|
Name |
Accession |
Description |
Interval |
E-value |
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
47-281 |
1.50e-36 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 140.09 E-value: 1.50e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 47 KSDERLLQAVENNDAPRVAALIARKGLVPTKLDPEGKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYG 126
Cdd:COG0666 52 ALGALLLLAAALAGDLLVALLLLAAGADINAKDDGGNTLLHAAARNGDLEIVKLLLEAGADVNARDKDGETPLHLAAYNG 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 127 HPQCLKQLLQASCVVDVVDSSGWTALHHAetgshcvgpAAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMCHTDLC 206
Cdd:COG0666 132 NLEIVKLLLEAGADVNAQDNDGNTPLHLA---------AANGNLEIVKLLLEAGADVNARDNDGETPLHLAAENGHLEIV 202
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1034606659 207 RLLLQQGAAANDQDLQGRTALMLACEGASPETVEVLLQGGAQPGITDALGQDAAHYGALAGDKLILHLLQEAAQR 281
Cdd:COG0666 203 KLLLEAGADVNAKDNDGKTALDLAAENGNLEIVKLLLEAGADLNAKDKDGLTALLLAAAAGAALIVKLLLLALLL 277
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
47-302 |
1.46e-34 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 134.31 E-value: 1.46e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 47 KSDERLLQAVENNDAPRVAALIARKGLVPTKLDPEGKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYG 126
Cdd:COG0666 19 LLLALLLLAAALLLLLLLLLLLLLALLALALADALGALLLLAAALAGDLLVALLLLAAGADINAKDDGGNTLLHAAARNG 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 127 HPQCLKQLLQASCVVDVVDSSGWTALHHAetgshcvgpAAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMCHTDLC 206
Cdd:COG0666 99 DLEIVKLLLEAGADVNARDKDGETPLHLA---------AYNGNLEIVKLLLEAGADVNAQDNDGNTPLHLAAANGNLEIV 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 207 RLLLQQGAAANDQDLQGRTALMLACEGASPETVEVLLQGGAQPGITDALGQDAAHYGALAGDKLILHLLQEAAQRPSPPS 286
Cdd:COG0666 170 KLLLEAGADVNARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDNDGKTALDLAAENGNLEIVKLLLEAGADLNAKD 249
|
250
....*....|....*.
gi 1034606659 287 ALTEDDSGEASSQNSM 302
Cdd:COG0666 250 KDGLTALLLAAAAGAA 265
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
52-260 |
4.65e-28 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 115.44 E-value: 4.65e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 52 LLQAVENNDAPRVAALIArKGLVPTKLDPEGKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYGHPQCL 131
Cdd:COG0666 91 LHAAARNGDLEIVKLLLE-AGADVNARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTPLHLAAANGNLEIV 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 132 KQLLQASCVVDVVDSSGWTALHHAetgshcvgpAAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMCHTDLCRLLLQ 211
Cdd:COG0666 170 KLLLEAGADVNARDNDGETPLHLA---------AENGHLEIVKLLLEAGADVNAKDNDGKTALDLAAENGNLEIVKLLLE 240
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1034606659 212 QGAAANDQDLQGRTALMLACEGASPETVEVLLQGGAQPGITDALGQDAA 260
Cdd:COG0666 241 AGADLNAKDKDGLTALLLAAAAGAALIVKLLLLALLLLAAALLDLLTLL 289
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
64-278 |
8.59e-25 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 105.81 E-value: 8.59e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 64 VAALIARKGLVPTKLDPEGKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYGHPQCLKQLLQASCVVDV 143
Cdd:COG0666 3 LLLLLLLLLLAALLLLLLLALLLLAAALLLLLLLLLLLLLALLALALADALGALLLLAAALAGDLLVALLLLAAGADINA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 144 VDSSGWTALHHAetgshcvgpAAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMCHTDLCRLLLQQGAAANDQDLQG 223
Cdd:COG0666 83 KDDGGNTLLHAA---------ARNGDLEIVKLLLEAGADVNARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDG 153
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1034606659 224 RTALMLACEGASPETVEVLLQGGAQPGITDALGQDAAHYGALAGDKLILHLLQEA 278
Cdd:COG0666 154 NTPLHLAAANGNLEIVKLLLEAGADVNARDNDGETPLHLAAENGHLEIVKLLLEA 208
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
432-1174 |
3.80e-22 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 103.60 E-value: 3.80e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 432 SSLHILERQVQELQQLLVERQEEKESLGREVESLQSRLSLLENERENtsydvttLQDEEGELpdlpGAEVLLSRQLSPSA 511
Cdd:TIGR02168 267 EKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLAN-------LERQLEEL----EAQLEELESKLDEL 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 512 QEHLASLQEQVAVLTRQNQELMEKvqiLENFEKDETQME--VEALAEVIplalyDSLRAEFDQLRRQHAEA---LQALRQ 586
Cdd:TIGR02168 336 AEELAELEEKLEELKEELESLEAE---LEELEAELEELEsrLEELEEQL-----ETLRSKVAQLELQIASLnneIERLEA 407
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 587 QETR-EVPREEGAACGESEVAGATATKNGPTHMELNGSvapetkvngAETIDEEAAGDETMEARTMEAEATGAEATgaEA 665
Cdd:TIGR02168 408 RLERlEDRRERLQQEIEELLKKLEEAELKELQAELEEL---------EEELEELQEELERLEEALEELREELEEAE--QA 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 666 TGAKVTETKPTGAEVREMETTEEeaNMETKPTG-AQATDTETTGVEAMGVEATKTKAE---EAEMQAYGVGAGQAepPVT 741
Cdd:TIGR02168 477 LDAAERELAQLQARLDSLERLQE--NLEGFSEGvKALLKNQSGLSGILGVLSELISVDegyEAAIEAALGGRLQA--VVV 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 742 GTTNM---------EATGSRATGMESTGVSATGVENPGVEAtVPGISAGPILHPGAAEASEKLQVELETRIRG------L 806
Cdd:TIGR02168 553 ENLNAakkaiaflkQNELGRVTFLPLDSIKGTEIQGNDREI-LKNIEGFLGVAKDLVKFDPKLRKALSYLLGGvlvvddL 631
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 807 EEALRQREREAAAELE-----AALGKC-----EAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAREDLRDRD 876
Cdd:TIGR02168 632 DNALELAKKLRPGYRIvtldgDLVRPGgvitgGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELE 711
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 877 SRLRELEAAsacLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAE 956
Cdd:TIGR02168 712 EELEQLRKE---LEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELE 788
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 957 ARVAELPAACEEARQGLAELREasealrqsvvpasEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERERvcsv 1036
Cdd:TIGR02168 789 AQIEQLKEELKALREALDELRA-------------ELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELS---- 851
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1037 alsehERIVGtLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQS 1116
Cdd:TIGR02168 852 -----EDIES-LAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLA 925
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*...
gi 1034606659 1117 RAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALRDQVKDLQQQLQE 1174
Cdd:TIGR02168 926 QLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKE 983
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
867-1204 |
9.54e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 98.86 E-value: 9.54e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 867 QAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAA 946
Cdd:COG1196 219 KEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELA 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 947 ELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVvpASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRA 1026
Cdd:COG1196 299 RLEQDIARLEERRRELEERLEELEEELAELEEELEELEEEL--EELEEELEEAEEELEEAEAELAEAEEALLEAEAELAE 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1027 ELERERVCSVALSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRT 1106
Cdd:COG1196 377 AEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEE 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1107 EAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALRDQVKDLQQQLQEAARDHSSVVALY 1186
Cdd:COG1196 457 EEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAY 536
|
330
....*....|....*...
gi 1034606659 1187 RSHLLYAIQGQMDEDVQR 1204
Cdd:COG1196 537 EAALEAALAAALQNIVVE 554
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
865-1193 |
5.53e-18 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 90.00 E-value: 5.53e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 865 LEQAREDL---RDR----DSRLRELE----------AASACLDEARASRLLAEeeARGLRAELAQREEARLEQSRELEVL 927
Cdd:COG1196 181 LEATEENLerlEDIlgelERQLEPLErqaekaeryrELKEELKELEAELLLLK--LRELEAELEELEAELEELEAELEEL 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 928 REQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQsvvpasEHRRLQEEALELRGRA 1007
Cdd:COG1196 259 EAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEE------RLEELEEELAELEEEL 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1008 ASLEQEVVATGKEAARLRAELErervcsvalseherivgTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSER 1087
Cdd:COG1196 333 EELEEELEELEEELEEAEEELE-----------------EAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAA 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1088 HAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALR----- 1162
Cdd:COG1196 396 AELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEeaall 475
|
330 340 350
....*....|....*....|....*....|..
gi 1034606659 1163 -DQVKDLQQQLQEAARDHSSVVALYRSHLLYA 1193
Cdd:COG1196 476 eAALAELLEELAEAAARLLLLLEAEADYEGFL 507
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
911-1175 |
2.10e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 88.19 E-value: 2.10e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 911 AQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQsvvpa 990
Cdd:TIGR02168 666 AKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEA----- 740
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 991 sEHRRLQEealelrgRAASLEQEVVATGKEAARLRAELERERVcsvALSEHERIVGTLQANVAQLEGQLEELGRRHEKTS 1070
Cdd:TIGR02168 741 -EVEQLEE-------RIAQLSKELTELEAEIEELEERLEEAEE---ELAEAEAEIEELEAQIEQLKEELKALREALDELR 809
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1071 AEVFQVQREAL-------FMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLK 1143
Cdd:TIGR02168 810 AELTLLNEEAAnlrerleSLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEAL 889
|
250 260 270
....*....|....*....|....*....|..
gi 1034606659 1144 EALKEQPAALATpEVEALRDQVKDLQQQLQEA 1175
Cdd:TIGR02168 890 ALLRSELEELSE-ELRELESKRSELRRELEEL 920
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
832-1171 |
2.59e-16 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 84.32 E-value: 2.59e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 832 EAEAGRLRERVREAEGSGASGGGGGDTTQL----RAALEQAREDLRDRDSRLRELeaasacLDEARASRLLAEEEARGLR 907
Cdd:PRK02224 275 EELAEEVRDLRERLEELEEERDDLLAEAGLddadAEAVEARREELEDRDEELRDR------LEECRVAAQAHNEEAESLR 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 908 AELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSV 987
Cdd:PRK02224 349 EDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELRERE 428
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 988 VPASEHRRLQEEALElrgraasleqevvatgkEAARLRAE----------LERERVCsvALSEHERIVGTLQANVAQLEG 1057
Cdd:PRK02224 429 AELEATLRTARERVE-----------------EAEALLEAgkcpecgqpvEGSPHVE--TIEEDRERVEELEAELEDLEE 489
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1058 QLEELGRRHEKTSAEVfQVQREALFMKSERHAAEAQLATAE-------QQLRGLRTEA-----------ERARQAQSRAQ 1119
Cdd:PRK02224 490 EVEEVEERLERAEDLV-EAEDRIERLEERREDLEELIAERRetieekrERAEELRERAaeleaeaeekrEAAAEAEEEAE 568
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1034606659 1120 EALDKAKEKDKKITELSKEVFNLkEALKEQPAALA--TPEVEALRDQVKDLQQQ 1171
Cdd:PRK02224 569 EAREEVAELNSKLAELKERIESL-ERIRTLLAAIAdaEDEIERLREKREALAEL 621
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
119-253 |
5.05e-15 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 71.69 E-value: 5.05e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 119 LHLAAKYGHPQCLKQLLQASCVVDVVDSSGWTalhhaetgshcvgpaaggclscsevlcsfkahlnpqdrsgatPLIIAA 198
Cdd:pfam12796 1 LHLAAKNGNLELVKLLLENGADANLQDKNGRT------------------------------------------ALHLAA 38
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1034606659 199 QMCHTDLCRLLLQQgAAANDQDlQGRTALMLACEGASPETVEVLLQGGAQPGITD 253
Cdd:pfam12796 39 KNGHLEIVKLLLEH-ADVNLKD-NGRTALHYAARSGHLEIVKLLLEKGADINVKD 91
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
86-187 |
1.19e-14 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 70.53 E-value: 1.19e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 86 FHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYGHPQCLKQLLQaSCVVDVVDsSGWTALHHAetgshcvgpA 165
Cdd:pfam12796 1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLE-HADVNLKD-NGRTALHYA---------A 69
|
90 100
....*....|....*....|..
gi 1034606659 166 AGGCLSCSEVLCSFKAHLNPQD 187
Cdd:pfam12796 70 RSGHLEIVKLLLEKGADINVKD 91
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
857-1182 |
1.90e-14 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 78.57 E-value: 1.90e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 857 DTTQLRAALEQAREDL----RDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLA 932
Cdd:TIGR02169 668 FSRSEPAELQRLRERLeglkRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLS 747
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 933 taratgeqqrtaaaELGRARDAAEARVAELPAACEEARQGLAELREASEAL----RQSVVPAS--EHRRLQEEALELRGR 1006
Cdd:TIGR02169 748 --------------SLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLearlSHSRIPEIqaELSKLEEEVSRIEAR 813
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1007 AASLEQEVVATGKEAARLRAELERERVCSVALSEHERivgTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSE 1086
Cdd:TIGR02169 814 LREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIK---SIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKE 890
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1087 RHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEkdkkitelskevfNLKEALKEQPAALATPEVEALRDQVK 1166
Cdd:TIGR02169 891 RDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEE-------------ELSEIEDPKGEDEEIPEEELSLEDVQ 957
|
330
....*....|....*.
gi 1034606659 1167 DLQQQLQEAARDHSSV 1182
Cdd:TIGR02169 958 AELQRVEEEIRALEPV 973
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
831-1174 |
4.54e-13 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 74.41 E-value: 4.54e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 831 AEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAREDLRdRDSRLRELEAASACLDEARASRLLAEEEARglRAEL 910
Cdd:PTZ00121 1092 ATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEAR-KAEDARKAEEARKAEDAKRVEIARKAEDAR--KAEE 1168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 911 AQR-EEAR-LEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVV 988
Cdd:PTZ00121 1169 ARKaEDAKkAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEE 1248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 989 PASEHRRLQEEAlelrgRAASLEQEVVATGKEAARLRAEL----ERERVCSVALSEHERivgtlqaNVAQLEGQLEELGR 1064
Cdd:PTZ00121 1249 RNNEEIRKFEEA-----RMAHFARRQAAIKAEEARKADELkkaeEKKKADEAKKAEEKK-------KADEAKKKAEEAKK 1316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1065 RHE-KTSAEVFQVQREALFMKSE--RHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFN 1141
Cdd:PTZ00121 1317 ADEaKKKAEEAKKKADAAKKKAEeaKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEA 1396
|
330 340 350
....*....|....*....|....*....|...
gi 1034606659 1142 LKEALKEQPAALATPEVEALRDQVKDLQQQLQE 1174
Cdd:PTZ00121 1397 KKKAEEDKKKADELKKAAAAKKKADEAKKKAEE 1429
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
439-1032 |
5.08e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 73.82 E-value: 5.08e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 439 RQVQELQQLLVERQEEKESLGREVESLQSRLSLLENERENTSYDVTTLQDEEGELpdlpGAEVLLSRQLSPSAQEHLASL 518
Cdd:COG1196 232 LKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEA----QAEEYELLAELARLEQDIARL 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 519 QEQVAVLTRQNQELMEKVQILENFEKDETQMEVEALAEViplalyDSLRAEFDQLRRQHAEALQALRQQETREVPREEGA 598
Cdd:COG1196 308 EERRRELEERLEELEEELAELEEELEELEEELEELEEEL------EEAEEELEEAEAELAEAEEALLEAEAELAEAEEEL 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 599 ACGESEVAGATATkngpthmelngsvapETKVNGAETIDEEAAGDETMEARTMEAEATGAEATGAEATGAKVTETKPTGA 678
Cdd:COG1196 382 EELAEELLEALRA---------------AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEE 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 679 EVREMETTEEEANMETKP---TGAQATDTETTGVEAMGVEATKTKAEEAEMQAYGVGAGQAEppvtgttnmeATGSRATG 755
Cdd:COG1196 447 AAEEEAELEEEEEALLELlaeLLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLE----------GVKAALLL 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 756 MESTGVSATGVENPGVEA---TVPGISAGPILHPGAAEASE---KLQVELETRIRGLEEALRQREREAAAELEAALGKCE 829
Cdd:COG1196 517 AGLRGLAGAVAVLIGVEAayeAALEAALAAALQNIVVEDDEvaaAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGA 596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 830 AAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAREDLRDRDSRLRELEAAsacLDEARASRLLAEEEARGLRAE 909
Cdd:COG1196 597 IGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLE---GEGGSAGGSLTGGSRRELLAA 673
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 910 LAQREEARLEQSRELEVLREQLATARATGEQQRTAAAElgrardaaearvaelpaaceEARQGLAELREASEALRQSVVP 989
Cdd:COG1196 674 LLEAEAELEELAERLAEEELELEEALLAEEEEERELAE--------------------AEEERLEEELEEEALEEQLEAE 733
|
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 1034606659 990 ASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERER 1032
Cdd:COG1196 734 REELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREI 776
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
437-983 |
5.92e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 73.82 E-value: 5.92e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 437 LERQVQELQQLLVERQEEKESLGREVESLQSRLSLLENERENTSYDVTTLQDEEGELpdlpgaevllsrqlspsaQEHLA 516
Cdd:COG1196 272 LRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAEL------------------EEELE 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 517 SLQEQVAVLTRQNQELMEKVQILENFEKDETQMEVEALAEVIP-LALYDSLRAEFDQLRRQHAEALQALRQQETREVPRE 595
Cdd:COG1196 334 ELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEaEEELEELAEELLEALRAAAELAAQLEELEEAEEALL 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 596 EGAACGESEVAGATATKNgpthmELNGSVAPETKVNGAETIDEEAAGDETMEARTMEAEATGAEATGAEATGAKVTETkp 675
Cdd:COG1196 414 ERLERLEEELEELEEALA-----ELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEEL-- 486
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 676 TGAEVREMETTEEEANMETKPTGAQATDTET---TGVEAMGVEATKTKAEEAEMQAYGVGAGQAEppvtgttNMEATGSR 752
Cdd:COG1196 487 AEAAARLLLLLEAEADYEGFLEGVKAALLLAglrGLAGAVAVLIGVEAAYEAALEAALAAALQNI-------VVEDDEVA 559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 753 ATGMEStgvsatGVENPGVEATvpgISAGPILHPGAAEASEKLQVELETRIRGLEEALRQREREAAAELEAALGKCEAAE 832
Cdd:COG1196 560 AAAIEY------LKAAKAGRAT---FLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAA 630
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 833 AEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAREDLRDRDSRLRELEAASAclDEARASRLLAEEEARGLRAELAQ 912
Cdd:COG1196 631 RLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELA--ERLAEEELELEEALLAEEEEERE 708
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1034606659 913 REEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEAL 983
Cdd:COG1196 709 LAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
788-1201 |
1.07e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 72.66 E-value: 1.07e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 788 AAEASEKLQVELETRIRGLEEALRQREREAAAELEAALGKCEAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQ 867
Cdd:COG1196 342 LEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEE 421
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 868 AREDLRDRDSRLRELEAASACLDEARASRLLAEEEArgLRAELAQREEARLEQSRELEVLREQLAT-ARATGEQQRTAAA 946
Cdd:COG1196 422 ELEELEEALAELEEEEEEEEEALEEAAEEEAELEEE--EEALLELLAELLEEAALLEAALAELLEElAEAAARLLLLLEA 499
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 947 ELGRARDAAEARVAELPAACEEARQGLAELREASEALRQsVVPASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRA 1026
Cdd:COG1196 500 EADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEA-ALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLP 578
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1027 ELERERVCSVALSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREAL----FMKSERHAAEAQLATAEQQLR 1102
Cdd:COG1196 579 LDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEaalrRAVTLAGRLREVTLEGEGGSA 658
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1103 GLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALRDQVKDLQQQLQEAARDHSSV 1182
Cdd:COG1196 659 GGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELL 738
|
410
....*....|....*....
