|
Name |
Accession |
Description |
Interval |
E-value |
| Cadherin_repeat |
cd11304 |
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
274-343 |
4.98e-10 |
|
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers.
Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 56.94 E-value: 4.98e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1370459652 274 IYAEDGDRGINQPIIYSIFRGNVNGTFIIHPDSGNLTVARSVP--SPMTFLLLVKGQ-QADLARYSVTQVTVE 343
Cdd:cd11304 19 VSATDPDSGENGEVTYSIVSGNEDGLFSIDPSTGEITTAKPLDreEQSSYTLTVTATdGGGPPLSSTATVTIT 91
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
452-665 |
1.06e-09 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 62.26 E-value: 1.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 452 SEQEPPSTDVPPS----PEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENs 527
Cdd:PHA03247 2669 RLGRAAQASSPPQrprrRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAG- 2747
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 528 tshqPATPGGDTAQTPKPGTSQPMPPG--VGTSTSHQPATPSGGTAQTPEPGTSQPMPPSmgtSTSHQPATPGGGTAQTP 605
Cdd:PHA03247 2748 ----PATPGGPARPARPPTTAGPPAPAppAAPAAGPPRRLTRPAVASLSESRESLPSPWD---PADPPAAVLAPAAALPP 2820
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 606 EAGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKSTPSSGQRPDVGSSESH 665
Cdd:PHA03247 2821 AASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPAR 2880
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
451-653 |
1.09e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 58.80 E-value: 1.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 451 VSEQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENSTSH 530
Cdd:PHA03247 2602 VDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQ 2681
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 531 QPATPG--------GDTAQTPKPGTS-QPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPggGT 601
Cdd:PHA03247 2682 RPRRRAarptvgslTSLADPPPPPPTpEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARP--AR 2759
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1370459652 602 AQTPeAGTSQPMPPGmGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKSTPSS 653
Cdd:PHA03247 2760 PPTT-AGPPAPAPPA-APAAGPPRRLTRPAVASLSESRESLPSPWDPADPPA 2809
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
447-660 |
1.83e-08 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 57.77 E-value: 1.83e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 447 IEIQVSEQEPPSTDVPPSPEAGGTTGPWT--STTSEVP----RPPEPSQGPSTTSSGGGTGPHP--PSGTTLRPPTSSTP 518
Cdd:PHA03378 572 LQIQPLTSPTTSQLASSAPSYAQTPWPVPhpSQTPEPPttqsHIPETSAPRQWPMPLRPIPMRPlrMQPITFNVLVFPTP 651
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 519 GGPPGAEnstshqpATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATpsgGTAQTPePGTSQPMPPSMGTSTSHQPATPG 598
Cdd:PHA03378 652 HQPPQVE-------ITPYKPTWTQIGHIPYQPSPTGANTMLPIQWAP---GTMQPP-PRAPTPMRPPAAPPGRAQRPAAA 720
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1370459652 599 GGTAQTPEA---------GTSQPMPPGMGTSTSHQPTTPGGGTAQTPE--PGTSQPMPLSKSTPSSGQRPDVG 660
Cdd:PHA03378 721 TGRARPPAAapgrarppaAAPGRARPPAAAPGRARPPAAAPGRARPPAaaPGAPTPQPPPQAPPAPQQRPRGA 793
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
457-658 |
3.30e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 57.26 E-value: 3.30e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 457 PSTDVPPSPEAGGTTGPWTSTTSEVPRPPEpsqgPSTTSSGGGTGPHPPsgTTLRPPTSSTPGGPPGAENSTSHQPATPG 536
Cdd:PHA03247 2717 SATPLPPGPAAARQASPALPAAPAPPAVPA----GPATPGGPARPARPP--TTAGPPAPAPPAAPAAGPPRRLTRPAVAS 2790
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 537 GDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQT-PEPGTSQPMPPSMGTSTSHQPATPGGGTAqtPEAGTSQPMPP 615
Cdd:PHA03247 2791 LSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPlPPPTSAQPTAPPPPPGPPPPSLPLGGSVA--PGGDVRRRPPS 2868
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1370459652 616 GmgtSTSHQPTTPgggtAQTPEPGTSQPmPLSKSTPSSGQRPD 658
Cdd:PHA03247 2869 R---SPAAKPAAP----ARPPVRRLARP-AVSRSTESFALPPD 2903
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
311-643 |
1.03e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 55.38 E-value: 1.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 311 VARSVPSPMTFLLLVKGQQADLARYSVTQVTVEAVAAAGSPPRFPQRLyrgTVARGAGAGVVVKDAAAPSQPLRIQAQDP 390
Cdd:PRK07764 438 APAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPP---AAPAPAAAPAAPAAPAAPAGADDAATLRE 514
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 391 EFSDLNSAITyritNHSHFRME-------------GEVVLTTTTLAQAGAFYAEVEAHNTVTSGTATTVIEIQVSEQEPP 457
Cdd:PRK07764 515 RWPEILAAVP----KRSRKTWAillpeatvlgvrgDTLVLGFSTGGLARRFASPGNAEVLVTALAEELGGDWQVEAVVGP 590
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 458 StdvPPSPEAGGTTGPWTST-TSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENSTSHQPATPG 536
Cdd:PRK07764 591 A---PGAAGGEGPPAPASSGpPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGD 667
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 537 GDTAQTPKPGTSQPMPPGVGTstshQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTAQTPEAGTSQPMPP- 615
Cdd:PRK07764 668 GWPAKAGGAAPAAPPPAPAPA----APAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPp 743
|
330 340 350
....*....|....*....|....*....|....*.
gi 1370459652 616 --------GMGTSTSHQPTTPGGGTAQTPEPGTSQP 643
Cdd:PRK07764 744 epddppdpAGAPAQPPPPPAPAPAAAPAAAPPPSPP 779
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
457-664 |
1.79e-07 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 54.69 E-value: 1.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 457 PSTDVPPSPEAGGTTGPWTSTtsevprPPEPSQGPSTTSSGGGTGPHPPsGTTLRPPTSSTPGGPPGA--------ENST 528
Cdd:PHA03378 649 PTPHQPPQVEITPYKPTWTQI------GHIPYQPSPTGANTMLPIQWAP-GTMQPPPRAPTPMRPPAAppgraqrpAAAT 721
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 529 SHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPE--PGTSQPMPPSMGTSTSHQPATPGGGTAQTPE 606
Cdd:PHA03378 722 GRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAaaPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQ 801
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1370459652 607 AG-----TSQPMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKSTPsSGQRPDVGSSES 664
Cdd:PHA03378 802 AGptsmqLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSLKKPAALERQAA-AGPTPSPGSGTS 863
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
442-662 |
2.43e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 54.56 E-value: 2.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 442 TATTVIEIQVSEQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPsqgPSTTSSGGGTGPHP-PSGTTLRPPTSSTPGG 520
Cdd:PHA03247 2784 TRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLP---PPTSAQPTAPPPPPgPPPPSLPLGGSVAPGG 2860
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 521 PPGAENSTSHQPATPGGDT---------AQTPKPGTSQPMPPgVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTS 591
Cdd:PHA03247 2861 DVRRRPPSRSPAAKPAAPArppvrrlarPAVSRSTESFALPP-DQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRP 2939
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1370459652 592 HQPATPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTpgggTAQTPEPGTSQPMPLSkSTPSSGQRPDVGSS 662
Cdd:PHA03247 2940 QPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVP----RFRVPQPAPSREAPAS-STPPLTGHSLSRVS 3005
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
456-657 |
4.23e-07 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 53.38 E-value: 4.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 456 PPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEpSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENSTSHQP--- 532
Cdd:pfam05109 593 PTVGETSPQANTTNHTLGGTSSTPVVTSPPK-NATSAVTTGQHNITSSSTSSMSLRPSSISETLSPSTSDNSTSHMPllt 671
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 533 -ATPGG------------------DTAQTPKPGT-SQPMPPGvGTSTSHQPATPSGgTAQTPEPGTSQPMPPSmGTSTSH 592
