|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
529-788 |
2.53e-19 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 91.92 E-value: 2.53e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 529 RLDFDDNNAFSDLHDLEVLDLSHNAhyfsiagVTHRLGFIQNLINLRVLNLSHNGIYTLTEE-SELKsiSLKELVFSGNR 607
Cdd:COG4886 100 ELDLSGNEELSNLTNLESLDLSGNQ-------LTDLPEELANLTNLKELDLSNNQLTDLPEPlGNLT--NLKSLDLSNNQ 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 608 LDRLWNAndgkywsiFKSLQNLIRLDLSYNNLQQIPNgAFLNLPqSLQELLISGNKLRFFNWTLLQyFPHLHLLDLSRNE 687
Cdd:COG4886 171 LTDLPEE--------LGNLTNLKELDLSNNQITDLPE-PLGNLT-NLEELDLSGNQLTDLPEPLAN-LTNLETLDLSNNQ 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 688 LYFLPNcLSKFaHSLETLLLSHNHFSHLPSgfLSEARNLVHLDLSFNTIKMINKSSLQTKMKTNLSILELHGNYFDCTCD 767
Cdd:COG4886 240 LTDLPE-LGNL-TNLEELDLSNNQLTDLPP--LANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLI 315
|
250 260
....*....|....*....|.
gi 1039796467 768 ISDFRSWLDENLNITIPKLVN 788
Cdd:COG4886 316 LLLLLTTLLLLLLLLKGLLVT 336
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
63-481 |
6.55e-17 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 84.21 E-value: 6.55e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 63 TNIDLSDNAITHITKESFQKLQNLTKIDLNHNAKQQHPNENKNGMNITEGALLSLRNLTVLLLEDNQLYTIPA-GLPESL 141
Cdd:COG4886 19 ELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDlGDLTNL 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 142 KELSLIQNNIFqvtknntFGLRNLERLYLGWNcyfkcnqTFKVEDGAFKNLIHLKVLSLSFNNLFYVPPKLPS--SLRKL 219
Cdd:COG4886 99 TELDLSGNEEL-------SNLTNLESLDLSGN-------QLTDLPEELANLTNLKELDLSNNQLTDLPEPLGNltNLKSL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 220 FLSNAKIMNITQEdFKGLENLTLLDLSGNcprcynapfpctpckensSIHIHPLAFQSLTQLLYLNLSSTSLRTIPSTwF 299
Cdd:COG4886 165 DLSNNQLTDLPEE-LGNLTNLKELDLSNN------------------QITDLPEPLGNLTNLEELDLSGNQLTDLPEP-L 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 300 ENLSNLKELHLEFNylvqEIASGAFLTKLPSLQILDLSFNfqykeylQFINISSNfSKLRSLKKLHLRGYVFRELKKKHF 379
Cdd:COG4886 225 ANLTNLETLDLSNN----QLTDLPELGNLTNLEELDLSNN-------QLTDLPPL-ANLTNLKTLDLSNNQLTDLKLKEL 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 380 EHLQSLPNLATINLGINFIEKIDFKAFQNFSKLDVIYLSGNRIASVLDGTDYSSWRNRLRKPLSTDDDEFDPHVNFYHST 459
Cdd:COG4886 293 ELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLL 372
|
410 420
....*....|....*....|..
gi 1039796467 460 KPLIKPQCTAYGKALDLSLNNI 481
Cdd:COG4886 373 GLLEATLLTLALLLLTLLLLLL 394
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
868-1004 |
3.12e-14 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 70.82 E-value: 3.12e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 868 YDAYISYdtkdaSVTDWVINELRYHLEESEDKSVLlCLEERDWDPGLPIIDNLMQSINQSKKTIFVLTKKYAKSWNFKTA 947
Cdd:smart00255 2 YDVFISY-----SGKEDVRNEFLSHLLEKLRGYGL-CVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDE 75
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1039796467 948 FYLALQRLMDENMDVIIFILLEPVLQY--SQYLRLRqRICKSSILQWPNNPKAEnlFWQ 1004
Cdd:smart00255 76 LVAALENALEEGGLRVIPIFYEVIPSDvrKQPGKFR-KVFKKNYLKWPEDEKEQ--FWK 131
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
141-717 |
2.05e-10 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 64.87 E-value: 2.05e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 141 LKELSLIQNNIFQVTKNNTFGLRNLERLYLGWNcyfkcNQTFKVEDGAFKNLIHLKVLSLSFNNLF-YVPPKLPSSLRKL 219
Cdd:PLN00113 71 VVSIDLSGKNISGKISSAIFRLPYIQTINLSNN-----QLSGPIPDDIFTTSSSLRYLNLSNNNFTgSIPRGSIPNLETL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 220 FLSNAKIMNITQEDFKGLENLTLLDLSGNCprcynapfpctpckenSSIHIhPLAFQSLTQLLYLNLSSTSLR-TIPSTw 298
Cdd:PLN00113 146 DLSNNMLSGEIPNDIGSFSSLKVLDLGGNV----------------LVGKI-PNSLTNLTSLEFLTLASNQLVgQIPRE- 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 299 FENLSNLKELHLEFNYLVQEIASGafLTKLPSLQILDLSFNfqykeylqfiNISSNF-SKLRSLKKLHlrgYVF---REL 374
Cdd:PLN00113 208 LGQMKSLKWIYLGYNNLSGEIPYE--IGGLTSLNHLDLVYN----------NLTGPIpSSLGNLKNLQ---YLFlyqNKL 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 375 KKKHFEHLQSLPNLATINLGINFIEKIDFKAFQNFSKLDVIYLSGNRIASVLDGTDYSS--------WRNRLRKPLSTDd 446
Cdd:PLN00113 273 SGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLprlqvlqlWSNKFSGEIPKN- 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 447 deFDPHVNFyhstkplikpqctaygKALDLSLNNI----------------FIIGKSQFEGfqDI-----ACLNLS-FNA 504
Cdd:PLN00113 352 --LGKHNNL----------------TVLDLSTNNLtgeipeglcssgnlfkLILFSNSLEG--EIpkslgACRSLRrVRL 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 505 NTQVFNG---TEFSSMPHIKYLDLTNNRLDFDDNNAFSDLHDLEVLDLSHNAHYfsiAGVTHRLGfiqnLINLRVLNLSH 581
Cdd:PLN00113 412 QDNSFSGelpSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFF---GGLPDSFG----SKRLENLDLSR 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 582 NGIYTLTEESELKSISLKELVFSGNRLdrlwnanDGKYWSIFKSLQNLIRLDLSYNNLqqipNGaflNLPQSLQEllisg 661
Cdd:PLN00113 485 NQFSGAVPRKLGSLSELMQLKLSENKL-------SGEIPDELSSCKKLVSLDLSHNQL----SG---QIPASFSE----- 545
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 1039796467 662 nklrffnwtllqyFPHLHLLDLSRNELYF-LPNCLSKfAHSLETLLLSHNHF-SHLPS 717
Cdd:PLN00113 546 -------------MPVLSQLDLSQNQLSGeIPKNLGN-VESLVQVNISHNHLhGSLPS 589
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
264-760 |
1.01e-09 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 62.94 E-value: 1.01e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 264 ENSSIHIHPLAFQsLTQLLYLNLSSTSLR-TIPSTWFENLSNLKELHLEFNYLVQEIASGAfltkLPSLQILDLSFNFQY 342
Cdd:PLN00113 79 KNISGKISSAIFR-LPYIQTINLSNNQLSgPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGS----IPNLETLDLSNNMLS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 343 KEY---------LQFINISSNF---------SKLRSLKKL-----HLRGYVFRELKKkhfehlqsLPNLATINLGINFIE 399