gi 1034606659 1183 VALYRSHLLYAIQGQMDED 1201
Cdd:COG1196 739 EELLEEEELLEEEALEELP 757
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
52-145 |
1.65e-12 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 64.37 E-value: 1.65e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 52 LLQAVENNDAPRVAALIaRKGLVPTKLDPEGKSAFHLAAMRGAASCLEVMIAHGSnvMSADGAGYNALHLAAKYGHPQCL 131
Cdd:pfam12796 1 LHLAAKNGNLELVKLLL-ENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEHAD--VNLKDNGRTALHYAARSGHLEIV 77
|
90
....*....|....
gi 1034606659 132 KQLLQASCVVDVVD 145
Cdd:pfam12796 78 KLLLEKGADINVKD 91
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
864-1097 |
5.85e-12 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 70.33 E-value: 5.85e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 864 ALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQsrELEVLREQLATARAtgeqqrt 943
Cdd:COG4913 239 RAHEALEDAREQIELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEA--ELEELRAELARLEA------- 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 944 AAAELGRARDAAEARVAELPAACEEA-RQGLAELREASEALRQsvvpasEHRRLQEEALELRGRAASLEQEVVATGKEAA 1022
Cdd:COG4913 310 ELERLEARLDALREELDELEAQIRGNgGDRLEQLEREIERLER------ELEERERRRARLEALLAALGLPLPASAEEFA 383
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1034606659 1023 RLRAELERervcsvALSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATA 1097
Cdd:COG4913 384 ALRAEAAA------LLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALRDALAEA 452
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
908-1218 |
5.98e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 70.47 E-value: 5.98e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 908 AELAQREEARLEQSRELE--VLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALrq 985
Cdd:TIGR02168 209 AEKAERYKELKAELRELElaLLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEEL-- 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 986 svvpasehrrlQEEALELRGRAASLEQEVVATGKEAARLRAELERervCSVALSEHERIVGTLQANVAQLEGQLEELGRR 1065
Cdd:TIGR02168 287 -----------QKELYALANEISRLEQQKQILRERLANLERQLEE---LEAQLEELESKLDELAEELAELEEKLEELKEE 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1066 HEKTSAEVfqvqrealfmkserHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEK----DKKITELSKEVFN 1141
Cdd:TIGR02168 353 LESLEAEL--------------EELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEierlEARLERLEDRRER 418
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1034606659 1142 LKEALKEQPAALATPEVEALRDQVKDLQQQLQEAARDHSSVVAlyrshLLYAIQGQMDEDVQRILSQILQMQRLQAQ 1218
Cdd:TIGR02168 419 LQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEE-----ALEELREELEEAEQALDAAERELAQLQAR 490
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
829-1175 |
6.37e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 70.56 E-value: 6.37e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 829 EAAEAEAGRLRERVREAEgsgasgggggdttQLRAALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRA 908
Cdd:PTZ00121 1174 DAKKAEAARKAEEVRKAE-------------ELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAE 1240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 909 ELAQREEAR-LEQSRELEVLREQLATAR--ATGEQQRTAAAELGRA---RDAAEARVAELPAACEEARQGLAELREASEA 982
Cdd:PTZ00121 1241 EAKKAEEERnNEEIRKFEEARMAHFARRqaAIKAEEARKADELKKAeekKKADEAKKAEEKKKADEAKKKAEEAKKADEA 1320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 983 LRQS---------VVPASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERERVCSV-ALSEHERIVGTLQANV 1052
Cdd:PTZ00121 1321 KKKAeeakkkadaAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAkKKAEEKKKADEAKKKA 1400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1053 AQLEGQLEELGRRHE--------KTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRG--LRTEAERARQAQS------ 1116
Cdd:PTZ00121 1401 EEDKKKADELKKAAAakkkadeaKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAeeAKKKAEEAKKADEakkkae 1480
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1034606659 1117 ---RAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALRDQVKDLQQQLQEA 1175
Cdd:PTZ00121 1481 eakKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKA 1542
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
787-1167 |
7.11e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 70.56 E-value: 7.11e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 787 GAAEASEKLQVELETRIRGLEEALRQREREAAAEleaalgkcEAAEAEAGRLRERVREAEGSGASGGGggdttqlRAALE 866
Cdd:PTZ00121 1098 GKAEEAKKTETGKAEEARKAEEAKKKAEDARKAE--------EARKAEDARKAEEARKAEDAKRVEIA-------RKAED 1162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 867 QAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARglRAELAQR--EEARLEQSRELEVLREQLATARAtgEQQRta 944
Cdd:PTZ00121 1163 ARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDAR--KAEAARKaeEERKAEEARKAEDAKKAEAVKKA--EEAK-- 1236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 945 aaelgraRDAAEARVAELPAACEEARQgLAELREASEALRQSVVPASEHRRLQE--EALELRgRAASLEQEVVATGKEAA 1022
Cdd:PTZ00121 1237 -------KDAEEAKKAEEERNNEEIRK-FEEARMAHFARRQAAIKAEEARKADElkKAEEKK-KADEAKKAEEKKKADEA 1307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1023 RLRAELERERvcsvalSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLR 1102
Cdd:PTZ00121 1308 KKKAEEAKKA------DEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKAD 1381
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1034606659 1103 GLRTEAERARqaqsRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALRDQVKD 1167
Cdd:PTZ00121 1382 AAKKKAEEKK----KADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEE 1442
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
62-230 |
8.12e-12 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 68.90 E-value: 8.12e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 62 PRVAALIARKGLVPTKLDPEGKSAFHlAAMRGAASCLEV---MIAHGSNVMSADGAGYNALHLAAKYGHP--QCLKQLLQ 136
Cdd:PHA03095 132 PKVIRLLLRKGADVNALDLYGMTPLA-VLLKSRNANVELlrlLIDAGADVYAVDDRFRSLLHHHLQSFKPraRIVRELIR 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 137 ASCVVDVVDSSGWTALHHAETGSHC----VGP--AAGgclscsevlcsfkAHLNPQDRSGATPLIIAAQMCHTDLCRLLL 210
Cdd:PHA03095 211 AGCDPAATDMLGNTPLHSMATGSSCkrslVLPllIAG-------------ISINARNRYGQTPLHYAAVFNNPRACRRLI 277
|
170 180
....*....|....*....|
gi 1034606659 211 QQGAAANDQDLQGRTALMLA 230
Cdd:PHA03095 278 ALGADINAVSSDGNTPLSLM 297
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
575-1183 |
1.91e-11 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 69.01 E-value: 1.91e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 575 RQHAEALQALRQQETREVPREEGAACGESEVAGATATKNGPTHMELNGSVAPETKVNGAETIDEEAAGDEtmEARTMEAE 654
Cdd:PTZ00121 1212 RKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKAD--ELKKAEEK 1289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 655 ATGAEATGAEATgAKVTETKPTGAEVREMETTEEEANMETKPTGAQATDTETTGVEAmgvEATKTKAEEAEMQAygvgAG 734
Cdd:PTZ00121 1290 KKADEAKKAEEK-KKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAA---EAAKAEAEAAADEA----EA 1361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 735 QAEPPVTGTTNMEATGSRATGMESTGVSATGVENPGVEATVPGISAGPIlhpGAAEASEKLQVELETR---IRGLEEALR 811
Cdd:PTZ00121 1362 AEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADEL---KKAAAAKKKADEAKKKaeeKKKADEAKK 1438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 812 QREREAAAELEAALGKCEAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAR---EDLRDRDSRLRELEAASAC 888
Cdd:PTZ00121 1439 KAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKkkaDEAKKAAEAKKKADEAKKA 1518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 889 LDEARASRLLAEEEARGLRaELAQREEAR-LEQSRELEVLRE-----QLATARATGEQQRTAAAELGRARDAAEARVAEL 962
Cdd:PTZ00121 1519 EEAKKADEAKKAEEAKKAD-EAKKAEEKKkADELKKAEELKKaeekkKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEV 1597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 963 PAACEEARQGLAE-LREASEALrqsvVPASEHRRLQEEALELRGRAASLEQEVvatgKEAARLRAELERERVCSVALS-- 1039
Cdd:PTZ00121 1598 MKLYEEEKKMKAEeAKKAEEAK----IKAEELKKAEEEKKKVEQLKKKEAEEK----KKAEELKKAEEENKIKAAEEAkk 1669
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1040 -EHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREAlfmKSERHAAEaQLATAEQQLRGLRTEAERARQAQSRA 1118
Cdd:PTZ00121 1670 aEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKE---AEEKKKAE-ELKKAEEENKIKAEEAKKEAEEDKKK 1745
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1034606659 1119 QEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALRDQVKDLQQQLQEAARDHSSVV 1183
Cdd:PTZ00121 1746 AEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANI 1810
|
|
| PHA02875 |
PHA02875 |
ankyrin repeat protein; Provisional |
67-251 |
4.35e-11 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165206 [Multi-domain] Cd Length: 413 Bit Score: 66.55 E-value: 4.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 67 LIARKGLVPTKLDPEGKSAFHLAAMRGAASCLEVMIAHGS---NVMSADGAgyNALHLAAKYGHPQCLKQLLQASCVVDV 143
Cdd:PHA02875 53 LLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKfadDVFYKDGM--TPLHLATILKKLDIMKLLIARGADPDI 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 144 VDSSGWTALHHAetgshcvgpAAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMCHTDLCRLLLQQGAAANDQDLQG 223
Cdd:PHA02875 131 PNTDKFSPLHLA---------VMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNG 201
|
170 180
....*....|....*....|....*....
gi 1034606659 224 RTALM-LACEGASPETVEVLLQGGAQPGI 251
Cdd:PHA02875 202 CVAALcYAIENNKIDIVRLFIKRGADCNI 230
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
796-1218 |
5.30e-11 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 67.25 E-value: 5.30e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 796 QVELETRIRGLEEALRQREREAaaeleaalGKCEAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAREDLRDR 875
Cdd:COG4913 250 QIELLEPIRELAERYAAARERL--------AELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDAL 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 876 DSRLRELEAASACLDEARASRLlaEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAE----LGRA 951
Cdd:COG4913 322 REELDELEAQIRGNGGDRLEQL--EREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAAlleaLEEE 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 952 RDAAEARVAELPAACEEARQGLAELREASEAL--RQSVVPASEHRRLQ-----------------------------EEA 1000
Cdd:COG4913 400 LEALEEALAEAEAALRDLRRELRELEAEIASLerRKSNIPARLLALRDalaealgldeaelpfvgelievrpeeerwRGA 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1001 LE--LRGRAASLeqeVVATGKEAA------------RLRAELERERVCSVALS--EHERIVGTLQ--------------- 1049
Cdd:COG4913 480 IErvLGGFALTL---LVPPEHYAAalrwvnrlhlrgRLVYERVRTGLPDPERPrlDPDSLAGKLDfkphpfrawleaelg 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1050 --------ANVAQL---------EGQLEELGRRHEK------TSAEVF----QVQREALfmKSERHAAEAQLATAEQQLR 1102
Cdd:COG4913 557 rrfdyvcvDSPEELrrhpraitrAGQVKGNGTRHEKddrrriRSRYVLgfdnRAKLAAL--EAELAELEEELAEAEERLE 634
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1103 GLRTEaERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEqpAALATPEVEALRDQVKDLQQQLQEAARdhssv 1182
Cdd:COG4913 635 ALEAE-LDALQERREALQRLAEYSWDEIDVASAEREIAELEAELER--LDASSDDLAALEEQLEELEAELEELEE----- 706
|
490 500 510
....*....|....*....|....*....|....*.
gi 1034606659 1183 valyRSHLLYAIQGQMDEDVQRILSQILQMQRLQAQ 1218
Cdd:COG4913 707 ----ELDELKGEIGRLEKELEQAEEELDELQDRLEA 738
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
194-275 |
1.13e-10 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 59.36 E-value: 1.13e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 194 LIIAAQMCHTDLCRLLLQQGAAANDQDLQGRTALMLACEGASPETVEVLLQGGAQPGITDalGQDAAHYGALAGDKLILH 273
Cdd:pfam12796 1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEHADVNLKDN--GRTALHYAARSGHLEIVK 78
|
..
gi 1034606659 274 LL 275
Cdd:pfam12796 79 LL 80
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
438-1175 |
1.18e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 66.32 E-value: 1.18e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 438 ERQVQELQQLLVERQEEKESLGREVESLQSRLSLLENERENtsydvttlqdEEGELPDLPGAEVLLSRQLSPSAQEhlas 517
Cdd:PTZ00121 1211 ERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNN----------EEIRKFEEARMAHFARRQAAIKAEE---- 1276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 518 lqeqvavlTRQNQEL--MEKVQILENFEKDETQMEVEAL---AEVIPLAlyDSLRAEFDQLRRQhAEALQalRQQETREV 592
Cdd:PTZ00121 1277 --------ARKADELkkAEEKKKADEAKKAEEKKKADEAkkkAEEAKKA--DEAKKKAEEAKKK-ADAAK--KKAEEAKK 1343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 593 PREEGAACGESEVAGATATKNGPTHMELNGSVApETKVNGAETIDEEAAGDETMEARTMEAEATGAEATGAEATGAKVTE 672
Cdd:PTZ00121 1344 AAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEA-KKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADE 1422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 673 TKPTGAEVREMETTEEEANMETKptgaqATDTETTGVEAMGVEATKTKAEEAEmqaygvgagQAEppvtgttNMEATGSR 752
Cdd:PTZ00121 1423 AKKKAEEKKKADEAKKKAEEAKK-----ADEAKKKAEEAKKAEEAKKKAEEAK---------KAD-------EAKKKAEE 1481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 753 ATGMESTGVSATGVENPGVEATvpgisagpilhpGAAEASEKLQveletRIRGLEEALRQREREAAAeleaalgkcEAAE 832
Cdd:PTZ00121 1482 AKKADEAKKKAEEAKKKADEAK------------KAAEAKKKAD-----EAKKAEEAKKADEAKKAE---------EAKK 1535
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 833 AEAGRLRERVREAEGSGASGGGGGDTTQLRAalEQAREDLRDRDSRLRELEAASAcLDEARASRL--LAEEEARGLRAEL 910
Cdd:PTZ00121 1536 ADEAKKAEEKKKADELKKAEELKKAEEKKKA--EEAKKAEEDKNMALRKAEEAKK-AEEARIEEVmkLYEEEKKMKAEEA 1612
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 911 AQREEARL--EQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSvv 988
Cdd:PTZ00121 1613 KKAEEAKIkaEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKA-- 1690
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 989 pASEHRRLQEEALELRGRAASLEQEVvatgKEAARLRAELERERVcsvalseherivgtlqaNVAQLEGQLEELGRRHEK 1068
Cdd:PTZ00121 1691 -AEALKKEAEEAKKAEELKKKEAEEK----KKAEELKKAEEENKI-----------------KAEEAKKEAEEDKKKAEE 1748
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1069 TSAEVFQVQREALFMKSERHAAEAQLATAEQQLR-GLRTEAERARQaqsraqealdkakEKDKKITELSKEVFNLKEALK 1147
Cdd:PTZ00121 1749 AKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEeELDEEDEKRRM-------------EVDKKIKDIFDNFANIIEGGK 1815
|
730 740 750
....*....|....*....|....*....|.
gi 1034606659 1148 EQPAALATP---EVEALRDQVKDLQQQLQEA 1175
Cdd:PTZ00121 1816 EGNLVINDSkemEDSAIKEVADSKNMQLEEA 1846
|
|
| PLN03192 |
PLN03192 |
Voltage-dependent potassium channel; Provisional |
79-247 |
4.07e-10 |
|
Voltage-dependent potassium channel; Provisional
Pssm-ID: 215625 [Multi-domain] Cd Length: 823 Bit Score: 64.12 E-value: 4.07e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 79 DPEGKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYGHPQCLKQLLQASCVVDVVDSSGWTALHHAETG 158
Cdd:PLN03192 522 DPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISA 601
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 159 SHcvgpaaggcLSCSEVLCSFKAHLNPQdrSGATPLIIAAQMCHTDLCRLLLQQGAAANDQDLQGRTALMLACEGASPET 238
Cdd:PLN03192 602 KH---------HKIFRILYHFASISDPH--AAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDM 670
|
....*....
gi 1034606659 239 VEVLLQGGA 247
Cdd:PLN03192 671 VRLLIMNGA 679
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
899-1155 |
7.53e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 63.40 E-value: 7.53e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 899 AEEEARGLRAELAQREEARleqsRELEVLREQ---LATARATGEQQRTAAAELGRARD--------AAEARVAELPAACE 967
Cdd:COG4913 223 TFEAADALVEHFDDLERAH----EALEDAREQielLEPIRELAERYAAARERLAELEYlraalrlwFAQRRLELLEAELE 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 968 EARQGLAELREASEALRQsvvpasEHRRLQEEALELRGRAASleqevvATGKEAARLRAELERErvcsvalsehERIVGT 1047
Cdd:COG4913 299 ELRAELARLEAELERLEA------RLDALREELDELEAQIRG------NGGDRLEQLEREIERL----------ERELEE 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1048 LQANVAQLEGQLEELGRRHEkTSAEVFQVQREalfmkserhAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDkakE 1127
Cdd:COG4913 357 RERRRARLEALLAALGLPLP-ASAEEFAALRA---------EAAALLEALEEELEALEEALAEAEAALRDLRRELR---E 423
|
250 260
....*....|....*....|....*...
gi 1034606659 1128 KDKKITELSKEVFNLKEALKEQPAALAT 1155
Cdd:COG4913 424 LEAEIASLERRKSNIPARLLALRDALAE 451
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
499-1177 |
1.47e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 62.85 E-value: 1.47e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 499 AEVLLSRQLSPSAQEHLASLQEQvavlTRQNQELMEKVQILENFEKDET-QMEVEALAEVIPLALYDSLRAEFDQLRRQH 577
Cdd:PTZ00121 1064 AHVGQDEGLKPSYKDFDFDAKED----NRADEATEEAFGKAEEAKKTETgKAEEARKAEEAKKKAEDARKAEEARKAEDA 1139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 578 AEALQALRQQETREVP---REEGAACGESEVAGATATKNGPTHMELNGSVAPEtkVNGAETIDEEAAGDETMEARTMEAE 654
Cdd:PTZ00121 1140 RKAEEARKAEDAKRVEiarKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEE--LRKAEDARKAEAARKAEEERKAEEA 1217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 655 ATGAEATGAEATgAKVTETKPTGAEVREmetTEEEANMETKPTGAQATDTETTGVEAMGVEATKTKAEE---AEMQAYGV 731
Cdd:PTZ00121 1218 RKAEDAKKAEAV-KKAEEAKKDAEEAKK---AEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADElkkAEEKKKAD 1293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 732 GAGQAEPpVTGTTNMEATGSRATGMESTGVSATGVENPGVEATVPGISAGPilhpgAAEASEKlqvELETRIRGLEEAlR 811
Cdd:PTZ00121 1294 EAKKAEE-KKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKK-----AAEAAKA---EAEAAADEAEAA-E 1363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 812 QREREAAAELEAALGKCEAAEAEAGRLReRVREAEGSGASGGGGGDTTQLRAALEQAREDLRDRDSRLRELEAASACLDE 891
Cdd:PTZ00121 1364 EKAEAAEKKKEEAKKKADAAKKKAEEKK-KADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEE 1442
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 892 ARASRLLAEEEARGLRAELAQR--EEAR--------LEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEArvae 961
Cdd:PTZ00121 1443 AKKADEAKKKAEEAKKAEEAKKkaEEAKkadeakkkAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKA---- 1518
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 962 lpaacEEARQGlAELREASEALR-------------------------QSVVPASEHRRLQEEALELRGRAASLEQEVVA 1016
Cdd:PTZ00121 1519 -----EEAKKA-DEAKKAEEAKKadeakkaeekkkadelkkaeelkkaEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEA 1592
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1017 TGKEAARLRAELERERVCSVALSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREalfmKSERHAAEAQLAT 1096
Cdd:PTZ00121 1593 RIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKA----EEENKIKAAEEAK 1668
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1097 AEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKevfnlKEALKEQPAALATPEVEALRDQVKDLQQQLQEAA 1176
Cdd:PTZ00121 1669 KAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKK-----KEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDK 1743
|
.
