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Conserved domains on  [gi|1370470119|ref|XP_024306337|]
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cyclin N-terminal domain-containing protein 1 isoform X1 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYCLIN_CNTD1 cd20541
cyclin box found in Cyclin N-terminal domain-containing protein 1 (CNTD1) and similar proteins; ...
 5-125 2.67e-46

cyclin box found in Cyclin N-terminal domain-containing protein 1 (CNTD1) and similar proteins; CNTD1 is a cyclin-related protein critical for meiotic crossover maturation and deselection of excess precrossover sites. CNTD1 contains one cyclin box. The cyclin box is a protein binding domain.


:

Pssm-ID: 410244  Cd Length: 127  Bit Score: 150.43  E-value: 2.67e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370470119   5 EFVFLLSEQWCLEKSVSYQAVEILERFMVKQAENICRQATIQPRdNKRESQNWRALKQQLVNKFTLRLVSCVQLASKLSF 84
Cdd:cd20541     8 EFVFLLCEKLGLPPEVKYLAVELFDRFMSRHIEELYKSVRESNK-IKGKKEEWKEVESRLSKQLPLRLVSCVQLASKLSS 86

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1370470119  85 RNKIISNITVLNFLQALGYLHTKEELLESELDVLKSLNFRI 125
Cdd:cd20541    87 HYKIVSANKAKNFLQSLGHPYTKSSILKSELRVLKTLNFRV 127
 
Name Accession Description Interval E-value
CYCLIN_CNTD1 cd20541
cyclin box found in Cyclin N-terminal domain-containing protein 1 (CNTD1) and similar proteins; ...
 5-125 2.67e-46

cyclin box found in Cyclin N-terminal domain-containing protein 1 (CNTD1) and similar proteins; CNTD1 is a cyclin-related protein critical for meiotic crossover maturation and deselection of excess precrossover sites. CNTD1 contains one cyclin box. The cyclin box is a protein binding domain.


Pssm-ID: 410244  Cd Length: 127  Bit Score: 150.43  E-value: 2.67e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370470119   5 EFVFLLSEQWCLEKSVSYQAVEILERFMVKQAENICRQATIQPRdNKRESQNWRALKQQLVNKFTLRLVSCVQLASKLSF 84
Cdd:cd20541     8 EFVFLLCEKLGLPPEVKYLAVELFDRFMSRHIEELYKSVRESNK-IKGKKEEWKEVESRLSKQLPLRLVSCVQLASKLSS 86

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1370470119  85 RNKIISNITVLNFLQALGYLHTKEELLESELDVLKSLNFRI 125
Cdd:cd20541    87 HYKIVSANKAKNFLQSLGHPYTKSSILKSELRVLKTLNFRV 127
 
Name Accession Description Interval E-value
CYCLIN_CNTD1 cd20541
cyclin box found in Cyclin N-terminal domain-containing protein 1 (CNTD1) and similar proteins; ...
 5-125 2.67e-46

cyclin box found in Cyclin N-terminal domain-containing protein 1 (CNTD1) and similar proteins; CNTD1 is a cyclin-related protein critical for meiotic crossover maturation and deselection of excess precrossover sites. CNTD1 contains one cyclin box. The cyclin box is a protein binding domain.


Pssm-ID: 410244  Cd Length: 127  Bit Score: 150.43  E-value: 2.67e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370470119   5 EFVFLLSEQWCLEKSVSYQAVEILERFMVKQAENICRQATIQPRdNKRESQNWRALKQQLVNKFTLRLVSCVQLASKLSF 84
Cdd:cd20541     8 EFVFLLCEKLGLPPEVKYLAVELFDRFMSRHIEELYKSVRESNK-IKGKKEEWKEVESRLSKQLPLRLVSCVQLASKLSS 86

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1370470119  85 RNKIISNITVLNFLQALGYLHTKEELLESELDVLKSLNFRI 125
Cdd:cd20541    87 HYKIVSANKAKNFLQSLGHPYTKSSILKSELRVLKTLNFRV 127
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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