Cdd:PLN00113 154 GEIpndigsfssLKVLDLGGNVlvgkipnslTNLTSLEFLtlasnQLVGQIPRELGQ--------MKSLKWIYLGYNNLS 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 400 ---KIDFKAFQNFSKLDVIY--LSGNRIASVLDGTDYSS---WRNRLRKPLstdddefdPHVNFyhSTKPLIkpqctayg 471
Cdd:PLN00113 226 geiPYEIGGLTSLNHLDLVYnnLTGPIPSSLGNLKNLQYlflYQNKLSGPI--------PPSIF--SLQKLI-------- 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 472 kALDLSLNNIFIIGKSQFEGFQDIACLNLSFNANTQVFNGTeFSSMPHIKYLDLTNNRLDFDDNNAFSDLHDLEVLDLSH 551
Cdd:PLN00113 288 -SLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVA-LTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLST 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 552 NahyfSIAG-VTHRLGFIQNLINLRVLNLSHNGIY--TLTEESELKSISLKELVFSGnrldrlwnandgKYWSIFKSLQN 628
Cdd:PLN00113 366 N----NLTGeIPEGLCSSGNLFKLILFSNSLEGEIpkSLGACRSLRRVRLQDNSFSG------------ELPSEFTKLPL 429
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 629 LIRLDLSYNNLQ--------QIP---------NGAFLNLPQS-----LQELLISGNKLRFFNWTLLQYFPHLHLLDLSRN 686
Cdd:PLN00113 430 VYFLDISNNNLQgrinsrkwDMPslqmlslarNKFFGGLPDSfgskrLENLDLSRNQFSGAVPRKLGSLSELMQLKLSEN 509
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1039796467 687 ELY-FLPNCLSKfAHSLETLLLSHNHFS-HLPSGFlSEARNLVHLDLSFNTIK---MINKSSLQTKMKTNLSILELHGN 760
Cdd:PLN00113 510 KLSgEIPDELSS-CKKLVSLDLSHNQLSgQIPASF-SEMPVLSQLDLSQNQLSgeiPKNLGNVESLVQVNISHNHLHGS 586
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
105-249 |
2.05e-09 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 58.64 E-value: 2.05e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 105 NGMNITE-GALLSLRNLTVLLLEDNQLYTIPaGLP--ESLKELSLIQNNIfqvTK-NNTFGLRNLERLYLGwncyfkCNQ 180
Cdd:cd21340 10 NDKNITKiDNLSLCKNLKVLYLYDNKITKIE-NLEflTNLTHLYLQNNQI---EKiENLENLVNLKKLYLG------GNR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 181 TFKVEDgaFKNLIHLKVLSLSFNNLfyvPPKLP------------SSLRKLFLSNAKIMNItqEDFKGLENLTLLDLSGN 248
Cdd:cd21340 80 ISVVEG--LENLTNLEELHIENQRL---PPGEKltfdprslaalsNSLRVLNISGNNIDSL--EPLAPLRNLEQLDASNN 152
|
.
gi 1039796467 249 C 249
Cdd:cd21340 153 Q 153
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
871-982 |
5.26e-09 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 55.01 E-value: 5.26e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 871 YISYDTKDASVTDWVINELryhleesEDKSVLLCLEERDWDPGLPIIDNLMQSINQSKKTIFVLTKKYAKSWNFKTAFYL 950
Cdd:pfam13676 2 FISYAGEDRAWAEWLADAL-------EAAGYRVWLDRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEA 74
|
90 100 110
....*....|....*....|....*....|....*..
gi 1039796467 951 ALQRLMDENmdVIIFILLE-----PVLQYSQYLRLRQ 982
Cdd:pfam13676 75 ALADPEGRK--RLIPVRLEcdlelPGLAGLQYIDLRD 109
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
543-762 |
2.34e-07 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 53.90 E-value: 2.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 543 DLEVLDLSHNAHYFSIAGVTHRLGFIQNLINLRVLNLSHNGIYTLTE---ESELKSISLKELVFSGNRLDrlwnanDGKY 619
Cdd:cd00116 52 SLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCgvlESLLRSSSLQELKLNNNGLG------DRGL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 620 WSIFKSLQ----NLIRLDLSYNNLQQ---IPNGAFLNLPQSLQELLISGNKLRFFNWTLL----QYFPHLHLLDLSRNEL 688
Cdd:cd00116 126 RLLAKGLKdlppALEKLVLGRNRLEGascEALAKALRANRDLKELNLANNGIGDAGIRALaeglKANCNLEVLDLNNNGL 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 689 -----YFLPNCLSKFAhSLETLLLSHNHF-----SHLPSGFLSEARNLVHLDLSFNTIKMINKSSLQTKMKTNLSI--LE 756
Cdd:cd00116 206 tdegaSALAETLASLK-SLEVLNLGDNNLtdagaAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLleLD 284
|
....*.
gi 1039796467 757 LHGNYF 762
Cdd:cd00116 285 LRGNKF 290
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
597-664 |
3.15e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 48.29 E-value: 3.15e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1039796467 597 SLKELVFSGNRLDRLwnandgkYWSIFKSLQNLIRLDLSYNNLQQIPNGAFLNLPqSLQELLISGNKL 664
Cdd:pfam13855 2 NLRSLDLSNNRLTSL-------DDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLP-SLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
498-552 |
3.91e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.90 E-value: 3.91e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 1039796467 498 LNLSFNaNTQVFNGTEFSSMPHIKYLDLTNNRLDFDDNNAFSDLHDLEVLDLSHN 552
Cdd:pfam13855 6 LDLSNN-RLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGN 59
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
279-339 |
2.15e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 45.98 E-value: 2.15e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1039796467 279 TQLLYLNLSSTSLRTIPSTWFENLSNLKELHLEFNYLvQEIASGAFlTKLPSLQILDLSFN 339
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL-TTLSPGAF-SGLPSLRYLDLSGN 59
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
529-788 |
2.53e-19 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 91.92 E-value: 2.53e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 529 RLDFDDNNAFSDLHDLEVLDLSHNAhyfsiagVTHRLGFIQNLINLRVLNLSHNGIYTLTEE-SELKsiSLKELVFSGNR 607
Cdd:COG4886 100 ELDLSGNEELSNLTNLESLDLSGNQ-------LTDLPEELANLTNLKELDLSNNQLTDLPEPlGNLT--NLKSLDLSNNQ 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 608 LDRLWNAndgkywsiFKSLQNLIRLDLSYNNLQQIPNgAFLNLPqSLQELLISGNKLRFFNWTLLQyFPHLHLLDLSRNE 687
Cdd:COG4886 171 LTDLPEE--------LGNLTNLKELDLSNNQITDLPE-PLGNLT-NLEELDLSGNQLTDLPEPLAN-LTNLETLDLSNNQ 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 688 LYFLPNcLSKFaHSLETLLLSHNHFSHLPSgfLSEARNLVHLDLSFNTIKMINKSSLQTKMKTNLSILELHGNYFDCTCD 767
Cdd:COG4886 240 LTDLPE-LGNL-TNLEELDLSNNQLTDLPP--LANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLI 315
|
250 260
....*....|....*....|.
