|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
384-1128 |
1.43e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 89.35 E-value: 1.43e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 384 KNGIHQAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAI-ERRNEYN-LRKLDEEYKERIA 461
Cdd:TIGR02168 219 KAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVsELEEEIEeLQKELYALANEIS 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 462 ALKNELRQEREQiLQQVGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYEnltsKLQRSLENV 541
Cdd:TIGR02168 299 RLEQQKQILRER-LANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELE----AELEELESR 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 542 LAEKFGDLDPSSAEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPCQNALSEELDGHGDGIEQDQ 621
Cdd:TIGR02168 374 LEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQ 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 622 EpgsgecnplnmsiEAELVIEQLKEQHHRdlchlRLELEDKVRHYEKQLDH--TRVACEKEQVAMKQKYEQGMRTLEKQi 699
Cdd:TIGR02168 454 E-------------ELERLEEALEELREE-----LEEAEQALDAAERELAQlqARLDSLERLQENLEGFSEGVKALLKN- 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 700 selQSEIADLQGQAAvlkeahhkascrheeekkqlqmvfdeEKTQLQEELRLEHEQELKARLQQA----EESFRQEREGL 775
Cdd:TIGR02168 515 ---QSGLSGILGVLS--------------------------ELISVDEGYEAAIEAALGGRLQAVvvenLNAAKKAIAFL 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 776 AQAAA--WTEEKARSLTRDLEQSHQEQLLSLMEKHALEKEELRKELSEYHQ------------RELQEGRYESEKLQEEN 841
Cdd:TIGR02168 566 KQNELgrVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKalsyllggvlvvDDLDNALELAKKLRPGY 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 842 SILRNEITTLNEEDSIS------NLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELS 915
Cdd:TIGR02168 646 RIVTLDGDLVRPGGVITggsaktNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELS 725
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 916 QKNSQNKEELKTLNQRlAEMLCQKEDPGTCTSEKWEQENESLKEELDrykvQTSTLVSSLEAELSEVKLQTHIVEQENLL 995
Cdd:TIGR02168 726 RQISALRKDLARLEAE-VEQLEERIAQLSKELTELEAEIEELEERLE----EAEEELAEAEAEIEELEAQIEQLKEELKA 800
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 996 LKDELERLKQLHRcpDLSDFQQKMCSILSYNENLLKEKEVLSEELKSCADKLAES-SLLEHRIATIKEEREAWEEQSQDL 1074
Cdd:TIGR02168 801 LREALDELRAELT--LLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDiESLAAEIEELEELIEELESELEAL 878
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....
gi 1958782432 1075 KSQLALSQEKVQNLEDILKNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQ 1128
Cdd:TIGR02168 879 LNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLE 932
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
390-1153 |
2.95e-16 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 84.73 E-value: 2.95e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 390 AALASFKAEIRHLLERVDQVVREKEKLRSDLDkaEKLKSLMASEVDDHHAaiERRNEYNLRKLDEEYKERIAAlKNELRQ 469
Cdd:TIGR02169 163 AGVAEFDRKKEKALEELEEVEENIERLDLIID--EKRQQLERLRREREKA--ERYQALLKEKREYEGYELLKE-KEALER 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 470 EREQILQQVGKQRVELEQ---EIEKAKTEENYIRDRLA-LSLKENNRLENELLENAEKLAEYENLTSKLQRSLEnVLAEK 545
Cdd:TIGR02169 238 QKEAIERQLASLEEELEKlteEISELEKRLEEIEQLLEeLNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIA-EKERE 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 546 FGDLDPSSAEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPCQnALSEELDGHGDGIEQDQEPGS 625
Cdd:TIGR02169 317 LEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELE-EVDKEFAETRDELKDYREKLE 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 626 GECNPLNMSIEAELVIEQLKEQHHRDLCHLRLELED-KVRHYEKQLDHTRVACE--------KEQVAMKQKYEQGMRTLE 696
Cdd:TIGR02169 396 KLKREINELKRELDRLQEELQRLSEELADLNAAIAGiEAKINELEEEKEDKALEikkqewklEQLAADLSKYEQELYDLK 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 697 KQISELQSEIADLQGQAAVLkEAHHKASCRHEEEKKQLQMVFDE----------EKTQLQEELRLEHEQELKARLQ---- 762
