|
Name |
Accession |
Description |
Interval |
E-value |
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
897-1075 |
1.87e-09 |
|
HEAT repeat [General function prediction only];
:
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 56.95 E-value: 1.87e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 897 VKASAAWALCpcIKNAKDAgemvrsfvggLELIVNLLKSDNKEVLASVCAAitniakdqenLAVITDHGVVPLLSKLANT 976
Cdd:COG1413 1 VRRAAARALG--RLGDPAA----------VPALIAALADEDPDVRAAAARA----------LGRLGDPRAVPALLEALKD 58
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 977 NNNKLRHHLAEAISRccmwgrnrvaFGEHKAVAPLVRYLKSNDTNVHRATAQALYQLSEDAdncitmhengAVKLLLDMV 1056
Cdd:COG1413 59 PDPEVRAAAAEALGR----------IGDPEAVPALIAALKDEDPEVRRAAAEALGRLGDPA----------AVPALLEAL 118
|
170
....*....|....*....
gi 1370457304 1057 GSPDQDLQEAAAGCISNIR 1075
Cdd:COG1413 119 KDPDWEVRRAAARALGRLG 137
|
|
| SRP1 super family |
cl34886 |
Karyopherin (importin) alpha [Intracellular trafficking and secretion]; |
657-1085 |
6.05e-07 |
|
Karyopherin (importin) alpha [Intracellular trafficking and secretion];
The actual alignment was detected with superfamily member COG5064:
Pssm-ID: 227396 [Multi-domain] Cd Length: 526 Bit Score: 53.36 E-value: 6.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 657 QECASEENYRAAIKAERIIENLVKNLNSENEQLQeHCAMAIYQCAEDKETR---DLVRLHGGLKPLASLLNNTDNKERLA 733
Cdd:COG5064 55 SEEAESSFIPMEQQFYSELPQLTQQLFSDDIEQQ-LQAVYKFRKLLSKETSppiQPVIDAGVVPRFVEFMDEIQRDMLQF 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 734 AVTGAIWKCSISKENVTKFR-EYKAIETLVGLLTDQPEEVLVNVVGALGECCQEREN-RVIVRKCGGIQPLVNLLV--GI 809
Cdd:COG5064 134 EAAWALTNIASGTTQQTKVVvDAGAVPLFIQLLSSTEDDVREQAVWALGNIAGDSEGcRDYVLQCGALEPLLGLLLssAI 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 810 NQALLVNVTkavgacavepesmmWGLtlssrlkySGMMRGhcslkllgSSDPPNFVFFRSrklrnriidrldGVRLLWSL 889
Cdd:COG5064 214 HISMLRNAT--------------WTL--------SNLCRG--------KNPPPDWSNISQ------------ALPILAKL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 890 LKNPHPDVKASAAWALC-------PCIKNAKDAGEMVRsfvgglelIVNLLKSDNKEVLASVCAAITNIAK-DQENLAVI 961
Cdd:COG5064 252 IYSRDPEVLVDACWAISylsdgpnEKIQAVLDVGIPGR--------LVELLSHESAKIQTPALRSVGNIVTgSDDQTQVI 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 962 TDHGVVPLLSKLANTNNNKLRHHLAEAISRCCMWGRNRV-AFGEHKAVAPLVRYLKSNDTNVHR----ATAQALYQLSED 1036
Cdd:COG5064 324 INCGALKAFRSLLSSPKENIRKEACWTISNITAGNTEQIqAVIDANLIPPLIHLLSSAEYKIKKeacwAISNATSGGLNR 403
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1370457304 1037 ADNCITMHENGAVKLLLDMVGSPDQDLQEAAAGCISNIRRLALATEKAR 1085
Cdd:COG5064 404 PDIIRYLVSQGFIKPLCDLLDVVDNKIIEVALDAIENILKVGEQDRLRY 452
|
|
| Arm |
pfam00514 |
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
624-661 |
6.55e-04 |
|
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.