Cdd:pfam05109 672 sAHPTGgenitqvtpaststhhvsTSSPAPRPGTtSQASGPG-NSSTSTKPGEVNV-TKGTPPKNATSPQAPS-GQKTAV 748
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1370459652 593 QPATPGGGTAQTPEAGTSQPmppGMGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKSTpSSGQRP 657
Cdd:pfam05109 749 PTVTSTGGKANSTTGGKHTT---GHGARTSTEPTTDYGGDSTTPRTRYNATTYLPPST-SSKLRP 809
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
456-657 |
4.29e-07 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 53.62 E-value: 4.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 456 PPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGT---------GPHPPSGTTLRPPTSSTPGGPPGAEN 526
Cdd:pfam03154 182 SPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAphtliqqtpTLHPQRLPSPHPPLQPMTQPPPPSQV 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 527 STS-------HQPATPGGDTAQTPKPGTSQPMPPgvgtstshQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPatPGG 599
Cdd:pfam03154 262 SPQplpqpslHGQMPPMPHSLQTGPSHMQHPVPP--------QPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTP--PSQ 331
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1370459652 600 GTAQTPEAGTSQPMPPGmGTSTSHQPTTPGGGTAQTPEPgTSQPMPLSKSTPSSGQRP 657
Cdd:pfam03154 332 SQLQSQQPPREQPLPPA-PLSMPHIKPPPTTPIPQLPNP-QSHKHPPHLSGPSPFQMN 387
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
456-657 |
4.59e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.40 E-value: 4.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 456 PPSTD--VPPSPEAGGTTGPwtSTTSEVPRPPEPSQGPSTTSSGGGTGPHP-PSGTTLRPPTSSTPGGPPGAENSTSHQP 532
Cdd:PHA03247 2561 PAAPDrsVPPPRPAPRPSEP--AVTSRARRPDAPPQSARPRAPVDDRGDPRgPAPPSPLPPDTHAPDPPPPSPSPAANEP 2638
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 533 ATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTS-HQPATPGGGTAQTPEAGTSQ 611
Cdd:PHA03247 2639 DPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSlADPPPPPPTPEPAPHALVSA 2718
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1370459652 612 -PMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQPM----PLSKSTPSSGQRP 657
Cdd:PHA03247 2719 tPLPPGPAAARQASPALPAAPAPPAVPAGPATPGgparPARPPTTAGPPAP 2769
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
417-645 |
1.11e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 52.25 E-value: 1.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 417 LTTTTLAQAGAFYAEVEAHNTVTSGTATTVIEIQVSEQEPPSTDVPPSPEAggTTGPWTSTTSEVPRPPEPSQGPSTTSS 496
Cdd:PHA03247 2721 LPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAP--PAAPAAGPPRRLTRPAVASLSESRESL 2798
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 497 GGGTGPHPPSGTTLRPPTSSTPGGPPGAenstshqPATPGGDTAQTPKPGTSQPMPP-----------------GVGTST 559
Cdd:PHA03247 2799 PSPWDPADPPAAVLAPAAALPPAASPAG-------PLPPPTSAQPTAPPPPPGPPPPslplggsvapggdvrrrPPSRSP 2871
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 560 SHQPATPSGGTA------QTPEPGTSQPMPPSmGTSTSHQPATPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTA 633
Cdd:PHA03247 2872 AAKPAAPARPPVrrlarpAVSRSTESFALPPD-QPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPA 2950
|
250
....*....|..
gi 1370459652 634 QTPEPGTSQPMP 645
Cdd:PHA03247 2951 GAGEPSGAVPQP 2962
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
456-652 |
1.25e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 52.25 E-value: 1.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 456 PPSTDVP------PSPEAGGTTGPWTSTTSEVPRP---PEPSQGPSTTSSGGGTGPHPPSGTTLR--------------- 511
Cdd:PHA03247 2618 PPDTHAPdppppsPSPAANEPDPHPPPTVPPPERPrddPAPGRVSRPRRARRLGRAAQASSPPQRprrraarptvgslts 2697
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 512 ----PPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPgTSQPMPPGVGTStshqPATPSGGTAQTPEPGTSQPMPPS-- 585
Cdd:PHA03247 2698 ladpPPPPPTPEPAPHALVSATPLPPGPAAARQASPAL-PAAPAPPAVPAG----PATPGGPARPARPPTTAGPPAPApp 2772
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1370459652 586 MGTSTSHQPATPGGGTAQTPEAGTSQPMPPGMGTSTS----HQPTTPGGGTAQTPEPGTSQPMPLSKSTPS 652
Cdd:PHA03247 2773 AAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAavlaPAAALPPAASPAGPLPPPTSAQPTAPPPPP 2843
|
|
| CA |
smart00112 |
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
276-314 |
2.25e-06 |
|
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium.
Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 45.80 E-value: 2.25e-06
10 20 30
....*....|....*....|....*....|....*....
gi 1370459652 276 AEDGDRGINQPIIYSIFRGNVNGTFIIHPDSGNLTVARS 314
Cdd:smart00112 2 ATDADSGENGKVTYSILSGNDDGLFSIDPETGEITTTKP 40
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
503-645 |
2.85e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 50.75 E-value: 2.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 503 HPPSGTTLRPPTSSTPGGPPGAENSTshQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQ--PATPSGGTAQTPEPGTSQ 580
Cdd:PRK07764 600 PPAPASSGPPEEAARPAAPAAPAAPA--APAPAGAAAAPAEASAAPAPGVAAPEHHPKHVavPDASDGGDGWPAKAGGAA 677
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1370459652 581 PMPPSMGTSTSHQPATPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQPMP 645
Cdd:PRK07764 678 PAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLP 742
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
437-664 |
3.32e-06 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 50.69 E-value: 3.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 437 TVTSGTATTVIEIQVSEQEPPSTDVPPSPEAGGTTGPWTST----TSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTlRP 512
Cdd:pfam05109 406 TRTATNATTTTHKVIFSKAPESTTTSPTLNTTGFAAPNTTTglpsSTHVPTNLTAPASTGPTVSTADVTSPTPAGTT-SG 484
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 513 PTSSTPGGPPGAENSTSHQP--------ATPGGDTAQTPKPGTSQPMP----PGVGTSTSHQPATPSGGTAQTPEPGTSQ 580
Cdd:pfam05109 485 ASPVTPSPSPRDNGTESKAPdmtsptsaVTTPTPNATSPTPAVTTPTPnatsPTLGKTSPTSAVTTPTPNATSPTPAVTT 564
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 581 PMP----PSMGTSTSHQPATPGGGTAQTPEAGTSQPmppgMGTSTSHQPttpgGGTAQTPEpgTSQPMPLSKSTPSSGQR 656
Cdd:pfam05109 565 PTPnatiPTLGKTSPTSAVTTPTPNATSPTVGETSP----QANTTNHTL----GGTSSTPV--VTSPPKNATSAVTTGQH 634
|
....*...
gi 1370459652 657 PDVGSSES 664
Cdd:pfam05109 635 NITSSSTS 642
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
480-657 |
3.54e-06 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 50.54 E-value: 3.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 480 EVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSt 559
Cdd:pfam03154 175 QAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTLHPQRLPSPHPPLQPMT- 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 560 shQPATPSGGTAQ-TPEPGTSQPMPPsmgtstshQPATPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPgggtaQTPEP 638
Cdd:pfam03154 254 --QPPPPSQVSPQpLPQPSLHGQMPP--------MPHSLQTGPSHMQHPVPPQPFPLTPQSSQSQVPPGP-----SPAAP 318
|
170 180
....*....|....*....|..
gi 1370459652 639 GTSQPM---PLSKSTPSSGQRP 657
Cdd:pfam03154 319 GQSQQRihtPPSQSQLQSQQPP 340
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
416-623 |
3.58e-06 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 50.14 E-value: 3.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 416 VLTTTTLAQAGAFYAEVEAHNTVTSGTATTVIEIQVSEQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTS 495
Cdd:COG3469 16 SATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAAAATSTSAT 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 496 SGGGTGPHPPSGTTLRPPTSSTPGGPPGaeNSTSHQPATPGGDTAQTPKPGTSqpmppGVGTSTSHQPATPSGGTAQTPE 575
Cdd:COG3469 96 LVATSTASGANTGTSTVTTTSTGAGSVT--STTSSTAGSTTTSGASATSSAGS-----TTTTTTVSGTETATGGTTTTST 168
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1370459652 576 PGTSQPMPPSMGTSTSHQPATPGGGTAqTPEAGTSQPMPPGMGTSTSH 623
Cdd:COG3469 169 TTTTTSASTTPSATTTATATTASGATT-PSATTTATTTGPPTPGLPKH 215
|
|
| Cadherin_repeat |
cd11304 |
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
37-120 |
3.90e-06 |
|
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers.
Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 45.77 E-value: 3.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 37 FEVEENTNVTEPLVDIHV-----PEGQEVT--LGALSTPFAFRIQGN--QLFLNVTPDYEEKSLLEAQLLCQSGGT--LV 105
Cdd:cd11304 4 VSVPENAPPGTVVLTVSAtdpdsGENGEVTysIVSGNEDGLFSIDPStgEITTAKPLDREEQSSYTLTVTATDGGGppLS 83
|
90
....*....|....*
gi 1370459652 106 TQLRVFVSVLDVNDN 120
Cdd:cd11304 84 STATVTITVLDVNDN 98
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
452-673 |
4.27e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 50.17 E-value: 4.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 452 SEQEPPSTDVPPSPE-AGGTTGPWTSTTSEV-PRPPEPSQGPSttssgggtgphPPSGTTLRPPTSSTPGGPPGAENSTS 529
Cdd:PHA03307 67 PPTGPPPGPGTEAPAnESRSTPTWSLSTLAPaSPAREGSPTPP-----------GPSSPDPPPPTPPPASPPPSPAPDLS 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 530 HQPATPGGDT---AQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQT-PEPGTSQPMPPSMGTSTSHQPATPGGGTAQTP 605
Cdd:PHA03307 136 EMLRPVGSPGpppAASPPAAGASPAAVASDAASSRQAALPLSSPEETaRAPSSPPAEPPPSTPPAAASPRPPRRSSPISA 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 606 EAGTSQPMPPG----------MGTSTSHQPTTPGGGTAQTPEPGTS---QPMPLSKSTPSSGQRPDVGSSESHDSHGCRS 672
Cdd:PHA03307 216 SASSPAPAPGRsaaddagassSDSSSSESSGCGWGPENECPLPRPApitLPTRIWEASGWNGPSSRPGPASSSSSPRERS 295
|
.
gi 1370459652 673 P 673
Cdd:PHA03307 296 P 296
|
|
| Cadherin |
pfam00028 |
Cadherin domain; |
253-343 |
7.80e-06 |
|
Cadherin domain;
Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 44.60 E-value: 7.80e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 253 YHGAVPTGhILPSPLVLRpgpIYAEDGDRGINQPIIYSIFRGNVNGTFIIHPDSGNLTVARSV--PSPMTFLLLVKGQQA 330
Cdd:pfam00028 1 YSASVPEN-APVGTEVLT---VTATDPDLGPNGRIFYSILGGGPGGNFRIDPDTGDISTTKPLdrESIGEYELTVEATDS 76
|
90
....*....|....
gi 1370459652 331 DL-ARYSVTQVTVE 343
Cdd:pfam00028 77 GGpPLSSTATVTIT 90
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
448-667 |
1.13e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 49.01 E-value: 1.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 448 EIQVSEQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENS 527
Cdd:PHA03307 84 SRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVA 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 528 TSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEP-----GTSQPMPPSMGTSTSHQPATPGGGTA 602
Cdd:PHA03307 164 SDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPisasaSSPAPAPGRSAADDAGASSSDSSSSE 243
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1370459652 603 QTPEAGTSQPMPPGMGTSTSHQPTTPggGTAQTPEPGTSQPMPLSKSTPSSGQRPDVGSSESHDS 667
Cdd:PHA03307 244 SSGCGWGPENECPLPRPAPITLPTRI--WEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSG 306
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
504-619 |
1.50e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.44 E-value: 1.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 504 PPSGTTLRPPTSSTPGGPPGAENSTSHQPATPggDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMP 583
Cdd:PRK07764 398 APSAAAAAPAAAPAPAAAAPAAAAAPAPAAAP--QPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPE 475
|
90 100 110
....*....|....*....|....*....|....*.
gi 1370459652 584 PSMGTSTSHQPATPGGGTAQTPEAGTSQPMPPGMGT 619
Cdd:PRK07764 476 PTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAAT 511
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
441-663 |
1.92e-05 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 48.15 E-value: 1.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 441 GTATTVIEIQVSEQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEpSQGPSTTSSGGGTGPHPPSGTtlRPPTSSTPGG 520
Cdd:PTZ00449 547 GKPGETKEGEVGKKPGPAKEHKPSKIPTLSKKPEFPKDPKHPKDPE-EPKKPKRPRSAQRPTRPKSPK--LPELLDIPKS 623
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 521 PPGAENSTS-------HQPATP----GGDTAQTPKPGTSqPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTS 589
Cdd:PTZ00449 624 PKRPESPKSpkrppppQRPSSPerpeGPKIIKSPKPPKS-PKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESI 702
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1370459652 590 TSHQPATPGGGTAQTPeagtsQPMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKS-----TPSSGQRPDVGSSE 663
Cdd:PTZ00449 703 LKETLPETPGTPFTTP-----RPLPPKLPRDEEFPFEPIGDPDAEQPDDIEFFTPPEEERtffheTPADTPLPDILAEE 776
|
|
| PRK14959 |
PRK14959 |
DNA polymerase III subunits gamma and tau; Provisional |
510-630 |
2.21e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184923 [Multi-domain] Cd Length: 624 Bit Score: 47.75 E-value: 2.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 510 LRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPM---PPGVGTSTSHQPATPSGGTAQTPEP--GTSQPMPP 584
Cdd:PRK14959 365 LMPVESLRPSGGGASAPSGSAAEGPASGGAATIPTPGTQGPQgtaPAAGMTPSSAAPATPAPSAAPSPRVpwDDAPPAPP 444
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1370459652 585 SMGTSTSHQPATPGGGTAQTPEAGTSQP--MPPGMGTSTSHQPTTPGG 630
Cdd:PRK14959 445 RSGIPPRPAPRMPEASPVPGAPDSVASAsdAPPTLGDPSDTAEHTPSG 492
|
|
| CA |
smart00112 |
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
71-122 |
2.47e-05 |
|
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium.
Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 43.11 E-value: 2.47e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1370459652 71 FRI--QGNQLFLNVTPDYEEKSLLEAQLLCQSGGT--LVTQLRVFVSVLDVNDNAP 122
Cdd:smart00112 26 FSIdpETGEITTTKPLDREEQPEYTLTVEATDGGGppLSSTATVTITVLDVNDNAP 81
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
475-654 |
2.48e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.01 E-value: 2.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 475 TSTTSEVPRPPEPSQ-------GPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGP--PGAENSTSHQPATPggdTAQTPKP 545
Cdd:PHA03247 2667 ARRLGRAAQASSPPQrprrraaRPTVGSLTSLADPPPPPPTPEPAPHALVSATPlpPGPAAARQASPALP---AAPAPPA 2743
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 546 GTSQPMPPGvGTSTSHQPATPSGGTAQTPEPGTSQPmPPSMGTSTSHQPATPGGGTAQTPEAGTSQPMPPGMGTSTSHQP 625
Cdd:PHA03247 2744 VPAGPATPG-GPARPARPPTTAGPPAPAPPAAPAAG-PPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPA 2821
|
170 180 190
....*....|....*....|....*....|...
gi 1370459652 626 TTPGGG----TAQTPEPGTSQPMPLSKSTPSSG 654
Cdd:PHA03247 2822 ASPAGPlpppTSAQPTAPPPPPGPPPPSLPLGG 2854
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
508-651 |
4.18e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 46.90 E-value: 4.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 508 TTLRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPAtpsggtaQTPEPGTSQPMPPSMG 587
Cdd:PRK07764 376 ARLERLERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPA-------PAPAPAPAPPSPAGNA 448
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1370459652 588 TSTSHQPATPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKSTP 651
Cdd:PRK07764 449 PAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATL 512
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
517-669 |
4.22e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 46.90 E-value: 4.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 517 TPGGPPGAENSTSHQPATPGGDTAQTPKPGTSqpmPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPAT 596
Cdd:PRK07764 587 VVGPAPGAAGGEGPPAPASSGPPEEAARPAAP---AAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDAS 663
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1370459652 597 ---PGGGTAQTPEAGTSQPMPPgmgtsTSHQPTTPGGGTAQTPEPGTSQPMPLSKSTPSSGQRPDVGSSESHDSHG 669
Cdd:PRK07764 664 dggDGWPAKAGGAAPAAPPPAP-----APAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPA 734
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
450-616 |
4.33e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 47.09 E-value: 4.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 450 QVSEQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENSTS 529
Cdd:PHA03307 271 EASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRS 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 530 HQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTAQTPEAGT 609
Cdd:PHA03307 351 PSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARY 430
|
....*..