gi 1034606659 1177 R 1177
Cdd:PTZ00121 1744 K 1744
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
789-1172 |
1.99e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 61.98 E-value: 1.99e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 789 AEASEKLQVELETRIRGLEEALRQREREAaaeleaalgkcEAAEAEAGRLRERVREAEGSGASGGGGGDTtqLRAALEQA 868
Cdd:PRK02224 309 AEAVEARREELEDRDEELRDRLEECRVAA-----------QAHNEEAESLREDADDLEERAEELREEAAE--LESELEEA 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 869 REDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQ-------- 940
Cdd:PRK02224 376 REAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEAlleagkcp 455
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 941 ---QRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVVPASEHRRLQEEALEL-------RGRAASL 1010
Cdd:PRK02224 456 ecgQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERREDLeeliaerRETIEEK 535
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1011 EQEVVATGKEAARLRAELERERvcSVALSEHERIVGTLQAnVAQLEGQLEELGRRhektsaevfqvqREALFMKSERHAA 1090
Cdd:PRK02224 536 RERAEELRERAAELEAEAEEKR--EAAAEAEEEAEEAREE-VAELNSKLAELKER------------IESLERIRTLLAA 600
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1091 eaqLATAEQQLRGLRteaERARQAQSRAQEALDKAKEKDKKITELSKEV--FNLKEALK-----EQPAALATPEVEALRD 1163
Cdd:PRK02224 601 ---IADAEDEIERLR---EKREALAELNDERRERLAEKRERKRELEAEFdeARIEEAREdkeraEEYLEQVEEKLDELRE 674
|
....*....
gi 1034606659 1164 QVKDLQQQL 1172
Cdd:PRK02224 675 ERDDLQAEI 683
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
973-1178 |
2.16e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.00 E-value: 2.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 973 LAELREASEALRQSVVPASEHRRLQEEALELRGRAASLEQEvvatgkeaaRLRAELERERVcsvALSEHERIVGTLQANV 1052
Cdd:TIGR02168 195 LNELERQLKSLERQAEKAERYKELKAELRELELALLVLRLE---------ELREELEELQE---ELKEAEEELEELTAEL 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1053 AQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERA----RQAQSRAQEALDKAKEK 1128
Cdd:TIGR02168 263 QELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELeaqlEELESKLDELAEELAEL 342
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1129 DKKITELSKEVFNLKEALKEQPAalatpEVEALRDQVKDLQQQLQEAARD 1178
Cdd:TIGR02168 343 EEKLEELKEELESLEAELEELEA-----ELEELESRLEELEEQLETLRSK 387
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
872-1214 |
3.17e-09 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 61.51 E-value: 3.17e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 872 LRDRDSRLRELEAASAC---LDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLA---TARATGEQQRTAA 945
Cdd:PRK04863 275 MRHANERRVHLEEALELrreLYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNlvqTALRQQEKIERYQ 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 946 AELgrarDAAEARVAELPAACEEARQGLAELREASEALRQSV-------------VPASEHRRLQ--------EEALELR 1004
Cdd:PRK04863 355 ADL----EELEERLEEQNEVVEEADEQQEENEARAEAAEEEVdelksqladyqqaLDVQQTRAIQyqqavqalERAKQLC 430
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1005 GRAA-------SLEQEVVATGKEAARLRAELERE-RVCSVALSEHE-------RIVGTLQANVAQLEGQleELGRRHEKT 1069
Cdd:PRK04863 431 GLPDltadnaeDWLEEFQAKEQEATEELLSLEQKlSVAQAAHSQFEqayqlvrKIAGEVSRSEAWDVAR--ELLRRLREQ 508
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1070 SAEVFQVQrealfmkserhAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQ 1149
Cdd:PRK04863 509 RHLAEQLQ-----------QLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEA 577
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1034606659 1150 PAalatpEVEALRDQVKDLQQQLQEAARD----HSSVVALYRshlLYAIQGQMDEDVQRILSQILQMQR 1214
Cdd:PRK04863 578 RE-----RRMALRQQLEQLQARIQRLAARapawLAAQDALAR---LREQSGEEFEDSQDVTEYMQQLLE 638
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
899-1181 |
3.37e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 61.70 E-value: 3.37e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 899 AEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEqqrtaaaelgrARDAAEARVAELPAACEEARQgLAELRE 978
Cdd:PTZ00121 1092 ATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEE-----------ARKAEDARKAEEARKAEDAKR-VEIARK 1159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 979 ASEALRQSVVPASEHRRLQEE---ALELRgRAASLEQEVVATGKEAARlRAELEReRVCSVALSEHERIVGTL------- 1048
Cdd:PTZ00121 1160 AEDARKAEEARKAEDAKKAEAarkAEEVR-KAEELRKAEDARKAEAAR-KAEEER-KAEEARKAEDAKKAEAVkkaeeak 1236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1049 ----QANVAQLEGQLEELgRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRT--EAERARQAQSRAQEAl 1122
Cdd:PTZ00121 1237 kdaeEAKKAEEERNNEEI-RKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKaeEKKKADEAKKKAEEA- 1314
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1034606659 1123 DKAKEKDKKITELSKEVFNLKEALKE--QPAALATPEVEALRDQVKDLQQQlQEAARDHSS 1181
Cdd:PTZ00121 1315 KKADEAKKKAEEAKKKADAAKKKAEEakKAAEAAKAEAEAAADEAEAAEEK-AEAAEKKKE 1374
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
861-1176 |
3.44e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 61.23 E-value: 3.44e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 861 LRAALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEeARGLRAELAQREEARLEQ-SRELEVLREQLATARAtge 939
Cdd:PRK03918 464 IEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQ-LKELEEKLKKYNLEELEKkAEEYEKLKEKLIKLKG--- 539
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 940 QQRTAAAELGRARDAaEARVAELPAACEEARQGLAELreasealrqsvvpaseHRRLQEEAL----ELRGRAASLE---Q 1012
Cdd:PRK03918 540 EIKSLKKELEKLEEL-KKKLAELEKKLDELEEELAEL----------------LKELEELGFesveELEERLKELEpfyN 602
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1013 EVVATGKEAARLRAELERERVCSVALSEHERIVGTLQANVAQLEGQLEELGRRHektSAEVFQVQREALFMKSERHAaea 1092
Cdd:PRK03918 603 EYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKY---SEEEYEELREEYLELSRELA--- 676
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1093 qlataeqqlrGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALkeqpaalatPEVEALRDQVKDLQQQL 1172
Cdd:PRK03918 677 ----------GLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKAL---------ERVEELREKVKKYKALL 737
|
....
gi 1034606659 1173 QEAA 1176
Cdd:PRK03918 738 KERA 741
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
808-1177 |
3.61e-09 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 61.51 E-value: 3.61e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 808 EALRQREREAAAELeaalgkcEAAEAEAGRLRERVReaegsgasgggggdttqLRAALEQAREDLRDRDSRLRE----LE 883
Cdd:COG3096 316 EELSARESDLEQDY-------QAASDHLNLVQTALR-----------------QQEKIERYQEDLEELTERLEEqeevVE 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 884 AASACLDEARASRLLAEEEARGLRAELAQREEA-RLEQSRELEVLREQLATARAtgeQQRTAAAELgrARDAAEARVAEL 962
Cdd:COG3096 372 EAAEQLAEAEARLEAAEEEVDSLKSQLADYQQAlDVQQTRAIQYQQAVQALEKA---RALCGLPDL--TPENAEDYLAAF 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 963 PAACEEARQGLAElreaseaLRQSVVPASEHRRLQEEALEL---------RGRAASLEQEVVatgKEAARLRAELERERV 1033
Cdd:COG3096 447 RAKEQQATEEVLE-------LEQKLSVADAARRQFEKAYELvckiageveRSQAWQTARELL---RRYRSQQALAQRLQQ 516
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1034 CSVALSEHERivgtLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAE--RA 1111
Cdd:COG3096 517 LRAQLAELEQ----RLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEqlRA 592
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1034606659 1112 RQAQSRAQE-ALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEA--LRDQVKDLQQQLQEAAR 1177
Cdd:COG3096 593 RIKELAARApAWLAAQDALERLREQSGEALADSQEVTAAMQQLLEREREAtvERDELAARKQALESQIE 661
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
791-1032 |
1.62e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 59.16 E-value: 1.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 791 ASEKLQvELETRIRGLEEALRQREREAaaeleaalgkcEAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQARE 870
Cdd:COG4913 608 NRAKLA-ALEAELAELEEELAEAEERL-----------EALEAELDALQERREALQRLAEYSWDEIDVASAEREIAELEA 675
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 871 DLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGR 950
Cdd:COG4913 676 ELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERF 755
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 951 ARDAAEARVAELPAACEEARQGL-AELREASEALRQ----------------SVVPAS------EHRRLQEEAL-ELRGR 1006
Cdd:COG4913 756 AAALGDAVERELRENLEERIDALrARLNRAEEELERamrafnrewpaetadlDADLESlpeylaLLDRLEEDGLpEYEER 835
|
250 260
....*....|....*....|....*.
gi 1034606659 1007 AASLEQEvvATGKEAARLRAELERER 1032
Cdd:COG4913 836 FKELLNE--NSIEFVADLLSKLRRAI 859
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
788-1182 |
2.10e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 58.91 E-value: 2.10e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 788 AAEASEKLQVELETRIRGLE---EALRQREREAAAELEAALGKCEAAEAEAGRLRERVREAEGSGASGGGGGDTTQLR-- 862
Cdd:TIGR02168 359 ELEELEAELEELESRLEELEeqlETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKel 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 863 ----AALEQAREDLRDRDSRLRE-LEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLAtarat 937
Cdd:TIGR02168 439 qaelEELEEELEELQEELERLEEaLEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLK----- 513
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 938 geQQRTAAAELGRARDAAEARV---AELPAACEEARQ-----GLAELREASEALRQS--------VVPASEHRRLQEEAL 1001
Cdd:TIGR02168 514 --NQSGLSGILGVLSELISVDEgyeAAIEAALGGRLQavvveNLNAAKKAIAFLKQNelgrvtflPLDSIKGTEIQGNDR 591
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1002 ELR-------GRAASLEQE----------------VVATGKEAARLRAELERE------------RVCSVALSEHERIVG 1046
Cdd:TIGR02168 592 EILkniegflGVAKDLVKFdpklrkalsyllggvlVVDDLDNALELAKKLRPGyrivtldgdlvrPGGVITGGSAKTNSS 671
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1047 TL--QANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDK 1124
Cdd:TIGR02168 672 ILerRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQ 751
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1034606659 1125 A----KEKDKKITELSKEVFNLKEALKEQPAalatpEVEALRDQVKDLQQQLQEAARDHSSV 1182
Cdd:TIGR02168 752 LskelTELEAEIEELEERLEEAEEELAEAEA-----EIEELEAQIEQLKEELKALREALDEL 808
|
|
| Ank_5 |
pfam13857 |
Ankyrin repeats (many copies); |
101-155 |
3.17e-08 |
|
Ankyrin repeats (many copies);
Pssm-ID: 433530 [Multi-domain] Cd Length: 56 Bit Score: 51.19 E-value: 3.17e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1034606659 101 MIAHGS-NVMSADGAGYNALHLAAKYGHPQCLKQLLQASCVVDVVDSSGWTALHHA 155
Cdd:pfam13857 1 LLEHGPiDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
424-1164 |
7.03e-08 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 57.16 E-value: 7.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 424 LLYASPEASSLHI----LERQVQELQQLLVERQEEKESLGRE--------VESLQSRLSLLENERENTSYDVTTLQDEEG 491
Cdd:pfam12128 253 LESAELRLSHLHFgyksDETLIASRQEERQETSAELNQLLRTlddqwkekRDELNGELSAADAAVAKDRSELEALEDQHG 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 492 ELPDLPGAEVLLSRQLSPSAQEHLASLQEQVAVLTRQNQELMEKVQILENFEKDETQMEVEALaeviplalYDSLRAEFD 571
Cdd:pfam12128 333 AFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGI--------KDKLAKIRE 404
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 572 QLRRQHAEALQALRQQETREVPREEGAACGESEVAGATATKNGPTHMELNGSVA-PETKVNGAETIDEEAAGDETMEART 650
Cdd:pfam12128 405 ARDRQLAVAEDDLQALESELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATAtPELLLQLENFDERIERAREEQEAAN 484
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 651 MEAEATGAEATGAEATGAKVTEtKPTGAEVREMETTEEEANMETKPTGAQATDTETTGVEAMGVEATKTKAEEAEMqayg 730
Cdd:pfam12128 485 AEVERLQSELRQARKRRDQASE-ALRQASRRLEERQSALDELELQLFPQAGTLLHFLRKEAPDWEQSIGKVISPEL---- 559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 731 VGAGQAEPPVTGttnmeatgsratgmestgvsatgvENPGVEATVPGISagpiLHPGAAEASEKLQveletrirgLEEAL 810
Cdd:pfam12128 560 LHRTDLDPEVWD------------------------GSVGGELNLYGVK----LDLKRIDVPEWAA---------SEEEL 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 811 RQREREAAAELEAALGKCEAAEAEAGRLRERVREAEGSGasgggggdtTQLRAALEQAREDLRDRDSRLRELEAAsacLD 890
Cdd:pfam12128 603 RERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREE---------TFARTALKNARLDLRRLFDEKQSEKDK---KN 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 891 EARASRL-LAEEEARGLRAELAQREearLEQSRELEVLREQLATARATGEQQRTAAAElgrARDAAEARVAELPAACEEA 969
Cdd:pfam12128 671 KALAERKdSANERLNSLEAQLKQLD---KKHQAWLEEQKEQKREARTEKQAYWQVVEG---ALDAQLALLKAAIAARRSG 744
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 970 RqglaelreasealrqsvvpASEHRRLQEE-ALELRGRAASlEQEVVATGKEAARLRAELERERVCSVALSEHERIVGT- 1047
Cdd:pfam12128 745 A-------------------KAELKALETWyKRDLASLGVD-PDVIAKLKREIRTLERKIERIAVRRQEVLRYFDWYQEt 804
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1048 -------LQANVAQLEGQLEELGRRHEKTSAEVfQVQREALFMksERHAAEAQLATAEQQLRGLRTEAER---------A 1111
Cdd:pfam12128 805 wlqrrprLATQLSNIERAISELQQQLARLIADT-KLRRAKLEM--ERKASEKQQVRLSENLRGLRCEMSKlatlkedanS 881
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*..
gi 1034606659 1112 RQAQSRAQE---ALDKAKEKDKKITE-LSKEVFNLKEALKEQPAALATPEVEALRDQ 1164
Cdd:pfam12128 882 EQAQGSIGErlaQLEDLKLKRDYLSEsVKKYVEHFKNVIADHSGSGLAETWESLREE 938
|
|
| PLN03192 |
PLN03192 |
Voltage-dependent potassium channel; Provisional |
70-244 |
8.87e-08 |
|
Voltage-dependent potassium channel; Provisional
Pssm-ID: 215625 [Multi-domain] Cd Length: 823 Bit Score: 56.80 E-value: 8.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 70 RKGLVPTKLDPEGKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYGHPQCLKQLLQASCVVDvvdssgw 149
Cdd:PLN03192 546 KAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISD------- 618
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 150 talhhaetgshcvgPAAGGCLSCSEV----LCSFKAHL------NPQDRSGATPLIIAAQMCHTDLCRLLLQQGAAANDQ 219
Cdd:PLN03192 619 --------------PHAAGDLLCTAAkrndLTAMKELLkqglnvDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKA 684
|
170 180
....*....|....*....|....*
gi 1034606659 220 DLQgrtalmlacEGASPETVEVLLQ 244
Cdd:PLN03192 685 NTD---------DDFSPTELRELLQ 700
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
192-243 |
9.38e-08 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 49.58 E-value: 9.38e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 1034606659 192 TPLIIAAQMCHTDLCRLLLQQGAAANDQDLQGRTALMLACEGASPETVEVLL 243
Cdd:pfam13637 3 TALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
863-1179 |
2.22e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 55.16 E-value: 2.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 863 AALEQAREDLRDRDSRLRELEAASACLDEARAsRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQR 942
Cdd:COG4717 88 EEYAELQEELEELEEELEELEAELEELREELE-KLEKLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELE 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 943 TAAAELGRAR-------------------------DAAEARVAELPAACEEARQGLAELREASEALRQSVVPASEHRRLQ 997
Cdd:COG4717 167 ELEAELAELQeeleelleqlslateeelqdlaeelEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLK 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 998 EEALELRGRAASLEQEVVATGKEAARLR--------------AELERERVCSVALSEHERIVGTLQANVAQLEGQLEELG 1063
Cdd:COG4717 247 EARLLLLIAAALLALLGLGGSLLSLILTiagvlflvlgllalLFLLLAREKASLGKEAEELQALPALEELEEEELEELLA 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1064 RRHEKTSAEVFQVqREALFMKSERHAAEAQLATAEQQLRGLRTEAERAR---QAQSRAQEALDKAKEKDKKITELSKEVF 1140
Cdd:COG4717 327 ALGLPPDLSPEEL-LELLDRIEELQELLREAEELEEELQLEELEQEIAAllaEAGVEDEEELRAALEQAEEYQELKEELE 405
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1034606659 1141 NLKEALKEQP----AALATPEVEALRDQVKDLQQQLQEAARDH 1179
Cdd:COG4717 406 ELEEQLEELLgeleELLEALDEEELEEELEELEEELEELEEEL 448
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
437-1064 |
2.64e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 55.45 E-value: 2.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 437 LERQVQELQQLLVERQEEKESLGREVESLQSRLSLLENERENTSYDVTTLQDE----EGELPDLPGAEVLLSRQLSpSAQ 512
Cdd:TIGR02168 328 LESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQletlRSKVAQLELQIASLNNEIE-RLE 406
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 513 EHLASLQEQVAVLTRQNQELMEKvqiLENFEKDETQMEVEALAEVIplalyDSLRAEFDQLRRQHAEALQALRQQETREV 592
Cdd:TIGR02168 407 ARLERLEDRRERLQQEIEELLKK---LEEAELKELQAELEELEEEL-----EELQEELERLEEALEELREELEEAEQALD 478
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 593 PREEGAACGESEVAG---------------ATATKNGPTHMELNGSVAPETKV-NGAETIDEEAAGdETMEARTME--AE 654
Cdd:TIGR02168 479 AAERELAQLQARLDSlerlqenlegfsegvKALLKNQSGLSGILGVLSELISVdEGYEAAIEAALG-GRLQAVVVEnlNA 557
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 655 ATGAEATGAEATGAKVTETKPTGAEVREMETTEEEANMETKPTGAQATDTETTGVEAM--------GVEATKTKAEEAEM 726
Cdd:TIGR02168 558 AKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRkalsyllgGVLVVDDLDNALEL 637
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 727 QAY------------------GVGAGQAEPPVTGTTN-----------MEATGSRATGME----STGVSATGVENPGVEA 773
Cdd:TIGR02168 638 AKKlrpgyrivtldgdlvrpgGVITGGSAKTNSSILErrreieeleekIEELEEKIAELEkalaELRKELEELEEELEQL 717
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 774 TVPGISAGPILHPGAAE-ASEKLQVELETRIRGLEEALRQREREAAAELEAALGKCEAAEAEAGRLRERVREAEGSGASG 852
Cdd:TIGR02168 718 RKELEELSRQISALRKDlARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEE 797
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 853 GGGGDTTQ--LRAALEQAREDLRDRDSRL----RELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEV 926
Cdd:TIGR02168 798 LKALREALdeLRAELTLLNEEAANLRERLesleRRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEA 877
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 927 LREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVvpasehRRLQEEALELrgr 1006
Cdd:TIGR02168 878 LLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRI------DNLQERLSEE--- 948
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*...