:
Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 38.20 E-value: 6.55e-04
10 20 30
....*....|....*....|....*....|....*...
gi 1370457304 624 NKEAIRKAGGIPLLARLLKTSHENMLIPVVGTLQECAS 661
Cdd:pfam00514 4 NKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLAA 41
|
|
| PLN03200 super family |
cl33659 |
cellulose synthase-interactive protein; Provisional |
449-684 |
9.73e-04 |
|
cellulose synthase-interactive protein; Provisional
The actual alignment was detected with superfamily member PLN03200:
Pssm-ID: 215629 [Multi-domain] Cd Length: 2102 Bit Score: 43.55 E-value: 9.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 449 SEYWQ---IQKLVKYLKGGNQTATVIALCSMRDFSLAQETCQLAIRDVGGLEVLINLLETDEvkCKIGSLKILKEISHNP 525
Cdd:PLN03200 1644 SEYYFevpVAVLVKLLRSTSESTVVVALNALLVLERDDSSSAEQMAESGAIEALLELLRSHQ--CEEAAARLLEALFNNV 1721
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 526 QIRQ-NIVDLGGLPIMVNILDsPH---KSLKCLAAETIANVAkfkrarrvvrQHGGITKlvalldcAHDSTKP--AQSSL 599
Cdd:PLN03200 1722 KVREmKATKYAIAPLSQYLLD-PQtrsQQARLLAALALGDLF----------QHEGLAR-------STDAVSAcrALVSL 1783
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 600 YEARDVE----VARCGALALWSCSKshTNKEAIRKAGGIPLLARLLKTSHEN------MLIPVV---GTLQECASEENYR 666
Cdd:PLN03200 1784 LEDQPTEemkmVAICALQNLVMHSR--TNKRAVAEAGGVQVVQELLLSSNPDtsgqaaLLIKLLfsnHTIQEYASSELIR 1861
|
250 260
....*....|....*....|....*.
gi 1370457304 667 ---AAIKAE-----RIIENLVKNLNS 684
Cdd:PLN03200 1862 altAALEKDlwstaTVNEEVLRALNV 1887
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
897-1075 |
1.87e-09 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 56.95 E-value: 1.87e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 897 VKASAAWALCpcIKNAKDAgemvrsfvggLELIVNLLKSDNKEVLASVCAAitniakdqenLAVITDHGVVPLLSKLANT 976
Cdd:COG1413 1 VRRAAARALG--RLGDPAA----------VPALIAALADEDPDVRAAAARA----------LGRLGDPRAVPALLEALKD 58
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 977 NNNKLRHHLAEAISRccmwgrnrvaFGEHKAVAPLVRYLKSNDTNVHRATAQALYQLSEDAdncitmhengAVKLLLDMV 1056
Cdd:COG1413 59 PDPEVRAAAAEALGR----------IGDPEAVPALIAALKDEDPEVRRAAAEALGRLGDPA----------AVPALLEAL 118
|
170
....*....|....*....
gi 1370457304 1057 GSPDQDLQEAAAGCISNIR 1075
Cdd:COG1413 119 KDPDWEVRRAAARALGRLG 137
|
|
| SRP1 |
COG5064 |
Karyopherin (importin) alpha [Intracellular trafficking and secretion]; |
657-1085 |
6.05e-07 |
|
Karyopherin (importin) alpha [Intracellular trafficking and secretion];
Pssm-ID: 227396 [Multi-domain] Cd Length: 526 Bit Score: 53.36 E-value: 6.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 657 QECASEENYRAAIKAERIIENLVKNLNSENEQLQeHCAMAIYQCAEDKETR---DLVRLHGGLKPLASLLNNTDNKERLA 733
Cdd:COG5064 55 SEEAESSFIPMEQQFYSELPQLTQQLFSDDIEQQ-LQAVYKFRKLLSKETSppiQPVIDAGVVPRFVEFMDEIQRDMLQF 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 734 AVTGAIWKCSISKENVTKFR-EYKAIETLVGLLTDQPEEVLVNVVGALGECCQEREN-RVIVRKCGGIQPLVNLLV--GI 809
Cdd:COG5064 134 EAAWALTNIASGTTQQTKVVvDAGAVPLFIQLLSSTEDDVREQAVWALGNIAGDSEGcRDYVLQCGALEPLLGLLLssAI 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 810 NQALLVNVTkavgacavepesmmWGLtlssrlkySGMMRGhcslkllgSSDPPNFVFFRSrklrnriidrldGVRLLWSL 889
