGGTPEPPGMLGPAAP 509
Cdd:PHA03247  2929 PQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQ---PWLGALVPGRVAVPRFRVPQPAP 2984
 
Name Accession Description Interval E-value
zf-C2H2_7 pfam15269
Zinc-finger; this is a family of eukaryotic zinc-fingers.
 17-70 2.88e-31

Zinc-finger; this is a family of eukaryotic zinc-fingers.


Pssm-ID: 259402  Cd Length: 54  Bit Score: 115.12  E-value: 2.88e-31
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1034593700  17 RSRKPKKPHYIPRPWGKPYNYKCFQCPFTCLEKSHLYNHMKYSLCKDSLSLLLD 70
Cdd:pfam15269   1 KERKPKKPHYIPRPPGKPFKYKCFQCPFTCMEKSHLFNHMKYNLCKNSISLLIE 54
PHA03247 PHA03247
large tegument protein UL36; Provisional
 71-509 3.42e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 53.79  E-value: 3.42e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700   71 SPDWACRRGSTTPRPHAPT-------PDRPGESDPGRQPQGARPTGAAPAPDlvvadihslhcGGGPKSRAKGSPGPPPP 143
Cdd:PHA03247  2563 APDRSVPPPRPAPRPSEPAvtsrarrPDAPPQSARPRAPVDDRGDPRGPAPP-----------SPLPPDTHAPDPPPPSP 2631

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  144 VARATRKGPGPSGLLPESWKPGMGGDPRGVGAGDMASAGPEGSVPCYPPPAPGEfPEAHSLHLSLLGVNYPLSPGLFSYL 223
Cdd:PHA03247  2632 SPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRR-RAARPTVGSLTSLADPPPPPPTPEP 2710

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  224 GPslaaaahvPFLASASPLLPPATAFPAVQPPQRPTPAPRlyyplllehtlGLPAGKAALA--KAPVSPRSPSGTPAPGL 301
Cdd:PHA03247  2711 AP--------HALVSATPLPPGPAAARQASPALPAAPAPP-----------AVPAGPATPGgpARPARPPTTAGPPAPAP 2771

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  302 LKVPVpglGPWPRVTPRDPGQEGELERAAQSDPRRRLSLGSRLELPKASPSLTRFCSRSSLPTGSSVMLWPEDGDPGGPE 381
Cdd:PHA03247  2772 PAAPA---AGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPP 2848

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  382 TPGPEGPL----------PLQPRGPVPGSPEHV-GEDLTRALGDYARVEQRLGQLGPAGGLAPRPLREQLGKIRLELLTI 450
Cdd:PHA03247  2849 SLPLGGSVapggdvrrrpPSRSPAAKPAAPARPpVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQ 2928

                          410       420       430       440       450
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1034593700  451 HQALEQAVRPPDAPLDLSVKRAPAKGPQALGEAwgrPELGPVLTGGTPEPPGMLGPAAP 509
Cdd:PHA03247  2929 PQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQ---PWLGALVPGRVAVPRFRVPQPAP 2984
 
Name Accession Description Interval E-value
zf-C2H2_7 pfam15269
Zinc-finger; this is a family of eukaryotic zinc-fingers.
 17-70 2.88e-31

Zinc-finger; this is a family of eukaryotic zinc-fingers.


Pssm-ID: 259402  Cd Length: 54  Bit Score: 115.12  E-value: 2.88e-31
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1034593700  17 RSRKPKKPHYIPRPWGKPYNYKCFQCPFTCLEKSHLYNHMKYSLCKDSLSLLLD 70
Cdd:pfam15269   1 KERKPKKPHYIPRPPGKPFKYKCFQCPFTCMEKSHLFNHMKYNLCKNSISLLIE 54
PHA03247 PHA03247
large tegument protein UL36; Provisional
 71-509 3.42e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 53.79  E-value: 3.42e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700   71 SPDWACRRGSTTPRPHAPT-------PDRPGESDPGRQPQGARPTGAAPAPDlvvadihslhcGGGPKSRAKGSPGPPPP 143
Cdd:PHA03247  2563 APDRSVPPPRPAPRPSEPAvtsrarrPDAPPQSARPRAPVDDRGDPRGPAPP-----------SPLPPDTHAPDPPPPSP 2631