Cdd:TIGR02169 476 EEYDRVEKELSKLQRELAEA-EAQARASEERVRGGRAVEEVLKAsiqgvhgtvaQLGSVGERYATAIEVAAGNRLNnvvv 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 763 -------QAEESFRQEREGLAQAAAWTeeKARSLTRDLEQSHQEQLLSL------------------------------- 804
Cdd:TIGR02169 555 eddavakEAIELLKRRKAGRATFLPLN--KMRDERRDLSILSEDGVIGFavdlvefdpkyepafkyvfgdtlvvedieaa 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 805 -----------MEKHALEKEELRKELSEYHQRELQEGRYESEKLQEensiLRNEITTLNEEDSISNLKLEELNGSQEELW 873
Cdd:TIGR02169 633 rrlmgkyrmvtLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQR----LRERLEGLKRELSSLQSELRRIENRLDELS 708
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 874 QKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMlcqkedpgTCTSEKWEQE 953
Cdd:TIGR02169 709 QELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEEL--------EEDLHKLEEA 780
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 954 NESLKEELDRYKVQTST-LVSSLEAELSEVKLQTHIVEQE--NLLLKDELERLKQLHRCPDLSDFQQKMCSILSYNENLL 1030
Cdd:TIGR02169 781 LNDLEARLSHSRIPEIQaELSKLEEEVSRIEARLREIEQKlnRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLN 860
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1031 KEKEVLSEELKSCADKLAEsslLEHRIATIKEEREAWEEQ--------------SQDLKSQLALSQEKVQNLEDILKNVN 1096
Cdd:TIGR02169 861 GKKEELEEELEELEAALRD---LESRLGDLKKERDELEAQlrelerkieeleaqIEKKRKRLSELKAKLEALEEELSEIE 937
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958782432 1097 LQMAQIES------DLQVTRQEKEALKQEVMSLHLQLQNAIDKdwVSETATHLSGLQGQQKRL 1153
Cdd:TIGR02169 938 DPKGEDEEipeeelSLEDVQAELQRVEEEIRALEPVNMLAIQE--YEEVLKRLDELKEKRAKL 998
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
397-1133 |
5.02e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 83.95 E-value: 5.02e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 397 AEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERrneynLRKLDEEYKERIaalknelrQEREQILQ 476
Cdd:TIGR02168 225 LELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEE-----LRLEVSELEEEI--------EELQKELY 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 477 QVGKQRVELEQEIEKakteenyIRDRLALSLKENNRLENELLENAEKLAEYENLTSKLQrslenvlaEKFGDLDPSSAEF 556
Cdd:TIGR02168 292 ALANEISRLEQQKQI-------LRERLANLERQLEELEAQLEELESKLDELAEELAELE--------EKLEELKEELESL 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 557 FLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLrlpcqNALSEELDGHGDGIEQDQEPGSGECNPLNMSIE 636
Cdd:TIGR02168 357 EAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASL-----NNEIERLEARLERLEDRRERLQQEIEELLKKLE 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 637 aelviEQLKEQHHRDLCHLRLELEDKVRHYEkqldhTRVACEKEQVAMKQKYEQGMRTLEKQISELQSEIADLQG-QAAV 715
Cdd:TIGR02168 432 -----EAELKELQAELEELEEELEELQEELE-----RLEEALEELREELEEAEQALDAAERELAQLQARLDSLERlQENL 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 716 LKEAHHKASCRHEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQA----EESFRQEREGLAQAAA--WTEEKARSL 789
Cdd:TIGR02168 502 EGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRLQAVvvenLNAAKKAIAFLKQNELgrVTFLPLDSI 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 790 TRDLEQSHQEQLLSLMEKHALEKEELRKELSEYHQ------------RELQEGRYESEKLQEENSILRNEITTLNEEDSI 857
Cdd:TIGR02168 582 KGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKalsyllggvlvvDDLDNALELAKKLRPGYRIVTLDGDLVRPGGVI 661
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 858 S------NLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLN-- 929
Cdd:TIGR02168 662 TggsaktNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEae 741
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 930 -QRLAEMLCQKEDPGTCTSEKWEQENESLKEELDRYKVQTSTLVsSLEAELSEVKLQTHIVEQENLLLKDELERLKQLHR 1008
Cdd:TIGR02168 742 vEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIE-ELEAQIEQLKEELKALREALDELRAELTLLNEEAA 820
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1009 --CPDLSDFQQKMCSILSYNENLLKEKEVLSEELKSCADKLAEsslLEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQ 1086
Cdd:TIGR02168 821 nlRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEE---LEELIEELESELEALLNERASLEEALALLRSELE 897
|
730 740 750 760
....*....|....*....|....*....|....*....|....*..