gi 1034606659 1007 aASLEQEVVatgkeaarlrAELERERVCSVALSEHErivgtlqanVAQLEGQLEELGR 1064
Cdd:TIGR02168 949 -YSLTLEEA----------EALENKIEDDEEEARRR---------LKRLENKIKELGP 986
|
|
| PHA02874 |
PHA02874 |
ankyrin repeat protein; Provisional |
47-230 |
2.64e-07 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165205 [Multi-domain] Cd Length: 434 Bit Score: 54.58 E-value: 2.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 47 KSDERLLQAVENNDAPRVAALIARKGLVPTKlDPEGKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYG 126
Cdd:PHA02874 123 ELKTFLHYAIKKGDLESIKMLFEYGADVNIE-DDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYG 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 127 HPQCLKQLLQASCVVDVVDSSGWTALHHAETGSHCVGPaaggclscsevLCSFKAHLNPQDRSGATPLIIAAQM-CHTDL 205
Cdd:PHA02874 202 DYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIE-----------LLINNASINDQDIDGSTPLHHAINPpCDIDI 270
|
170 180
....*....|....*....|....*
gi 1034606659 206 CRLLLQQGAAANDQDLQGRTALMLA 230
Cdd:PHA02874 271 IDILLYHKADISIKDNKGENPIDTA 295
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
864-1177 |
4.16e-07 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 54.58 E-value: 4.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 864 ALEQAREDLRDRDSRLRELEAASA----CLDEARASRLLAEEEARGLRAELAQREEA-RLEQSRELEVLREQLATARAtg 938
Cdd:PRK04863 349 KIERYQADLEELEERLEEQNEVVEeadeQQEENEARAEAAEEEVDELKSQLADYQQAlDVQQTRAIQYQQAVQALERA-- 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 939 eQQRTAAAELgrARDAAEARVAELPAACEEARQglaELREASEALRQsvvpASEHRRLQEEALELrgraasleqevvatg 1018
Cdd:PRK04863 427 -KQLCGLPDL--TADNAEDWLEEFQAKEQEATE---ELLSLEQKLSV----AQAAHSQFEQAYQL--------------- 481
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1019 keAARLRAELERERVCSVA---LSEHERIVgTLQANVAQLEGQLEELGRRHEKtSAEVFQVQREALfMKSERH-----AA 1090
Cdd:PRK04863 482 --VRKIAGEVSRSEAWDVArelLRRLREQR-HLAEQLQQLRMRLSELEQRLRQ-QQRAERLLAEFC-KRLGKNlddedEL 556
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1091 EAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEA---LKEQ-PAALATPEvealrdQVK 1166
Cdd:PRK04863 557 EQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDAlarLREQsGEEFEDSQ------DVT 630
|
330
....*....|.
gi 1034606659 1167 DLQQQLQEAAR 1177
Cdd:PRK04863 631 EYMQQLLERER 641
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
874-1080 |
5.77e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.23 E-value: 5.77e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 874 DRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARD 953
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 954 AAEARVAE-LPAACEEARQGLAEL----REASEALRQSVVPASEHRRLQEEALELRGRAASLE---QEVVATGKEAARLR 1025
Cdd:COG4942 101 AQKEELAElLRALYRLGRQPPLALllspEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAalrAELEAERAELEALL 180
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1034606659 1026 AELERERV-CSVALSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREA 1080
Cdd:COG4942 181 AELEEERAaLEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
939-1175 |
5.97e-07 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 53.87 E-value: 5.97e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 939 EQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASealrQSVVPASEHRRLQEEALELRGRAASLEQEVVATG 1018
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKN----GLVDLSEEAKLLLQQLSELESQLAEARAELAEAE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1019 KEAARLRAELERERVCSVALSEHERIvGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREalfmkseRHAAEAQLATAE 1098
Cdd:COG3206 240 ARLAALRAQLGSGPDALPELLQSPVI-QQLRAQLAELEAELAELSARYTPNHPDVIALRAQ-------IAALRAQLQQEA 311
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1034606659 1099 QQ-LRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEalkeqpaalatpEVEALRDQVKDLQQQLQEA 1175
Cdd:COG3206 312 QRiLASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLER------------EVEVARELYESLLQRLEEA 377
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
861-1174 |
1.84e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 52.37 E-value: 1.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 861 LRAALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQlataratgeq 940
Cdd:PRK03918 212 ISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEK---------- 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 941 qrtaAAELGRARDAAEARVaELPAACEEARQGLAELREASEALRQSvvpASEHRRLQEEALELRGRAASLEQEVVATGKE 1020
Cdd:PRK03918 282 ----VKELKELKEKAEEYI-KLSEFYEEYLDELREIEKRLSRLEEE---INGIEERIKELEEKEERLEELKKKLKELEKR 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1021 AARLRA---ELERERVCSVALSEHERIVGTLqaNVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERhaaeAQLATA 1097
Cdd:PRK03918 354 LEELEErheLYEEAKAKKEELERLKKRLTGL--TPEKLEKELEELEKAKEEIEEEISKITARIGELKKEI----KELKKA 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1098 EQQLRGLR----------TEAERARQAQSRAQEALDKAKEK---DKKITELSKEVFNLKEALKEQPAALAtpeVEALRDQ 1164
Cdd:PRK03918 428 IEELKKAKgkcpvcgrelTEEHRKELLEEYTAELKRIEKELkeiEEKERKLRKELRELEKVLKKESELIK---LKELAEQ 504
|
330
....*....|
gi 1034606659 1165 VKDLQQQLQE 1174
Cdd:PRK03918 505 LKELEEKLKK 514
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
875-1207 |
2.42e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 52.15 E-value: 2.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 875 RDSRLRELEAASACLdEARASRLLAEEEARGLRAelaqREEARLEQSReLEVLREQLATARATGE---QQRTAAAELGRA 951
Cdd:pfam12128 403 REARDRQLAVAEDDL-QALESELREQLEAGKLEF----NEEEYRLKSR-LGELKLRLNQATATPElllQLENFDERIERA 476
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 952 RDAAEARVAELPAACEEARQGLAELREASEALRQsvvpasEHRRLQeealELRGRAASLEQEVVA---TGKEAARLRAEL 1028
Cdd:pfam12128 477 REEQEAANAEVERLQSELRQARKRRDQASEALRQ------ASRRLE----ERQSALDELELQLFPqagTLLHFLRKEAPD 546
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1029 ERERVCSVALSE-------HERIVGTLQANVAQLEGQLEELGR-RHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQ 1100
Cdd:pfam12128 547 WEQSIGKVISPEllhrtdlDPEVWDGSVGGELNLYGVKLDLKRiDVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQ 626
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1101 LRGLRTEAERARQAQSRAQEALDKAKEkdkKITELSKEVFNLKEALKEQPAALATPEVEALRD----------QVKDLQQ 1170
Cdd:pfam12128 627 LVQANGELEKASREETFARTALKNARL---DLRRLFDEKQSEKDKKNKALAERKDSANERLNSleaqlkqldkKHQAWLE 703
|
330 340 350
....*....|....*....|....*....|....*..
gi 1034606659 1171 QLQEAARDHSSVVALYRSHLLYAIQGQMDEDVQRILS 1207
Cdd:pfam12128 704 EQKEQKREARTEKQAYWQVVEGALDAQLALLKAAIAA 740
|
|
| PHA02874 |
PHA02874 |
ankyrin repeat protein; Provisional |
79-258 |
3.29e-06 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165205 [Multi-domain] Cd Length: 434 Bit Score: 51.12 E-value: 3.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 79 DPEGKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYGHPQCLKQLLQASCVVDVVDSSGWTALHHAetg 158
Cdd:PHA02874 121 DAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNA--- 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 159 shcvgpAAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIAaqMCHTDLCRLLLQQGAAANDQDLQGRTALMLACE-GASPE 237
Cdd:PHA02874 198 ------AEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNA--IIHNRSAIELLINNASINDQDIDGSTPLHHAINpPCDID 269
|
170 180
....*....|....*....|.
gi 1034606659 238 TVEVLLQGGAQPGITDALGQD 258
Cdd:PHA02874 270 IIDILLYHKADISIKDNKGEN 290
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
862-1174 |
3.37e-06 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 51.05 E-value: 3.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 862 RAALEQAR--EDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAEL---AQREEARLEQSRE-LEVLREQLATAR 935
Cdd:pfam07888 28 RAELLQNRleECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELesrVAELKEELRQSREkHEELEEKYKELS 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 936 ATGEQQRTAAAELGRARDAAEARV------------------AELPAACEEARQGLAELREASEALRQS----VVPASEH 993
Cdd:pfam07888 108 ASSEELSEEKDALLAQRAAHEARIreleediktltqrvlereTELERMKERAKKAGAQRKEEEAERKQLqaklQQTEEEL 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 994 RRLQEEALELRGRAASLEQEVVA--------TGKEAARLRAELERERVCSVALSEHERIVGTLQAnVAQLEGQLEELGRR 1065
Cdd:pfam07888 188 RSLSKEFQELRNSLAQRDTQVLQlqdtittlTQKLTTAHRKEAENEALLEELRSLQERLNASERK-VEGLGEELSSMAAQ 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1066 HEKTSAEVFQVQREALFMKserhaaeAQLATAEQQLRglrteAERARQAQSRaqEALDKAKEKDK-KITELSKEVFNLKE 1144
Cdd:pfam07888 267 RDRTQAELHQARLQAAQLT-------LQLADASLALR-----EGRARWAQER--ETLQQSAEADKdRIEKLSAELQRLEE 332
|
330 340 350
....*....|....*....|....*....|....*.
gi 1034606659 1145 ALKEQPAALATPEVEALRD------QVKDLQQQLQE 1174
Cdd:pfam07888 333 RLQEERMEREKLEVELGREkdcnrvQLSESRRELQE 368
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1042-1218 |
3.40e-06 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 51.56 E-value: 3.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1042 ERIVGTLQANVAQLEGQLEELGRRHEKTSAEV--FQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQ 1119
Cdd:COG3206 167 ELRREEARKALEFLEEQLPELRKELEEAEAALeeFRQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALR 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1120 EALDKAKEKDKKITElSKEVFNLKEALKEQPAALAT---------PEVEALRDQVKDLQQQL-QEAARDHSSVVALYRSh 1189
Cdd:COG3206 247 AQLGSGPDALPELLQ-SPVIQQLRAQLAELEAELAElsarytpnhPDVIALRAQIAALRAQLqQEAQRILASLEAELEA- 324
|
170 180
....*....|....*....|....*....
gi 1034606659 1190 lLYAIQGQMDEDVQRILSQILQMQRLQAQ 1218
Cdd:COG3206 325 -LQAREASLQAQLAQLEARLAELPELEAE 352
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
115-155 |
3.47e-06 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 45.34 E-value: 3.47e-06
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 1034606659 115 GYNALHLAAKYGHPQCLKQLLQASCVVDVVDSSGWTALHHA 155
Cdd:pfam13637 1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFA 41
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
967-1178 |
4.19e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.53 E-value: 4.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 967 EEARQGLAELREASEALRQSVvpasehRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERERVcsvALSEHERIVG 1046
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKEL------AALKKEEKALLKQLAALERRIAALARRIRALEQELAALEA---ELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1047 TLQANVAQLEGQLEELGRRHEKT-----------SAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQ 1115
Cdd:COG4942 94 ELRAELEAQKEELAELLRALYRLgrqpplalllsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAER 173
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1034606659 1116 SRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATpEVEALRDQVKDLQQQLQEAARD 1178
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQKLLARLEKELAELAA-ELAELQQEAEELEALIARLEAE 235
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
793-1185 |
4.61e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.92 E-value: 4.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 793 EKLQVELETRIRGLEEALRQREREAAAELeaalgKCEAAEAEAGRLRERVReaegsgasGGGGGDTTQLRAALEQAREDL 872
Cdd:COG4717 135 EALEAELAELPERLEELEERLEELRELEE-----ELEELEAELAELQEELE--------ELLEQLSLATEEELQDLAEEL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 873 RDRDSRLRELEAAsacLDEARASRLLAEEEARGLRAELaqREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRAR 952
Cdd:COG4717 202 EELQQRLAELEEE---LEEAQEELEELEEELEQLENEL--EAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIA 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 953 DAAEARVAELPAACEEARQGLAELREASEALRQSVVPASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAELEREr 1032
Cdd:COG4717 277 GVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLRE- 355
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1033 vcsvaLSEHERivgtlQANVAQLEGQLEELGRRHEKTSAEVFqvqREALFMKSERHAAEAQLATAEQQLRGLRTEAERAR 1112
Cdd:COG4717 356 -----AEELEE-----ELQLEELEQEIAALLAEAGVEDEEEL---RAALEQAEEYQELKEELEELEEQLEELLGELEELL 422
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1034606659 1113 QA------QSRAQEALDKAKEKDKKITELSKEVFNLKEALKEqpaALATPEVEALRDQVKDLQQQLQEAARDHSSVVAL 1185
Cdd:COG4717 423 EAldeeelEEELEELEEELEELEEELEELREELAELEAELEQ---LEEDGELAELLQELEELKAELRELAEEWAALKLA 498
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
790-1125 |
4.97e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.22 E-value: 4.97e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 790 EASEKLQVELETRIRGLeealrqrereaaaeleaalgkceaAEAEAGRLRERVReaegsgasgggggdttQLRAALEQAR 869
Cdd:TIGR02169 268 EEIEQLLEELNKKIKDL------------------------GEEEQLRVKEKIG----------------ELEAEIASLE 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 870 EDLRDRDSRLRELEaasacldearasrllaeeearglrAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELG 949
Cdd:TIGR02169 308 RSIAEKERELEDAE------------------------ERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELK 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 950 RARDAAEARVAELPAACEEARQGLAELREASEALRQSVVPA-SEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAEL 1028
Cdd:TIGR02169 364 EELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELkRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEK 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1029 ErervcsvalseherivgTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTea 1108
Cdd:TIGR02169 444 E-----------------DKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEE-- 504
|
330
....*....|....*..
gi 1034606659 1109 eraRQAQSRAQEALDKA 1125
Cdd:TIGR02169 505 ---RVRGGRAVEEVLKA 518
|
|
| PHA03100 |
PHA03100 |
ankyrin repeat protein; Provisional |
98-275 |
5.16e-06 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222984 [Multi-domain] Cd Length: 422 Bit Score: 50.43 E-value: 5.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 98 LEVMIAHGSNVMSADGAGYNALHLAA--KYGHPQCLKQLLQASCVVDVVDSSGWTALHHAETGSHCVgpaaggcLSCSEV 175
Cdd:PHA03100 89 VKLLLEYGANVNAPDNNGITPLLYAIskKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKID-------LKILKL 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 176 LCSFKAHLNPQDRsgatpliiaaqmchtdlCRLLLQQGAAANDQDLQGRTALMLACEGASPETVEVLLQGGAQPGITDAL 255
Cdd:PHA03100 162 LIDKGVDINAKNR-----------------VNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKY 224
|
170 180
....*....|....*....|
gi 1034606659 256 GQDAAHYGALAGDKLILHLL 275
Cdd:PHA03100 225 GDTPLHIAILNNNKEIFKLL 244
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
908-1137 |
6.10e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 6.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 908 AELAQREEARLEQ-SRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQS 986
Cdd:COG4942 19 ADAAAEAEAELEQlQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 987 VVPASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERErvcsvALSEHERIVGTLQANVAQLEGQLEELGRRH 1066
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKY-----LAPARREQAEELRADLAELAALRAELEAER 173
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1034606659 1067 EKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSK 1137
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
860-1218 |
6.21e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 50.73 E-value: 6.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 860 QLRAALEQAREDLRDRDS---RLRELEAASA--CLDEARASRLLAEEEAR--GLRAELAQREEARLEQSRELEVLREQLA 932
Cdd:PRK04863 517 QLRMRLSELEQRLRQQQRaerLLAEFCKRLGknLDDEDELEQLQEELEARleSLSESVSEARERRMALRQQLEQLQARIQ 596
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 933 TARATGEQQRTAAAELGRARDAAEARVAElPAACEEARQGLAE-LREASEALRQSvvpASEHRRLQEEALELRGRAASLE 1011
Cdd:PRK04863 597 RLAARAPAWLAAQDALARLREQSGEEFED-SQDVTEYMQQLLErERELTVERDEL---AARKQALDEEIERLSQPGGSED 672
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1012 QE---------------------------------------VVATGKEAARLRAELE----------------RERVCSV 1036
Cdd:PRK04863 673 PRlnalaerfggvllseiyddvsledapyfsalygparhaiVVPDLSDAAEQLAGLEdcpedlyliegdpdsfDDSVFSV 752
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1037 ALSEHERIVGTLQANV--------------------AQLEGQLEELGRRHEKTSAEVFQVQR--EALFMKSERHAA---- 1090
Cdd:PRK04863 753 EELEKAVVVKIADRQWrysrfpevplfgraarekriEQLRAEREELAERYATLSFDVQKLQRlhQAFSRFIGSHLAvafe 832
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1091 ---EAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEK-------------------DKKITELSKEVFNLKEA--- 1145
Cdd:PRK04863 833 adpEAELRQLNRRRVELERALADHESQEQQQRSQLEQAKEGlsalnrllprlnlladetlADRVEEIREQLDEAEEAkrf 912
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1146 ----------LKEQPAALATP--EVEALRDQVKDLQQQLQEA---ARDHSSVVALyRSHLLYaiqgqmdEDVQRILSQIL 1210
Cdd:PRK04863 913 vqqhgnalaqLEPIVSVLQSDpeQFEQLKQDYQQAQQTQRDAkqqAFALTEVVQR-RAHFSY-------EDAAEMLAKNS 984
|
....*....
gi 1034606659 1211 QMQ-RLQAQ 1218
Cdd:PRK04863 985 DLNeKLRQR 993
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
84-135 |
7.03e-06 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 44.57 E-value: 7.03e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 1034606659 84 SAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYGHPQCLKQLL 135
Cdd:pfam13637 3 TALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
57-262 |
9.95e-06 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 49.64 E-value: 9.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 57 ENNDAPRVAALIARKGLVPTKlDPEGKSAFHLAAMRGAASCLEV---MIAHGSNVMSADGAGYNALHLaakyghpqclkq 133
Cdd:PHA03095 23 SNVTVEEVRRLLAAGADVNFR-GEYGKTPLHLYLHYSSEKVKDIvrlLLEAGADVNAPERCGFTPLHL------------ 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 134 LLQASCVVDVVDssgwtalhhaetgshcvgpaaggclscseVLCSFKAHLNPQDRSGATPL-IIAAQMC-HTDLCRLLLQ 211
Cdd:PHA03095 90 YLYNATTLDVIK-----------------------------LLIKAGADVNAKDKVGRTPLhVYLSGFNiNPKVIRLLLR 140
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1034606659 212 QGAAANDQDLQGRTAL--MLACEGASPETVEVLLQGGAQPGITDALGQDAAHY 262
Cdd:PHA03095 141 KGADVNALDLYGMTPLavLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHH 193
|
|
| COG3903 |
COG3903 |
Predicted ATPase [General function prediction only]; |
810-1122 |
1.59e-05 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443109 [Multi-domain] Cd Length: 933 Bit Score: 49.25 E-value: 1.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 810 LRQREREAAAEleaalgkCEAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAREDLRDRDSRLRELEAASACL 889
Cdd:COG3903 557 LRGLLREGRRW-------LERALAAAGEAAAALAAAAALAAAAAAARAAAAAAAAAAAAAAAAAAAAAAAAAALLLLAAL 629
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 890 DEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEA 969
Cdd:COG3903 630 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAAAAAAAAALAAAAAALAAAAAAAALAAAAAA 709
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 970 RQGLAELREASEALRQSVVPASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERERVCSVALSEHERIVGTLQ 1049
Cdd:COG3903 710 ALAAAAAAAAAAAAAAALLAAAAAAALAAAAAAAALALAAAAAAAAAAAAAAALAAAAAAAALAALLLALAAAAAALAAA 789
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1034606659 1050 ANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEAL 1122
Cdd:COG3903 790 AAAAAAAAAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAALAAALAAAAAAAAAAAAAAAAAAALAAALAAAA 862
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
859-1174 |
1.82e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 49.35 E-value: 1.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 859 TQLRAALEQAREDLRDRDSRL-RELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARAT 937
Cdd:pfam15921 327 SQLRSELREAKRMYEDKIEELeKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDR 406
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 938 GEQQRTAAAELGRARDAAEARVAELPAACEEARqglaelreaSEALRQsvvpasehrrLQEEALELRGRAASLEQEVVAT 1017
Cdd:pfam15921 407 DTGNSITIDHLRRELDDRNMEVQRLEALLKAMK---------SECQGQ----------MERQMAAIQGKNESLEKVSSLT 467
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1018 gkeaARLRAELERERVCSVALSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVqrealfmkseRHAAEAQLata 1097
Cdd:pfam15921 468 ----AQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKL----------RSRVDLKL--- 530
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1034606659 1098 eQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEA--LRDQVKDLQQQLQE 1174
Cdd:pfam15921 531 -QELQHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKaqLEKEINDRRLELQE 608
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
870-1220 |
1.85e-05 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 48.98 E-value: 1.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 870 EDLRDRDSrLRELEAASACLDEARASRllAEEEA---RGLRAELAQREEARLE-QSRELEVLREQLATARatgEQQRTAA 945
Cdd:pfam07111 325 QDLEHRDS-VKQLRGQVAELQEQVTSQ--SQEQAilqRALQDKAAEVEVERMSaKGLQMELSRAQEARRR---QQQQTAS 398
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 946 AE--LGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVVPASEHRRLQEEALELrgraASLEQEVVATGKEAAR 1023
Cdd:pfam07111 399 AEeqLKFVVNAMSSTQIWLETTMTRVEQAVARIPSLSNRLSYAVRKVHTIKGLMARKVAL----AQLRQESCPPPPPAPP 474
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1024 LRAELERErvCSVALSEHERIVGTLQANVAQLEgqlEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLrg 1103
Cdd:pfam07111 475 VDADLSLE--LEQLREERNRLDAELQLSAHLIQ---QEVGRAREQGEAERQQLSEVAQQLEQELQRAQESLASVGQQL-- 547
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1104 lrteaERARQAQsraQEALDKAKEKDKKITElSKEVFNlkEALKEQPAALATpeveALRDQVKDLQQQLQEAARDHSSVV 1183
Cdd:pfam07111 548 -----EVARQGQ---QESTEEAASLRQELTQ-QQEIYG--QALQEKVAEVET----RLREQLSDTKRRLNEARREQAKAV 612
|
330 340 350
....*....|....*....|....*....|....*..