gi 1370459652 610 SQPMPPG 616
Cdd:PHA03307 431 PLLTPSG 437
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
453-657 |
5.13e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 46.41 E-value: 5.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 453 EQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPE-----PSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENS 527
Cdd:PRK12323 371 GAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAapaaaPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAP 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 528 TSHQPATPggdtAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPE-PGTSQPMPPSMGTSTSHQ--PATPGGGTAQT 604
Cdd:PRK12323 451 APAPAAAP----AAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDdPPPWEELPPEFASPAPAQpdAAPAGWVAESI 526
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1370459652 605 PEAGTSQPMPPGmgtstshqPTTPGGGTAQTPEPGTSQPMPLSKSTPSSGQRP 657
Cdd:PRK12323 527 PDPATADPDDAF--------ETLAPAPAAAPAPRAAAATEPVVAPRPPRASAS 571
|
|
| PRK13700 |
PRK13700 |
conjugal transfer protein TraD; Provisional |
544-620 |
6.08e-05 |
|
conjugal transfer protein TraD; Provisional
Pssm-ID: 184256 [Multi-domain] Cd Length: 732 Bit Score: 46.49 E-value: 6.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 544 KPGTSQPMPPGVGTSTSHQPATPSGGTAQTPePGTSQPMPPSMG-TSTSHQPATPGGGT----AQTPEAGTSQPMPPGMG 618
Cdd:PRK13700 604 EPDVPEVASGEDVTQAEQPQQPQQPQQPQQP-QQPQQPVSPVINdKKSDAGVNVPAGGIeqelKMKPEEEMEQQLPPGIS 682
|
..
gi 1370459652 619 TS 620
Cdd:PRK13700 683 ES 684
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
452-615 |
7.55e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 46.13 E-value: 7.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 452 SEQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGttlrPPTSSTPGGPPGAENSTSHQ 531
Cdd:PRK07764 625 AAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAA----PPPAPAPAAPAAPAGAAPAQ 700
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 532 PATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTAQTPEAGTSQ 611
Cdd:PRK07764 701 PAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPS 780
|
....
gi 1370459652 612 PMPP 615
Cdd:PRK07764 781 EEEE 784
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
456-628 |
1.29e-04 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 45.30 E-value: 1.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 456 PPSTDVPPSPEAGGTTGPWTSTTSEVPRPPePSQGPSTTSSGGGTGPHPPSGTT----LRPPTSSTPGGPPGAENSTSHQ 531
Cdd:PLN03209 390 PPSSSPASSKSVDAVAKPAEPDVVPSPGSA-SNVPEVEPAQVEAKKTRPLSPYAryedLKPPTSPSPTAPTGVSPSVSST 468
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 532 PATPG-GDTA--------QTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTA 602
Cdd:PLN03209 469 SSVPAvPDTApataatdaAAPPPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHA 548
|
170 180
....*....|....*....|....*..
gi 1370459652 603 Q-TPEAGTSQPMPPGMGTSTSHQPTTP 628
Cdd:PLN03209 549 QpKPRPLSPYTMYEDLKPPTSPTPSPV 575
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
420-662 |
1.56e-04 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 44.91 E-value: 1.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 420 TTLAQAGAFYAEVEAHNTVTSGTATTVIEIQVSEQEPPSTDVPPSPEAGGTTGPWTST------------TSEVPRPPEP 487
Cdd:pfam05109 413 TTTTHKVIFSKAPESTTTSPTLNTTGFAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTadvtsptpagttSGASPVTPSP 492
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 488 SQGPSTTSSGGGTGPHPPSGTTLRPP--TSSTPGGPPGAENSTSHQPATPGGDTA-QTPKPGTSQPMpPGVGTSTSHQPA 564
Cdd:pfam05109 493 SPRDNGTESKAPDMTSPTSAVTTPTPnaTSPTPAVTTPTPNATSPTLGKTSPTSAvTTPTPNATSPT-PAVTTPTPNATI 571
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 565 TPSGGTAQTPEPGTSQP--MPPSMGTSTSHQPATPG--GGTAQTPEAgTSQPMPPGMGTSTSHQPTTPGGGTAQTPEPGT 640
Cdd:pfam05109 572 PTLGKTSPTSAVTTPTPnaTSPTVGETSPQANTTNHtlGGTSSTPVV-TSPPKNATSAVTTGQHNITSSSTSSMSLRPSS 650
|
250 260
....*....|....*....|...
gi 1370459652 641 -SQPMPLSKSTPSSGQRPDVGSS 662
Cdd:pfam05109 651 iSETLSPSTSDNSTSHMPLLTSA 673
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
540-655 |
2.39e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.59 E-value: 2.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 540 AQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEP-GTSQPMP-PSMGTSTSHQPATPGGGTAQTPEAGTSQPMPPG- 616
Cdd:PRK07764 389 GGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPaAAPQPAPaPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAp 468
|
90 100 110
....*....|....*....|....*....|....*....
gi 1370459652 617 MGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKSTPSSGQ 655
Cdd:PRK07764 469 APAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGAD 507
|
|
| PRK11901 |
PRK11901 |
hypothetical protein; Reviewed |
514-657 |
2.71e-04 |
|
hypothetical protein; Reviewed
Pssm-ID: 237015 [Multi-domain] Cd Length: 327 Bit Score: 43.52 E-value: 2.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 514 TSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTsqpMPPGVGTSTSHQPATPSGGTAQTPEPGT-----SQ------PM 582
Cdd:PRK11901 87 LSSGNQSSPSAANNTSDGHDASGVKNTAPPQDIS---APPISPTPTQAAPPQTPNGQQRIELPGNisdalSQqqgqvnAA 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 583 PPSMGTSTSHQP---ATPGGGTAQTPEAGTSQPMPPGMGTSTSHQPT--TPGGGTAQTPEPgTSQPMPLSKSTPSSGQRP 657
Cdd:PRK11901 164 SQNAQGNTSTLPtapATVAPSKGAKVPATAETHPTPPQKPATKKPAVnhHKTATVAVPPAT-SGKPKSGAASARALSSAP 242
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
507-620 |
2.77e-04 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 43.84 E-value: 2.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 507 GTTLRPPTSSTPGGPPGAENSTShqPATPGGDTAQT-PKPGTSQPMPPG---VGTSTSHQPATPSGGTAQTPEPGTSQPM 582
Cdd:PHA03264 252 GVVPPYFEESKGYEPPPAPSGGS--PAPPGDDRPEAkPEPGPVEDGAPGretGGEGEGPEPAGRDGAAGGEPKPGPPRPA 329
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1370459652 583 PPSMGTS-------TSHQPATPGggtaqTPEAGTSQPMPPGMGTS 620
Cdd:PHA03264 330 PDADRPEgwpsleaITFPPPTPA-----TPAVPRARPVIVGTGIA 369
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
564-654 |
3.78e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 43.61 E-value: 3.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 564 ATPSGGTAQTPEPGTSQPM---PPSMGTSTSHQP------ATPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTAQ 634
Cdd:PRK14971 369 ASGGRGPKQHIKPVFTQPAaapQPSAAAAASPSPsqssaaAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQAVR 448
|
90 100
....*....|....*....|
gi 1370459652 635 TPEPGTSQPMPLSKsTPSSG 654
Cdd:PRK14971 449 PAQFKEEKKIPVSK-VSSLG 467
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
454-673 |
3.79e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.01 E-value: 3.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 454 QEPPSTDvPPSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLR-----------PPTSSTPGGPP 522
Cdd:PHA03307 111 PSSPDPP-PPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAAssrqaalplssPEETARAPSSP 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 523 GAENSTSHQPATPGGDTAQTPKP-----GTSQPMPP-----GVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSh 592
Cdd:PHA03307 190 PAEPPPSTPPAAASPRPPRRSSPisasaSSPAPAPGrsaadDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTR- 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 593 qPATPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEPgtsqpmplsKSTPSSGQRPDVGSSESHDSHGCRS 672
Cdd:PHA03307 269 -IWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPR---------ASSSSSSSRESSSSSTSSSSESSRG 338
|
.