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  144 VARATRKGPGPSGLLPESWKPGMGGDPRGVGAGDMASAGPEGSVPCYPPPAPGEfPEAHSLHLSLLGVNYPLSPGLFSYL 223
Cdd:PHA03247  2632 SPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRR-RAARPTVGSLTSLADPPPPPPTPEP 2710

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  224 GPslaaaahvPFLASASPLLPPATAFPAVQPPQRPTPAPRlyyplllehtlGLPAGKAALA--KAPVSPRSPSGTPAPGL 301
Cdd:PHA03247  2711 AP--------HALVSATPLPPGPAAARQASPALPAAPAPP-----------AVPAGPATPGgpARPARPPTTAGPPAPAP 2771

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  302 LKVPVpglGPWPRVTPRDPGQEGELERAAQSDPRRRLSLGSRLELPKASPSLTRFCSRSSLPTGSSVMLWPEDGDPGGPE 381
Cdd:PHA03247  2772 PAAPA---AGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPP 2848

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  382 TPGPEGPL----------PLQPRGPVPGSPEHV-GEDLTRALGDYARVEQRLGQLGPAGGLAPRPLREQLGKIRLELLTI 450
Cdd:PHA03247  2849 SLPLGGSVapggdvrrrpPSRSPAAKPAAPARPpVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQ 2928

                          410       420       430       440       450
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1034593700  451 HQALEQAVRPPDAPLDLSVKRAPAKGPQALGEAwgrPELGPVLTGGTPEPPGMLGPAAP 509
Cdd:PHA03247  2929 PQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQ---PWLGALVPGRVAVPRFRVPQPAP 2984
PHA03247 PHA03247
large tegument protein UL36; Provisional
 78-544 6.16e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 49.55  E-value: 6.16e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700   78 RGSTTPRPHAPTPDRPGESDPGRQPQGARPTGAAPAPdlvvadihslhCGGGPKSRAKGSPGPPPPVARATRKG-PGPSG 156
Cdd:PHA03247  2609 RGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPT-----------VPPPERPRDDPAPGRVSRPRRARRLGrAAQAS 2677

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  157 LLPESWKPGMGGDPrgvgAGDMASAGPEGSVPCYPPPAPGEFPEAHSLHLSLLGVNYPLSPGLFSYLGPSLAAAAHVPfL 236
Cdd:PHA03247  2678 SPPQRPRRRAARPT----VGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATP-G 2752

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  237 ASASPLLPPATAFP-AVQPPQRP--TPAPRLYYPLLLEHTLGLPAGKAALAKAPVSPRSPSGTPAPGLLKVPVPGLGPWP 313
Cdd:PHA03247  2753 GPARPARPPTTAGPpAPAPPAAPaaGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPT 2832

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  314 RVTPRDPGQEGELER---------AAQSDPRRRLSLGSRLELPKASPSL-TRFCSRSSLPTGSSVMLWPEDGDPGGPETP 383
Cdd:PHA03247  2833 SAQPTAPPPPPGPPPpslplggsvAPGGDVRRRPPSRSPAAKPAAPARPpVRRLARPAVSRSTESFALPPDQPERPPQPQ 2912

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  384 GPEGPLPlQPRGPVPGSPEHVGEDLTRALGDYARVEQRLGQLGPAGGlAPRPLREQLGKIRLELLTIHQALEQAVRPPDA 463
Cdd:PHA03247  2913 APPPPQP-QPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGA-VPQPWLGALVPGRVAVPRFRVPQPAPSREAPA 2990