gi 1958782432 1087 NLEDILKNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQNAIDK 1133
Cdd:TIGR02168 898 ELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQER 944
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
403-1003 |
4.04e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 77.67 E-value: 4.04e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 403 LERVDQVVREKEK----LRSDLDKAEKLKSLMASEVD-DHHAAIERRNEYNLRKldEEYKERIAALKNELRQEREQI--- 474
Cdd:COG1196 188 LERLEDILGELERqlepLERQAEKAERYRELKEELKElEAELLLLKLRELEAEL--EELEAELEELEAELEELEAELael 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 475 ---LQQVGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLENV---LAEKFGD 548
Cdd:COG1196 266 eaeLEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELeeeLEELEEE 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 549 LDPSSAEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLpcQNALSEELDGHGDGIEQDQEpgsgec 628
Cdd:COG1196 346 LEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAE--LAAQLEELEEAEEALLERLE------ 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 629 nplnmSIEAELVIEQLKEQHHRDLCHLRLELEDKVRHYEKQLDHTRVACEKEQVAMKQKYEQGMRTLEKQISELQSEIAD 708
Cdd:COG1196 418 -----RLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAAR 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 709 LQGQAAVLKEAHHK-ASCRHEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKAR 787
Cdd:COG1196 493 LLLLLEAEADYEGFlEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAG 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 788 SLTRdLEQSHQEQLLSLMEKHALEKEELRKELSEYHQRELQEGRYESEKLQEENSIL-------RNEITTLNEEDSISNL 860
Cdd:COG1196 573 RATF-LPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVaarleaaLRRAVTLAGRLREVTL 651
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 861 KLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKE 940
Cdd:COG1196 652 EGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLE 731
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958782432 941 dpgtctsekwEQENESLKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEqenllLKDELERL 1003
Cdd:COG1196 732 ----------AEREELLEELLEEEELLEEEALEELPEPPDLEELERELER-----LEREIEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
345-941 |
5.12e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 77.28 E-value: 5.12e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 345 QEEGIENSQEILKALDFSLDGNINLTELTLALENELLVTKNG---IHQAALASFKAEIRHLLERVDQVVREKEKLRSDLD 421
Cdd:COG1196 247 ELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAeeyELLAELARLEQDIARLEERRRELEERLEELEEELA 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 422 KAEKLKSLMASEVDDHHAAIERRNEyNLRKLDEEYKERIAALKNELRQEREQILQQVG--KQRVELEQEIEKAKTEENYI 499
Cdd:COG1196 327 ELEEELEELEEELEELEEELEEAEE-ELEEAEAELAEAEEALLEAEAELAEAEEELEElaEELLEALRAAAELAAQLEEL 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 500 RDRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLENVLAEKfgdldpssAEFFLQEERLAQMRNEYEQQCRLLQD 579
Cdd:COG1196 406 EEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEE--------AELEEEEEALLELLAELLEEAALLEA 477
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 580 QVDELQSELEEYQAQGRVLrlpcQNALSEELDGHGDGIEQDQEPGSGEcnplnmsIEAELVIEQLKEQHHRDLCHLRLEl 659
Cdd:COG1196 478 ALAELLEELAEAAARLLLL----LEAEADYEGFLEGVKAALLLAGLRG-------LAGAVAVLIGVEAAYEAALEAALA- 545
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 660 edkVRHYEKQLDHTRVAceKEQVAMKQKYEQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKASCRHEEEKKQLQMVFD 739
Cdd:COG1196 546 ---AALQNIVVEDDEVA--AAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGD 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 740 EEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQSHQEQLLSLMEKHALEKEELRKEL 819
Cdd:COG1196 621 TLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALL 700
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 820 SEYHQRELQEGRyeSEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSD 899
Cdd:COG1196 701 AEEEEERELAEA--EEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 1958782432 900 LKLKNqqLDSEnkelsqknsqnkEELKTLNQRLAEMLCQKED 941
Cdd:COG1196 779 LGPVN--LLAI------------EEYEELEERYDFLSEQRED 806
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
433-1291 |
2.36e-13 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 75.54 E-value: 2.36e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 433 EVDDHHAAIERRNEYNLRKLDEEYKERIAALK------NELRQEREQILQQVGKQRVELEQEIEKAKTEENYIRDRLALS 506
Cdd:pfam15921 60 ELDSPRKIIAYPGKEHIERVLEEYSHQVKDLQrrlnesNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQS 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 507 LKE-NNRLENEL--LENAEKLAE--YENLTSKLQR------SLENVLAEKFG---DLDPSSAEFFLQEERLAQMR----- 567