gi 1370459652 673 P 673
Cdd:PHA03307 339 A 339
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
504-676 |
3.95e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.01 E-value: 3.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 504 PPSGTTLRPP-----TSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGtAQTPEPGT 578
Cdd:PHA03307 72 PPGPGTEAPAnesrsTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVG-SPGPPPAA 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 579 SQPMPPSMGTSTSHQPATPGGGT--AQTPEAgTSQPMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKSTPSSGQR 656
Cdd:PHA03307 151 SPPAAGASPAAVASDAASSRQAAlpLSSPEE-TARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAA 229
|
170 180
....*....|....*....|
gi 1370459652 657 PDVGSSESHDSHGCRSPCKS 676
Cdd:PHA03307 230 DDAGASSSDSSSSESSGCGW 249
|
|
| PRK13700 |
PRK13700 |
conjugal transfer protein TraD; Provisional |
514-589 |
4.99e-04 |
|
conjugal transfer protein TraD; Provisional
Pssm-ID: 184256 [Multi-domain] Cd Length: 732 Bit Score: 43.41 E-value: 4.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 514 TSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVG-TSTSHQPATPSGGT----AQTPEPGTSQPMPPSMGT 588
Cdd:PRK13700 604 EPDVPEVASGEDVTQAEQPQQPQQPQQPQQPQQPQQPVSPVINdKKSDAGVNVPAGGIeqelKMKPEEEMEQQLPPGISE 683
|
.
gi 1370459652 589 S 589
Cdd:PRK13700 684 S 684
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
456-654 |
5.43e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.39 E-value: 5.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 456 PPSTDVPPSPEAGGTTGP-----WTSTTSEVPRPPEpsqgpsttssgggtgpHPPSGTTLRPPTSSTPggPPGAENSTS- 529
Cdd:PHA03247 310 PAPPDPPPPAPAGDAEEEddedgAMEVVSPLPRPRQ----------------HYPLGFPKRRRPTWTP--PSSLEDLSAg 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 530 --HQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTP-EPGTSQPMPPSmgTSTSHQPATPGGGTAQTPE 606
Cdd:PHA03247 372 rhHPKRASLPTRKRRSARHAATPFARGPGGDDQTRPAAPVPASVPTPaPTPVPASAPPP--PATPLPSAEPGSDDGPAPP 449
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1370459652 607 AGTSQPMPPGMGTSTSHQPTTPGG----GTAQTPEPGTSQPMPLSKSTPSSG 654
Cdd:PHA03247 450 PERQPPAPATEPAPDDPDDATRKAldalRERRPPEPPGADLAELLGRHPDTA 501
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
533-629 |
5.76e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 43.23 E-value: 5.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 533 ATPGGDTAQTPKPGTSQPM---PPGVGTSTSHQP------ATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTAQ 603
Cdd:PRK14971 369 ASGGRGPKQHIKPVFTQPAaapQPSAAAAASPSPsqssaaAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQAVR 448
|
90 100
....*....|....*....|....*.
gi 1370459652 604 TPEAGTSQPMPPgMGTSTSHQPTTPG 629
Cdd:PRK14971 449 PAQFKEEKKIPV-SKVSSLGPSTLRP 473
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
513-658 |
7.13e-04 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 41.81 E-value: 7.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 513 PTSSTPGGPPGAENSTSHQPATPGGDTAQTP-KPGTSQPMPPGVGTSTSHQPATpSGGTAQTPEPGTSQPMPPSMGTSTS 591
Cdd:PHA03255 29 SSTASAGNVTGTTAVTTPSPSASGPSTNQSTtLTTTSAPITTTAILSTNTTTVT-STGTTVTPVPTTSNASTINVTTKVT 107
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1370459652 592 HQ--PATPGGGTAQTPEAGTSQPmppgMGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKSTPSSGQRPD 658
Cdd:PHA03255 108 AQniTATEAGTGTSTGVTSNVTT----RSSSTTSATTRITNATTLAPTLSSKGTSNATKTTAELPTVPD 172
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
452-677 |
8.19e-04 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 42.73 E-value: 8.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 452 SEQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPE--------PSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPggPPG 523
Cdd:PHA03377 668 SRRQPATQSTPPRPSWLPSVFVLPSVDAGRAQPSEeshlssmsPTQPISHEEQPRYEDPDDPLDLSLHPDQAPPP--SHQ 745
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 524 AENSTSHQPATPggdtaQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPE---PGTSQPMPPSMGTSTSHQPATPGGG 600
Cdd:PHA03377 746 APYSGHEEPQAQ-----QAPYPGYWEPRPPQAPYLGYQEPQAQGVQVSSYPGyagPWGLRAQHPRYRHSWAYWSQYPGHG 820
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1370459652 601 TAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKSTPSSGQRPDVGSSESHDSHGCRSPCKSL 677
Cdd:PHA03377 821 HPQGPWAPRPPHLPPQWDGSAGHGQDQVSQFPHLQSETGPPRLQLSQVPQLPYSQTLVSSSAPSWSSPQPRAPIRPI 897
|
|
| motB |
PRK12799 |
flagellar motor protein MotB; Reviewed |
523-642 |
1.06e-03 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 42.01 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 523 GAENSTSHQPATPGGDTAQTPKPGTSQPMPPG---VGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGG 599
Cdd:PRK12799 294 DTHGTVPVAAVTPSSAVTQSSAITPSSAAIPSpavIPSSVTTQSATTTQASAVALSSAGVLPSDVTLPGTVALPAAEPVN 373
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1370459652 600 GTAQTPEAGTSQPMPPGMGTSTSHQPTT--PGGGTAQTPEPGTSQ 642
Cdd:PRK12799 374 MQPQPMSTTETQQSSTGNITSTANGPTTslPAAPASNIPVSPTSR 418
|
|
| SPT5 |
COG5164 |
Transcription elongation factor SPT5 [Transcription]; |
440-646 |
1.19e-03 |
|
Transcription elongation factor SPT5 [Transcription];
Pssm-ID: 444063 [Multi-domain] Cd Length: 495 Bit Score: 41.94 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 440 SGTATTVIEIQVSEQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGpsttssgggtgphPPSGTTLRPPTSSTPG 519
Cdd:COG5164 68 NQGATGPAQNQGGTTPAQNQGGTRPAGNTGGTTPAGDGGATGPPDDGGATG-------------PPDDGGSTTPPSGGST 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 520 GPPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTShqpATPSGGTAQTPEPGTSQPMPPSMGTSTSHQ--PATP 597
Cdd:COG5164 135 TPPGDGGSTPPGPGSTGPGGSTTPPGDGGSTTPPGPGGSTT---PPDDGGSTTPPNKGETGTDIPTGGTPRQGPdgPVKK 211
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1370459652 598 GGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQPMPL 646
Cdd:COG5164 212 DDKNGKGNPPDDRGGKTGPKDQRPKTNPIERRGPERPEAAALPAELTAL 260
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
554-658 |
1.23e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.28 E-value: 1.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 554 GVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTA 633
Cdd:PRK07764 384 RLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPS 463
|
90 100
....*....|....*....|....*...