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  464 PLDLSVKRAPAKGPQALGEAWG---RPELGPVLTGGTPEPPGML-GPAAPQPFSGHTTKCEA---DSSVPPPGLPLAAPD 536
Cdd:PHA03247  2991 SSTPPLTGHSLSRVSSWASSLAlheETDPPPVSLKQTLWPPDDTeDSDADSLFDSDSERSDLealDPLPPEPHDPFAHEP 3070


                   ....*...
gi 1034593700  537 DPVIPGSG 544
Cdd:PHA03247  3071 DPATPEAG 3078
PHA03247 PHA03247
large tegument protein UL36; Provisional
 85-525 1.20e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 48.40  E-value: 1.20e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700   85 PHAPTPDRPGES----------DPGRQPQ---GARPTGAAPAPDL-------------VVADIHSLH------CGGGPKS 132
Cdd:PHA03247  2475 PGAPVYRRPAEArfpfaagaapDPGGGGPpdpDAPPAPSRLAPAIlpdepvgepvhprMLTWIRGLEelasddAGDPPPP 2554

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  133 RAKGSPGPPP----PVARATRKGPGPS--------GLLPESWKPGMGGDPRGVGAGDMASAGPEGSVPCYPPPAPGEFPE 200
Cdd:PHA03247  2555 LPPAAPPAAPdrsvPPPRPAPRPSEPAvtsrarrpDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPA 2634

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  201 AHSLHLSLLGVNYPLSPGLFSYLGPSL-----AAAAHVPFLASASPLLPPATAFP---------AVQPPQRPTPAPRLyy 266
Cdd:PHA03247  2635 ANEPDPHPPPTVPPPERPRDDPAPGRVsrprrARRLGRAAQASSPPQRPRRRAARptvgsltslADPPPPPPTPEPAP-- 2712

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  267 PLLLEHTLGLPAGKAALAKAPVSPRSPSGTPAPGLLKVPV-PGLGPWPRVTPRDPGQEGELERAAQSDPRRRLSLGSRLE 345
Cdd:PHA03247  2713 HALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGgPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLS 2792

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  346 LPKASPSLTRFCSRSSLPTGSSVMLWPEDGDPGGPETPgPEGPLPLQPRGPVPGSPEhvgedlTRALGDYARVEQRLGQL 425
Cdd:PHA03247  2793 ESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPP-PTSAQPTAPPPPPGPPPP------SLPLGGSVAPGGDVRRR 2865

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  426 GPAGGLAPRPLREQLGKI-RLELLTIHQALEQAVRPPDAPldlsvkrAPAKGPQALGEAWGRPELGPVLTGGTPEPPGML 504
Cdd:PHA03247  2866 PPSRSPAAKPAAPARPPVrRLARPAVSRSTESFALPPDQP-------ERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPR 2938

                          490       500
                   ....*....|....*....|.
gi 1034593700  505 GPAAPQPFSGHTTKCEADSSV 525
Cdd:PHA03247  2939 PQPPLAPTTDPAGAGEPSGAV 2959
PHA03247 PHA03247
large tegument protein UL36; Provisional
 80-400 5.52e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 43.00  E-value: 5.52e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700   80 STTPRPHAPTPDRPGESDPGRQPQGARPTGAAPAPDLVVADIHSLHCGGGPKSRAKGSPGPPPPVARATRKgPGPSGLLP 159
Cdd:PHA03247  2769 PAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAP-PPPPGPPP 2847

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  160 ESWKPGMGGDPrgvgAGDMASAGPEGSVPCYPP----------PAPGEFPEAHSLHLSLLGVNYPLSPGLFSY-LGPSLA 228
Cdd:PHA03247  2848 PSLPLGGSVAP----GGDVRRRPPSRSPAAKPAaparppvrrlARPAVSRSTESFALPPDQPERPPQPQAPPPpQPQPQP 2923