Cdd:pfam15921 140 QEDlRNQLQNTVheLEAAKCLKEdmLEDSNTQIEQlrkmmlSHEGVLQEIRSilvDFEEASGKKIYEHDSMSTMHfrslg 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 568 NEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPCQNALSEELDGHGDGIEQ------------DQEPGSGECNPLNMSI 635
Cdd:pfam15921 220 SAISKILRELDTEISYLKGRIFPVEDQLEALKSESQNKIELLLQQHQDRIEQliseheveitglTEKASSARSQANSIQS 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 636 EAELVIEQLKEQHHRDLCH----------LRLELEDKVRHYEKQLDHTrvacEKEQVAMKQKYEQGmRTLEKQISElqsE 705
Cdd:pfam15921 300 QLEIIQEQARNQNSMYMRQlsdlestvsqLRSELREAKRMYEDKIEEL----EKQLVLANSELTEA-RTERDQFSQ---E 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 706 IADLQGQAAVLKEAHHKASCRHEEEKKQLQMVFDEEK------TQLQEEL--RLEHEQELKARLQ--QAEESFRQEREGL 775
Cdd:pfam15921 372 SGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTgnsitiDHLRRELddRNMEVQRLEALLKamKSECQGQMERQMA 451
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 776 A-QAAAWTEEKARSLTRDLEqSHQEQLLSLME-----KHALEKEE-----LRKELSEyHQRELQEGRYESEKLQEENSIL 844
Cdd:pfam15921 452 AiQGKNESLEKVSSLTAQLE-STKEMLRKVVEeltakKMTLESSErtvsdLTASLQE-KERAIEATNAEITKLRSRVDLK 529
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 845 RNEITTL-NEEDSISN---------LKLEELNGSQEELWQKIETIEQ--------------EKASIQKMVEKLKKQVSDL 900
Cdd:pfam15921 530 LQELQHLkNEGDHLRNvqtecealkLQMAEKDKVIEILRQQIENMTQlvgqhgrtagamqvEKAQLEKEINDRRLELQEF 609
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 901 KLKNQQLDSENKELSQKNSQNK-EELKTLN---QRLAEMLCQKEDPGTCTSEKWEQENE--SLKEELDRYKVQTSTLVSS 974
Cdd:pfam15921 610 KILKDKKDAKIRELEARVSDLElEKVKLVNagsERLRAVKDIKQERDQLLNEVKTSRNElnSLSEDYEVLKRNFRNKSEE 689
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 975 LEAELSEVKLQTHIVEQENLLLKDELERLKQLH-RCPDLSDFQQKMCSILSYNENLLKEKEVLSEELKSCADK-----LA 1048
Cdd:pfam15921 690 METTTNKLKMQLKSAQSELEQTRNTLKSMEGSDgHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKekhflKE 769
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1049 ESSLLEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDLQvtRQEKEalkqevmSLHLQLQ 1128
Cdd:pfam15921 770 EKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQ--RQEQE-------SVRLKLQ 840
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1129 NAIDkdwvsetathLSGLQGQQKRLSWNKLDHLMseEPELLCQESKRLQTvVQNTQADLTHSREKIRQLESNllPTKHQK 1208
Cdd:pfam15921 841 HTLD----------VKELQGPGYTSNSSMKPRLL--QPASFTRTHSNVPS-SQSTASFLSHHSRKTNALKED--PTRDLK 905
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1209 QLNQSCTVKPIEQEKLALKRECEQSRKERSPTSRKVSQMSSLEREL--ETIHLENEGLKKKQVRLDEKLM-EMQPLRSAG 1285
Cdd:pfam15921 906 QLLQELRSVINEEPTVQLSKAEDKGRAPSLGALDDRVRDCIIESSLrsDICHSSSNSLQTEGSKSSETCSrEPVLLHAGE 985
|
....*.
gi 1958782432 1286 THSPSS 1291
Cdd:pfam15921 986 LEDPSS 991
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
374-935 |
2.75e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 74.97 E-value: 2.75e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 374 LALENELLVTKNGIHQAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRN--EYNLRK 451
Cdd:COG1196 216 RELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQaeEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 452 LDEEYKERIAALKnELRQEREQILQQVGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLT 531
Cdd:COG1196 296 ELARLEQDIARLE-ERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAEL 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 532 SKLQRSLENVLAEKFGDLDpssaefflQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPCQNALSEELD 611
Cdd:COG1196 375 AEAEEELEELAEELLEALR--------AAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEE 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 612 GHGDGIEQDQEpgsgecnpLNMSIEAELVIEQLKEQHHRDLCHLRLELEDKVRHYEKQLDHTRVACEKEQVAMKQKYEQG 691
Cdd:COG1196 447 AAEEEAELEEE--------EEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAG 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 692 MRTLEKQISELQS-EIADLQGQAAVLKEAHHKASCRHEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQ 770
Cdd:COG1196 519 LRGLAGAVAVLIGvEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIG 598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 771 E-REGLAQAAAWTEEKAR-----SLTRDLEQSHQEQLLSLMEKHALEKEELRKELSEYHQRELQEGRYESEKLQEEnSIL 844
Cdd:COG1196 599 AaVDLVASDLREADARYYvlgdtLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAAL-LEA 677
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 845 RNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKN------ 918
Cdd:COG1196 678 EAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEaleelp 757
|
570 580
....*....|....*....|..