gi 1370459652 634 QTPEPGTSQPMPLSKS---TPSSGQRPD 658
Cdd:PRK07764 464 AQPAPAPAAAPEPTAApapAPPAAPAPA 491
|
|
| PRK14959 |
PRK14959 |
DNA polymerase III subunits gamma and tau; Provisional |
540-672 |
1.67e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184923 [Multi-domain] Cd Length: 624 Bit Score: 41.59 E-value: 1.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 540 AQTPKPGTSQPMPPGVG----TSTSHQPATPSGGTAQTPEPGTSQPM---PPSMGTSTSHQPATPGGGTAQTPEA--GTS 610
Cdd:PRK14959 360 AMLPRLMPVESLRPSGGgasaPSGSAAEGPASGGAATIPTPGTQGPQgtaPAAGMTPSSAAPATPAPSAAPSPRVpwDDA 439
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1370459652 611 QPMPPGMGTSTSHQPTTPGGgtaqTPEPGTSQPMPLSKSTPSSGQRPDvgSSESHDSHGCRS 672
Cdd:PRK14959 440 PPAPPRSGIPPRPAPRMPEA----SPVPGAPDSVASASDAPPTLGDPS--DTAEHTPSGPRT 495
|
|
| PRK12495 |
PRK12495 |
hypothetical protein; Provisional |
564-667 |
1.88e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 183558 [Multi-domain] Cd Length: 226 Bit Score: 40.24 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 564 ATPSGGTAQTPEPGTSQPMPPSmgtSTSHQPATPGGGTAQ-TPEAGTSQPMPPGMGTSTSHQPTtpgGGTAQTPEPGTSQ 642
Cdd:PRK12495 85 TAPSDAGSQASPDDDAQPAAEA---EAADQSAPPEASSTSaTDEAATDPPATAAARDGPTPDPT---AQPATPDERRSPR 158
|
90 100
....*....|....*....|....*
gi 1370459652 643 PMPLSKSTPSSGQRPDVGSSESHDS 667
Cdd:PRK12495 159 QRPPVSGEPPTPSTPDAHVAGTLQA 183
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
504-629 |
1.90e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 41.24 E-value: 1.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 504 PPSGTTLRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPgTSQPMP 583
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAP-AAAPAA 444
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1370459652 584 PSMGTSTSHQPA----TPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPG 629
Cdd:PRK14951 445 VALAPAPPAQAApetvAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEG 494
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
503-657 |
1.94e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 41.48 E-value: 1.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 503 HPPSGTTLRPPTSSTpGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPMP------PGVGTSTSHQPATPSGGTAQTPEP 576
Cdd:pfam17823 90 HTPHGTDLSEPATRE-GAADGAASRALAAAASSSPSSAAQSLPAAIAALPseafsaPRAAACRANASAAPRAAIAAASAP 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 577 GTSQPMPPSMGTSTSHQPATPGGGTAQTPEAGTS-QPMPPGMGTSTSHQPT-TPGGGTAqTPEPGTSQPMPLSKSTPSSG 654
Cdd:pfam17823 169 HAASPAPRTAASSTTAASSTTAASSAPTTAASSApATLTPARGISTAATATgHPAAGTA-LAAVGNSSPAAGTVTAAVGT 247
|
...
gi 1370459652 655 QRP 657
Cdd:pfam17823 248 VTP 250
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
465-671 |
2.00e-03 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 41.19 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 465 PEAGGTTGPWTSTTSEVPRPPEPSQGPSTTssgggtgpHPPSG--TTLRPPTSSTPGGPPGAENSTSHQPATPggdtAQT 542
Cdd:pfam05539 168 PKTAVTTSKTTSWPTEVSHPTYPSQVTPQS--------QPATQghQTATANQRLSSTEPVGTQGTTTSSNPEP----QTE 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 543 PKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSmGTSTSHQPATPgggTAQTPEAGTSQPMPPGMGTSTS 622
Cdd:pfam05539 236 PPPSQRGPSGSPQHPPSTTSQDQSTTGDGQEHTQRRKTPPATS-NRRSPHSTATP---PPTTKRQETGRPTPRPTATTQS 311
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1370459652 623 HQPTTPGGGTAQTPEPGTSQPMPLSKSTPSSGQR--PDVGSSESHDSHGCR 671
Cdd:pfam05539 312 GSSPPHSSPPGVQANPTTQNLVDCKELDPPKPNSicYGVGIYNEALPRGCD 362
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
445-634 |
2.28e-03 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 41.35 E-value: 2.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 445 TVIEIQVSEQEPPSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPS---QGPSTTSSGGGTGPHPPSGTTLRPPTSSTP--- 518
Cdd:PRK14086 91 SAGEPAPPPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPrqdQLPTARPAYPAYQQRPEPGAWPRAADDYGWqqq 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 519 --GGPPGAENSTSHQPATPGGDTAQTP---KPGTSQPMPPGVGTSTSHQPatPSGGTAQTPEPgtsqpmPPSMGTSTSHQ 593
Cdd:PRK14086 171 rlGFPPRAPYASPASYAPEQERDREPYdagRPEYDQRRRDYDHPRPDWDR--PRRDRTDRPEP------PPGAGHVHRGG 242
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1370459652 594 PATPGGGTAQTPEAGTSQPMPPGMGTSTShqpTTPGGGTAQ 634
Cdd:PRK14086 243 PGPPERDDAPVVPIRPSAPGPLAAQPAPA---PGPGEPTAR 280
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
438-604 |
2.32e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 40.88 E-value: 2.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 438 VTSGTAT-TVIEIQVSEQEPPSTDVPPSPEAGG------TTGPWTSTT----SEVPRPPEPSQGPSTTSSGggtgphppS 506
Cdd:PRK13335 16 LTTGAITvTTQSVKAEKIQSTKVDKVPTLKAERlaminiTAGANSATTqaanTRQERTPKLEKAPNTNEEK--------T 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 507 GTTLRPPTSStpggPPGAENSTSHQPATPGgdtaqtpkPGTSQPmppgvgtSTSHQPATPSggTAQTPEPGTSQPMPpsM 586
Cdd:PRK13335 88 SASKIEKISQ----PKQEEQKSLNISATPA--------PKQEQS-------QTTTESTTPK--TKVTTPPSTNTPQP--M 144
|
170
....*....|....*...
gi 1370459652 587 GTSTSHQPATPGGGTAQT 604
Cdd:PRK13335 145 QSTKSDTPQSPTIKQAQT 162
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
508-616 |
2.53e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 40.95 E-value: 2.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 508 TTLRPPTSSTPGGPpgaeNSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMG 587
Cdd:PRK14950 358 ALLVPVPAPQPAKP----TAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTR 433
|
90 100 110
....*....|....*....|....*....|
gi 1370459652 588 TStshqpatpgggtAQTPEAGTS-QPMPPG 616
Cdd:PRK14950 434 AA------------IPVDEKPKYtPPAPPK 451
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
456-671 |
2.54e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 41.29 E-value: 2.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 456 PPSTDVPPSPEAGG------TTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPP------SGTTLRPPtsstPGGPPG 523
Cdd:pfam03154 358 PPTTPIPQLPNPQShkhpphLSGPSPFQMNSNLPPPPALKPLSSLSTHHPPSAHPPplqlmpQSQQLPPP----PAQPPV 433
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 524 AENSTSHQPAtpggdTAQTPKPGTSQPMPPgvGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMgtSTSHQPATPGGGTAQ 603
Cdd:pfam03154 434 LTQSQSLPPP-----AASHPPTSGLHQVPS--QSPFPQHPFVPGGPPPITPPSGPPTSTSSAM--PGIQPPSSASVSSSG 504
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1370459652 604 TPEAGTSQPMPPgmgTSTSHQPTTpgggtaQTPEPGTSQPMPLSKSTPssgqrPDVGSSESHDSHGCR 671
Cdd:pfam03154 505 PVPAAVSCPLPP---VQIKEEALD------EAEEPESPPPPPRSPSPE-----PTVVNTPSHASQSAR 558
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
513-638 |
2.57e-03 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 40.87 E-value: 2.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 513 PTSSTPGGPPGAENSTSHQPATPggDTAQTPKPGTSQPMPPGVgtsTSHQPATpsggtaQTPEPGTSqpmppsmgtSTSH 592
Cdd:PHA03269 46 PHQAASRAPDPAVAPTSAASRKP--DLAQAPTPAASEKFDPAP---APHQAAS------RAPDPAVA---------PQLA 105
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1370459652 593 QPATPGGGTAQTpEAGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEP 638
Cdd:PHA03269 106 AAPKPDAAEAFT-SAAQAHEAPADAGTSAASKKPDPAAHTQHSPPP 150
|
|
| motB |
PRK12799 |
flagellar motor protein MotB; Reviewed |
523-656 |
2.71e-03 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 40.85 E-value: 2.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 523 GAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTStshQPATpSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTA 602
Cdd:PRK12799 289 GLKQIDTHGTVPVAAVTPSSAVTQSSAITPSSAAIP---SPAV-IPSSVTTQSATTTQASAVALSSAGVLPSDVTLPGTV 364
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1370459652 603 QTPEAGTSQPMPPGMGTSTSHQPTTpGGGTAQTPEPGTSQP-MPLSKSTPSSGQR 656
Cdd:PRK12799 365 ALPAAEPVNMQPQPMSTTETQQSST-GNITSTANGPTTSLPaAPASNIPVSPTSR 418
|
|
| PHA03132 |
PHA03132 |
thymidine kinase; Provisional |
460-657 |
2.89e-03 |
|
thymidine kinase; Provisional
Pssm-ID: 222997 [Multi-domain] Cd Length: 580 Bit Score: 40.90 E-value: 2.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 460 DVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTP-GGPPGAENSTSHQPATPGGD 538
Cdd:PHA03132 53 DLYPPRETGSGGGVATSTIYTVPRPPRGPEQTLDKPDSLPASRELPPGPTPVPPGGFRGaSSPRLGADSTSPRFLYQVNF 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 539 TAQtpkPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGT--AQTPEAGTSQPMPPG 616
Cdd:PHA03132 133 PVI---LAPIGESNSSSEELSEEEEHSRPPPSESLKVKNGGKVYPKGFSKHKTHKRSEFSGLTkkAARKRKGSFVFKPSQ 209
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1370459652 617 M---GTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKSTPSSGQRP 657
Cdd:PHA03132 210 LkelSGSLKNLLHLDDSAETDPATRQVPVPVHVLYPPLLTEYVP 253
|
|
| PRK12495 |
PRK12495 |
hypothetical protein; Provisional |
513-634 |
3.04e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 183558 [Multi-domain] Cd Length: 226 Bit Score: 39.85 E-value: 3.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 513 PTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPePGTSQPMPPSMGTSTSH 592
Cdd:PRK12495 62 PTCQQPVTEDGAAGDDAGDGAEATAPSDAGSQASPDDDAQPAAEAEAADQSAPPEASSTSAT-DEAATDPPATAAARDGP 140
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1370459652 593 QPATPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTAQ 634
Cdd:PRK12495 141 TPDPTAQPATPDERRSPRQRPPVSGEPPTPSTPDAHVAGTLQ 182
|
|
| PAT1 |
pfam09770 |
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ... |
504-662 |
3.73e-03 |
|
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.