gi 1039796467 768 ISDFRSWLDENLNITIPKLVN 788
Cdd:COG4886 316 LLLLLTTLLLLLLLLKGLLVT 336
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
63-481 |
6.55e-17 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 84.21 E-value: 6.55e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 63 TNIDLSDNAITHITKESFQKLQNLTKIDLNHNAKQQHPNENKNGMNITEGALLSLRNLTVLLLEDNQLYTIPA-GLPESL 141
Cdd:COG4886 19 ELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDlGDLTNL 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 142 KELSLIQNNIFqvtknntFGLRNLERLYLGWNcyfkcnqTFKVEDGAFKNLIHLKVLSLSFNNLFYVPPKLPS--SLRKL 219
Cdd:COG4886 99 TELDLSGNEEL-------SNLTNLESLDLSGN-------QLTDLPEELANLTNLKELDLSNNQLTDLPEPLGNltNLKSL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 220 FLSNAKIMNITQEdFKGLENLTLLDLSGNcprcynapfpctpckensSIHIHPLAFQSLTQLLYLNLSSTSLRTIPSTwF 299
Cdd:COG4886 165 DLSNNQLTDLPEE-LGNLTNLKELDLSNN------------------QITDLPEPLGNLTNLEELDLSGNQLTDLPEP-L 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 300 ENLSNLKELHLEFNylvqEIASGAFLTKLPSLQILDLSFNfqykeylQFINISSNfSKLRSLKKLHLRGYVFRELKKKHF 379
Cdd:COG4886 225 ANLTNLETLDLSNN----QLTDLPELGNLTNLEELDLSNN-------QLTDLPPL-ANLTNLKTLDLSNNQLTDLKLKEL 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 380 EHLQSLPNLATINLGINFIEKIDFKAFQNFSKLDVIYLSGNRIASVLDGTDYSSWRNRLRKPLSTDDDEFDPHVNFYHST 459
Cdd:COG4886 293 ELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLL 372
|
410 420
....*....|....*....|..
gi 1039796467 460 KPLIKPQCTAYGKALDLSLNNI 481
Cdd:COG4886 373 GLLEATLLTLALLLLTLLLLLL 394
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
472-827 |
2.63e-16 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 82.67 E-value: 2.63e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 472 KALDLSLNNIFIIGKSQFEGFQDIACLNLSFNantqvfngTEFSSMPHIKYLDLTNNRLDfDDNNAFSDLHDLEVLDLSH 551
Cdd:COG4886 75 LLLSLLLLSLLLLGLTDLGDLTNLTELDLSGN--------EELSNLTNLESLDLSGNQLT-DLPEELANLTNLKELDLSN 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 552 NahyfsiaGVTHRLGFIQNLINLRVLNLSHNGIYTLTEE-SELKSisLKELVFSGNRLDRLWNAndgkywsiFKSLQNLI 630
Cdd:COG4886 146 N-------QLTDLPEPLGNLTNLKSLDLSNNQLTDLPEElGNLTN--LKELDLSNNQITDLPEP--------LGNLTNLE 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 631 RLDLSYNNLQQIPNgAFLNLPqSLQELLISGNKLRFFNWtlLQYFPHLHLLDLSRNELYFLPNCLSkfAHSLETLLLSHN 710
Cdd:COG4886 209 ELDLSGNQLTDLPE-PLANLT-NLETLDLSNNQLTDLPE--LGNLTNLEELDLSNNQLTDLPPLAN--LTNLKTLDLSNN 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 711 HFSHLPSGFLSEARNLVHLDLSFNTIKMINKSSLQTKMKTNLSILELHGNYFDCTCDISDFRSWLDENLNITIPKLVNVI 790
Cdd:COG4886 283 QLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLL 362
|
330 340 350
....*....|....*....|....*....|....*..
gi 1039796467 791 CSNPGDQKSKSIMSLDLTTCVSDTTAAVLFFLTFLTT 827
Cdd:COG4886 363 LTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAG 399
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
101-552 |
5.56e-15 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 78.44 E-value: 5.56e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 101 NENKNGMNITEGALLSLRNLTVLLLEDNQLYTIPAGLPESLKELSLIQNNIFQVTKNNTFGLRNLERLYLGWNCYFKCN- 179
Cdd:COG4886 2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLl 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 180 -QTFKVEDGAFKNLIHLKVLSLSFNNLFYVPpklpSSLRKLFLSNAKIMNITqEDFKGLENLTLLDLSGNcprcynapfp 258
Cdd:COG4886 82 lSLLLLGLTDLGDLTNLTELDLSGNEELSNL----TNLESLDLSGNQLTDLP-EELANLTNLKELDLSNN---------- 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 259 ctpckensSIHIHPLAFQSLTQLLYLNLSSTSLRTIPStWFENLSNLKELHLEFNYLvQEIasGAFLTKLPSLQILDLSF 338
Cdd:COG4886 147 --------QLTDLPEPLGNLTNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQI-TDL--PEPLGNLTNLEELDLSG 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 339 NfqykeylQFINISSNFSKLRSLKKLHLRGYVFRELkkkhfEHLQSLPNLATINLGINFIEKIDFKAfqNFSKLDVIYLS 418
Cdd:COG4886 215 N-------QLTDLPEPLANLTNLETLDLSNNQLTDL-----PELGNLTNLEELDLSNNQLTDLPPLA--NLTNLKTLDLS 280
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 419 GNRIASVLDGTDYSSWRNRLRKPLSTDDDEFDPHVNFYHSTKPLIKpqctayGKALDLSLNNIFIIGKSQFEGFQDIACL 498
Cdd:COG4886 281 NNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLL------LLLLKGLLVTLTTLALSLSLLALLTLLL 354
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1039796467 499 NLSFNANTQVFNGTEFSSMPHIKYLDLTNNRLDFDDNNAFSDLHDLEVLDLSHN 552
Cdd:COG4886 355 LLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLLLTLALL 408
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
55-415 |
2.29e-14 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 76.51 E-value: 2.29e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 55 PQTIGKYVTNIDLSDNAITHITKESFQKLQNLTKIDLNHNAkqqhpnenkngmnitegALLSLRNLTVLLLEDNQLYTIP 134
Cdd:COG4886 67 LLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE-----------------ELSNLTNLESLDLSGNQLTDLP 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 135 AGLPEslkelsliqnnifqvtknntfgLRNLERLYLGWNcyfkcnqTFKVEDGAFKNLIHLKVLSLSFNNLFYVPPKLP- 213
Cdd:COG4886 130 EELAN----------------------LTNLKELDLSNN-------QLTDLPEPLGNLTNLKSLDLSNNQLTDLPEELGn 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 214 -SSLRKLFLSNAKIMNITQEdFKGLENLTLLDLSGNcprcynapfpctpckENSSIhihPLAFQSLTQLLYLNLSSTSLR 292
Cdd:COG4886 181 lTNLKELDLSNNQITDLPEP-LGNLTNLEELDLSGN---------------QLTDL---PEPLANLTNLETLDLSNNQLT 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 293 TIPstWFENLSNLKELHLEFNylvqEIASGAFLTKLPSLQILDLSFNFQYKEYLQFINISSNFSKLRSLKKLHLRGYVFR 372
Cdd:COG4886 242 DLP--ELGNLTNLEELDLSNN----QLTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLI 315
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1039796467 373 ELKKKHFEHLQSLPNLATINLGINFIEKIDFKAFQNFSKLDVI 415
Cdd:COG4886 316 LLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNL 358
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
868-1004 |
3.12e-14 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 70.82 E-value: 3.12e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 868 YDAYISYdtkdaSVTDWVINELRYHLEESEDKSVLlCLEERDWDPGLPIIDNLMQSINQSKKTIFVLTKKYAKSWNFKTA 947
Cdd:smart00255 2 YDVFISY-----SGKEDVRNEFLSHLLEKLRGYGL-CVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDE 75