gi 1034606659 1184 ALYRShllyaIQGQMDEDVQRilSQilQMQRLQAQGR 1220
Cdd:pfam07111 613 VSLRQ-----IQHRATQEKER--NQ--ELRRLQDEAR 640
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
82-264 |
1.93e-05 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 48.48 E-value: 1.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 82 GKSAFHLAAMRGA-ASCLEVMIAHGSNVMSADGAGYNALH--LAAKYGHPQCLKQLLQASCVVDVVDSSGWTALhHAETG 158
Cdd:PHA03095 83 GFTPLHLYLYNATtLDVIKLLIKAGADVNAKDKVGRTPLHvyLSGFNINPKVIRLLLRKGADVNALDLYGMTPL-AVLLK 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 159 SHCVgpaaggCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMCHTDLC--RLLLQQGAAANDQDLQGRTALMLACEGASP 236
Cdd:PHA03095 162 SRNA------NVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARivRELIRAGCDPAATDMLGNTPLHSMATGSSC 235
|
170 180 190
....*....|....*....|....*....|
gi 1034606659 237 ETVEV--LLQGGAQPGITDALGQDAAHYGA 264
Cdd:PHA03095 236 KRSLVlpLLIAGISINARNRYGQTPLHYAA 265
|
|
| CusB_dom_1 |
pfam00529 |
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli ... |
857-1000 |
1.99e-05 |
|
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli can be divided into four different domains, the first three domains of the protein are mostly beta-strands and the fourth forms an all alpha-helical domain. This entry represents the first beta-domain (domain 1) of CusB and it is formed by the N and C-terminal ends of the polypeptide (residues 89-102 and 324-385). CusB is part of the copper-transporting efflux system CusCFBA. This domain can also be found in other membrane-fusion proteins, such as HlyD, MdtN, MdtE and AaeA. HlyD is a component of the prototypical alpha-haemolysin (HlyA) bacterial type I secretion system, along with the other components HlyB and TolC. HlyD is anchored in the cytoplasmic membrane by a single transmembrane domain and has a large periplasmic domain within the carboxy-terminal 100 amino acids, HlyB and HlyD form a stable complex that binds the recombinant protein bearing a C-terminal HlyA signal sequence and ATP in the cytoplasm. HlyD, HlyB and TolC combine to form the three-component ABC transporter complex that forms a trans-membrane channel or pore through which HlyA can be transferred directly to the extracellular medium. Cutinase has been shown to be transported effectively through this pore.
Pssm-ID: 425733 [Multi-domain] Cd Length: 322 Bit Score: 48.19 E-value: 1.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 857 DTTQLRAALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARA 936
Cdd:pfam00529 52 DPTDYQAALDSAEAQLAKAQAQVARLQAELDRLQALESELAISRQDYDGATAQLRAAQAAVKAAQAQLAQAQIDLARRRV 131
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1034606659 937 TGEQ---QRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVVPASEHRRLQEEA 1000
Cdd:pfam00529 132 LAPIggiSRESLVTAGALVAQAQANLLATVAQLDQIYVQITQSAAENQAEVRSELSGAQLQIAEAEA 198
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
793-1149 |
2.03e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.91 E-value: 2.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 793 EKLQVELE------TRIRGLEEALRQREREAAAELEAALGKCEAAEAEAGRLRERVreaegsgasGGGGGDTTQLRAALE 866
Cdd:TIGR02169 684 EGLKRELSslqselRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERL---------EELEEDLSSLEQEIE 754
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 867 QAREDLRDRDSRLRELEAASACLDEARAS--RLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTA 944
Cdd:TIGR02169 755 NVKSELKELEARIEELEEDLHKLEEALNDleARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKE 834
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 945 AAELGRARDAAEARVAELPAACEEARQGLAELreasealrqsvvpASEHRRLQEEALELRGRAASLEQEVvatGKEAARL 1024
Cdd:TIGR02169 835 IQELQEQRIDLKEQIKSIEKEIENLNGKKEEL-------------EEELEELEAALRDLESRLGDLKKER---DELEAQL 898
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1025 RAELERERVCSVALSEHERIVGTLQANVAQLEGQLEELGRRH--------EKTSAEVFQVQREALfmkserhaaeaqlat 1096
Cdd:TIGR02169 899 RELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKgedeeipeEELSLEDVQAELQRV--------------- 963
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1034606659 1097 aEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQ 1149
Cdd:TIGR02169 964 -EEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKK 1015
|
|
| FUSC |
pfam04632 |
Fusaric acid resistance protein family; This family includes a conserved region found in two ... |
829-996 |
2.22e-05 |
|
Fusaric acid resistance protein family; This family includes a conserved region found in two proteins associated with fusaric acid resistance, from Burkholderia cepacia and Klebsiella oxytoca. These proteins are likely to be membrane transporter proteins.
Pssm-ID: 428044 [Multi-domain] Cd Length: 655 Bit Score: 48.82 E-value: 2.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 829 EAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAR---EDLRDRDSRLRELEAasacldeaRASRLLAEeeARG 905
Cdd:pfam04632 167 DALRLAAAALAGAPGAEAFEAARLRLAADILALEALRSHAAfesPRGRARARALRRLLA--------RMLALLPR--LRS 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 906 LRAELAQREEARLEQSRELEVLREQLATARATGEQQ---------RTAAAELGRARDAAEARVAELPAACEEARQGLAEL 976
Cdd:pfam04632 237 LARLLARLRTEGAGTVPELAALLDELAAWEAALAAEalqaalaalRARLRALRPALPLDFDTAAELLARLADLLAELAEA 316
|
170 180
....*....|....*....|
gi 1034606659 977 REASEALRQSVVPASEHRRL 996
Cdd:pfam04632 317 LASCRALRHPIAQGARPARL 336
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
860-1181 |
2.23e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 49.18 E-value: 2.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 860 QLRAALEQAREDLRDRDSRLRELeaaSACLDEARASRLLAEEEARGLRAELAQREEArLEQSRELEVLREQLATARATGE 939
Cdd:COG3096 289 ELRRELFGARRQLAEEQYRLVEM---ARELEELSARESDLEQDYQAASDHLNLVQTA-LRQQEKIERYQEDLEELTERLE 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 940 QQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEAL-------RQSVVPASEHRRL-QEEALELRGrAASLE 1011
Cdd:COG3096 365 EQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQqtraiqyQQAVQALEKARALcGLPDLTPEN-AEDYL 443
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1012 QEVVATGKEAARLRAELE-RERVCSVALSEHERIVGTLQANVAQLEgqleelgrrhektSAEVFQVQREALFMKSERHAA 1090
Cdd:COG3096 444 AAFRAKEQQATEEVLELEqKLSVADAARRQFEKAYELVCKIAGEVE-------------RSQAWQTARELLRRYRSQQAL 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1091 EAQLATAEQQLRglrtEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATpEVEALRDQVKDLQQ 1170
Cdd:COG3096 511 AQRLQQLRAQLA----ELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEE-QAAEAVEQRSELRQ 585
|
330
....*....|.
gi 1034606659 1171 QLQEAARDHSS 1181
Cdd:COG3096 586 QLEQLRARIKE 596
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
437-562 |
2.23e-05 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 48.04 E-value: 2.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 437 LERQVQELQQLLVERQEEKESLGREVESLQSRLSLLENERENTSYDVTTLQDEEGELP---DLPGAEVLLSRQLSPSAQE 513
Cdd:PRK09039 58 LNSQIAELADLLSLERQGNQDLQDSVANLRASLSAAEAERSRLQALLAELAGAGAAAEgraGELAQELDSEKQVSARALA 137
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1034606659 514 HLASLQEQVAVLTRQNQELMEKVQILENFEKdETQMEVEALAEVIPLAL 562
Cdd:PRK09039 138 QVELLNQQIAALRRQLAALEAALDASEKRDR-ESQAKIADLGRRLNVAL 185
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
995-1148 |
4.21e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 46.46 E-value: 4.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 995 RLQE---EALELRGRAASLEQEVVATGKEAARLRAELErervcsvalsEHERIVGTLQANVAQLEGQLEELGRRHEKTSA 1071
Cdd:COG1579 11 DLQEldsELDRLEHRLKELPAELAELEDELAALEARLE----------AAKTELEDLEKEIKRLELEIEEVEARIKKYEE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1072 EVFQV--QREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEK-DKKITELSKEVFNLKEALKE 1148
Cdd:COG1579 81 QLGNVrnNKEYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAElEEKKAELDEELAELEAELEE 160
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
889-1174 |
5.13e-05 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 47.64 E-value: 5.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 889 LDEARASRLLAEEEARGLRAELAQRE-----------------EARLEQ-SRELEVLREQLATARA-TGEQQRT------ 943
Cdd:PRK04863 742 PDSFDDSVFSVEELEKAVVVKIADRQwrysrfpevplfgraarEKRIEQlRAEREELAERYATLSFdVQKLQRLhqafsr 821
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 944 ----------------AAAELGRARDAAEARVAELPAACEEARQGLAELREASEALR----QSVVPASEHrrLQEEALEL 1003
Cdd:PRK04863 822 figshlavafeadpeaELRQLNRRRVELERALADHESQEQQQRSQLEQAKEGLSALNrllpRLNLLADET--LADRVEEI 899
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1004 RGRAASLEqevvatgkEAARLRAELERervcsvALSEHERIVGTLQA---NVAQLEGQLEELGRRHEKTSAEVFQ----V 1076
Cdd:PRK04863 900 REQLDEAE--------EAKRFVQQHGN------ALAQLEPIVSVLQSdpeQFEQLKQDYQQAQQTQRDAKQQAFAltevV 965
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1077 QREALFMKSErhaaEAQLATAEQQLR-GLRTEAERARQAQSRAQEALdkaKEKDKKITELSKEVFNLKEALkeqpaalat 1155
Cdd:PRK04863 966 QRRAHFSYED----AAEMLAKNSDLNeKLRQRLEQAEQERTRAREQL---RQAQAQLAQYNQVLASLKSSY--------- 1029
|
330
....*....|....*....
gi 1034606659 1156 pevEALRDQVKDLQQQLQE 1174
Cdd:PRK04863 1030 ---DAKRQMLQELKQELQD 1045
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
793-1113 |
5.34e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 47.43 E-value: 5.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 793 EKLQVELETRIRGLEEalRQREREAAAELEAALGKCEAAEAEAGRL-----RERVREAEGSGASGGGGGDTTQLRAALEQ 867
Cdd:pfam17380 299 ERLRQEKEEKAREVER--RRKLEEAEKARQAEMDRQAAIYAEQERMamereRELERIRQEERKRELERIRQEEIAMEISR 376
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 868 AREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRaelaqreearlEQSRELEVLREQLATARatgeQQRTAAAE 947
Cdd:pfam17380 377 MRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQ-----------QQKVEMEQIRAEQEEAR----QREVRRLE 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 948 LGRARDAAEARVAELpaaceEARQGLAELREASEALRQSVVPASEHRRLQEEALELRGRAasLEQEVvatgkeAARLRAE 1027
Cdd:pfam17380 442 EERAREMERVRLEEQ-----ERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKI--LEKEL------EERKQAM 508
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1028 LERERVCSVALSEHERivgTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQlaTAEQQLRGLRTE 1107
Cdd:pfam17380 509 IEEERKRKLLEKEMEE---RQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEAM--EREREMMRQIVE 583
|
....*.
gi 1034606659 1108 AERARQ 1113
Cdd:pfam17380 584 SEKARA 589
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1038-1176 |
5.39e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 46.07 E-value: 5.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1038 LSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTE---------- 1107
Cdd:COG1579 19 LDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNkeyealqkei 98
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1034606659 1108 ---AERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATpEVEALRDQVKDLQQQLQEAA 1176
Cdd:COG1579 99 eslKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDE-ELAELEAELEELEAEREELA 169
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
865-1174 |
5.59e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 47.64 E-value: 5.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 865 LEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQRE-----------------EARLEQ-SRELEV 926
Cdd:COG3096 717 LSAVKEQLAGLEDCPEDLYLIEGDPDSFDDSVFDAEELEDAVVVKLSDRQwrysrfpevplfgraarEKRLEElRAERDE 796
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 927 LREQLATARA-TGEQQRTAA----------------------AELGRARDAAEARVAELPAACEEARQGLAELREASEAL 983
Cdd:COG3096 797 LAEQYAKASFdVQKLQRLHQafsqfvgghlavafapdpeaelAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQLQLL 876
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 984 RQsVVPASEHrrLQEEALELRGRAAsleQEVVATGKEAARLRAElerervCSVALSEHERIVGTLQ---ANVAQLEGQLE 1060
Cdd:COG3096 877 NK-LLPQANL--LADETLADRLEEL---REELDAAQEAQAFIQQ------HGKALAQLEPLVAVLQsdpEQFEQLQADYL 944
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1061 ELGRRHEKTSAEVFQ----VQREALFMKSErhaAEAQLATAEQQLRGLRTEAERARQAQSRAQEALdkaKEKDKKITELS 1136
Cdd:COG3096 945 QAKEQQRRLKQQIFAlsevVQRRPHFSYED---AVGLLGENSDLNEKLRARLEQAEEARREAREQL---RQAQAQYSQYN 1018
|
330 340 350
....*....|....*....|....*....|....*...
gi 1034606659 1137 KEVFNLKEALkeqpaalatpevEALRDQVKDLQQQLQE 1174
Cdd:COG3096 1019 QVLASLKSSR------------DAKQQTLQELEQELEE 1044
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
877-1046 |
5.84e-05 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 47.38 E-value: 5.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 877 SRLR-ELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSR-ELEVLREQLATARATGEQQRTAAAELGRARDA 954
Cdd:COG0542 400 ARVRmEIDSKPEELDELERRLEQLEIEKEALKKEQDEASFERLAELRdELAELEEELEALKARWEAEKELIEEIQELKEE 479
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 955 AEARVAELPAACEEARQGLAELREASEALRQSVVPasehrrlQEEAlelrgraasleqEVVA--TGKEAARLRAElERER 1032
Cdd:COG0542 480 LEQRYGKIPELEKELAELEEELAELAPLLREEVTE-------EDIA------------EVVSrwTGIPVGKLLEG-EREK 539
|
170
....*....|....*.
gi 1034606659 1033 VcsVALSE--HERIVG 1046
Cdd:COG0542 540 L--LNLEEelHERVIG 553
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
787-1178 |
6.67e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 47.37 E-value: 6.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 787 GAAEASEKLQVELETRIRGLEEALRQREREAAAELeaalgKCEAAEAEAGRLRE-RVREAEGSGASGGGGGDTTQLRAAL 865
Cdd:PRK03918 252 GSKRKLEEKIRELEERIEELKKEIEELEEKVKELK-----ELKEKAEEYIKLSEfYEEYLDELREIEKRLSRLEEEINGI 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 866 EQAREDLRDRDSRLREL---------------------EAASACLDEARA-SRLLAEEEARGLRAELAQREEARLEQSRE 923
Cdd:PRK03918 327 EERIKELEEKEERLEELkkklkelekrleeleerhelyEEAKAKKEELERlKKRLTGLTPEKLEKELEELEKAKEEIEEE 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 924 LEVLREQLATARATGEQQRTAAAELGRA--------RDAAE-----------ARVAELPAACEEARQGLAELREASEALR 984
Cdd:PRK03918 407 ISKITARIGELKKEIKELKKAIEELKKAkgkcpvcgRELTEehrkelleeytAELKRIEKELKEIEEKERKLRKELRELE 486
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 985 QSVVPASEHRRLQEEALELRGRAASLE------------------QEVVATGKEAARLRAELERERVCSVALSEHERIVG 1046
Cdd:PRK03918 487 KVLKKESELIKLKELAEQLKELEEKLKkynleelekkaeeyeklkEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLD 566
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1047 TLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQaqsRAQEALDKAK 1126
Cdd:PRK03918 567 ELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFE---ELAETEKRLE 643
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1034606659 1127 EKDKKITELSKEvFNLKE--ALKEQPAALATpEVEALRDQVKDLQQQLQEAARD 1178
Cdd:PRK03918 644 ELRKELEELEKK-YSEEEyeELREEYLELSR-ELAGLRAELEELEKRREEIKKT 695
|
|
| PLN03237 |
PLN03237 |
DNA topoisomerase 2; Provisional |
488-721 |
7.07e-05 |
|
DNA topoisomerase 2; Provisional
Pssm-ID: 215641 [Multi-domain] Cd Length: 1465 Bit Score: 47.55 E-value: 7.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 488 DEEGELPDLPgaEVLLSRQLSPSAQEHLASLQeqVAVLTrqnqelMEKVQILENfEKDETQMEVEALAEVIPLALY---- 563
Cdd:PLN03237 1090 DDAAEEEEEI--DVSSSSGVRGSDYDYLLSMA--IGTLT------LEKVQELCA-DRDKLNIEVEDLKKTTPKSLWlkdl 1158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 564 DSLRAEFDQLRRQHAEALQALRQQetrevprEEGAACGESEvAGATATKNGPThmelngsvAPETKVNGAETIDEEAAgD 643
Cdd:PLN03237 1159 DALEKELDKLDKEDAKAEEAREKL-------QRAAARGESG-AAKKVSRQAPK--------KPAPKKTTKKASESETT-E 1221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 644 ETMEARTMEAEATGAEA-----TGAEATGAKVTETKPTGAEVREMETTEEEANMETKPTGAQATDTETTGVEAMGVEATK 718
Cdd:PLN03237 1222 ETYGSSAMETENVAEVVkpkgrAGAKKKAPAAAKEKEEEDEILDLKDRLAAYNLDSAPAQSAKMEETVKAVPARRAAARK 1301
|
...
gi 1034606659 719 TKA 721
Cdd:PLN03237 1302 KPL 1304
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
148-210 |
8.03e-05 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 41.49 E-value: 8.03e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1034606659 148 GWTALHHAetgshcvgpAAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMCHTDLCRLLL 210
Cdd:pfam13637 1 ELTALHAA---------AASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
869-987 |
9.30e-05 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 46.11 E-value: 9.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 869 REDLRDRDSRLRELEAASACLDEARAsrlLAEEEARGLRAELAQreearleqsrelevLREQLATARATGEQQRTAAAEL 948
Cdd:PRK09039 45 SREISGKDSALDRLNSQIAELADLLS---LERQGNQDLQDSVAN--------------LRASLSAAEAERSRLQALLAEL 107
|
90 100 110
....*....|....*....|....*....|....*....