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  229 AAAHVPFLASASPLLPPATAFPAVQPPQRPTPAPRLYYPLLLEHTLGLPAGKAALAKAPVSPRSPSGTPAPGLLKVPVPG 308
Cdd:PHA03247  2924 PPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSR 3003

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  309 LGPWPrvtprdpgqeGELERAAQSDPrRRLSLGSRLELPKASPSLTRFCSRSSLPTGSSV-MLWPEDGDPGGPETPGPEG 387
Cdd:PHA03247  3004 VSSWA----------SSLALHEETDP-PPVSLKQTLWPPDDTEDSDADSLFDSDSERSDLeALDPLPPEPHDPFAHEPDP 3072

                          330
                   ....*....|...
gi 1034593700  388 PLPLQPRGPVPGS 400
Cdd:PHA03247  3073 ATPEAGARESPSS 3085
PHA03378 PHA03378
EBNA-3B; Provisional
 79-299 8.42e-04

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 42.36  E-value: 8.42e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  79 GSTTPRPHAPTPDRPGESDPGRQPQGARPTGAAPAPDLVVADIHSLHCGGGPKSRAKGSPGPPPPVARATRKGPGPSGLL 158
Cdd:PHA03378  692 GTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAP 771

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700 159 -------PESWKPGMGGDPRGVGAGDMASAGPEGSVPCYPPPAPGE-FPEAHSLHLSLLGVNYPLSPGL-FSYLGPSLAA 229
Cdd:PHA03378  772 gaptpqpPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLMPRAAPGQqGPTKQILRQLLTGGVKRGRPSLkKPAALERQAA 851

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700 230 AAHVP--------FLASASPLLPPA-------------TAFPAVQPPQRPTPAPRLYYPLLLEHTLGLPAGKAALAKAPV 288
Cdd:PHA03378  852 AGPTPspgsgtsdKIVQAPVFYPPVlqpiqvmrqlgsvRAAAASTVTQAPTEYTGERRGVGPMHPTDIPPSKRAKTDAYV 931

                         250
                  ....*....|.
gi 1034593700 289 SPRSPSGTPAP 299
Cdd:PHA03378  932 ESQPPHGGQSH 942
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
82-263 8.96e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 42.17  E-value: 8.96e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  82 TPRPHAPTPDRPGESDPGRQPQGARPTGAAPAPDLVVADIHSLHCGGGPKSRAKGSPgPPPPVARATRKGPGPSGllpes 161
Cdd:PRK12323  398 APAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAP-AAAPAAAARPAAAGPRP----- 471

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700 162 wkpgmGGDPRGVGAGDMASAGPEGSVPCYPPP---APGEFPEAHslhlslLGVNYPLSPGLFSYLGPSLAAAAHVPFLAS 238
Cdd:PRK12323  472 -----VAAAAAAAPARAAPAAAPAPADDDPPPweeLPPEFASPA------PAQPDAAPAGWVAESIPDPATADPDDAFET 540

                         170       180
                  ....*....|....*....|....*
gi 1034593700 239 ASPlLPPATAFPAVQPPQRPTPAPR 263
Cdd:PRK12323  541 LAP-APAAAPAPRAAAATEPVVAPR 564
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
71-293 1.22e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 41.76  E-value: 1.22e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  71 SPDWACRRGSTTPRPHAPTPDRPGESDPGRQPQGARPTGAAPAPDLVVADIHSLHCGGGPKSRAKGSPGPPPPVARATRK 150
Cdd:PRK07003  411 APKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAF 490

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700 151 GPGPSGLLPESWKPGMGGDPRGVGAGDMAS--AGPEGSVPCYPPPAPGEFPEAHSLHLSLLGVNYPLSPGLFSYLGPSLA 228
Cdd:PRK07003  491 EPAPRAAAPSAATPAAVPDARAPAAASREDapAAAAPPAPEARPPTPAAAAPAARAGGAAAALDVLRNAGMRVSSDRGAR 570