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1039796467 948 FYLALQRLMDENMDVIIFILLEPVLQY--SQYLRLRqRICKSSILQWPNNPKAEnlFWQ 1004
Cdd:smart00255 76 LVAALENALEEGGLRVIPIFYEVIPSDvrKQPGKFR-KVFKKNYLKWPEDEKEQ--FWK 131
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
478-849 |
3.91e-14 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 75.74 E-value: 3.91e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 478 LNNIFIIGKSQFEGFQDIACLNLSFNANTQVFNGTEFSSMPHIKYLDLTNNRLDFDDNNAFSDLHDLEVLDLSHNAHYFS 557
Cdd:COG4886 2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 558 IAGVTHRLGFIQNLINLRVLNLSHN-GIYTLTEESEL---------------KSISLKELVFSGNRLDRLWNAndgkyws 621
Cdd:COG4886 82 LSLLLLGLTDLGDLTNLTELDLSGNeELSNLTNLESLdlsgnqltdlpeelaNLTNLKELDLSNNQLTDLPEP------- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 622 iFKSLQNLIRLDLSYNNLQQIPNgAFLNLPQsLQELLISGNKLRFFNWTLLQyFPHLHLLDLSRNELYFLPNCLSKFaHS 701
Cdd:COG4886 155 -LGNLTNLKSLDLSNNQLTDLPE-ELGNLTN-LKELDLSNNQITDLPEPLGN-LTNLEELDLSGNQLTDLPEPLANL-TN 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 702 LETLLLSHNHFSHLPSgfLSEARNLVHLDLSFNTIKMINKSSLqtkmKTNLSILELHGNYFDCTCDISDFRSWLDENLNI 781
Cdd:COG4886 230 LETLDLSNNQLTDLPE--LGNLTNLEELDLSNNQLTDLPPLAN----LTNLKTLDLSNNQLTDLKLKELELLLGLNSLLL 303
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1039796467 782 TIPKLVNVICSNPGDQKSKSIMSLDLTTCVSDTTAAVLFFLTFLTTSMVMLAALVHHLFYWDVWFIYH 849
Cdd:COG4886 304 LLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGL 371
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
141-717 |
2.05e-10 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 64.87 E-value: 2.05e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 141 LKELSLIQNNIFQVTKNNTFGLRNLERLYLGWNcyfkcNQTFKVEDGAFKNLIHLKVLSLSFNNLF-YVPPKLPSSLRKL 219
Cdd:PLN00113 71 VVSIDLSGKNISGKISSAIFRLPYIQTINLSNN-----QLSGPIPDDIFTTSSSLRYLNLSNNNFTgSIPRGSIPNLETL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 220 FLSNAKIMNITQEDFKGLENLTLLDLSGNCprcynapfpctpckenSSIHIhPLAFQSLTQLLYLNLSSTSLR-TIPSTw 298
Cdd:PLN00113 146 DLSNNMLSGEIPNDIGSFSSLKVLDLGGNV----------------LVGKI-PNSLTNLTSLEFLTLASNQLVgQIPRE- 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 299 FENLSNLKELHLEFNYLVQEIASGafLTKLPSLQILDLSFNfqykeylqfiNISSNF-SKLRSLKKLHlrgYVF---REL 374
Cdd:PLN00113 208 LGQMKSLKWIYLGYNNLSGEIPYE--IGGLTSLNHLDLVYN----------NLTGPIpSSLGNLKNLQ---YLFlyqNKL 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 375 KKKHFEHLQSLPNLATINLGINFIEKIDFKAFQNFSKLDVIYLSGNRIASVLDGTDYSS--------WRNRLRKPLSTDd 446
Cdd:PLN00113 273 SGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLprlqvlqlWSNKFSGEIPKN- 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 447 deFDPHVNFyhstkplikpqctaygKALDLSLNNI----------------FIIGKSQFEGfqDI-----ACLNLS-FNA 504
Cdd:PLN00113 352 --LGKHNNL----------------TVLDLSTNNLtgeipeglcssgnlfkLILFSNSLEG--EIpkslgACRSLRrVRL 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 505 NTQVFNG---TEFSSMPHIKYLDLTNNRLDFDDNNAFSDLHDLEVLDLSHNAHYfsiAGVTHRLGfiqnLINLRVLNLSH 581
Cdd:PLN00113 412 QDNSFSGelpSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFF---GGLPDSFG----SKRLENLDLSR 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 582 NGIYTLTEESELKSISLKELVFSGNRLdrlwnanDGKYWSIFKSLQNLIRLDLSYNNLqqipNGaflNLPQSLQEllisg 661
Cdd:PLN00113 485 NQFSGAVPRKLGSLSELMQLKLSENKL-------SGEIPDELSSCKKLVSLDLSHNQL----SG---QIPASFSE----- 545
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 1039796467 662 nklrffnwtllqyFPHLHLLDLSRNELYF-LPNCLSKfAHSLETLLLSHNHF-SHLPS 717
Cdd:PLN00113 546 -------------MPVLSQLDLSQNQLSGeIPKNLGN-VESLVQVNISHNHLhGSLPS 589
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
264-760 |
1.01e-09 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 62.94 E-value: 1.01e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 264 ENSSIHIHPLAFQsLTQLLYLNLSSTSLR-TIPSTWFENLSNLKELHLEFNYLVQEIASGAfltkLPSLQILDLSFNFQY 342
Cdd:PLN00113 79 KNISGKISSAIFR-LPYIQTINLSNNQLSgPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGS----IPNLETLDLSNNMLS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 343 KEY---------LQFINISSNF---------SKLRSLKKL-----HLRGYVFRELKKkhfehlqsLPNLATINLGINFIE 399
Cdd:PLN00113 154 GEIpndigsfssLKVLDLGGNVlvgkipnslTNLTSLEFLtlasnQLVGQIPRELGQ--------MKSLKWIYLGYNNLS 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 400 ---KIDFKAFQNFSKLDVIY--LSGNRIASVLDGTDYSS---WRNRLRKPLstdddefdPHVNFyhSTKPLIkpqctayg 471
Cdd:PLN00113 226 geiPYEIGGLTSLNHLDLVYnnLTGPIPSSLGNLKNLQYlflYQNKLSGPI--------PPSIF--SLQKLI-------- 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 472 kALDLSLNNIFIIGKSQFEGFQDIACLNLSFNANTQVFNGTeFSSMPHIKYLDLTNNRLDFDDNNAFSDLHDLEVLDLSH 551
Cdd:PLN00113 288 -SLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVA-LTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLST 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 552 NahyfSIAG-VTHRLGFIQNLINLRVLNLSHNGIY--TLTEESELKSISLKELVFSGnrldrlwnandgKYWSIFKSLQN 628
Cdd:PLN00113 366 N----NLTGeIPEGLCSSGNLFKLILFSNSLEGEIpkSLGACRSLRRVRLQDNSFSG------------ELPSEFTKLPL 429
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 629 LIRLDLSYNNLQ--------QIP---------NGAFLNLPQS-----LQELLISGNKLRFFNWTLLQYFPHLHLLDLSRN 686
Cdd:PLN00113 430 VYFLDISNNNLQgrinsrkwDMPslqmlslarNKFFGGLPDSfgskrLENLDLSRNQFSGAVPRKLGSLSELMQLKLSEN 509
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1039796467 687 ELY-FLPNCLSKfAHSLETLLLSHNHFS-HLPSGFlSEARNLVHLDLSFNTIK---MINKSSLQTKMKTNLSILELHGN 760
Cdd:PLN00113 510 KLSgEIPDELSS-CKKLVSLDLSHNQLSgQIPASF-SEMPVLSQLDLSQNQLSgeiPKNLGNVESLVQVNISHNHLHGS 586
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
105-249 |
2.05e-09 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 58.64 E-value: 2.05e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 105 NGMNITE-GALLSLRNLTVLLLEDNQLYTIPaGLP--ESLKELSLIQNNIfqvTK-NNTFGLRNLERLYLGwncyfkCNQ 180
Cdd:cd21340 10 NDKNITKiDNLSLCKNLKVLYLYDNKITKIE-NLEflTNLTHLYLQNNQI---EKiENLENLVNLKKLYLG------GNR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 181 TFKVEDgaFKNLIHLKVLSLSFNNLfyvPPKLP------------SSLRKLFLSNAKIMNItqEDFKGLENLTLLDLSGN 248
Cdd:cd21340 80 ISVVEG--LENLTNLEELHIENQRL---PPGEKltfdprslaalsNSLRVLNISGNNIDSL--EPLAPLRNLEQLDASNN 152
|
.