gi 1034606659 949 GRARDAAEARVAELPAACEEARQGLAELREASEALRQSV 987
Cdd:PRK09039 108 AGAGAAAEGRAGELAQELDSEKQVSARALAQVELLNQQI 146
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
858-1080 |
9.93e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 46.87 E-value: 9.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 858 TTQLRAALEQAREDLrdrdSRLRELEAASACLDEARAsrllaEEEARGLRAELAQREEARL---EQSRELEVLREQLATA 934
Cdd:COG3096 859 EQQLRQQLDQLKEQL----QLLNKLLPQANLLADETL-----ADRLEELREELDAAQEAQAfiqQHGKALAQLEPLVAVL 929
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 935 RATGEQQRTAAAELGRA---RDAAEAR-------VAELPA-ACEEARQGLAELREASEALRQSVVPASEHRRLQEEALE- 1002
Cdd:COG3096 930 QSDPEQFEQLQADYLQAkeqQRRLKQQifalsevVQRRPHfSYEDAVGLLGENSDLNEKLRARLEQAEEARREAREQLRq 1009
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1003 --------------LRGRA-------ASLEQEVVATGKEA---ARLRAELERERVCSvALSEHERIVGTLQANVAQLEGQ 1058
Cdd:COG3096 1010 aqaqysqynqvlasLKSSRdakqqtlQELEQELEELGVQAdaeAEERARIRRDELHE-ELSQNRSRRSQLEKQLTRCEAE 1088
|
250 260
....*....|....*....|..
gi 1034606659 1059 LEELGRRHEKTSAEVFQVQREA 1080
Cdd:COG3096 1089 MDSLQKRLRKAERDYKQEREQV 1110
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
437-592 |
1.00e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.83 E-value: 1.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 437 LERQVQELQQLLVERQEEKESLGREVESLQSRLSLLENERENTSYDVTTLQDEEGELPDLPGAEVLLSRQLSPSAQEHLA 516
Cdd:COG4913 690 LEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRE 769
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 517 SLQEQVAVLTRQNQELMEK-VQILENF------EKDETQMEVEALAEVipLALYDSLRAefDQLRRQHAEALQALRQQET 589
Cdd:COG4913 770 NLEERIDALRARLNRAEEElERAMRAFnrewpaETADLDADLESLPEY--LALLDRLEE--DGLPEYEERFKELLNENSI 845
|
...
gi 1034606659 590 REV 592
Cdd:COG4913 846 EFV 848
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
790-985 |
1.06e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.55 E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 790 EASEKLQVELETRIRGLEEALRQrereaaaeleaalgkceaAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAR 869
Cdd:COG3206 171 EEARKALEFLEEQLPELRKELEE------------------AEAALEEFRQKNGLVDLSEEAKLLLQQLSELESQLAEAR 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 870 EDLRDRDSRLRELEAASAcLDEARASRLLAEEEARGLRAELAQREEARLEQSR-------ELEVLREQLATARATGEQQ- 941
Cdd:COG3206 233 AELAEAEARLAALRAQLG-SGPDALPELLQSPVIQQLRAQLAELEAELAELSArytpnhpDVIALRAQIAALRAQLQQEa 311
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1034606659 942 RTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQ 985
Cdd:COG3206 312 QRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRR 355
|
|
| PHA02876 |
PHA02876 |
ankyrin repeat protein; Provisional |
50-255 |
1.84e-04 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165207 [Multi-domain] Cd Length: 682 Bit Score: 45.82 E-value: 1.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 50 ERLLQavennDAPRVAALIARKGLVPTKLDPEGKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYGHPQ 129
Cdd:PHA02876 151 ERIQQ-----DELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNID 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 130 CLKQLLQASCVVDVVDSSGWTALHHAEtgshcvgpaaggcLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMchTDLCRL- 208
Cdd:PHA02876 226 TIKAIIDNRSNINKNDLSLLKAIRNED-------------LETSLLLYDAGFSVNSIDDCKNTPLHHASQA--PSLSRLv 290
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1034606659 209 --LLQQGAAANDQDLQGRTAL-MLACEGASPETVEVLLQGGAQPGITDAL 255
Cdd:PHA02876 291 pkLLERGADVNAKNIKGETPLyLMAKNGYDTENIRTLIMLGADVNAADRL 340
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
434-598 |
2.06e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.68 E-value: 2.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 434 LHILERQVQELQQLLVERQEEKESLGREVESLQSRLSLLEN--ERENTSYDVTTLQDEEGELpdlpgaEVLLSRQLSPS- 510
Cdd:COG4913 612 LAALEAELAELEEELAEAEERLEALEAELDALQERREALQRlaEYSWDEIDVASAEREIAEL------EAELERLDASSd 685
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 511 ----AQEHLASLQEQVAVLTRQNQELMEKVQILEN------FEKDETQMEVEALAEVIPLALYDSLRAEFDQL-----RR 575
Cdd:COG4913 686 dlaaLEEQLEELEAELEELEEELDELKGEIGRLEKeleqaeEELDELQDRLEAAEDLARLELRALLEERFAAAlgdavER 765
|
170 180
....*....|....*....|...
gi 1034606659 576 QHAEALQALRQQETREVPREEGA 598
Cdd:COG4913 766 ELRENLEERIDALRARLNRAEEE 788
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
860-1203 |
2.16e-04 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 45.33 E-value: 2.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 860 QLRAALEQAREDLRD-RDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARleqsRELEVLREQLATARATg 938
Cdd:COG5185 250 QTSDKLEKLVEQNTDlRLEKLGENAESSKRLNENANNLIKQFENTKEKIAEYTKSIDIK----KATESLEEQLAAAEAE- 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 939 eqqrtaaAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVVPASEHRRLQEEALELRGRAASLEQEVVATG 1018
Cdd:COG5185 325 -------QELEESKRETETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEVELSKSSEELDSFKDTIESTKESLDEIP 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1019 KEAARLRAELERervcsvalseherivgTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEaQLATAE 1098
Cdd:COG5185 398 QNQRGYAQEILA----------------TLEDTLKAADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVM-READEE 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1099 QQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQpaalatpeVEALRDQVKDLQQQLQEAARD 1178
Cdd:COG5185 461 SQSRLEEAYDEINRSVRSKKEDLNEELTQIESRVSTLKATLEKLRAKLERQ--------LEGVRSKLDQVAESLKDFMRA 532
|
330 340
....*....|....*....|....*...
gi 1034606659 1179 HSSVVALYRS---HLLYAIQGQMDEDVQ 1203
Cdd:COG5185 533 RGYAHILALEnliPASELIQASNAKTDG 560
|
|
| COG3903 |
COG3903 |
Predicted ATPase [General function prediction only]; |
831-1122 |
2.21e-04 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443109 [Multi-domain] Cd Length: 933 Bit Score: 45.78 E-value: 2.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 831 AEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAREDLRDRDSRLRELEAASACLDEARA------SRLLAEEEAR 904
Cdd:COG3903 487 RAAARRRHADYYLALAERAAAELRGPDQLAWLARLDAEHDNLRAALRWALAHGDAELALRLAAAlapfwfLRGLLREGRR 566
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 905 GLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALR 984
Cdd:COG3903 567 WLERALAAAGEAAAALAAAAALAAAAAAARAAAAAAAAAAAAAAAAAAAAAAAAAALLLLAALAAAAAAAAAAAAAAAAA 646
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 985 QSVVPASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERERVCSVALSEHERIVGTLQANVAQLEGQLEELGR 1064
Cdd:COG3903 647 AAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAAAAAAAAALAAAAAALAAAAAAAALAAAAAAALAAAAAAAAAAAAAAA 726
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1034606659 1065 RHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEAL 1122
Cdd:COG3903 727 LLAAAAAAALAAAAAAAALALAAAAAAAAAAAAAAALAAAAAAAALAALLLALAAAAA 784
|
|
| RecN |
COG0497 |
DNA repair ATPase RecN [Replication, recombination and repair]; |
863-1139 |
2.28e-04 |
|
DNA repair ATPase RecN [Replication, recombination and repair];
Pssm-ID: 440263 [Multi-domain] Cd Length: 555 Bit Score: 45.45 E-value: 2.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 863 AALEQAREDLRDRDSRLRELEAAsacLDEARASRLLAEEEARGLRAELAQREEARL---EQSrELEVLREQLATARATGE 939
Cdd:COG0497 151 AGLEELLEEYREAYRAWRALKKE---LEELRADEAERARELDLLRFQLEELEAAALqpgEEE-ELEEERRRLSNAEKLRE 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 940 QQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVVpasehrRLQEEALELRGRAASLEQevvatgk 1019
Cdd:COG0497 227 ALQEALEALSGGEGGALDLLGQALRALERLAEYDPSLAELAERLESALI------ELEEAASELRRYLDSLEF------- 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1020 EAARLrAELErervcsvalsehERIvgtlqanvaqleGQLEELGRRHEKTSAEVFQVQREAlfmkserhAAE-AQLATAE 1098
Cdd:COG0497 294 DPERL-EEVE------------ERL------------ALLRRLARKYGVTVEELLAYAEEL--------RAElAELENSD 340
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1034606659 1099 QQLRGLRTEAERARQAQSRAQEALDKAKEkdKKITELSKEV 1139
Cdd:COG0497 341 ERLEELEAELAEAEAELLEAAEKLSAARK--KAAKKLEKAV 379
|
|
| hsdR |
PRK11448 |
type I restriction enzyme EcoKI subunit R; Provisional |
1053-1146 |
2.47e-04 |
|
type I restriction enzyme EcoKI subunit R; Provisional
Pssm-ID: 236912 [Multi-domain] Cd Length: 1123 Bit Score: 45.33 E-value: 2.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1053 AQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAErarQAQSRAQEALDKAKEKDKKI 1132
Cdd:PRK11448 145 HALQQEVLTLKQQLELQAREKAQSQALAEAQQQELVALEGLAAELEEKQQELEAQLE---QLQEKAAETSQERKQKRKEI 221
|
90
....*....|....
gi 1034606659 1133 TELSKEVFNLKEAL 1146
Cdd:PRK11448 222 TDQAAKRLELSEEE 235
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
863-1177 |
2.62e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 45.33 E-value: 2.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 863 AALEQAREDLRDRDS---RLRELEAASACLDEARaSRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGE 939
Cdd:COG3096 492 QAWQTARELLRRYRSqqaLAQRLQQLRAQLAELE-QRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELE 570
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 940 QQ----RTAAAELGRARDAAEARVAELPA---ACEEARQGLAELREAS-EAL--RQSVVPASEH-----RRLQEEALELR 1004
Cdd:COG3096 571 EQaaeaVEQRSELRQQLEQLRARIKELAArapAWLAAQDALERLREQSgEALadSQEVTAAMQQllereREATVERDELA 650
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1005 GRAASLEQEV----VATGKEAARLRAEleRERVCSVALSE---------------------HERIVGTLQANVAQLEG-- 1057
Cdd:COG3096 651 ARKQALESQIerlsQPGGAEDPRLLAL--AERLGGVLLSEiyddvtledapyfsalygparHAIVVPDLSAVKEQLAGle 728
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1058 ----------------------------------------------------------------QLEELGRRHEKTSAEV 1073
Cdd:COG3096 729 dcpedlyliegdpdsfddsvfdaeeledavvvklsdrqwrysrfpevplfgraarekrleelraERDELAEQYAKASFDV 808
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1074 FQVQR--EAL--FMKSERHAA-----EAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKdkkitelskevFNLKE 1144
Cdd:COG3096 809 QKLQRlhQAFsqFVGGHLAVAfapdpEAELAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQ-----------LQLLN 877
|
410 420 430
....*....|....*....|....*....|...
gi 1034606659 1145 ALKEQPAALATPEVEALRDQVKDLQQQLQEAAR 1177
Cdd:COG3096 878 KLLPQANLLADETLADRLEELREELDAAQEAQA 910
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
900-1173 |
2.87e-04 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 44.52 E-value: 2.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 900 EEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREA 979
Cdd:COG1340 14 EEKIEELREEIEELKEKRDELNEELKELAEKRDELNAQVKELREEAQELREKRDELNEKVKELKEERDELNEKLNELREE 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 980 sealrqsvvpASEHRRLQEEALELRGRAASLEQEVvatgkeaarlrAELERERVCSVALSEHERivgTLQANVAQLEGQL 1059
Cdd:COG1340 94 ----------LDELRKELAELNKAGGSIDKLRKEI-----------ERLEWRQQTEVLSPEEEK---ELVEKIKELEKEL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1060 EELGRRHEK--------TSAEVFQVQREALFMKSERHAAEAQLATAE-QQLRGLRTE-AERARQAQSRAQEALDKAKEKD 1129
Cdd:COG1340 150 EKAKKALEKneklkelrAELKELRKEAEEIHKKIKELAEEAQELHEEmIELYKEADElRKEADELHKEIVEAQEKADELH 229
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1034606659 1130 KKITELSKEVFNLKEALKE----QPAALATPEVEALRDQVKDLQQQLQ 1173
Cdd:COG1340 230 EEIIELQKELRELRKELKKlrkkQRALKREKEKEELEEKAEEIFEKLK 277
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
859-1148 |
3.06e-04 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 45.04 E-value: 3.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 859 TQLRAALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARG---------------------LRAELAQREEAR 917
Cdd:PRK10929 140 SQLPQQQTEARRQLNEIERRLQTLGTPNTPLAQAQLTALQAESAALKalvdelelaqlsannrqelarLRSELAKKRSQQ 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 918 LEQsrELEVLREQLATARatgeqQRTAAAELGRARDAAEaRVAELPAACEEArqgLAELREASEALRQSV----VPASEH 993
Cdd:PRK10929 220 LDA--YLQALRNQLNSQR-----QREAERALESTELLAE-QSGDLPKSIVAQ---FKINRELSQALNQQAqrmdLIASQQ 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 994 RRLQEEALELRgraasleqEVVATGKEAARLRAElerervcSVALSEherivgTLQANVA---------QLEGQLEELgr 1064
Cdd:PRK10929 289 RQAASQTLQVR--------QALNTLREQSQWLGV-------SNALGE------ALRAQVArlpempkpqQLDTEMAQL-- 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1065 rhektsaevfQVQR---EALFmksERHAAEAQLATAEQQlrGLRTEAERARQAQSRAQEALDKA--KEKDKKITELSK-E 1138
Cdd:PRK10929 346 ----------RVQRlryEDLL---NKQPQLRQIRQADGQ--PLTAEQNRILDAQLRTQRELLNSllSGGDTLILELTKlK 410
|
330
....*....|..
gi 1034606659 1139 VFN--LKEALKE 1148
Cdd:PRK10929 411 VANsqLEDALKE 422
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
895-1218 |
3.35e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 45.17 E-value: 3.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 895 SRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLAtaratgEQQRTAAAELGRARDAAEARVAELpAACEEARQGLA 974
Cdd:pfam01576 202 GRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLA------KKEEELQAALARLEEETAQKNNAL-KKIRELEAQIS 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 975 ELREASEALRQSVVPASEHRRLQEEALELRGRAASLEQEVVATGKEaarLRAELERErvcsvaLSEHERivgTLQANVAQ 1054
Cdd:pfam01576 275 ELQEDLESERAARNKAEKQRRDLGEELEALKTELEDTLDTTAAQQE---LRSKREQE------VTELKK---ALEEETRS 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1055 LEGQLEELGRRH----EKTSAEVFQVQREALFMKSERHAAE---AQLATAEQQLRGLRTEAERARQA--------QSRAQ 1119
Cdd:pfam01576 343 HEAQLQEMRQKHtqalEELTEQLEQAKRNKANLEKAKQALEsenAELQAELRTLQQAKQDSEHKRKKlegqlqelQARLS 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1120 EALDKAKEKDKKITELSKEVFNLKEALK--EQPAALATPEVEALRDQVKDLQQQLQEAARDHSSVVALYRS--HLLYAIQ 1195
Cdd:pfam01576 423 ESERQRAELAEKLSKLQSELESVSSLLNeaEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQleDERNSLQ 502
|
330 340
....*....|....*....|...
gi 1034606659 1196 GQMDEDVQRILSQILQMQRLQAQ 1218
Cdd:pfam01576 503 EQLEEEEEAKRNVERQLSTLQAQ 525
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
857-1163 |
3.49e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.95 E-value: 3.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 857 DTTQLRAALEQAREDLrdrdSRLRELEAASACLDEARASRLLAEEEARGLRAELA----QREEARLEQ-SRELEVLR--- 928
Cdd:PRK04863 859 QEQQQRSQLEQAKEGL----SALNRLLPRLNLLADETLADRVEEIREQLDEAEEAkrfvQQHGNALAQlEPIVSVLQsdp 934
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 929 EQLATARATGEQ----QRTAAAelgRARDAAE--ARVAELpaACEEARQGLAELREASEALRQSVVPASEHRRLQEEalE 1002
Cdd:PRK04863 935 EQFEQLKQDYQQaqqtQRDAKQ---QAFALTEvvQRRAHF--SYEDAAEMLAKNSDLNEKLRQRLEQAEQERTRARE--Q 1007
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1003 LRGRAASLEQevvatgkeAARLRAELErervcsvalSEHErivgTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALF 1082
Cdd:PRK04863 1008 LRQAQAQLAQ--------YNQVLASLK---------SSYD----AKRQMLQELKQELQDLGVPADSGAEERARARRDELH 1066
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1083 M-----KSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPE 1157
Cdd:PRK04863 1067 ArlsanRSRRNQLEKQLTFCEAEMDNLTKKLRKLERDYHEMREQVVNAKAGWCAVLRLVKDNGVERRLHRRELAYLSADE 1146
|
....*.
gi 1034606659 1158 VEALRD 1163
Cdd:PRK04863 1147 LRSMSD 1152
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
880-1146 |
4.35e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 44.78 E-value: 4.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 880 RELEAASACLDEARASRLLAEEEARGLRAELAQREE---ARLEQSRELEVLREQLATARATGEQQRTAAAELGRArdaAE 956
Cdd:pfam01576 812 RELEEARASRDEILAQSKESEKKLKNLEAELLQLQEdlaASERARRQAQQERDELADEIASGASGKSALQDEKRR---LE 888
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 957 ARVAELPAACEEArQGLAELreASEALRQSVVPASEhrrLQEEALELRGRAASLEQEVVATGKEAARLRAELERERvcSV 1036
Cdd:pfam01576 889 ARIAQLEEELEEE-QSNTEL--LNDRLRKSTLQVEQ---LTTELAAERSTSQKSESARQQLERQNKELKAKLQEME--GT 960
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1037 ALSEHERIVGTLQANVAQLEGQLEE----------LGRRHEKTSAEVF-QVQ---REALFMKSERHAAEAQLATAEQQLR 1102
Cdd:pfam01576 961 VKSKFKSSIAALEAKIAQLEEQLEQesrerqaankLVRRTEKKLKEVLlQVEderRHADQYKDQAEKGNSRMKQLKRQLE 1040
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1034606659 1103 GLRTEAERARQAQSRAQEALDKAKEKDKKiteLSKEVFNLKEAL 1146
Cdd:pfam01576 1041 EAEEEASRANAARRKLQRELDDATESNES---MNREVSTLKSKL 1081
|
|
| PHA02878 |
PHA02878 |
ankyrin repeat protein; Provisional |
82-253 |
4.43e-04 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222939 [Multi-domain] Cd Length: 477 Bit Score: 44.49 E-value: 4.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 82 GKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYGHPQCLKQLLQASCVVDVVDSSGWTALHHaetgshc 161
Cdd:PHA02878 168 GNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHI------- 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 162 vgpAAGGCLScsevlcsfkahlnpqdrsgatpliiaaqmchTDLCRLLLQQGAAANDQD-LQGRTALMLACEgaSPETVE 240
Cdd:PHA02878 241 ---SVGYCKD-------------------------------YDILKLLLEHGVDVNAKSyILGLTALHSSIK--SERKLK 284
|
170
....*....|...
gi 1034606659 241 VLLQGGAQPGITD 253
Cdd:PHA02878 285 LLLEYGADINSLN 297
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1016-1178 |
4.92e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.52 E-value: 4.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1016 ATGKEAARLRAELERervcsvaLSEHERIVGTLQANVAQLEgQLEELGRRHEKTSAE------------VFQVQREALFM 1083
Cdd:COG4913 222 DTFEAADALVEHFDD-------LERAHEALEDAREQIELLE-PIRELAERYAAARERlaeleylraalrLWFAQRRLELL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1084 KSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAkeKDKKITELSKEVFNLKEALKEQ-------------- 1149
Cdd:COG4913 294 EAELEELRAELARLEAELERLEARLDALREELDELEAQIRGN--GGDRLEQLEREIERLERELEERerrrarleallaal 371
|
170 180 190
....*....|....*....|....*....|.