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1034593700 229 AAAhvpflASASPLLPPATAFPAVQPPQRPTPAPRLyyPLLLEHTLGLPAGKAALAKAPVSPRSP 293
Cdd:PRK07003  571 AAA-----AAKPAAAPAAAPKPAAPRVAVQVPTPRA--RAATGDAPPNGAARAEQAAESRGAPPP 628
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 139-337 2.44e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 40.74  E-value: 2.44e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700 139 GPPPPVARATRKGPGPSGLLPESWKPGMGGDPRGVGAGDMASAGPEGSVPCYPPPAPGEFPEAHSLHLSLLGVNYPLSPG 218
Cdd:PRK07764  590 PAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGW 669

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700 219 LFSYLGPSLAAAAHVPFLASASPLLPPATAFPAVQPPQRPTPAPRlyyplllehtlglPAGKAALAKAPVSPRSPSGTPA 298
Cdd:PRK07764  670 PAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQA-------------DDPAAQPPQAAQGASAPSPAAD 736

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1034593700 299 PGLLKVPVPGLGPWPRVTPRDPGQEGELERAAQSDPRRR 337
Cdd:PRK07764  737 DPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPP 775
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
98-322 3.28e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 40.24  E-value: 3.28e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  98 PGRQPQGARPTGAAPAPdlvVADIHSLHCGGGPKSRAKGSPGPPPPVARATRKGPGPSGLLPESWKPGMGGDPRGVGAGD 177
Cdd:PRK12323  365 PGQSGGGAGPATAAAAP---VAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASA 441

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700 178 MASAGPEGSVPCYPP-PAPGEFPEAHSlhlsllgvnyPLSPGLFSYLGPSLAAAAHVPflASASPLLPPATAFPAVQPPQ 256
Cdd:PRK12323  442 RGPGGAPAPAPAPAAaPAAAARPAAAG----------PRPVAAAAAAAPARAAPAAAP--APADDDPPPWEELPPEFASP 509

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1034593700 257 RPTPAPRLYYPLLLEhtlGLPAGKAALAKAPVSPRSPSGTPAPgllkVPVPGLGPWPRVTPRDPGQ 322
Cdd:PRK12323  510 APAQPDAAPAGWVAE---SIPDPATADPDDAFETLAPAPAAAP----APRAAAATEPVVAPRPPRA 568
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 244-402 3.44e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 40.35  E-value: 3.44e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700 244 PPATAFPAVQPPQRPTPAPRLYYPLLLEHTLGLPAGKAALAKAPVSPRSPSGTPAPGLLKVPVPGLGPWPRVTPRDPGQE 323
Cdd:PRK07764  615 PAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPA 694

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1034593700 324 GELERAAQSDPRRRLSLGSRLELPKASPSLTRFCSRSSLPTGSSVMLWPEDGDPGGPETPGPEGPLPLQPRGPVPGSPE 402
Cdd:PRK07764  695 GAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAA 773
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 73-293 5.10e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 39.97  E-value: 5.10e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700  73 DWACRRGSTTPRPHAPTPDRPGESDPGRQPQGARPTGAAPAPDLVVAdihslHCGGGPksrakGSPGPPPPVARATRKGP 152
Cdd:PRK07764  581 DWQVEAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAP-----APAGAA-----AAPAEASAAPAPGVAAP 650

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034593700 153 GPSGLLPESWKPGMGGDPRGVGAGDMASAGPEGSVPCYPPPAPGEFPEAHSLHlsllgvnyplSPGLFSYLGPSLAAAAH 232
Cdd:PRK07764  651 EHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAP----------APAATPPAGQADDPAAQ 720

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1034593700 233 VPfLASASPLLPPATAFPAVQPPQRPTPAPRLY-YPLLLEHTLGLPAGKAALAKAPVSPRSP 293
Cdd:PRK07764  721 PP-QAAQGASAPSPAADDPVPLPPEPDDPPDPAgAPAQPPPPPAPAPAAAPAAAPPPSPPSE 781
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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