gi 1958782432 919 -----SQNKEELKTLNQRLAEM 935
Cdd:COG1196 758 eppdlEELERELERLEREIEAL 779
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
561-1382 |
4.82e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 74.32 E-value: 4.82e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 561 ERLAQMRNEYEQQCRLLQDQVD------ELQSELEEYQAQGRVLRLpcqnalsEELDGHGDGIEQDQEPGSGECNPLNMS 634
Cdd:TIGR02168 189 DRLEDILNELERQLKSLERQAEkaerykELKAELRELELALLVLRL-------EELREELEELQEELKEAEEELEELTAE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 635 I-EAELVIEQLKEQHHrdlchlrlELEDKVRHYEKQL-DHTRVACEKEQvaMKQKYEQGMRTLEKQISELQSEIADLQGQ 712
Cdd:TIGR02168 262 LqELEEKLEELRLEVS--------ELEEEIEELQKELyALANEISRLEQ--QKQILRERLANLERQLEELEAQLEELESK 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 713 AAVLKEAHHKAscrhEEEKKQLQMVFDEEKTQLQEELRLEheQELKARLQQAEESFRQEREGLAQAaawtEEKARSLTRD 792
Cdd:TIGR02168 332 LDELAEELAEL----EEKLEELKEELESLEAELEELEAEL--EELESRLEELEEQLETLRSKVAQL----ELQIASLNNE 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 793 LEQ--SHQEQLLSLMEKHALEKEELRKELSEY----HQRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELN 866
Cdd:TIGR02168 402 IERleARLERLEDRRERLQQEIEELLKKLEEAelkeLQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAE 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 867 GSQEELWQKIETIEqekaSIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLcqkEDPGTCT 946
Cdd:TIGR02168 482 RELAQLQARLDSLE----RLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRL---QAVVVEN 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 947 SEKWEQENESLKE---------ELDRYKVQT--STLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQLHRCPDLSDF 1015
Cdd:TIGR02168 555 LNAAKKAIAFLKQnelgrvtflPLDSIKGTEiqGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNA 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1016 QQkMCSILSYNENL--LKEKEVLSEELKSCADKLAESSLLEHR--IATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDI 1091
Cdd:TIGR02168 635 LE-LAKKLRPGYRIvtLDGDLVRPGGVITGGSAKTNSSILERRreIEELEEKIEELEEKIAELEKALAELRKELEELEEE 713
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1092 LKNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQNAidkdwvsetatHLSGLQGQQKRLSWNKLDHLMSEEPELLCQ 1171
Cdd:TIGR02168 714 LEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQL-----------SKELTELEAEIEELEERLEEAEEELAEAEA 782
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1172 ESKRLQTVVQNTQADLTHSREKIRQLESNLLPTKhQKQLNQSCTVKPIEQEKLALKRECEQSRKERSPTSRKVS----QM 1247
Cdd:TIGR02168 783 EIEELEAQIEQLKEELKALREALDELRAELTLLN-EEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIEslaaEI 861
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1248 SSLERELETIHLENEGLKKKQVRLDEKLME--------MQPLRSAGTHSPSSHWDLQLLqqqacpmvpREQFLQLQQQLL 1319
Cdd:TIGR02168 862 EELEELIEELESELEALLNERASLEEALALlrseleelSEELRELESKRSELRRELEEL---------REKLAQLELRLE 932
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958782432 1320 QAEKRSQHLQEELDNRtsepntvqgsqehlVNLMEERMIEVEQKLKLVKRLLQEKVNQLKEQL 1382
Cdd:TIGR02168 933 GLEVRIDNLQERLSEE--------------YSLTLEEAEALENKIEDDEEEARRRLKRLENKI 981
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
389-992 |
1.04e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 73.18 E-value: 1.04e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 389 QAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEyNLRKLDEEYKERIAALkNELR 468
Cdd:TIGR02169 293 KEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERK-RRDKLTEEYAELKEEL-EDLR 370
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 469 QEREQILQQVGKQRVEL---EQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLENV---L 542
Cdd:TIGR02169 371 AELEEVDKEFAETRDELkdyREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKaleI 450
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 543 AEKFGDLDPSSAEFFLQEERLAQMRNEYEQqcrlLQDQVDELQSELEEYQAQGRVLR--LPCQNALSEELDGHGDGI--- 617
Cdd:TIGR02169 451 KKQEWKLEQLAADLSKYEQELYDLKEEYDR----VEKELSKLQRELAEAEAQARASEerVRGGRAVEEVLKASIQGVhgt 526
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 618 --------EQDQEP----GSGECNplNMSIEAELV----IEQLKE---------------QHHRDLCHLRL--------- 657
Cdd:TIGR02169 527 vaqlgsvgERYATAievaAGNRLN--NVVVEDDAVakeaIELLKRrkagratflplnkmrDERRDLSILSEdgvigfavd 604
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 658 --ELEDKVR---------------------------------------------HYEKQLDHTRVACEKEQVAMKQKYEQ 690