gi 1039796467 249 C 249
Cdd:cd21340 153 Q 153
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
270-715 |
3.50e-09 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 60.33 E-value: 3.50e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 270 IHPLAFQSLTQLLYLNLSSTSLRTIPSTWFENLSNLKELHLEFNYLVQEIASGAFLTKLPSLQILDLSFNfqykeylqfi 349
Cdd:COG4886 37 LLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGN---------- 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 350 nisSNFSKLRSLKKLHLRGYVFRELkkkhFEHLQSLPNLATINLGINFIEKIDfKAFQNFSKLDVIYLSGNRIASVldgt 429
Cdd:COG4886 107 ---EELSNLTNLESLDLSGNQLTDL----PEELANLTNLKELDLSNNQLTDLP-EPLGNLTNLKSLDLSNNQLTDL---- 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 430 dysswrnrlrkplstdDDEFDPHVNFyhstkplikpqctaygKALDLSLNNIfiigksqfegfQDIaclnlsfnantqvf 509
Cdd:COG4886 175 ----------------PEELGNLTNL----------------KELDLSNNQI-----------TDL-------------- 197
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 510 nGTEFSSMPHIKYLDLTNNRLDfDDNNAFSDLHDLEVLDLSHNAhyfsiagVTHrLGFIQNLINLRVLNLSHNGIYTLTE 589
Cdd:COG4886 198 -PEPLGNLTNLEELDLSGNQLT-DLPEPLANLTNLETLDLSNNQ-------LTD-LPELGNLTNLEELDLSNNQLTDLPP 267
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 590 ESELKsiSLKELVFSGNRLDRLWNANDGKYWSIFKSLQNLIRLDLSYNNLQQIPNGAFLNLPQSLQELLISGNKLRFFNW 669
Cdd:COG4886 268 LANLT--NLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLS 345
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1039796467 670 TLLQYFPHLHLLDLSRNELYFLPNCLSKFAHSLETLLLSHNHFSHL 715
Cdd:COG4886 346 LLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLL 391
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
47-231 |
3.89e-09 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 60.87 E-value: 3.89e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 47 NHRQLHEVPQTIGKYVTNIDLSDNAITHITKESFQKLQNLtkiDLNHNAKQQHPNenkngmNITEGallsLRNLTVLlle 126
Cdd:PRK15370 228 NSNQLTSIPATLPDTIQEMELSINRITELPERLPSALQSL---DLFHNKISCLPE------NLPEE----LRYLSVY--- 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 127 DNQLYTIPAGLPESLKELSLIQNNIFQVTKNNTFGLRNLErlylgwncyfkcnqtfkVEDGAFKNL-----IHLKVLSLS 201
Cdd:PRK15370 292 DNSIRTLPAHLPSGITHLNVQSNSLTALPETLPPGLKTLE-----------------AGENALTSLpaslpPELQVLDVS 354
|
170 180 190
....*....|....*....|....*....|
gi 1039796467 202 FNNLFYVPPKLPSSLRKLFLSNAKIMNITQ 231
Cdd:PRK15370 355 KNQITVLPETLPPTITTLDVSRNALTNLPE 384
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
871-982 |
5.26e-09 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 55.01 E-value: 5.26e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 871 YISYDTKDASVTDWVINELryhleesEDKSVLLCLEERDWDPGLPIIDNLMQSINQSKKTIFVLTKKYAKSWNFKTAFYL 950
Cdd:pfam13676 2 FISYAGEDRAWAEWLADAL-------EAAGYRVWLDRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEA 74
|
90 100 110
....*....|....*....|....*....|....*..
gi 1039796467 951 ALQRLMDENmdVIIFILLE-----PVLQYSQYLRLRQ 982
Cdd:pfam13676 75 ALADPEGRK--RLIPVRLEcdlelPGLAGLQYIDLRD 109
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
868-986 |
5.42e-09 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 56.22 E-value: 5.42e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 868 YDAYISYDTKDasVTDWVINELRYHLEEsedKSVLLCLEERDWDPGLPIIDNLMQSINQSKKTIFVLTKKYAKS-WN--- 943
Cdd:pfam01582 1 YDVFLSFRGSD--TREWFVSHLLKELKQ---KGIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSgWClde 75
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1039796467 944 FKTAFYLALQRLMdenmdVIIFILLEPVLQYSQ-----YLRLRQRICK 986
Cdd:pfam01582 76 LVKILECALDLGQ-----KVIPIFYEVDPSDVRkqtgsFGKAFKKHKK 118
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
46-356 |
8.54e-08 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 55.71 E-value: 8.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 46 CNHRQLHEVPQTIGKYV--TNIDLSDNAITHITkESFQKLQNLTKIDLNHNakqqhpnenkngmNITE--GALLSLRNLT 121
Cdd:COG4886 143 LSNNQLTDLPEPLGNLTnlKSLDLSNNQLTDLP-EELGNLTNLKELDLSNN-------------QITDlpEPLGNLTNLE 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 122 VLLLEDNQLYTIPAGLPeslkelsliqnnifqvtknntfGLRNLERLYLGWNcyfkcnqtfKVED-GAFKNLIHLKVLSL 200
Cdd:COG4886 209 ELDLSGNQLTDLPEPLA----------------------NLTNLETLDLSNN---------QLTDlPELGNLTNLEELDL 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 201 SFNNLFYVPPKLP-SSLRKLFLSNAKIMNITQEDFKGLENLTLLDLSGNcpRCYNAPFPCTPCKENSSIHIHPLAFQSLT 279
Cdd:COG4886 258 SNNQLTDLPPLANlTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLL--LLNLLELLILLLLLTTLLLLLLLLKGLLV 335
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1039796467 280 QLLYLNLSSTSLRTIPSTWFENLSNLKELHLEFNYLVQEIASGAFLTKLPSLQILDLSFNFQYKEYLQFINISSNFS 356
Cdd:COG4886 336 TLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLLLTLALLDAVN 412
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
29-249 |
2.22e-07 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 53.90 E-value: 2.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 29 RSYPCDEIRHNSLVIAECNHRQLHEVPQTIGKYV--TNIDLSDNAITHITKESFQKLQ---NLTKIDLNHNAkqqhpnEN 103
Cdd:cd00116 48 RPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCglQELDLSDNALGPDGCGVLESLLrssSLQELKLNNNG------LG 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 104 KNGMNITEGALLSLR-NLTVLLLEDNQLY---TIPAG--LPE--SLKELSLIQNNIfqvtknNTFGLR----------NL 165
Cdd:cd00116 122 DRGLRLLAKGLKDLPpALEKLVLGRNRLEgasCEALAkaLRAnrDLKELNLANNGI------GDAGIRalaeglkancNL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 166 ERLYLgWNCYFKCNQTFKVEdGAFKNLIHLKVLSLSFNNLFYVP--------PKLPSSLRKLFLSNAKimnITQEDFKGL 237
Cdd:cd00116 196 EVLDL-NNNGLTDEGASALA-ETLASLKSLEVLNLGDNNLTDAGaaalasalLSPNISLLTLSLSCND---ITDDGAKDL 270
|
250
....*....|....*....
