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Conserved domains on  [gi|1958648541|ref|XP_038942954|]
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dapper homolog 3 isoform X1 [Rattus norvegicus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Dapper super family cl25914
Dapper; This is a family of signalling proteins. They act in a diverse range of signaling ...
 550-610 8.60e-11

Dapper; This is a family of signalling proteins. They act in a diverse range of signaling pathways and have a range of binding partners. They act as homo- and heterodimers.


The actual alignment was detected with superfamily member pfam15268:

Pssm-ID: 464605  Cd Length: 766  Bit Score: 65.13  E-value: 8.60e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958648541 550 LVWPQqlvaaaGASPSGPGGAAGGGTPAGPAKVFVKIKASHALKKKILRFRSGSLKVMTTV 610
Cdd:pfam15268 712 LVWPQ------AVQGPPAAGRPLLPPVSRPEPKFCRIKASHALKKKIRRFQPASLKVMTMV 766
 
Name Accession Description Interval E-value
Dapper pfam15268
Dapper; This is a family of signalling proteins. They act in a diverse range of signaling ...
 550-610 8.60e-11

Dapper; This is a family of signalling proteins. They act in a diverse range of signaling pathways and have a range of binding partners. They act as homo- and heterodimers.


Pssm-ID: 464605  Cd Length: 766  Bit Score: 65.13  E-value: 8.60e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958648541 550 LVWPQqlvaaaGASPSGPGGAAGGGTPAGPAKVFVKIKASHALKKKILRFRSGSLKVMTTV 610
Cdd:pfam15268 712 LVWPQ------AVQGPPAAGRPLLPPVSRPEPKFCRIKASHALKKKIRRFQPASLKVMTMV 766
 
Name Accession Description Interval E-value
Dapper pfam15268
Dapper; This is a family of signalling proteins. They act in a diverse range of signaling ...
 550-610 8.60e-11

Dapper; This is a family of signalling proteins. They act in a diverse range of signaling pathways and have a range of binding partners. They act as homo- and heterodimers.


Pssm-ID: 464605  Cd Length: 766  Bit Score: 65.13  E-value: 8.60e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958648541 550 LVWPQqlvaaaGASPSGPGGAAGGGTPAGPAKVFVKIKASHALKKKILRFRSGSLKVMTTV 610
Cdd:pfam15268 712 LVWPQ------AVQGPPAAGRPLLPPVSRPEPKFCRIKASHALKKKIRRFQPASLKVMTMV 766
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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