Cdd:TIGR02169 605 lvEFDPKYEpafkyvfgdtlvvedieaarrlmgkyrmvtlegelfeksgamtggSRAPRGGILFSRSEPAELQRLRERLE 684
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 691 GMrtlEKQISELQSEIADLQGQAAVLKEAHHKASCRHEEEKKQLQMVFDEEKTQLQeelRLEHEQELKARLQQAEESFRQ 770
Cdd:TIGR02169 685 GL---KRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKE---RLEELEEDLSSLEQEIENVKS 758
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 771 EREGLAQAAAWTEEKARSLTRDLEQSHQEQLLSLMEKHALEKEELRKELSEYHQReLQEGRYESEKLQEENSILRNEITT 850
Cdd:TIGR02169 759 ELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEAR-LREIEQKLNRLTLEKEYLEKEIQE 837
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 851 LNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQ 930
Cdd:TIGR02169 838 LQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRK 917
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1958782432 931 RLAEMLCQKedpgtctsekweqenESLKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQE 992
Cdd:TIGR02169 918 RLSELKAKL---------------EALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVE 964
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
784-1094 |
3.50e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 71.51 E-value: 3.50e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 784 EKARSLTRDLEQSHQEQLLSLMEKHALEKEELRKELSEyHQRELQEGRYESEKLQEENSILRNEITTLNEEdsisnlkLE 863
Cdd:COG1196 213 ERYRELKEELKELEAELLLLKLRELEAELEELEAELEE-LEAELEELEAELAELEAELEELRLELEELELE-------LE 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 864 ELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKEDpg 943
Cdd:COG1196 285 EAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAE-- 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 944 tcTSEKWEQENESLKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQLHRCPDlsdfqqkmcSIL 1023
Cdd:COG1196 363 --AEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEE---------ALA 431
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958782432 1024 SYNENLLKEKEVLSEELKSCADKLAESSLLEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKN 1094
Cdd:COG1196 432 ELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEAD 502
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
388-1013 |
3.83e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 71.24 E-value: 3.83e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 388 HQAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIER-RNEYN-LRKLDEEYKERIAALKN 465
Cdd:TIGR02168 293 LANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEElKEELEsLEAELEELEAELEELES 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 466 ELRQEREQILQQVGKqRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTsklqrslenvLAEK 545
Cdd:TIGR02168 373 RLEELEEQLETLRSK-VAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKE----------LQAE 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 546 FGDLDPSSAEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLrlpcqNALSEELDGHGDGI---EQDQE 622
Cdd:TIGR02168 442 LEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSL-----ERLQENLEGFSEGVkalLKNQS 516
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 623 PGSGECNPLNMSIEAE-----------------LVIEQLkEQHHRDLCHLRLELEDKVRHYE-KQLDHTRVACEKEQVAM 684
Cdd:TIGR02168 517 GLSGILGVLSELISVDegyeaaieaalggrlqaVVVENL-NAAKKAIAFLKQNELGRVTFLPlDSIKGTEIQGNDREILK 595
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 685 KQKYEQG-MRTLEKQISELQSEIADLQGQAAV---LKEAHHKASCRHEEE---------------------KKQLQMVF- 738
Cdd:TIGR02168 596 NIEGFLGvAKDLVKFDPKLRKALSYLLGGVLVvddLDNALELAKKLRPGYrivtldgdlvrpggvitggsaKTNSSILEr 675
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 739 DEEKTQLQEELRL--EHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQ-----SHQEQLLSLMEKHALE 811
Cdd:TIGR02168 676 RREIEELEEKIEEleEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDlarleAEVEQLEERIAQLSKE 755
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 812 KEELRKELSEYHQR------ELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKAS 885
Cdd:TIGR02168 756 LTELEAEIEELEERleeaeeELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAA 835
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 886 IQKMVEKLKKQVSDLKLK----NQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKEDPGTCTSEkwEQENESLKEEL 961
Cdd:TIGR02168 836 TERRLEDLEEQIEELSEDieslAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEE--LRELESKRSEL 913
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|...