Cdd:COG5064 214 HISMLRNAT--------------WTL--------SNLCRG--------KNPPPDWSNISQ------------ALPILAKL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 890 LKNPHPDVKASAAWALC-------PCIKNAKDAGEMVRsfvgglelIVNLLKSDNKEVLASVCAAITNIAK-DQENLAVI 961
Cdd:COG5064 252 IYSRDPEVLVDACWAISylsdgpnEKIQAVLDVGIPGR--------LVELLSHESAKIQTPALRSVGNIVTgSDDQTQVI 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 962 TDHGVVPLLSKLANTNNNKLRHHLAEAISRCCMWGRNRV-AFGEHKAVAPLVRYLKSNDTNVHR----ATAQALYQLSED 1036
Cdd:COG5064 324 INCGALKAFRSLLSSPKENIRKEACWTISNITAGNTEQIqAVIDANLIPPLIHLLSSAEYKIKKeacwAISNATSGGLNR 403
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1370457304 1037 ADNCITMHENGAVKLLLDMVGSPDQDLQEAAAGCISNIRRLALATEKAR 1085
Cdd:COG5064 404 PDIIRYLVSQGFIKPLCDLLDVVDNKIIEVALDAIENILKVGEQDRLRY 452
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
885-990 |
2.29e-04 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 41.17 E-value: 2.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 885 LLWSLLKNPHPDVKASAAWALCPCikNAKDAgemvrsfvggLELIVNLLKSDNKEVLASVCAAitniakdqenLAVITDH 964
Cdd:pfam13646 4 LLQALLRDPDPEVRAAAIRALGRI--GDPEA----------VPALLELLKDEDPAVRRAAAEA----------LGKIGDP 61
|
90 100
....*....|....*....|....*..
gi 1370457304 965 GVVPLLSKLANTNNNK-LRHHLAEAIS 990
Cdd:pfam13646 62 EALPALLELLRDDDDDvVRAAAAEALA 88
|
|
| Arm |
pfam00514 |
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
624-661 |
6.55e-04 |
|
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.
Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 38.20 E-value: 6.55e-04
10 20 30
....*....|....*....|....*....|....*...
gi 1370457304 624 NKEAIRKAGGIPLLARLLKTSHENMLIPVVGTLQECAS 661
Cdd:pfam00514 4 NKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLAA 41
|
|
| PLN03200 |
PLN03200 |
cellulose synthase-interactive protein; Provisional |
449-684 |
9.73e-04 |
|
cellulose synthase-interactive protein; Provisional
Pssm-ID: 215629 [Multi-domain] Cd Length: 2102 Bit Score: 43.55 E-value: 9.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 449 SEYWQ---IQKLVKYLKGGNQTATVIALCSMRDFSLAQETCQLAIRDVGGLEVLINLLETDEvkCKIGSLKILKEISHNP 525
Cdd:PLN03200 1644 SEYYFevpVAVLVKLLRSTSESTVVVALNALLVLERDDSSSAEQMAESGAIEALLELLRSHQ--CEEAAARLLEALFNNV 1721
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 526 QIRQ-NIVDLGGLPIMVNILDsPH---KSLKCLAAETIANVAkfkrarrvvrQHGGITKlvalldcAHDSTKP--AQSSL 599
Cdd:PLN03200 1722 KVREmKATKYAIAPLSQYLLD-PQtrsQQARLLAALALGDLF----------QHEGLAR-------STDAVSAcrALVSL 1783
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 600 YEARDVE----VARCGALALWSCSKshTNKEAIRKAGGIPLLARLLKTSHEN------MLIPVV---GTLQECASEENYR 666
Cdd:PLN03200 1784 LEDQPTEemkmVAICALQNLVMHSR--TNKRAVAEAGGVQVVQELLLSSNPDtsgqaaLLIKLLfsnHTIQEYASSELIR 1861
|
250 260
....*....|....*....|....*.
gi 1370457304 667 ---AAIKAE-----RIIENLVKNLNS 684
Cdd:PLN03200 1862 altAALEKDlwstaTVNEEVLRALNV 1887
|
|
| Arm |
pfam00514 |
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
524-563 |
1.95e-03 |
|
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.
Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 37.05 E-value: 1.95e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 1370457304 524 NPQIRQNIVDLGGLPIMVNILDSPHKSLKCLAAETIANVA 563
Cdd:pfam00514 1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
|
|
| ARM |
smart00185 |
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
621-656 |
2.42e-03 |
|
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.
Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 36.64 E-value: 2.42e-03
10 20 30
....*....|....*....|....*....|....*.
gi 1370457304 621 SHTNKEAIRKAGGIPLLARLLKTSHENMLIPVVGTL 656
Cdd:smart00185 1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWAL 36
|
|
| PLN03200 |
PLN03200 |
cellulose synthase-interactive protein; Provisional |
625-823 |
2.70e-03 |
|
cellulose synthase-interactive protein; Provisional
Pssm-ID: 215629 [Multi-domain] Cd Length: 2102 Bit Score: 42.01 E-value: 2.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 625 KEAIRKAGGIPLLARLLKT----SHENMLIpVVGTLqeCASEENYRAAIKAERIIENLVKNLNSENEQLQEHCAMAIYQC 700
Cdd:PLN03200 481 KWAITAAGGIPPLVQLLETgsqkAKEDSAT-VLWNL--CCHSEDIRACVESAGAVPALLWLLKNGGPKGQEIAAKTLTKL 557
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 701 AEDKETRDLVRLhgglkpLASLLNNT-DNKERLAAVTGAIWkCSISKENVtkFRE----YKAIETLVGLLTDQPEEVLVN 775
Cdd:PLN03200 558 VRTADAATISQL------TALLLGDLpESKVHVLDVLGHVL-SVASLEDL--VREgsaaNDALRTLIQLLSSSKEETQEK 628
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1370457304 776 VVGALGECCQERENrvivrKCGG------IQPLVNLLVGINQALLVNVTKAVGA 823
Cdd:PLN03200 629 AASVLADIFSSRQD-----LCESlatdeiINPCIKLLTNNTEAVATQSARALAA 677
|
|
| ARM |
smart00185 |
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
924-953 |
8.38e-03 |
|
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.
Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 35.10 E-value: 8.38e-03
10 20 30
....*....|....*....|....*....|
gi 1370457304 924 GGLELIVNLLKSDNKEVLASVCAAITNIAK 953
Cdd:smart00185 12 GGLPALVELLKSEDEEVVKEAAWALSNLSS 41
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
897-1075 |
1.87e-09 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 56.95 E-value: 1.87e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 897 VKASAAWALCpcIKNAKDAgemvrsfvggLELIVNLLKSDNKEVLASVCAAitniakdqenLAVITDHGVVPLLSKLANT 976
Cdd:COG1413 1 VRRAAARALG--RLGDPAA----------VPALIAALADEDPDVRAAAARA----------LGRLGDPRAVPALLEALKD 58
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 977 NNNKLRHHLAEAISRccmwgrnrvaFGEHKAVAPLVRYLKSNDTNVHRATAQALYQLSEDAdncitmhengAVKLLLDMV 1056
Cdd:COG1413 59 PDPEVRAAAAEALGR----------IGDPEAVPALIAALKDEDPEVRRAAAEALGRLGDPA----------AVPALLEAL 118
|
170
....*....|....*....