gi 1034606659 1150 --PAALATPEVEALRDQVKDLQQQLQEAARD 1178
Cdd:COG4913 372 glPLPASAEEFAALRAEAAALLEALEEELEA 402
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
786-991 |
5.11e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 5.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 786 PGAAEASEKLQVELEtRIRGLEEALRQREREAAAELEAALGKCEAAEAEAGRLRERVREAEGSGASGGGGGDTTQ----- 860
Cdd:COG4942 16 AAQADAAAEAEAELE-QLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEkeiae 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 861 LRAALEQAREDLRD---------RDSRLRELEAASACLDEARASRLLAE---------EEARGLRAELAQREEARLEQSR 922
Cdd:COG4942 95 LRAELEAQKEELAEllralyrlgRQPPLALLLSPEDFLDAVRRLQYLKYlaparreqaEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1034606659 923 ELEVLREQLATARATGEQQR----TAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVVPAS 991
Cdd:COG4942 175 ELEALLAELEEERAALEALKaerqKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAG 247
|
|
| growth_prot_Scy |
NF041483 |
polarized growth protein Scy; |
868-1134 |
5.69e-04 |
|
polarized growth protein Scy;
Pssm-ID: 469371 [Multi-domain] Cd Length: 1293 Bit Score: 44.43 E-value: 5.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 868 AREDLRDRDSRLRELEA-ASACLDEAR---ASRLLAEEEARGLRAELAQREEARL--EQSRELEVLREQ----LATARAT 937
Cdd:NF041483 263 AEQRMQEAEEALREARAeAEKVVAEAKeaaAKQLASAESANEQRTRTAKEEIARLvgEATKEAEALKAEaeqaLADARAE 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 938 GEQQRTAAAELGRARdAAEARVAELPAAceeARQGLAELREASEALRQSVVPASEH-----RRLQEEALELRGRAASLEQ 1012
Cdd:NF041483 343 AEKLVAEAAEKARTV-AAEDTAAQLAKA---ARTAEEVLTKASEDAKATTRAAAEEaerirREAEAEADRLRGEAADQAE 418
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1013 EVVATGK---------------EAARLRAELERERvcSVALSEHERIVGTLQANVAQlegQLEELGRRHE----KTSAEV 1073
Cdd:NF041483 419 QLKGAAKddtkeyraktvelqeEARRLRGEAEQLR--AEAVAEGERIRGEARREAVQ---QIEEAARTAEelltKAKADA 493
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1034606659 1074 FQVqREALFMKSERHAAEA-QLAT-----AEQQLRGLRTEAERAR-QAQSRAQEALDKAKEKDKKITE 1134
Cdd:NF041483 494 DEL-RSTATAESERVRTEAiERATtlrrqAEETLERTRAEAERLRaEAEEQAEEVRAAAERAARELRE 560
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
223-275 |
7.27e-04 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 38.79 E-value: 7.27e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 1034606659 223 GRTALMLACEGASPETVEVLLQGGAQPGITDALGQDAAHYGALAGDKLILHLL 275
Cdd:pfam13637 1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLL 53
|
|
| WEMBL |
pfam05701 |
Weak chloroplast movement under blue light; WEMBL consists of several plant proteins required ... |
881-1177 |
7.44e-04 |
|
Weak chloroplast movement under blue light; WEMBL consists of several plant proteins required for the chloroplast avoidance response under high intensity blue light. This avoidance response consists in the relocation of chloroplasts on the anticlinal side of exposed cells. Acts in association with PMI2 to maintain the velocity of chloroplast photo-relocation movement via the regulation of cp-actin filaments. Thus several member-sequences are described as "myosin heavy chain-like".
Pssm-ID: 461718 [Multi-domain] Cd Length: 562 Bit Score: 43.86 E-value: 7.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 881 ELEAASACLDEARASRLLAEEeaRGLRAELAQRE-----EARLEQS-RELEVLREQLATARATGEQQRTAAAELGRARDA 954
Cdd:pfam05701 188 ELIATKESLESAHAAHLEAEE--HRIGAALAREQdklnwEKELKQAeEELQRLNQQLLSAKDLKSKLETASALLLDLKAE 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 955 AEARVAelpAACEEARQGLAELREASEALRQSVVPAsehrrlQEEALELRGRAASLEQEVVATGKEAARLRAELERERVC 1034
Cdd:pfam05701 266 LAAYME---SKLKEEADGEGNEKKTSTSIQAALASA------KKELEEVKANIEKAKDEVNCLRVAAASLRSELEKEKAE 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1035 SVALSEHErivGTLQANVAQLEgqlEELGRrhektsaevfqVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQA 1114
Cdd:pfam05701 337 LASLRQRE---GMASIAVSSLE---AELNR-----------TKSEIALVQAKEKEAREKMVELPKQLQQAAQEAEEAKSL 399
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1034606659 1115 QSRAQEALDKAKEK-DKKITELSKEVFNLKEALKEQPAA-----LATPEVEALRDQVKDLQQQLQEAAR 1177
Cdd:pfam05701 400 AQAAREELRKAKEEaEQAKAAASTVESRLEAVLKEIEAAkasekLALAAIKALQESESSAESTNQEDSP 468
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
908-1062 |
8.14e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.60 E-value: 8.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 908 AELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAEL---REASEALR 984
Cdd:COG1579 17 SELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVrnnKEYEALQK 96
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1034606659 985 QSVVPASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERERvcsvalSEHERIVGTLQANVAQLEGQLEEL 1062
Cdd:COG1579 97 EIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKK------AELDEELAELEAELEELEAEREEL 168
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
865-1040 |
8.99e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 43.79 E-value: 8.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 865 LEQAREDLRDRDSRLRELEAASACLDEA--RASRLLAEEEArgLRAELAQREEARLEQSRELEVLREQLATARATGEQQR 942
Cdd:PRK04863 515 LQQLRMRLSELEQRLRQQQRAERLLAEFckRLGKNLDDEDE--LEQLQEELEARLESLSESVSEARERRMALRQQLEQLQ 592
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 943 TAAAELGRARD---AAEARVAEL----------PAACEEARQGLAE-LREASEALRQSvvpASEHRRLQEEALELRGRAA 1008
Cdd:PRK04863 593 ARIQRLAARAPawlAAQDALARLreqsgeefedSQDVTEYMQQLLErERELTVERDEL---AARKQALDEEIERLSQPGG 669
|
170 180 190
....*....|....*....|....*....|..
gi 1034606659 1009 SleqevvatgkEAARLRAelERERVCSVALSE 1040
Cdd:PRK04863 670 S----------EDPRLNA--LAERFGGVLLSE 689
|
|
| PRK07735 |
PRK07735 |
NADH-quinone oxidoreductase subunit C; |
874-1129 |
9.62e-04 |
|
NADH-quinone oxidoreductase subunit C;
Pssm-ID: 236081 [Multi-domain] Cd Length: 430 Bit Score: 43.05 E-value: 9.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 874 DRDSRLRELEAASACLDEARAsRLLAEEEARGLRAELAQREEARLEQSRELEVLREQlatARATGEQQRTAAAELGRARD 953
Cdd:PRK07735 4 EKDLEDLKKEAARRAKEEARK-RLVAKHGAEISKLEEENREKEKALPKNDDMTIEEA---KRRAAAAAKAKAAALAKQKR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 954 AA------EARVAELPAACEEARQGLAELREASEALRQSVVPASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAE 1027
Cdd:PRK07735 80 EGteevteEEKAKAKAKAAAAAKAKAAALAKQKREGTEEVTEEEKAAAKAKAAAAAKAKAAALAKQKREGTEEVTEEEEE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1028 LERERVCSVALSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVfqvqREALFMKSERHAAEAQLATAEQQLRGLRTE 1107
Cdd:PRK07735 160 TDKEKAKAKAAAAAKAKAAALAKQKAAEAGEGTEEVTEEEKAKAKA----KAAAAAKAKAAALAKQKASQGNGDSGDEDA 235
|
250 260
....*....|....*....|..
gi 1034606659 1108 AERARQAQSRAQEALDKAKEKD 1129
Cdd:PRK07735 236 KAKAIAAAKAKAAAAARAKTKG 257
|
|
| Ank_5 |
pfam13857 |
Ankyrin repeats (many copies); |
67-122 |
9.79e-04 |
|
Ankyrin repeats (many copies);
Pssm-ID: 433530 [Multi-domain] Cd Length: 56 Bit Score: 38.48 E-value: 9.79e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1034606659 67 LIARKGLVPTKLDPEGKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLA 122
Cdd:pfam13857 1 LLEHGPIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
|
|
| PTZ00322 |
PTZ00322 |
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional |
165-243 |
1.10e-03 |
|
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Pssm-ID: 140343 [Multi-domain] Cd Length: 664 Bit Score: 43.35 E-value: 1.10e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1034606659 165 AAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMCHTDLCRLLLQQGAAANDQDLQGRTALMLACEGASPETVEVLL 243
Cdd:PTZ00322 90 AASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLS 168
|
|
| YqiK |
COG2268 |
Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown]; |
1019-1162 |
1.16e-03 |
|
Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown];
Pssm-ID: 441869 [Multi-domain] Cd Length: 439 Bit Score: 42.94 E-value: 1.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1019 KEAARLRAELERERvcSVALSEHERivgtlQANVAQLEGQLEELGRRHEKTSAEVfQVQREALFMKSERHAAEAQLATAE 1098
Cdd:COG2268 199 RDARIAEAEAERET--EIAIAQANR-----EAEEAELEQEREIETARIAEAEAEL-AKKKAEERREAETARAEAEAAYEI 270
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1034606659 1099 QQLRGLRtEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALR 1162
Cdd:COG2268 271 AEANAER-EVQRQLEIAEREREIELQEKEAEREEAELEADVRKPAEAEKQAAEAEAEAEAEAIR 333
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
859-1140 |
1.22e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 43.19 E-value: 1.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 859 TQLRAALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQL--ATARA 936
Cdd:pfam05557 69 EALREQAELNRLKKKYLEALNKKLNEKESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLdlLKAKA 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 937 TGEQQRTAAAELG-RARDAAEARVAELPAACEEARQGLAELREASEALRQSVVPASEHRRLQEEALELRgraaSLEQEVV 1015
Cdd:pfam05557 149 SEAEQLRQNLEKQqSSLAEAEQRIKELEFEIQSQEQDSEIVKNSKSELARIPELEKELERLREHNKHLN----ENIENKL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1016 ATGKEAARLRAELER-----ERVCSVALsEHERIVGTLQA--NVAQLEGQleELgRRHEKTSAEVFQVQREALFMKSERH 1088
Cdd:pfam05557 225 LLKEEVEDLKRKLEReekyrEEAATLEL-EKEKLEQELQSwvKLAQDTGL--NL-RSPEDLSRRIEQLQQREIVLKEENS 300
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1034606659 1089 AAEAQLATAEQQLRGLRTEaerARQAQSRAQEALDKAKEKDKKITELSKEVF 1140
Cdd:pfam05557 301 SLTSSARQLEKARRELEQE---LAQYLKKIEDLNKKLKRHKALVRRLQRRVL 349
|
|
| Surf_Exclu_PgrA |
TIGR04320 |
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface ... |
1088-1175 |
1.27e-03 |
|
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface proteins of a number of Firmutes. Many members have LPXTG C-terminal anchoring motifs and a substantial number have the KxYKxGKxW putative sorting signal at the N-terminus. The tetracycline resistance plasmid pCF10 in Enterococcus faecalis promotes conjugal plasmid transfer in response to sex pheromones, but PgrA/Sec10 encoded by that plasmid, a member of this family, specifically inhibits the ability of cells to receive homologous plasmids. The phenomenon is called surface exclusion.
Pssm-ID: 275124 [Multi-domain] Cd Length: 356 Bit Score: 42.41 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1088 HAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKekdKKITELSKEVfnlkEALKEQPAALATPEVEALRDQVKD 1167
Cdd:TIGR04320 257 AALQAKLATAQADLAAAQTALNTAQAALTSAQTAYAAAQ---AALATAQKEL----ANAQAQALQTAQNNLATAQAALAN 329
|
....*...
gi 1034606659 1168 LQQQLQEA 1175
Cdd:TIGR04320 330 AEARLAKA 337
|
|
| PTZ00322 |
PTZ00322 |
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional |
198-303 |
1.53e-03 |
|
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Pssm-ID: 140343 [Multi-domain] Cd Length: 664 Bit Score: 42.58 E-value: 1.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 198 AQMCHTDLC-----------RLLLQQGAAANDQDLQGRTALMLACEGASPETVEVLLQGGAQPGITDALGQDAAHYGALA 266
Cdd:PTZ00322 79 AHMLTVELCqlaasgdavgaRILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEEN 158
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1034606659 267 GDKLILHLLQEAAQRP------SPPSALTEDDSGEASSQNSMS 303
Cdd:PTZ00322 159 GFREVVQLLSRHSQCHfelganAKPDSFTGKPPSLEDSPISSH 201
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
886-1218 |
1.61e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 42.65 E-value: 1.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 886 SACLDEARASRLLAE--EEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELP 963
Cdd:TIGR00618 146 VVLLPQGEFAQFLKAksKEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLE 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 964 AACEEARQGLAELREASEALRQSVVPASEHRRLQEEALELRGRAASLEQEvvatgkEAARLRAELERERVCSVA-LSEHe 1042
Cdd:TIGR00618 226 KELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQ------EAVLEETQERINRARKAApLAAH- 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1043 rivgtlQANVAQLEGQLEELGRRHEKTSAEvfqvqREALFMKSERHAA-EAQLATAEQQLRGLRTEAERARQAQSRA--- 1118
Cdd:TIGR00618 299 ------IKAVTQIEQQAQRIHTELQSKMRS-----RAKLLMKRAAHVKqQSSIEEQRRLLQTLHSQEIHIRDAHEVAtsi 367
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1119 QEALDKAKEKDKKITELSKEVFNLKEALKEQPAALAT-----PEVEALRDQVKDLQQQLQeAARDHSSVVALYRSHLLYA 1193
Cdd:TIGR00618 368 REISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDIlqreqATIDTRTSAFRDLQGQLA-HAKKQQELQQRYAELCAAA 446
|
330 340
....*....|....*....|....*
gi 1034606659 1194 IQGQMDEDVQRILSQILQMQRLQAQ 1218
Cdd:TIGR00618 447 ITCTAQCEKLEKIHLQESAQSLKER 471
|
|
| ANK |
smart00248 |
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ... |
115-143 |
1.66e-03 |
|
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Pssm-ID: 197603 [Multi-domain] Cd Length: 30 Bit Score: 37.18 E-value: 1.66e-03
10 20
....*....|....*....|....*....
gi 1034606659 115 GYNALHLAAKYGHPQCLKQLLQASCVVDV 143
Cdd:smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADINA 30
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
860-1031 |
1.92e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.45 E-value: 1.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 860 QLRAALEQAREDLRDRDSRLRELEAAsacLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGE 939
Cdd:COG1579 14 ELDSELDRLEHRLKELPAELAELEDE---LAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 940 QQRTAA--AELGRARDAAEARVAELPAACEEARQGLAELREASEALRQsvvpasehrRLQEEALELRGRAASLEQEVVAT 1017
Cdd:COG1579 91 YEALQKeiESLKRRISDLEDEILELMERIEELEEELAELEAELAELEA---------ELEEKKAELDEELAELEAELEEL 161
|
170
....*....|....
gi 1034606659 1018 GKEAARLRAELERE 1031
Cdd:COG1579 162 EAEREELAAKIPPE 175
|
|
| hsdR |
PRK11448 |
type I restriction enzyme EcoKI subunit R; Provisional |
989-1102 |
2.00e-03 |
|
type I restriction enzyme EcoKI subunit R; Provisional
Pssm-ID: 236912 [Multi-domain] Cd Length: 1123 Bit Score: 42.63 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 989 PASEHRRLQEEALELRgraasleQEVVATGKEAARLRAELERERVCSVALsehERIVGTLQANVAQLEGQLEELGRRHEK 1068
Cdd:PRK11448 140 PENLLHALQQEVLTLK-------QQLELQAREKAQSQALAEAQQQELVAL---EGLAAELEEKQQELEAQLEQLQEKAAE 209
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1034606659 1069 TSAEVFQVQREAlfmkSERHAAEAQLATAE------QQLR 1102
Cdd:PRK11448 210 TSQERKQKRKEI----TDQAAKRLELSEEEtrilidQQLR 245
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
860-1188 |
2.11e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 42.36 E-value: 2.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 860 QLRAALEQAREDLRDRDSRLR----ELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATAR 935
Cdd:TIGR02169 424 DLNAAIAGIEAKINELEEEKEdkalEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASE 503
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 936 ATGEQQRTAAAELGRARDAAEARVAEL-------PAACEEARQGLA---------------ELREASEALRQSVVPASEH 993
Cdd:TIGR02169 504 ERVRGGRAVEEVLKASIQGVHGTVAQLgsvgeryATAIEVAAGNRLnnvvveddavakeaiELLKRRKAGRATFLPLNKM 583
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 994 RRLQEE------------ALEL-----RGRAA---SLEQEVVATGKEAAR----------LRAEL-ERervcSVALSEHE 1042
Cdd:TIGR02169 584 RDERRDlsilsedgvigfAVDLvefdpKYEPAfkyVFGDTLVVEDIEAARrlmgkyrmvtLEGELfEK----SGAMTGGS 659
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1043 RIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEAL 1122
Cdd:TIGR02169 660 RAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERL 739
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1034606659 1123 -----------DKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALRDQVKDLQQQLQEAARDHSSVVALYRS 1188
Cdd:TIGR02169 740 eeleedlssleQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLRE 816
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
826-1128 |
2.15e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 42.19 E-value: 2.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 826 GKCEAAEAEAGRLRERVREAEGSGASGGGGGDT-TQLRAALEQAREDLRdrdSRLRELEAASACLDEA------------ 892
Cdd:pfam07888 80 SRVAELKEELRQSREKHEELEEKYKELSASSEElSEEKDALLAQRAAHE---ARIRELEEDIKTLTQRvleretelermk 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 893 ----RASRLLAEEEA--RGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAAC 966
Cdd:pfam07888 157 erakKAGAQRKEEEAerKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRKEAENEALL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 967 EEARqGLAELREASEAlrqsvvpasehrrlqeealelrgRAASLEQEVVATGKEAARLRAELERERV----CSVALSEHE 1042
Cdd:pfam07888 237 EELR-SLQERLNASER-----------------------KVEGLGEELSSMAAQRDRTQAELHQARLqaaqLTLQLADAS 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1043 RIVGTLQANVAQ----LEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRA 1118
Cdd:pfam07888 293 LALREGRARWAQeretLQQSAEADKDRIEKLSAELQRLEERLQEERMEREKLEVELGREKDCNRVQLSESRRELQELKAS 372
|
330
....*....|
gi 1034606659 1119 QEALDKAKEK 1128
Cdd:pfam07888 373 LRVAQKEKEQ 382
|
|
| Ank |
pfam00023 |
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ... |
115-145 |
3.03e-03 |
|
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.