Pssm-ID: 401645 [Multi-domain] Cd Length: 846 Bit Score: 40.40 E-value: 3.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 504 PPSGTTLRPPTSSTPGGPPGAEN-------------STSHQPAT-PGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGG 569
Cdd:pfam09770 169 KAAAPAPAPQPAAQPASLPAPSRkmmsleeveaamrAQAKKPAQqPAPAPAQPPAAPPAQQAQQQQQFPPQIQQQQQPQQ 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 570 TAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTAQTPEAGTSQPMPPGMGTSTS--HQPTTPGGgtAQTPEPGtsQPMPLS 647
Cdd:pfam09770 249 QPQQPQQHPGQGHPVTILQRPQSPQPDPAQPSIQPQAQQFHQQPPPVPVQPTQilQNPNRLSA--ARVGYPQ--NPQPGV 324
|
170
....*....|....*
gi 1370459652 648 KSTPSSGQRPDVGSS 662
Cdd:pfam09770 325 QPAPAHQAHRQQGSF 339
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
465-602 |
4.11e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 40.35 E-value: 4.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 465 PEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSsgggtgphPPSGTTLRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPK 544
Cdd:PRK07764 386 GVAGGAGAPAAAAPSAAAAAPAAAPAPAAAA--------PAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPP 457
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1370459652 545 PGTSQPMPPG-VGTSTSHQPATPSGGTAQTPEPGTSQPMPPsmgtstshQPATPGGGTA 602
Cdd:PRK07764 458 PAAAPSAQPApAPAAAPEPTAAPAPAPPAAPAPAAAPAAPA--------APAAPAGADD 508
|
|
| SOBP |
pfam15279 |
Sine oculis-binding protein; SOBP is associated with syndromic and nonsyndromic intellectual ... |
451-645 |
4.24e-03 |
|
Sine oculis-binding protein; SOBP is associated with syndromic and nonsyndromic intellectual disability. It carries a zinc-finger of the zf-C2H2 type at the N-terminus, and a highly characteriztic C-terminal PhPhPhPhPhPh motif. The deduced 873-amino acid protein contains an N-terminal nuclear localization signal (NLS), followed by 2 FCS-type zinc finger motifs, a proline-rich region (PR1), a putative RNA-binding motif region, and a C-terminal NLS embedded in a second proline-rich motif. SOBP is expressed in various human tissues, including developing mouse brain at embryonic day 14. In postnatal and adult mouse brain SOBP is expressed in all neurons, with intense staining in the limbic system. Highest expression is in layer V cortical neurons, hippocampus, pyriform cortex, dorsomedial nucleus of thalamus, amygdala, and hypothalamus. Postnatal expression of SOBP in the limbic system corresponds to a time of active synaptogenesis. the family is also referred to as Jackson circler, JXC1. In seven affected siblings from a consanguineous Israeli Arab family with mental retardation, anterior maxillary protrusion, and strabismus mutations were found in this protein.
Pssm-ID: 464609 [Multi-domain] Cd Length: 325 Bit Score: 39.80 E-value: 4.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 451 VSEQEPPSTDVPP--SPEAGGTTGPWTSTTSE----VPRPPEPSQGPSTTSSGGGTGPHPPsgtTLRPPTSSTPGGPPGA 524
Cdd:pfam15279 91 ESVSPGPSSSASPssSPTSSNSSKPLISVASSskllAPKPHEPPSLPPPPLPPKKGRRHRP---GLHPPLGRPPGSPPMS 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 525 ENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGT-SQPMPPSMGTSTSHQPATPGGGTAQ 603
Cdd:pfam15279 168 MTPRGLLGKPQQHPPPSPLPAFMEPSSMPPPFLRPPPSIPQPNSPLSNPMLPGIgPPPKPPRNLGPPSNPMHRPPFSPHH 247
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1370459652 604 TPEAGTSQPMPPGMgtstshQPTTPGGGTAQTPEPGTSQPMP 645
Cdd:pfam15279 248 PPPPPTPPGPPPGL------PPPPPRGFTPPFGPPFPPVNMM 283
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
482-659 |
5.49e-03 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 39.75 E-value: 5.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 482 PRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPG-----GPPGAENSTSHQPATPGGDT---AQTPKPGTsQPMPP 553
Cdd:NF033839 292 PSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKpevkpQPEKPKPEVKPQLETPKPEVkpqPEKPKPEV-KPQPE 370
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 554 GVGTSTSHQPATPSGGTAQTPEPGTS--QPMPPSMGTSTSHQPATPGGGTAQTPEAGTSQ--PMPPGMGTSTSHQPTTPg 629
Cdd:NF033839 371 KPKPEVKPQPETPKPEVKPQPEKPKPevKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEvkPQPEKPKPEVKPQPEKP- 449
|
170 180 190
....*....|....*....|....*....|
gi 1370459652 630 gGTAQTPEPGTsqPMPLSKSTPSSgQRPDV 659
Cdd:NF033839 450 -KPEVKPQPET--PKPEVKPQPEK-PKPEV 475
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
512-644 |
6.04e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 40.07 E-value: 6.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 512 PPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTS 591
Cdd:PRK10263 751 PVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQY 830
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1370459652 592 HQPATPgggTAQTPEAGTSQPMPPGMGTSTS-HQPTTP-GGGTAQTPEPGTSQPM 644
Cdd:PRK10263 831 QQPQQP---VAPQPQDTLLHPLLMRNGDSRPlHKPTTPlPSLDLLTPPPSEVEPV 882
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
470-657 |
7.08e-03 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 39.52 E-value: 7.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 470 TTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENsTSHQPATPGGDTAQTPKPGTSQ 549
Cdd:PLN03209 309 TTAPLTPMEELLAKIPSQRVPPKESDAADGPKPVPTKPVTPEAPSPPIEEEPPQPKA-VVPRPLSPYTAYEDLKPPTSPI 387
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 550 PMPPgvgtsTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPAtpgggtaqTPEAGTSQPMPPGMGTSTSHQPTTPg 629
Cdd:PLN03209 388 PTPP-----SSSPASSKSVDAVAKPAEPDVVPSPGSASNVPEVEPA--------QVEAKKTRPLSPYARYEDLKPPTSP- 453
|
170 180
....*....|....*....|....*...
gi 1370459652 630 ggtAQTPEPGTSQPMPLSKSTPSSGQRP 657
Cdd:PLN03209 454 ---SPTAPTGVSPSVSSTSSVPAVPDTA 478
|
|
| Med15 |
pfam09606 |
ARC105 or Med15 subunit of Mediator complex non-fungal; The approx. 70 residue Med15 domain of ... |
513-645 |
7.28e-03 |
|
ARC105 or Med15 subunit of Mediator complex non-fungal; The approx. 70 residue Med15 domain of the ARC-Mediator co-activator is a three-helix bundle with marked similarity to the KIX domain. The sterol regulatory element binding protein (SREBP) family of transcription activators use the ARC105 subunit to activate target genes in the regulation of cholesterol and fatty acid homeostasis. In addition, Med15 is a critical transducer of gene activation signals that control early metazoan development.