gi 1039796467 238 -------ENLTLLDLSGNC 249
Cdd:cd00116 271 aevlaekESLLELDLRGNK 289
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
543-762 |
2.34e-07 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 53.90 E-value: 2.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 543 DLEVLDLSHNAHYFSIAGVTHRLGFIQNLINLRVLNLSHNGIYTLTE---ESELKSISLKELVFSGNRLDrlwnanDGKY 619
Cdd:cd00116 52 SLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCgvlESLLRSSSLQELKLNNNGLG------DRGL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 620 WSIFKSLQ----NLIRLDLSYNNLQQ---IPNGAFLNLPQSLQELLISGNKLRFFNWTLL----QYFPHLHLLDLSRNEL 688
Cdd:cd00116 126 RLLAKGLKdlppALEKLVLGRNRLEGascEALAKALRANRDLKELNLANNGIGDAGIRALaeglKANCNLEVLDLNNNGL 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 689 -----YFLPNCLSKFAhSLETLLLSHNHF-----SHLPSGFLSEARNLVHLDLSFNTIKMINKSSLQTKMKTNLSI--LE 756
Cdd:cd00116 206 tdegaSALAETLASLK-SLEVLNLGDNNLtdagaAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLleLD 284
|
....*.
gi 1039796467 757 LHGNYF 762
Cdd:cd00116 285 LRGNKF 290
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
597-664 |
3.15e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 48.29 E-value: 3.15e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1039796467 597 SLKELVFSGNRLDRLwnandgkYWSIFKSLQNLIRLDLSYNNLQQIPNGAFLNLPqSLQELLISGNKL 664
Cdd:pfam13855 2 NLRSLDLSNNRLTSL-------DDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLP-SLRYLDLSGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
65-582 |
3.48e-07 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 54.47 E-value: 3.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 65 IDLSDNAITHITKESFQKLQNLTKIDLNHNAKQQHpnenkngmniTEGALLSLRNLTVLLLEDNQLYtipAGLPESLKEL 144
Cdd:PLN00113 145 LDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGK----------IPNSLTNLTSLEFLTLASNQLV---GQIPRELGQM 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 145 sliqnnifqvtknntfglRNLERLYLGWNcyfKCNQTFKVEDGAFKNLIHLkvlSLSFNNLF-YVPPKLP--SSLRKLFL 221
Cdd:PLN00113 212 ------------------KSLKWIYLGYN---NLSGEIPYEIGGLTSLNHL---DLVYNNLTgPIPSSLGnlKNLQYLFL 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 222 SNAKIMNITQEDFKGLENLTLLDLSGNcprcynapfpctpckeNSSIHIHPLAFQsLTQLLYLNLSSTSLR-TIPSTwFE 300
Cdd:PLN00113 268 YQNKLSGPIPPSIFSLQKLISLDLSDN----------------SLSGEIPELVIQ-LQNLEILHLFSNNFTgKIPVA-LT 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 301 NLSNLKELHLEFNYLVQEIAsgAFLTKLPSLQILDLSFNFQYKEYLQFINISSNFSKLrSLKKLHLRGyvfrELKKKhfe 380
Cdd:PLN00113 330 SLPRLQVLQLWSNKFSGEIP--KNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKL-ILFSNSLEG----EIPKS--- 399
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 381 hLQSLPNLATINLGINfieKIDFKAFQNFSKLDVIY---LSGNRIASVLDGtdySSWRNRLRKPLSTDDDEFDPHVNFYH 457
Cdd:PLN00113 400 -LGACRSLRRVRLQDN---SFSGELPSEFTKLPLVYfldISNNNLQGRINS---RKWDMPSLQMLSLARNKFFGGLPDSF 472
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 458 STKPLikpqctaygKALDLSLNNIFIIGKSQFEGFQDIACLNLSFNANTQVFNgTEFSSMPHIKYLDLTNNRLDFDDNNA 537
Cdd:PLN00113 473 GSKRL---------ENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIP-DELSSCKKLVSLDLSHNQLSGQIPAS 542
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 1039796467 538 FSDLHDLEVLDLSHNahyfSIAG-VTHRLGFIQNLINlrvLNLSHN 582
Cdd:PLN00113 543 FSEMPVLSQLDLSQN----QLSGeIPKNLGNVESLVQ---VNISHN 581
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
118-339 |
3.57e-07 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 54.32 E-value: 3.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 118 RNLTVLLLEDNQLYTIPAGLPESLKELSLIQNNIFQVTKNntfgLR-NLERLYLGWNCYFKCNQTFKVEdgafknlihLK 196
Cdd:PRK15370 178 NNKTELRLKILGLTTIPACIPEQITTLILDNNELKSLPEN----LQgNIKTLYANSNQLTSIPATLPDT---------IQ 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 197 VLSLSFNNLFYVPPKLPSSLRKLFLSNAKIMNITQEDFKGLENLTLLDlsgNCPRCYNAPFPctpckenSSIhihplafq 276
Cdd:PRK15370 245 EMELSINRITELPERLPSALQSLDLFHNKISCLPENLPEELRYLSVYD---NSIRTLPAHLP-------SGI-------- 306
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1039796467 277 sltqlLYLNLSSTSLRTIPSTWFENLSNLkelhlefnylvqeIASGAFLTKL-----PSLQILDLSFN 339
Cdd:PRK15370 307 -----THLNVQSNSLTALPETLPPGLKTL-------------EAGENALTSLpaslpPELQVLDVSKN 356
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
498-552 |
3.91e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.90 E-value: 3.91e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 1039796467 498 LNLSFNaNTQVFNGTEFSSMPHIKYLDLTNNRLDFDDNNAFSDLHDLEVLDLSHN 552
Cdd:pfam13855 6 LDLSNN-RLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGN 59
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
39-214 |
4.46e-07 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 53.93 E-value: 4.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 39 NSLVIAECNHRQLHEVPQTIGKYVTNIDLSDNAITHITKESFQKLQNLTKIDLNHNAKQQHPNENKNGMNITEGALLSL- 117
Cdd:PRK15370 241 DTIQEMELSINRITELPERLPSALQSLDLFHNKISCLPENLPEELRYLSVYDNSIRTLPAHLPSGITHLNVQSNSLTALp 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 118 ----RNLTVLLLEDNQLYTIPAGLPESLKELSLIQNNIFQVTKNNTFGLrnlerlylgwncyfkcnQTFKVEDGAFKNLI 193
Cdd:PRK15370 321 etlpPGLKTLEAGENALTSLPASLPPELQVLDVSKNQITVLPETLPPTI-----------------TTLDVSRNALTNLP 383
|
170 180
....*....|....*....|....*.