gi 1958782432 962 DRYKVQTSTLVSSLEAELSEVKLQ-THIVEQENLLLKDELERLKQLHRCPDLS 1013
Cdd:TIGR02168 914 RRELEELREKLAQLELRLEGLEVRiDNLQERLSEEYSLTLEEAEALENKIEDD 966
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
480-1277 |
4.42e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 71.24 E-value: 4.42e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 480 KQRVELEQEIEKakTEENYirDRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLENVLAEKFGDLDPSSAEFFLQ 559
Cdd:TIGR02168 172 ERRKETERKLER--TRENL--DRLEDILNELERQLKSLERQAEKAERYKELKAELRELELALLVLRLEELREELEELQEE 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 560 EERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQgrvlrlpcQNALSEELDGHGDGIEqdqepgsgecnplnmsiEAEL 639
Cdd:TIGR02168 248 LKEAEEELEELTAELQELEEKLEELRLEVSELEEE--------IEELQKELYALANEIS-----------------RLEQ 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 640 VIEQLKEQHHRdlchlrleLEDKVRHYEKQLDHTRvacekeqvAMKQKYEQGMRTLEKQISELQSEIADLQGQAAVLKEA 719
Cdd:TIGR02168 303 QKQILRERLAN--------LERQLEELEAQLEELE--------SKLDELAEELAELEEKLEELKEELESLEAELEELEAE 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 720 HHKASCRHEEEKKQLQM----VFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQ 795
Cdd:TIGR02168 367 LEELESRLEELEEQLETlrskVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELE 446
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 796 SHQEQLLSLMEKHALEKEELRKELSEYHQRELQEGRYESEKLQEENSI--LRNEITTLNEEDSISNLKLEELNGSQEELW 873
Cdd:TIGR02168 447 EELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLerLQENLEGFSEGVKALLKNQSGLSGILGVLS 526
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 874 QKIETIEQ-EKA-------SIQKMV----EKLKKQVSDLKLKNQQ------LDSENKELSQKNSQNKEELKTLNQRLAEM 935
Cdd:TIGR02168 527 ELISVDEGyEAAieaalggRLQAVVvenlNAAKKAIAFLKQNELGrvtflpLDSIKGTEIQGNDREILKNIEGFLGVAKD 606
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 936 LCQKEDP----------GTCTSEKWEQENESLKEELDRYK-------------------VQTSTLVSSLEAELSEVKLQT 986
Cdd:TIGR02168 607 LVKFDPKlrkalsyllgGVLVVDDLDNALELAKKLRPGYRivtldgdlvrpggvitggsAKTNSSILERRREIEELEEKI 686
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 987 HIVEQENLLLKDELERLKQLhrcpdlsdfQQKMCSILSYNENLLKEKEVLSEELKSCADKL-AESSLLEHRIATIKEERE 1065
Cdd:TIGR02168 687 EELEEKIAELEKALAELRKE---------LEELEEELEQLRKELEELSRQISALRKDLARLeAEVEQLEERIAQLSKELT 757
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1066 AWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQNAidkdwvsetathLSG 1145
Cdd:TIGR02168 758 ELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANL------------RER 825
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1146 LQGQQKRLswnkldHLMSEEPELLCQESKRLQTVVQNTQADLTHSREKIRQLESNLlpTKHQKQLNQsctvkpIEQEKLA 1225
Cdd:TIGR02168 826 LESLERRI------AATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESEL--EALLNERAS------LEEALAL 891
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*.
gi 1958782432 1226 LKRECEQSRKERSPTSRKVS----QMSSLERELETIHLENEGLKKKQVRLDEKLME 1277
Cdd:TIGR02168 892 LRSELEELSEELRELESKRSelrrELEELREKLAQLELRLEGLEVRIDNLQERLSE 947
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
455-1123 |
7.57e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 70.35 E-value: 7.57e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 455 EYKERIAALKNELRQEREQ------ILQQVGKQRVELEQEIEKAKTeenyirdrlALSLKEnnrlENELLENAEKLAEYE 528
Cdd:COG1196 169 KYKERKEEAERKLEATEENlerledILGELERQLEPLERQAEKAER---------YRELKE----ELKELEAELLLLKLR 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 529 NLTSKLQRSLENVLAEKfgdldpssaeffLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQgrvlrlpcQNALSE 608
Cdd:COG1196 236 ELEAELEELEAELEELE------------AELEELEAELAELEAELEELRLELEELELELEEAQAE--------EYELLA 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 609 ELDGHGDGIEQDQEpgsgecnplnMSIEAELVIEQLKEQhhrdlchlRLELEDKVRHYEKQLDHTRVACEKEQVAMKQKy 688
Cdd:COG1196 296 ELARLEQDIARLEE----------RRRELEERLEELEEE--------LAELEEELEELEEELEELEEELEEAEEELEEA- 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 689 EQGMRTLEKQISELQSEIADLQgqaavlkeahhkascrhEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESF 768
Cdd:COG1196 357 EAELAEAEEALLEAEAELAEAE-----------------EELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERL 419
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 769 RQEREGLAQAAAwTEEKARSLTRDLEQSHQEQLLSLMEKHALEKEELRKELSEYHQRELQEGRYESEKLQEENSILRNEI 848
Cdd:COG1196 420 EEELEELEEALA-ELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLE 498
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 849 TTLNEEDSISNLKLEELNGSQEELWQKI-ETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKT 927
Cdd:COG1196 499 AEADYEGFLEGVKAALLLAGLRGLAGAVaVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLP 578
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 928 LNQRLAEMLCQKEDPGTCTSEKWEQENESLKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQLH 1007