Pssm-ID: 312941 [Multi-domain] Cd Length: 732 Bit Score: 39.61 E-value: 7.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 513 PTSSTPGGPPGAEN----STSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGt 588
Cdd:pfam09606 101 PMGPGPGGPMGQQMggpgTASNLLASLGRPQMPMGGAGFPSQMSRVGRMQPGGQAGGMMQPSSGQPGSGTPNQMGPNGG- 179
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1370459652 589 stSHQPATPGGGTAQtpEAGTSQPMPPGMGTSTSHQPTTPGGGtAQTPEPGTSQPMP 645
Cdd:pfam09606 180 --PGQGQAGGMNGGQ--QGPMGGQMPPQMGVPGMPGPADAGAQ-MGQQAQANGGMNP 231
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
461-591 |
7.33e-03 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 39.22 E-value: 7.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 461 VPPSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSsgggtgphpPSGTTLRPPTSSTPGGPPGAEnstshqPATPGGDTA 540
Cdd:PHA03264 254 VPPYFEESKGYEPPPAPSGGSPAPPGDDRPEAKPE---------PGPVEDGAPGRETGGEGEGPE------PAGRDGAAG 318
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1370459652 541 QTPKPGTSQPMPPGVGTS-------TSHQPATPSGgtaqtpePGTSQPMPPSMGTSTS 591
Cdd:PHA03264 319 GEPKPGPPRPAPDADRPEgwpsleaITFPPPTPAT-------PAVPRARPVIVGTGIA 369
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
415-663 |
7.38e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 39.56 E-value: 7.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 415 VVLTTTTLA---QAGAFYAEVEAHNTVTSGTATTVIEIQVSEQEPPSTDVPPSPEAGGTTgpwTSTTSEVPRPPEPSQGP 491
Cdd:pfam17823 70 VTLTKGTSAahlNSTEVTAEHTPHGTDLSEPATREGAADGAASRALAAAASSSPSSAAQS---LPAAIAALPSEAFSAPR 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 492 STTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSH-QPATPSGGT 570
Cdd:pfam17823 147 AAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAAtATGHPAAGT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 571 A------QTPEPGT-----SQPMPPSMGTSTSH-QPATPGGGTAQT--PEAGTSQPMPPGMGTSTSHQPTTPGGGTAQTP 636
Cdd:pfam17823 227 AlaavgnSSPAAGTvtaavGTVTPAALATLAAAaGTVASAAGTINMgdPHARRLSPAKHMPSDTMARNPAAPMGAQAQGP 306
|
250 260
....*....|....*....|....*..
gi 1370459652 637 EPGTSQPMPLSKSTPSSGQRPDVGSSE 663
Cdd:pfam17823 307 IIQVSTDQPVHNTAGEPTPSPSNTTLE 333
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
340-615 |
7.67e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 39.45 E-value: 7.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 340 VTVEAVAAAGSPPRFPQRLYRGTVARGAGAGVVVKDA-----AAPSQPLRIQAQDPEFSDLNSAITYRITNHShfrmEGE 414
Cdd:PRK07003 362 VTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAvtavtGAAGAALAPKAAAAAAATRAEAPPAAPAPPA----TAD 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 415 VVLTTTTLAQAGAFYAEVEAHNTVTSGTATTVIEIQVSEQEPPSTDVPPSP--EAGGTTGPWTSTTSEVPRPPEPSQGPS 492
Cdd:PRK07003 438 RGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAafEPAPRAAAPSAATPAAVPDARAPAAAS 517
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 493 TTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGA-------ENSTSHQPATPGGDTAQTPKPGTSQPMPPgvgtstshQPAT 565
Cdd:PRK07003 518 REDAPAAAAPPAPEARPPTPAAAAPAARAGGAaaaldvlRNAGMRVSSDRGARAAAAAKPAAAPAAAP--------KPAA 589
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1370459652 566 PSgGTAQTPEPGTSQPMPPSMGTSTSHQPatpgggtaqtPEAGTSQPMPP 615
Cdd:PRK07003 590 PR-VAVQVPTPRARAATGDAPPNGAARAE----------QAAESRGAPPP 628
|
|
| PPE |
COG5651 |
PPE-repeat protein [Function unknown]; |
456-669 |
7.94e-03 |
|
PPE-repeat protein [Function unknown];
Pssm-ID: 444372 [Multi-domain] Cd Length: 385 Bit Score: 39.11 E-value: 7.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 456 PPSTDVPPSPEAGGTTGPWTSTTSEVPRPPepsqgpsTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENSTSHQPATP 535
Cdd:COG5651 166 PFTQPPPTITNPGGLLGAQNAGSGNTSSNP-------GFANLGLTGLNQVGIGGLNSGSGPIGLNSGPGNTGFAGTGAAA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 536 GGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTAQTPEAGTSQPMPP 615
Cdd:COG5651 239 GAAAAAAAAAAAAGAGASAALASLAATLLNASSLGLAATAASSAATNLGLAGSPLGLAGGGAGAAAATGLGLGAGGAAGA 318
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1370459652 616 GMGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKSTPSSGQRPDVGSSESHDSHG 669
Cdd:COG5651 319 AGATGAGAALGAGAAAAAAGAAAGAGAAAAAAAGGAGGGGGGALGAGGGGGSAG 372
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
457-576 |
9.10e-03 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 39.33 E-value: 9.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 457 PSTDVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGpsttssgggtgphPPSGTTLRP-----PTSSTPGGPPGAENSTSHQ 531
Cdd:PHA03269 40 PDPAPAPHQAASRAPDPAVAPTSAASRKPDLAQA-------------PTPAASEKFdpapaPHQAASRAPDPAVAPQLAA 106
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1370459652 532 PATPGGDTAQTPKPgTSQPMPPGVGTSTSHQPATPSGGTAQTPEP 576
Cdd:PHA03269 107 APKPDAAEAFTSAA-QAHEAPADAGTSAASKKPDPAAHTQHSPPP 150
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
511-641 |
9.45e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 39.31 E-value: 9.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 511 RPPTSStpGGPPGAENSTSHQPATPGGDTA---QTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMG 587
Cdd:PRK14951 365 KPAAAA--EAAAPAEKKTPARPEAAAPAAApvaQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAP 442
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1370459652 588 TSTSHQPATPgggtAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEPGTS 641
Cdd:PRK14951 443 AAVALAPAPP----AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
476-612 |
9.56e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 39.13 E-value: 9.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370459652 476 STTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSST-PGGPPGAENSTSHQPATPGGDTAQTPKPGTSqpmppG 554
Cdd:pfam05109 695 STSSPAPRPGTTSQASGPGNSSTSTKPGEVNVTKGTPPKNATsPQAPSGQKTAVPTVTSTGGKANSTTGGKHTT-----G 769
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1370459652 555 VGTSTSHQPATPSGGTAQTPEP--GTSQPMPPSmgTSTSHQP----ATPGGGTAQT--PEAGTSQP 612
Cdd:pfam05109 770 HGARTSTEPTTDYGGDSTTPRTryNATTYLPPS--TSSKLRPrwtfTSPPVTTAQAtvPVPPTSQP 833
|
|
| |