gi 1039796467 194 H-----LKVLSLSFNNLFYVPPKLPS 214
Cdd:PRK15370 384 EnlpaaLQIMQASRNNLVRLPESLPH 409
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
627-688 |
5.73e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.52 E-value: 5.73e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1039796467 627 QNLIRLDLSYNNLQQIPNGAFLNLPqSLQELLISGNKLRFFNWTLLQYFPHLHLLDLSRNEL 688
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLS-NLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
119-317 |
8.59e-07 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 53.16 E-value: 8.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 119 NLTVLLLEDNQLYTIPAGLPESLKELSLIQNNIFQVTKNNTFGLRNLErlylgwncyFKCNQTFKVEDgafkNLIH-LKV 197
Cdd:PRK15370 221 NIKTLYANSNQLTSIPATLPDTIQEMELSINRITELPERLPSALQSLD---------LFHNKISCLPE----NLPEeLRY 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 198 LSLSFNNLFYVPPKLPSSLRKLFLSNAKIMNITQEDFKGLENLTLLDlsgNCPRCYNAPFPctPCKENSS-----IHIHP 272
Cdd:PRK15370 288 LSVYDNSIRTLPAHLPSGITHLNVQSNSLTALPETLPPGLKTLEAGE---NALTSLPASLP--PELQVLDvsknqITVLP 362
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1039796467 273 LAFQSLTQLLYlnLSSTSLRTIPstwfENL-SNLKELHLEFNYLVQ 317
Cdd:PRK15370 363 ETLPPTITTLD--VSRNALTNLP----ENLpAALQIMQASRNNLVR 402
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
279-339 |
2.15e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 45.98 E-value: 2.15e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1039796467 279 TQLLYLNLSSTSLRTIPSTWFENLSNLKELHLEFNYLvQEIASGAFlTKLPSLQILDLSFN 339
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL-TTLSPGAF-SGLPSLRYLDLSGN 59
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
568-760 |
2.46e-06 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 49.78 E-value: 2.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 568 IQNLI---NLRVLNLSHNGIYTLTEESELKSisLKELVFSGNRLDRLWNandgkywsiFKSLQNLIRLDLSYNNLQQIPN 644
Cdd:cd21340 17 IDNLSlckNLKVLYLYDNKITKIENLEFLTN--LTHLYLQNNQIEKIEN---------LENLVNLKKLYLGGNRISVVEG 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 645 gafLNLPQSLQELLISGNKLRffnwtllqyfphlhlldlSRNELYFLPNCLSKFAHSLETLLLSHNHFSHLpsGFLSEAR 724
Cdd:cd21340 86 ---LENLTNLEELHIENQRLP------------------PGEKLTFDPRSLAALSNSLRVLNISGNNIDSL--EPLAPLR 142
|
170 180 190
....*....|....*....|....*....|....*.
gi 1039796467 725 NLVHLDLSFNTIKMINKSSLQTKMKTNLSILELHGN 760
Cdd:cd21340 143 NLEQLDASNNQISDLEELLDLLSSWPSLRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
62-130 |
4.81e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 44.82 E-value: 4.81e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1039796467 62 VTNIDLSDNAITHITKESFQKLQNLTKIDLNHNAKQQhpnenkngmnITEGALLSLRNLTVLLLEDNQL 130
Cdd:pfam13855 3 LRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTT----------LSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
269-315 |
5.05e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 44.82 E-value: 5.05e-06
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 1039796467 269 HIHPLAFQSLTQLLYLNLSSTSLRTIPSTWFENLSNLKELHLEFNYL 315
Cdd:pfam13855 15 SLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
518-584 |
5.41e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 44.82 E-value: 5.41e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1039796467 518 PHIKYLDLTNNRLDFDDNNAFSDLHDLEVLDLSHNahyfSIAGVthRLGFIQNLINLRVLNLSHNGI 584
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNN----LLTTL--SPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
215-368 |
1.60e-05 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 47.09 E-value: 1.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 215 SLRKLFLSNAKIMNItqEDFKGLENLTLLDLSGNCPRCYnapfpctpckENssihihplaFQSLTQLLYLNLSSTSLRTI 294
Cdd:cd21340 25 NLKVLYLYDNKITKI--ENLEFLTNLTHLYLQNNQIEKI----------EN---------LENLVNLKKLYLGGNRISVV 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 295 PStwFENLSNLKELHLEFnylvQEIASGAFLTKLP--------SLQILDLSFN-------FQYKEYLQFINISSN----- 354
Cdd:cd21340 84 EG--LENLTNLEELHIEN----QRLPPGEKLTFDPrslaalsnSLRVLNISGNnidslepLAPLRNLEQLDASNNqisdl 157
|
170 180
....*....|....*....|
gi 1039796467 355 ------FSKLRSLKKLHLRG 368
Cdd:cd21340 158 eelldlLSSWPSLRELDLTG 177
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
627-764 |
2.15e-05 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 48.54 E-value: 2.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 627 QNLIRLDLSYNNLQQIPNgaflNLPQSLQELLISGNKLRFFNWTLlqyfPH-LHLLDLSRNELYFLPNCLSKfahSLETL 705
Cdd:PRK15370 199 EQITTLILDNNELKSLPE----NLQGNIKTLYANSNQLTSIPATL----PDtIQEMELSINRITELPERLPS---ALQSL 267
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1039796467 706 LLSHNHFSHLPSGFLSEARNL-----------VHLDLSFNTIKMINKS--SLQTKMKTNLSILELHGNYFDC 764
Cdd:PRK15370 268 DLFHNKISCLPENLPEELRYLsvydnsirtlpAHLPSGITHLNVQSNSltALPETLPPGLKTLEAGENALTS 339
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
163-248 |
7.44e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 41.36 E-value: 7.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 163 RNLERLYLGwncyfkCNQTFKVEDGAFKNLIHLKVLSLSFNNLFYVPPklpsslrklflsnakimnitqEDFKGLENLTL 242
Cdd:pfam13855 1 PNLRSLDLS------NNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSP---------------------GAFSGLPSLRY 53
|
....*.
