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Conserved domains on  [gi|1958763681|ref|XP_038961668|]
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protein-glutamine gamma-glutamyltransferase 2 isoform X1 [Rattus norvegicus]

Protein Classification

Transglut_C domain-containing protein( domain architecture ID 10469221)

Transglut_C domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Transglut_C pfam00927
Transglutaminase family, C-terminal ig like domain;
132-231 7.81e-30

Transglutaminase family, C-terminal ig like domain;


:

Pssm-ID: 460002  Cd Length: 106  Bit Score: 110.12  E-value: 7.81e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958763681 132 VAMRIRVGDGMSLGNDFDVFAHIGNDTSES-RECRLLLCARTVSYNGVLGPECGTEDINLTLDPYSENSIPLRILYEKY- 209
Cdd:pfam00927   1 PEMKIEVLGSAVVGQDLTVSVTLSNPLSEPlKDVVLSLSAQTVEYNGVLGAEFKKKSLELTLEPGEEKSVPIKITPSKYg 80
                          90       100
                  ....*....|....*....|....*.
gi 1958763681 210 -SGCLTE---SNLIKVRGLLVEPAAN 231
Cdd:pfam00927  81 pRQLLVEfssDALAKVKGYRNVLVAQ 106
Transglut_C pfam00927
Transglutaminase family, C-terminal ig like domain;
245-344 2.64e-23

Transglutaminase family, C-terminal ig like domain;


:

Pssm-ID: 460002  Cd Length: 106  Bit Score: 92.79  E-value: 2.64e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958763681 245 PEIKIRILGEPKQNRKLVAEVSLKNPLSDSLYDCVF-----TVEGAGLTK-EQKSVEVSDPVPAGDAVKVRVDLFPTDIG 318
Cdd:pfam00927   1 PEMKIEVLGSAVVGQDLTVSVTLSNPLSEPLKDVVLslsaqTVEYNGVLGaEFKKKSLELTLEPGEEKSVPIKITPSKYG 80
                          90       100
                  ....*....|....*....|....*.
gi 1958763681 319 LHKLVVNFQCDKLKSVKGYRNIIIGP 344
Cdd:pfam00927  81 PRQLLVEFSSDALAKVKGYRNVLVAQ 106
 
Name Accession Description Interval E-value
Transglut_C pfam00927
Transglutaminase family, C-terminal ig like domain;
132-231 7.81e-30

Transglutaminase family, C-terminal ig like domain;


Pssm-ID: 460002  Cd Length: 106  Bit Score: 110.12  E-value: 7.81e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958763681 132 VAMRIRVGDGMSLGNDFDVFAHIGNDTSES-RECRLLLCARTVSYNGVLGPECGTEDINLTLDPYSENSIPLRILYEKY- 209
Cdd:pfam00927   1 PEMKIEVLGSAVVGQDLTVSVTLSNPLSEPlKDVVLSLSAQTVEYNGVLGAEFKKKSLELTLEPGEEKSVPIKITPSKYg 80
                          90       100
                  ....*....|....*....|....*.
gi 1958763681 210 -SGCLTE---SNLIKVRGLLVEPAAN 231
Cdd:pfam00927  81 pRQLLVEfssDALAKVKGYRNVLVAQ 106
Transglut_C pfam00927
Transglutaminase family, C-terminal ig like domain;
245-344 2.64e-23

Transglutaminase family, C-terminal ig like domain;


Pssm-ID: 460002  Cd Length: 106  Bit Score: 92.79  E-value: 2.64e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958763681 245 PEIKIRILGEPKQNRKLVAEVSLKNPLSDSLYDCVF-----TVEGAGLTK-EQKSVEVSDPVPAGDAVKVRVDLFPTDIG 318
Cdd:pfam00927   1 PEMKIEVLGSAVVGQDLTVSVTLSNPLSEPLKDVVLslsaqTVEYNGVLGaEFKKKSLELTLEPGEEKSVPIKITPSKYG 80
                          90       100
                  ....*....|....*....|....*.
gi 1958763681 319 LHKLVVNFQCDKLKSVKGYRNIIIGP 344
Cdd:pfam00927  81 PRQLLVEFSSDALAKVKGYRNVLVAQ 106
 
Name Accession Description Interval E-value
Transglut_C pfam00927
Transglutaminase family, C-terminal ig like domain;
132-231 7.81e-30

Transglutaminase family, C-terminal ig like domain;


Pssm-ID: 460002  Cd Length: 106  Bit Score: 110.12  E-value: 7.81e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958763681 132 VAMRIRVGDGMSLGNDFDVFAHIGNDTSES-RECRLLLCARTVSYNGVLGPECGTEDINLTLDPYSENSIPLRILYEKY- 209
Cdd:pfam00927   1 PEMKIEVLGSAVVGQDLTVSVTLSNPLSEPlKDVVLSLSAQTVEYNGVLGAEFKKKSLELTLEPGEEKSVPIKITPSKYg 80
                          90       100
                  ....*....|....*....|....*.
gi 1958763681 210 -SGCLTE---SNLIKVRGLLVEPAAN 231
Cdd:pfam00927  81 pRQLLVEfssDALAKVKGYRNVLVAQ 106
Transglut_C pfam00927
Transglutaminase family, C-terminal ig like domain;
245-344 2.64e-23

Transglutaminase family, C-terminal ig like domain;


Pssm-ID: 460002  Cd Length: 106  Bit Score: 92.79  E-value: 2.64e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958763681 245 PEIKIRILGEPKQNRKLVAEVSLKNPLSDSLYDCVF-----TVEGAGLTK-EQKSVEVSDPVPAGDAVKVRVDLFPTDIG 318
Cdd:pfam00927   1 PEMKIEVLGSAVVGQDLTVSVTLSNPLSEPLKDVVLslsaqTVEYNGVLGaEFKKKSLELTLEPGEEKSVPIKITPSKYG 80
                          90       100
                  ....*....|....*....|....*.
gi 1958763681 319 LHKLVVNFQCDKLKSVKGYRNIIIGP 344
Cdd:pfam00927  81 PRQLLVEFSSDALAKVKGYRNVLVAQ 106
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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