Pssm-ID: 459634 [Multi-domain] Cd Length: 34 Bit Score: 36.50 E-value: 3.03e-03
10 20 30
....*....|....*....|....*....|..
gi 1034606659 115 GYNALHLAA-KYGHPQCLKQLLQASCVVDVVD 145
Cdd:pfam00023 2 GNTPLHLAAgRRGNLEIVKLLLSKGADVNARD 33
|
|
| Ank_5 |
pfam13857 |
Ankyrin repeats (many copies); |
209-262 |
3.04e-03 |
|
Ankyrin repeats (many copies);
Pssm-ID: 433530 [Multi-domain] Cd Length: 56 Bit Score: 36.94 E-value: 3.04e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 1034606659 209 LLQQG-AAANDQDLQGRTALMLACEGASPETVEVLLQGGAQPGITDALGQDAAHY 262
Cdd:pfam13857 1 LLEHGpIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDL 55
|
|
| PHA02878 |
PHA02878 |
ankyrin repeat protein; Provisional |
174-262 |
3.48e-03 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222939 [Multi-domain] Cd Length: 477 Bit Score: 41.40 E-value: 3.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 174 EVLCSFKAHLNPQDR-SGATPLIIAAQMCHTDLCRLLLQQGAAANDQDLQGRTALMLACEGASPETVEVLLQGGAQPGIT 252
Cdd:PHA02878 151 KLLLSYGADINMKDRhKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDAR 230
|
90
....*....|
gi 1034606659 253 DALGQDAAHY 262
Cdd:PHA02878 231 DKCGNTPLHI 240
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
437-575 |
3.51e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 41.59 E-value: 3.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 437 LERQVQELQQL---LVERQEEKESLGREVESLQSRLSLLENERENTSYDVTTLQDEEGELPDLPGAE---VLLSRQLSPS 510
Cdd:PRK03918 226 LEKEVKELEELkeeIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAeeyIKLSEFYEEY 305
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1034606659 511 AQE------HLASLQEQVAVLTRQNQELMEKVQILENFEK--DETQMEVEALAEviPLALYDSLRAEFDQLRR 575
Cdd:PRK03918 306 LDElreiekRLSRLEEEINGIEERIKELEEKEERLEELKKklKELEKRLEELEE--RHELYEEAKAKKEELER 376
|
|
| PHA02874 |
PHA02874 |
ankyrin repeat protein; Provisional |
131-246 |
3.59e-03 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165205 [Multi-domain] Cd Length: 434 Bit Score: 41.49 E-value: 3.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 131 LKQLLQASCVVDVVDSSGWTALHHAetgshcvgpAAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMCHTDLCRLLL 210
Cdd:PHA02874 107 IKTILDCGIDVNIKDAELKTFLHYA---------IKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLL 177
|
90 100 110
....*....|....*....|....*....|....*.
gi 1034606659 211 QQGAAANDQDLQGRTALMLACEGASPETVEVLLQGG 246
Cdd:PHA02874 178 EKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHG 213
|
|
| PRK10246 |
PRK10246 |
exonuclease subunit SbcC; Provisional |
857-1218 |
3.72e-03 |
|
exonuclease subunit SbcC; Provisional
Pssm-ID: 182330 [Multi-domain] Cd Length: 1047 Bit Score: 41.71 E-value: 3.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 857 DTTQLRAALEQAREDLRDRDSrlreLEAASACLD-EARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATAR 935
Cdd:PRK10246 378 DREQLRQWQQQLTHAEQKLNA----LPAITLTLTaDEVAAALAQHAEQRPLRQRLVALHGQIVPQQKRLAQLQVAIQNVT 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 936 aTGEQQRTAAAELGRARDAAEAR-VAELPAACE-EARqgLAELrEASEALRQSVVP-----ASEHRRL-QEEALEL---R 1004
Cdd:PRK10246 454 -QEQTQRNAALNEMRQRYKEKTQqLADVKTICEqEAR--IKDL-EAQRAQLQAGQPcplcgSTSHPAVeAYQALEPgvnQ 529
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1005 GRAASLEQEVVATGKEAARLRAELE-------RERVCSVALSEHER-IVGTLQANVAQLEGQLEElgrRHEKTSAEVFQV 1076
Cdd:PRK10246 530 SRLDALEKEVKKLGEEGAALRGQLDaltkqlqRDESEAQSLRQEEQaLTQQWQAVCASLNITLQP---QDDIQPWLDAQE 606
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1077 QRE-ALFMKSERHAAEAQLATAEQQLRGLRTEAERARQA----------------------QSRAQEAlDKAKEKDKKIT 1133
Cdd:PRK10246 607 EHErQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQQlltalagyaltlpqedeeaswlATRQQEA-QSWQQRQNELT 685
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1134 ELSKEVFNLKEALKEQPAALATPEVEA----------------LRDQVKDLQQQL-QEAARDHSSvvalyRSHLLYAIQG 1196
Cdd:PRK10246 686 ALQNRIQQLTPLLETLPQSDDLPHSEEtvaldnwrqvheqclsLHSQLQTLQQQDvLEAQRLQKA-----QAQFDTALQA 760
|
410 420
....*....|....*....|....*
gi 1034606659 1197 QMDEDVQRILSQILQ---MQRLQAQ 1218
Cdd:PRK10246 761 SVFDDQQAFLAALLDeetLTQLEQL 785
|
|
| Cnn_1N |
pfam07989 |
Centrosomin N-terminal motif 1; This domain has been identified in two microtubule associated ... |
1126-1178 |
3.86e-03 |
|
Centrosomin N-terminal motif 1; This domain has been identified in two microtubule associated proteins in Schizosaccharomyces pombe, Mto1 and Pcp1. Mto1 has been identified in association with spindle pole body and non-spindle pole body microtubules. The pericentrin homolog Pcp1 is also associated with the fungal centrosome or spindle pole body (SPB). Members of this family have been named centrosomins, and are an essential mitotic centrosome component required for assembly of all other known pericentriolar matrix proteins in order to achieve microtubule-organizing activity in fission yeast. Cnn_1N is a short conserved motif towards the N-terminus. Motif 1 is found to be necessary for proper recruitment of gamma-tubulin, D-TACC (the homolog of vertebrate transforming acidic coiled-coil proteins [TACC]), and Minispindles (Msps) to embryonic centrosomes but is not required for assembly of other centrosome components including Aurora A kinase and CP60 in Drosophila.
Pssm-ID: 462333 [Multi-domain] Cd Length: 69 Bit Score: 37.12 E-value: 3.86e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1034606659 1126 KEKDKKITELSKEVFNLK---EALKEQPAALATPEVEALRDQVKDLQQQLQEAARD 1178
Cdd:pfam07989 1 REQEKQIDKLKKENFNLKlkiHFLEERLEKLAPEQIEEALKENIELKVELETLQRE 56
|
|
| PRK12472 |
PRK12472 |
hypothetical protein; Provisional |
880-982 |
3.93e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 237110 [Multi-domain] Cd Length: 508 Bit Score: 41.39 E-value: 3.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 880 RELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATA-------RATGEQQRT------AAA 946
Cdd:PRK12472 197 REAEDAARAADEAKTAAAAAAREAAPLKASLRKLERAKARADAELKRADKALAAAktdeakaRAEERQQKAaqqaaeAAT 276
|
90 100 110
....*....|....*....|....*....|....*.
gi 1034606659 947 ELGRARDAAEARVAELPAACEEARQGLAELREASEA 982
Cdd:PRK12472 277 QLDTAKADAEAKRAAAAATKEAAKAAAAKKAETAKA 312
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
861-1175 |
4.14e-03 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 41.35 E-value: 4.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 861 LRAALEQAREDLRDRDSRLRELEAASACLdearasrllaEEEARGLRAELAQREEARLEQSRELEVLREQlataRATGEQ 940
Cdd:pfam10174 399 LQKKIENLQEQLRDKDKQLAGLKERVKSL----------QTDSSNTDTALTTLEEALSEKERIIERLKEQ----REREDR 464
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 941 QRTAAAE-LGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVVP----------------------ASEHRRLQ 997
Cdd:pfam10174 465 ERLEELEsLKKENKDLKEKVSALQPELTEKESSLIDLKEHASSLASSGLKkdsklksleiaveqkkeecsklENQLKKAH 544
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 998 EEALELRG------RAASLEQEVVATGKEAARLRAELERervCSVALSEHERIVGTLQANVAQLEGQLEELGRRHEKTSA 1071
Cdd:pfam10174 545 NAEEAVRTnpeindRIRLLEQEVARYKEESGKAQAEVER---LLGILREVENEKNDKDKKIAELESLTLRQMKEQNKKVA 621
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1072 EVFQVQREalfMKSERhaaeaqlatAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDK-KITELSKEVFNLKEALKEQP 1150
Cdd:pfam10174 622 NIKHGQQE---MKKKG---------AQLLEEARRREDNLADNSQQLQLEELMGALEKTRqELDATKARLSSTQQSLAEKD 689
|
330 340
....*....|....*....|....*
gi 1034606659 1151 AALATPEVEAlRDQVKDLQQQLQEA 1175
Cdd:pfam10174 690 GHLTNLRAER-RKQLEEILEMKQEA 713
|
|
| PRK12472 |
PRK12472 |
hypothetical protein; Provisional |
862-970 |
4.28e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 237110 [Multi-domain] Cd Length: 508 Bit Score: 41.01 E-value: 4.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 862 RAALEQAREDLRDRDSrLRELEAASACLDE--ARASRLLA---EEEARglraelAQREEARLEQSRELEVLREQLATARA 936
Cdd:PRK12472 211 TAAAAAAREAAPLKAS-LRKLERAKARADAelKRADKALAaakTDEAK------ARAEERQQKAAQQAAEAATQLDTAKA 283
|
90 100 110
....*....|....*....|....*....|....
gi 1034606659 937 TGEQQRTAAAELGRARDAAEARVAELPAACEEAR 970
Cdd:PRK12472 284 DAEAKRAAAAATKEAAKAAAAKKAETAKAATDAK 317
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
897-1069 |
5.62e-03 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 40.42 E-value: 5.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 897 LLAEEEARGLRAELAQREEArleqsreLEVLREQLATARATGEQQrtaaaelgRARDAAEARVAELPAACEEARQglaEL 976
Cdd:COG1566 72 VLARLDPTDLQAALAQAEAQ-------LAAAEAQLARLEAELGAE--------AEIAAAEAQLAAAQAQLDLAQR---EL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 977 REASEALRQSVVPASEHRRLQEEALELRGRAASLEQEVVATgKEAARLRAELErervcsvalseherivgTLQANVAQLE 1056
Cdd:COG1566 134 ERYQALYKKGAVSQQELDEARAALDAAQAQLEAAQAQLAQA-QAGLREEEELA-----------------AAQAQVAQAE 195
|
170
....*....|...
gi 1034606659 1057 GQLEELGRRHEKT 1069
Cdd:COG1566 196 AALAQAELNLART 208
|
|
| Ank |
pfam00023 |
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ... |
190-220 |
5.76e-03 |
|
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.
Pssm-ID: 459634 [Multi-domain] Cd Length: 34 Bit Score: 35.73 E-value: 5.76e-03
10 20 30
....*....|....*....|....*....|..
gi 1034606659 190 GATPLIIAAQMC-HTDLCRLLLQQGAAANDQD 220
Cdd:pfam00023 2 GNTPLHLAAGRRgNLEIVKLLLSKGADVNARD 33
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
978-1215 |
5.82e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 41.19 E-value: 5.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 978 EASEALrQSVVPASEHRRLQEEalelrgRAASLEQEVVATGKEAARLRAELERERVCSVALSEHERIvGTLQANVAQLEG 1057
Cdd:PRK10929 45 EIVEAL-QSALNWLEERKGSLE------RAKQYQQVIDNFPKLSAELRQQLNNERDEPRSVPPNMST-DALEQEILQVSS 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1058 QLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQS---RAQEALDKAKEKDKKITE 1134
Cdd:PRK10929 117 QLLEKSRQAQQEQDRAREISDSLSQLPQQQTEARRQLNEIERRLQTLGTPNTPLAQAQLtalQAESAALKALVDELELAQ 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1135 LS----KEVFNLKEALKEQPAALATPEVEALRDQVKDLQQQLQEAARDHSSVVALYRSHLLYAIQGQMdeDVQRILSQIL 1210
Cdd:PRK10929 197 LSannrQELARLRSELAKKRSQQLDAYLQALRNQLNSQRQREAERALESTELLAEQSGDLPKSIVAQF--KINRELSQAL 274
|
....*..
gi 1034606659 1211 --QMQRL 1215
Cdd:PRK10929 275 nqQAQRM 281
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
975-1148 |
5.89e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 40.77 E-value: 5.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 975 ELREASEALRQSVVpasehrRLQEEALELRGRAASLEQEVVATGKEAARLRAELER-ERV------------CSVALSEH 1041
Cdd:PHA02562 224 ELVEEAKTIKAEIE------ELTDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQfQKVikmyekggvcptCTQQISEG 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1042 ERIVGTLQANVAQLEGQLEELGRRHEKTSA---EVFQVQREALFMKSerhaaeaQLATAEQQLRGLRTEAERARQAQSRA 1118
Cdd:PHA02562 298 PDRITKIKDKLKELQHSLEKLDTAIDELEEimdEFNEQSKKLLELKN-------KISTNKQSLITLVDKAKKVKAAIEEL 370
|
170 180 190
....*....|....*....|....*....|.
gi 1034606659 1119 QEA-LDKAKEKDKKITELSKEVFNLKEALKE 1148
Cdd:PHA02562 371 QAEfVDNAEELAKLQDELDKIVKTKSELVKE 401
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
860-1198 |
7.28e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.27 E-value: 7.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 860 QLRAALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGE 939
Cdd:COG4372 39 ELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELE 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 940 QQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQsvvpasehrRLQEEALELRGRAASLEQEVVATGK 1019
Cdd:COG4372 119 ELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQE---------ELAALEQELQALSEAEAEQALDELL 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1020 EAARLRAELERERVCSVALSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQ 1099
Cdd:COG4372 190 KEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILV 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1100 QLRGLRTEAERARQAQSRAQEALDKAKEKDKKI-TELSKEVFNLKEALKEQPAALATPEVEALRDQVKDLQQQLQEAARD 1178
Cdd:COG4372 270 EKDTEEEELEIAALELEALEEAALELKLLALLLnLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLVG 349
|
330 340
....*....|....*....|
gi 1034606659 1179 HSSVVALYRSHLLYAIQGQM 1198
Cdd:COG4372 350 LLDNDVLELLSKGAEAGVAD 369
|
|
| HlpA |
COG2825 |
Periplasmic chaperone for outer membrane proteins, Skp family [Cell wall/membrane/envelope ... |
1117-1205 |
7.70e-03 |
|
Periplasmic chaperone for outer membrane proteins, Skp family [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 442073 [Multi-domain] Cd Length: 171 Bit Score: 38.66 E-value: 7.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1117 RAQEALDK-AKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALRDQVKDLQQQLQEAARDHSSVVALYRSHLLYAIQ 1195
Cdd:COG2825 43 AAQKKLEKeFKKRQAELQKLEKELQALQEKLQKEAATLSEEERQKKERELQKKQQELQRKQQEAQQDLQKRQQELLQPIL 122
|
90
....*....|
gi 1034606659 1196 GQMDEDVQRI 1205
Cdd:COG2825 123 EKIQKAIKEV 132
|
|
| PHA02876 |
PHA02876 |
ankyrin repeat protein; Provisional |
105-248 |
7.87e-03 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165207 [Multi-domain] Cd Length: 682 Bit Score: 40.43 E-value: 7.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 105 GSNVMSADGAGYNALHLAAKYGHPQCLKQLLQASCVVDVVDSSGWTALHHAETGSHcvgPaaggcLSCSEVLCSFKAHLN 184
Cdd:PHA02876 365 GANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTN---P-----YMSVKTLIDRGANVN 436
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1034606659 185 PQDRSGATPLIIAAQM-CHTDLCRLLLQQGAAANDQDLQGRTALMLACEGASpeTVEVLLQGGAQ 248
Cdd:PHA02876 437 SKNKDLSTPLHYACKKnCKLDVIEMLLDNGADVNAINIQNQYPLLIALEYHG--IVNILLHYGAE 499
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1049-1177 |
8.17e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.13 E-value: 8.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1049 QANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKA-KE 1127
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELrAE 98
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1034606659 1128 KDKKITELSKEVFNL-KEALKEQPAALATPE---------------VEALRDQVKDLQQQLQEAAR 1177
Cdd:COG4942 99 LEAQKEELAELLRALyRLGRQPPLALLLSPEdfldavrrlqylkylAPARREQAEELRADLAELAA 164
|
|
| Ank_5 |
pfam13857 |
Ankyrin repeats (many copies); |
183-230 |
8.55e-03 |
|
Ankyrin repeats (many copies);
Pssm-ID: 433530 [Multi-domain] Cd Length: 56 Bit Score: 35.79 E-value: 8.55e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 1034606659 183 LNPQDRSGATPLIIAAQMCHTDLCRLLLQQGAAANDQDLQGRTALMLA 230
Cdd:pfam13857 9 LNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
|
|
| PLN02900 |
PLN02900 |
alanyl-tRNA synthetase |
891-1060 |
9.34e-03 |
|
alanyl-tRNA synthetase
Pssm-ID: 215487 [Multi-domain] Cd Length: 936 Bit Score: 40.38 E-value: 9.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 891 EARASRLLAEEE-ARGLRaelaqREEArleqsrelevlreqlatarATGEqqrtAAAELGRARDAAEARVAE-LPAACEE 968
Cdd:PLN02900 712 EAEAFKLLSEEGiAKGIR-----RITA-------------------VTGG----AAVEAINAADSLERELDSaLKVEGSD 763
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 969 ARQGLAELREASEALRQSVVPASEhrrlqeealeLRGRAASLEQEVVATGKEAARLRAELERERV---CSVALSEHERIV 1045
Cdd:PLN02900 764 LEKKVASLKSRVDAAVIPAAKKEE----------IRARVSALQKELRAAQKEAAALRAKLAVAKAtelASKALSAGKSVL 833
|
170
....*....|....*
gi 1034606659 1046 gtlqanVAQLEGQLE 1060
Cdd:PLN02900 834 ------VARLDVGVD 842
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
857-1214 |
9.45e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 40.49 E-value: 9.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 857 DTTQLRAALEQAREDLRDRDSRLRE----LEAASACLDEARASRLLAEEEARGLRAE-------LAQREEARL---EQSR 922
Cdd:pfam15921 483 ELTAKKMTLESSERTVSDLTASLQEkeraIEATNAEITKLRSRVDLKLQELQHLKNEgdhlrnvQTECEALKLqmaEKDK 562
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 923 ELEVLREQLAT-ARATGEQQRTAAA--------------------ELGRARDAAEARVAELPAACEEARQGLAELREA-S 980
Cdd:pfam15921 563 VIEILRQQIENmTQLVGQHGRTAGAmqvekaqlekeindrrlelqEFKILKDKKDAKIRELEARVSDLELEKVKLVNAgS 642
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 981 EALRQSVVPASEHRRLQEEALELRGRAASLEQEV---------------VATGKEAARLRA---ELERERVCSVALSEHE 1042
Cdd:pfam15921 643 ERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYevlkrnfrnkseemeTTTNKLKMQLKSaqsELEQTRNTLKSMEGSD 722
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1043 ----RIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQ-------QLRGLRTEAERA 1111
Cdd:pfam15921 723 ghamKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATeknkmagELEVLRSQERRL 802
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 1112 RQAQSRAQEALDKAK----EKDKKITELSKEVFNLKEALKEQPAALATPEVEAlRDQVKDLQQQLQEAARDHSSV----- 1182
Cdd:pfam15921 803 KEKVANMEVALDKASlqfaECQDIIQRQEQESVRLKLQHTLDVKELQGPGYTS-NSSMKPRLLQPASFTRTHSNVpssqs 881
|
410 420 430
....*....|....*....|....*....|..
gi 1034606659 1183 VALYRSHLLYAIQGqMDEDVQRILSQILQMQR 1214
Cdd:pfam15921 882 TASFLSHHSRKTNA-LKEDPTRDLKQLLQELR 912
|
|
| PRK11637 |
PRK11637 |
AmiB activator; Provisional |
900-1026 |
9.73e-03 |
|
AmiB activator; Provisional
Pssm-ID: 236942 [Multi-domain] Cd Length: 428 Bit Score: 40.06 E-value: 9.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 900 EEEARGLR--AELAQREEARLEQSRELEVLREQLATARATGEQ-----------QRTAAAELGRARDAAEARVAELPAAC 966
Cdd:PRK11637 149 EESQRGERilAYFGYLNQARQETIAELKQTREELAAQKAELEEkqsqqktllyeQQAQQQKLEQARNERKKTLTGLESSL 228
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034606659 967 EEARQGLAELREASEALRQSVVPASEhrrlqeealELRGRAaslEQEvvatGKEAARLRA 1026
Cdd:PRK11637 229 QKDQQQLSELRANESRLRDSIARAER---------EAKARA---ERE----AREAARVRD 272
|
|
| |