gi 1370457304 1057 GSPDQDLQEAAAGCISNIR 1075
Cdd:COG1413 119 KDPDWEVRRAAARALGRLG 137
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
883-1033 |
1.03e-07 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 51.94 E-value: 1.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 883 VRLLWSLLKNPHPDVKASAAWALcpciknakdaGEMVRSfvGGLELIVNLLKSDNKEVLASVCAAITNIAKDQenlavit 962
Cdd:COG1413 18 VPALIAALADEDPDVRAAAARAL----------GRLGDP--RAVPALLEALKDPDPEVRAAAAEALGRIGDPE------- 78
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1370457304 963 dhgVVPLLSKLANTNNNKLRHHLAEAISRccmwgrnrvaFGEHKAVAPLVRYLKSNDTNVHRATAQALYQL 1033
Cdd:COG1413 79 ---AVPALIAALKDEDPEVRRAAAEALGR----------LGDPAAVPALLEALKDPDWEVRRAAARALGRL 136
|
|
| SRP1 |
COG5064 |
Karyopherin (importin) alpha [Intracellular trafficking and secretion]; |
657-1085 |
6.05e-07 |
|
Karyopherin (importin) alpha [Intracellular trafficking and secretion];
Pssm-ID: 227396 [Multi-domain] Cd Length: 526 Bit Score: 53.36 E-value: 6.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 657 QECASEENYRAAIKAERIIENLVKNLNSENEQLQeHCAMAIYQCAEDKETR---DLVRLHGGLKPLASLLNNTDNKERLA 733
Cdd:COG5064 55 SEEAESSFIPMEQQFYSELPQLTQQLFSDDIEQQ-LQAVYKFRKLLSKETSppiQPVIDAGVVPRFVEFMDEIQRDMLQF 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 734 AVTGAIWKCSISKENVTKFR-EYKAIETLVGLLTDQPEEVLVNVVGALGECCQEREN-RVIVRKCGGIQPLVNLLV--GI 809
Cdd:COG5064 134 EAAWALTNIASGTTQQTKVVvDAGAVPLFIQLLSSTEDDVREQAVWALGNIAGDSEGcRDYVLQCGALEPLLGLLLssAI 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 810 NQALLVNVTkavgacavepesmmWGLtlssrlkySGMMRGhcslkllgSSDPPNFVFFRSrklrnriidrldGVRLLWSL 889
Cdd:COG5064 214 HISMLRNAT--------------WTL--------SNLCRG--------KNPPPDWSNISQ------------ALPILAKL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 890 LKNPHPDVKASAAWALC-------PCIKNAKDAGEMVRsfvgglelIVNLLKSDNKEVLASVCAAITNIAK-DQENLAVI 961
Cdd:COG5064 252 IYSRDPEVLVDACWAISylsdgpnEKIQAVLDVGIPGR--------LVELLSHESAKIQTPALRSVGNIVTgSDDQTQVI 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 962 TDHGVVPLLSKLANTNNNKLRHHLAEAISRCCMWGRNRV-AFGEHKAVAPLVRYLKSNDTNVHR----ATAQALYQLSED 1036
Cdd:COG5064 324 INCGALKAFRSLLSSPKENIRKEACWTISNITAGNTEQIqAVIDANLIPPLIHLLSSAEYKIKKeacwAISNATSGGLNR 403
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1370457304 1037 ADNCITMHENGAVKLLLDMVGSPDQDLQEAAAGCISNIRRLALATEKAR 1085
Cdd:COG5064 404 PDIIRYLVSQGFIKPLCDLLDVVDNKIIEVALDAIENILKVGEQDRLRY 452
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
627-782 |
6.82e-06 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 46.93 E-value: 6.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 627 AIRKAGGIPLLARLLKTSHENMLIPVVGTLqecaseenyrAAIKAERIIENLVKNLNSENEQLQEHCAMAIYQCAEDKet 706
Cdd:COG1413 11 RLGDPAAVPALIAALADEDPDVRAAAARAL----------GRLGDPRAVPALLEALKDPDPEVRAAAAEALGRIGDPE-- 78
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1370457304 707 rdlvrlhgGLKPLASLLNNTDNKERLAAVTGaiwkcsiskenVTKFREYKAIETLVGLLTDQPEEVLVNVVGALGE 782
Cdd:COG1413 79 --------AVPALIAALKDEDPEVRRAAAEA-----------LGRLGDPAAVPALLEALKDPDWEVRRAAARALGR 135
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
885-990 |
2.29e-04 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 41.17 E-value: 2.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 885 LLWSLLKNPHPDVKASAAWALCPCikNAKDAgemvrsfvggLELIVNLLKSDNKEVLASVCAAitniakdqenLAVITDH 964
Cdd:pfam13646 4 LLQALLRDPDPEVRAAAIRALGRI--GDPEA----------VPALLELLKDEDPAVRRAAAEA----------LGKIGDP 61
|
90 100
....*....|....*....|....*..
gi 1370457304 965 GVVPLLSKLANTNNNK-LRHHLAEAIS 990
Cdd:pfam13646 62 EALPALLELLRDDDDDvVRAAAAEALA 88
|
|
| Arm |
pfam00514 |
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
624-661 |
6.55e-04 |
|
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.
Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 38.20 E-value: 6.55e-04
10 20 30
....*....|....*....|....*....|....*...
gi 1370457304 624 NKEAIRKAGGIPLLARLLKTSHENMLIPVVGTLQECAS 661
Cdd:pfam00514 4 NKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLAA 41
|
|
| PLN03200 |
PLN03200 |
cellulose synthase-interactive protein; Provisional |
449-684 |
9.73e-04 |
|
cellulose synthase-interactive protein; Provisional
Pssm-ID: 215629 [Multi-domain] Cd Length: 2102 Bit Score: 43.55 E-value: 9.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 449 SEYWQ---IQKLVKYLKGGNQTATVIALCSMRDFSLAQETCQLAIRDVGGLEVLINLLETDEvkCKIGSLKILKEISHNP 525
Cdd:PLN03200 1644 SEYYFevpVAVLVKLLRSTSESTVVVALNALLVLERDDSSSAEQMAESGAIEALLELLRSHQ--CEEAAARLLEALFNNV 1721
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 526 QIRQ-NIVDLGGLPIMVNILDsPH---KSLKCLAAETIANVAkfkrarrvvrQHGGITKlvalldcAHDSTKP--AQSSL 599
Cdd:PLN03200 1722 KVREmKATKYAIAPLSQYLLD-PQtrsQQARLLAALALGDLF----------QHEGLAR-------STDAVSAcrALVSL 1783
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 600 YEARDVE----VARCGALALWSCSKshTNKEAIRKAGGIPLLARLLKTSHEN------MLIPVV---GTLQECASEENYR 666
Cdd:PLN03200 1784 LEDQPTEemkmVAICALQNLVMHSR--TNKRAVAEAGGVQVVQELLLSSNPDtsgqaaLLIKLLfsnHTIQEYASSELIR 1861
|
250 260
....*....|....*....|....*.
gi 1370457304 667 ---AAIKAE-----RIIENLVKNLNS 684
Cdd:PLN03200 1862 altAALEKDlwstaTVNEEVLRALNV 1887
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
966-1068 |
1.03e-03 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 39.24 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 966 VVPLLSKLANTNNNKLRHHLAEAISRccmwgrnrvaFGEHKAVAPLVRYLKSNDTNVHRATAQALYQLSEDAdncitmhe 1045
Cdd:pfam13646 1 LPALLQALLRDPDPEVRAAAIRALGR----------IGDPEAVPALLELLKDEDPAVRRAAAEALGKIGDPE-------- 62
|
90 100
....*....|....*....|....
gi 1370457304 1046 ngAVKLLLDMVGS-PDQDLQEAAA 1068
Cdd:pfam13646 63 --ALPALLELLRDdDDDVVRAAAA 84
|
|
| Arm |
pfam00514 |
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
1045-1074 |
1.09e-03 |
|
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.
Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 37.82 E-value: 1.09e-03
10 20 30
....*....|....*....|....*....|
gi 1370457304 1045 ENGAVKLLLDMVGSPDQDLQEAAAGCISNI 1074
Cdd:pfam00514 10 EAGAVPPLVRLLSSPDEEVQEEAAWALSNL 39
|
|
| Arm |
pfam00514 |
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
524-563 |
1.95e-03 |
|
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.
Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 37.05 E-value: 1.95e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 1370457304 524 NPQIRQNIVDLGGLPIMVNILDSPHKSLKCLAAETIANVA 563
Cdd:pfam00514 1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
|
|
| ARM |
smart00185 |
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
621-656 |
2.42e-03 |
|
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.
Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 36.64 E-value: 2.42e-03
10 20 30
....*....|....*....|....*....|....*.
gi 1370457304 621 SHTNKEAIRKAGGIPLLARLLKTSHENMLIPVVGTL 656
Cdd:smart00185 1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWAL 36
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
928-1030 |
2.51e-03 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 38.09 E-value: 2.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 928 LIVNLLKSDNKEVLASVCAAITNIaKDQEnlavitdhgVVPLLSKLANTNNNKLRHHLAEAISRccmwgrnrvaFGEHKA 1007
Cdd:pfam13646 4 LLQALLRDPDPEVRAAAIRALGRI-GDPE---------AVPALLELLKDEDPAVRRAAAEALGK----------IGDPEA 63
|
90 100
....*....|....*....|....
gi 1370457304 1008 VAPLVRYLKS-NDTNVHRATAQAL 1030
Cdd:pfam13646 64 LPALLELLRDdDDDVVRAAAAEAL 87
|
|
| PLN03200 |
PLN03200 |
cellulose synthase-interactive protein; Provisional |
625-823 |
2.70e-03 |
|
cellulose synthase-interactive protein; Provisional
Pssm-ID: 215629 [Multi-domain] Cd Length: 2102 Bit Score: 42.01 E-value: 2.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 625 KEAIRKAGGIPLLARLLKT----SHENMLIpVVGTLqeCASEENYRAAIKAERIIENLVKNLNSENEQLQEHCAMAIYQC 700
Cdd:PLN03200 481 KWAITAAGGIPPLVQLLETgsqkAKEDSAT-VLWNL--CCHSEDIRACVESAGAVPALLWLLKNGGPKGQEIAAKTLTKL 557
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 701 AEDKETRDLVRLhgglkpLASLLNNT-DNKERLAAVTGAIWkCSISKENVtkFRE----YKAIETLVGLLTDQPEEVLVN 775
Cdd:PLN03200 558 VRTADAATISQL------TALLLGDLpESKVHVLDVLGHVL-SVASLEDL--VREgsaaNDALRTLIQLLSSSKEETQEK 628
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1370457304 776 VVGALGECCQERENrvivrKCGG------IQPLVNLLVGINQALLVNVTKAVGA 823
Cdd:PLN03200 629 AASVLADIFSSRQD-----LCESlatdeiINPCIKLLTNNTEAVATQSARALAA 677
|
|
| ARM |
smart00185 |
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
924-953 |
8.38e-03 |
|
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.
Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 35.10 E-value: 8.38e-03
10 20 30
....*....|....*....|....*....|
gi 1370457304 924 GGLELIVNLLKSDNKEVLASVCAAITNIAK 953
Cdd:smart00185 12 GGLPALVELLKSEDEEVVKEAAWALSNLSS 41
|
|
| SRP1 |
COG5064 |
Karyopherin (importin) alpha [Intracellular trafficking and secretion]; |
875-1086 |
9.30e-03 |
|
Karyopherin (importin) alpha [Intracellular trafficking and secretion];
Pssm-ID: 227396 [Multi-domain] Cd Length: 526 Bit Score: 39.87 E-value: 9.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 875 RIIDRLDGVRLLWSLLKNPHPDVKASAAWALcpciKNAKDAGEMVRSFV---GGLELIVNLLKSDNKEV---------LA 942
Cdd:COG5064 151 KVVVDAGAVPLFIQLLSSTEDDVREQAVWAL----GNIAGDSEGCRDYVlqcGALEPLLGLLLSSAIHIsmlrnatwtLS 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370457304 943 SVCAAiTNIAKDQENLAVitdhgVVPLLSKLANTNNnklrhhlAEAISRCCmWGRNRVAFGEHKAVAP---------LVR 1013
Cdd:COG5064 227 NLCRG-KNPPPDWSNISQ-----ALPILAKLIYSRD-------PEVLVDAC-WAISYLSDGPNEKIQAvldvgipgrLVE 292
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1370457304 1014 YLKSNDTNVHRATAQALYQLSEDADNCITMHEN-GAVKLLLDMVGSPDQDLQEAAAGCISNIRrlALATEKARY 1086
Cdd:COG5064 293 LLSHESAKIQTPALRSVGNIVTGSDDQTQVIINcGALKAFRSLLSSPKENIRKEACWTISNIT--AGNTEQIQA 364
|
|
| |