gi 1039796467 243 LDLSGN 248
Cdd:pfam13855 54 LDLSGN 59
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
514-662 |
7.72e-05 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 45.16 E-value: 7.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 514 FSSMPHIKYLDLTNNRLDFDDNnaFSDLHDLEVLDLSHNahyfSIAgvthRLGFIQNLINLRVLNLSHNgiyTLTEESEL 593
Cdd:cd21340 42 LEFLTNLTHLYLQNNQIEKIEN--LENLVNLKKLYLGGN----RIS----VVEGLENLTNLEELHIENQ---RLPPGEKL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 594 -------KSI--SLKELVFSGNRLDRLwnandgkywSIFKSLQNLIRLDLSYNNLQQIPN--GAFLNLPQsLQELLISGN 662
Cdd:cd21340 109 tfdprslAALsnSLRVLNISGNNIDSL---------EPLAPLRNLEQLDASNNQISDLEEllDLLSSWPS-LRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
214-291 |
9.71e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 40.97 E-value: 9.71e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1039796467 214 SSLRKLFLSNAKIMNITQEDFKGLENLTLLDLSGNCPRcynapfpctpckenssiHIHPLAFQSLTQLLYLNLSSTSL 291
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLT-----------------TLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
345-528 |
1.86e-04 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 44.01 E-value: 1.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 345 YLQFINISS--NFSKLRSLKKLHLRGYVFRELkkkhfEHLQSLPNLATINLGINFIEKIDFkaFQNFSKLDVIYLSGNRI 422
Cdd:cd21340 8 YLNDKNITKidNLSLCKNLKVLYLYDNKITKI-----ENLEFLTNLTHLYLQNNQIEKIEN--LENLVNLKKLYLGGNRI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 423 aSVLDGTDYSSW-------RNRLRKPLSTdddEFDPHVNFYHSTKPLIkpqctaygkaLDLSLNNIFIIgkSQFEGFQDI 495
Cdd:cd21340 81 -SVVEGLENLTNleelhieNQRLPPGEKL---TFDPRSLAALSNSLRV----------LNISGNNIDSL--EPLAPLRNL 144
|
170 180 190
....*....|....*....|....*....|....*..
gi 1039796467 496 ACLNLSFNantQVFNGTE----FSSMPHIKYLDLTNN 528
Cdd:cd21340 145 EQLDASNN---QISDLEElldlLSSWPSLRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
359-422 |
2.72e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 39.82 E-value: 2.72e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1039796467 359 RSLKKLHLRGYVFRELKKKHFEHLqslPNLATINLGINFIEKIDFKAFQNFSKLDVIYLSGNRI 422
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGL---SNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
571-758 |
5.59e-04 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 43.63 E-value: 5.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 571 LINLRVLNLSHNGIYTLTEESElKSISLKELVFSGNRLDrlwnaNDGKYwSIFKSLQNLIR---LDLSYNnlqQIPNGAF 647
Cdd:COG5238 184 TVYLGCNQIGDEGIEELAEALT-QNTTVTTLWLKRNPIG-----DEGAE-ILAEALKGNKSlttLDLSNN---QIGDEGV 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 648 LNLPQSLQE------LLISGNKL-----RFFNwTLLQYFPHLHLLDLSRNELYF-----LPNCLSKfAHSLETLLLSHNH 711
Cdd:COG5238 254 IALAEALKNnttvetLYLSGNQIgaegaIALA-KALQGNTTLTSLDLSVNRIGDegaiaLAEGLQG-NKTLHTLNLAYNG 331
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1039796467 712 FSHLPSGFLSEA----RNLVHLDLSFNTIKMINKSSLQTKMKTNLSILELH 758
Cdd:COG5238 332 IGAQGAIALAKAlqenTTLHSLDLSDNQIGDEGAIALAKYLEGNTTLRELN 382
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
474-530 |
1.08e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 38.27 E-value: 1.08e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 1039796467 474 LDLSLNNIFIIGKSQFEGFQDIACLNLSFNaNTQVFNGTEFSSMPHIKYLDLTNNRL 530
Cdd:pfam13855 6 LDLSNNRLTSLDDGAFKGLSNLKVLDLSNN-LLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
303-368 |
1.52e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.89 E-value: 1.52e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1039796467 303 SNLKELHLEFNYLvQEIASGAFlTKLPSLQILDLSFNfqykeYLQFINISSnFSKLRSLKKLHLRG 368
Cdd:pfam13855 1 PNLRSLDLSNNRL-TSLDDGAF-KGLSNLKVLDLSNN-----LLTTLSPGA-FSGLPSLRYLDLSG 58
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
676-734 |
1.63e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.89 E-value: 1.63e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 1039796467 676 PHLHLLDLSRNELYFLPNCLSKFAHSLETLLLSHNHFSHLPSGFLSEARNLVHLDLSFN 734
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGN 59
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
63-203 |
2.80e-03 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 40.54 E-value: 2.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 63 TNIDLSDNAITHItkESFQKLQNLTKIDLNHNakqqhpnenkngmNIT--EGaLLSLRNLTVLLLEDNQL---------- 130
Cdd:cd21340 49 THLYLQNNQIEKI--ENLENLVNLKKLYLGGN-------------RISvvEG-LENLTNLEELHIENQRLppgekltfdp 112
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1039796467 131 YTIpAGLPESLKELSLIQNNIfqVTKNNTFGLRNLERLYLGWNCYfkcnQTFKVEDGAFKNLIHLKVLSLSFN 203
Cdd:cd21340 113 RSL-AALSNSLRVLNISGNNI--DSLEPLAPLRNLEQLDASNNQI----SDLEELLDLLSSWPSLRELDLTGN 178
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
515-664 |
5.44e-03 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 40.03 E-value: 5.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 515 SSMPHIKYLDLTNNRLD----FDDNNAFSDLHDLEVLDLSHNAhyFSIAGVTHRLGFIQNLINLRVLNLSHNGIytlTEE 590
Cdd:cd00116 134 DLPPALEKLVLGRNRLEgascEALAKALRANRDLKELNLANNG--IGDAGIRALAEGLKANCNLEVLDLNNNGL---TDE 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 591 -----SE-LKS-ISLKELVFSGNRLDrlwNANDGKYWSIFKSL-QNLIRLDLSYNNLQQIPNGAFLN-LPQ--SLQELLI 659
Cdd:cd00116 209 gasalAEtLASlKSLEVLNLGDNNLT---DAGAAALASALLSPnISLLTLSLSCNDITDDGAKDLAEvLAEkeSLLELDL 285
|
....*
gi 1039796467 660 SGNKL 664
Cdd:cd00116 286 RGNKF 290
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
701-762 |
6.23e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.96 E-value: 6.23e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1039796467 701 SLETLLLSHNHFSHLPSGFLSEARNLVHLDLSFNTIKMINKSSLQtKMKtNLSILELHGNYF 762
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFS-GLP-SLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
274-425 |
8.65e-03 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 39.65 E-value: 8.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 274 AFQSLTQLLYLNLSSTSLRTIPSTWFENL---SNLKELHLEFNYLvqEIASGAFLTK-----LPSLQILDLSFNFQYKEY 345
Cdd:cd00116 76 GLTKGCGLQELDLSDNALGPDGCGVLESLlrsSSLQELKLNNNGL--GDRGLRLLAKglkdlPPALEKLVLGRNRLEGAS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039796467 346 LqfINISSNFSKLRSLKKLHL-----RGYVFRELkkkhFEHLQSLPNLATINLGINFIEKIDFKA----FQNFSKLDVIY 416
Cdd:cd00116 154 C--EALAKALRANRDLKELNLanngiGDAGIRAL----AEGLKANCNLEVLDLNNNGLTDEGASAlaetLASLKSLEVLN 227
|
....*....
gi 1039796467 417 LSGNRIASV 425
Cdd:cd00116 228 LGDNNLTDA 236
|
|
| |