Cdd:COG1196 579 LDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSA 658
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1008 RcPDLSDFQ--QKMCSILSYNENLLKEKEVLSEELKSCADKLAESSLLEHRIATIKEEREAWEEQSQDLKSQLALSQEKV 1085
Cdd:COG1196 659 G-GSLTGGSrrELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREEL 737
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 1958782432 1086 QNLEDILKNVNLQMAQIES----DLQVTRQEKEALKQEVMSL 1123
Cdd:COG1196 738 LEELLEEEELLEEEALEELpeppDLEELERELERLEREIEAL 779
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
411-1127 |
2.41e-11 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 68.84 E-value: 2.41e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 411 REKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNeynlrKLDEEYkERIAALKNELRQEREQILQQVGKQRVELEQEIE 490
Cdd:TIGR00618 163 KEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAE-----LLTLRS-QLLTLCTPCMPDTYHERKQVLEKELKHLREALQ 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 491 KAKTEENYIRdRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLENVlaekfgDLDPSSAEFFLQEERLAQMRNEY 570
Cdd:TIGR00618 237 QTQQSHAYLT-QKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERI------NRARKAAPLAAHIKAVTQIEQQA 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 571 EQQCRLLQDQVDELQSELEEYQaqgrvlrlpcqNALSEELDGHGDgiEQDQEPGSGECNPLNMSIEAELVIEQLKEQHHR 650
Cdd:TIGR00618 310 QRIHTELQSKMRSRAKLLMKRA-----------AHVKQQSSIEEQ--RRLLQTLHSQEIHIRDAHEVATSIREISCQQHT 376
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 651 DLCHLRLELEDKvrhyekqldhtRVACEKEQVAMKQKYEqgMRTLEKQISELQSEIADLQGQAAVLKeahhkASCRHEEE 730
Cdd:TIGR00618 377 LTQHIHTLQQQK-----------TTLTQKLQSLCKELDI--LQREQATIDTRTSAFRDLQGQLAHAK-----KQQELQQR 438
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 731 KKQLQMVFDEEKTQLQEeLRLEHEQELKARLQQAEESFRQEREGLAQaaaWTEEKARSLTRDLEQSHQEQLLSLMEKHaL 810
Cdd:TIGR00618 439 YAELCAAAITCTAQCEK-LEKIHLQESAQSLKEREQQLQTKEQIHLQ---ETRKKAVVLARLLELQEEPCPLCGSCIH-P 513
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 811 EKEELRKELSEYHQRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMV 890
Cdd:TIGR00618 514 NPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNIT 593
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 891 EKLKKQV-SDLKLKNQQLDSENKELSQKN-SQNKEELKTLNQRLAEMLCQKEDPGTCTSEKWEQENE-----SLKEELDR 963
Cdd:TIGR00618 594 VRLQDLTeKLSEAEDMLACEQHALLRKLQpEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVrehalSIRVLPKE 673
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 964 YKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQLHR-----CPDLSDFQQKMCSILSYNENLLKEKEVLSE 1038
Cdd:TIGR00618 674 LLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDRefneiENASSSLGSDLAAREDALNQSLKELMHQAR 753
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1039 E-LKSCADKLAESSL-----------LEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDL 1106
Cdd:TIGR00618 754 TvLKARTEAHFNNNEevtaalqtgaeLSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQF 833
|
730 740
....*....|....*....|.
gi 1958782432 1107 QVTRQEKEALKQEVMSLHLQL 1127
Cdd:TIGR00618 834 LSRLEEKSATLGEITHQLLKY 854
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
457-1005 |
8.78e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 66.63 E-value: 8.78e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 457 KERIAALKNELRQEREQILQQVGKQRVELEQ------EIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENL 530
Cdd:PRK03918 188 TENIEELIKEKEKELEEVLREINEISSELPElreeleKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEER 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 531 TSKLQRSLEnVLAEKFGDLdPSSAEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAqgRVLRLPCQNALSEEL 610
Cdd:PRK03918 268 IEELKKEIE-ELEEKVKEL-KELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEE--RIKELEEKEERLEEL 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 611 DGHGDGIEQDQEPGSGECNPLNMSIEAELVIEQLKEqhhRDLCHLRLELEDKVRHYEKQldhtrvacekeqvamKQKYEQ 690
Cdd:PRK03918 344 KKKLKELEKRLEELEERHELYEEAKAKKEELERLKK---RLTGLTPEKLEKELEELEKA---------------KEEIEE 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 691 GMRTLEKQISELQSEIADLQGQAAVLKEAHHKAS-CRH---EEEKKQLQMVFDEEKTQLQEELR--LEHEQELKARLQQA 764
Cdd:PRK03918 406 EISKITARIGELKKEIKELKKAIEELKKAKGKCPvCGReltEEHRKELLEEYTAELKRIEKELKeiEEKERKLRKELREL 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 765 EESFRQEREglaqaaawteekarsltrdleqshqeqlLSLMEKHALEKEELRKELSEYHQRELQEGRYESEKLQEENSIL 844
Cdd:PRK03918 486 EKVLKKESE----------------------------LIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKL 537
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 845 RNEITTLNEEDSisnlKLEELNGSQEELWQKIETIEQEKASIQKMVEKLK-KQVSDLKLKNQQLDSENKE-LSQKNS-QN 921
Cdd:PRK03918 538 KGEIKSLKKELE----KLEELKKKLAELEKKLDELEEELAELLKELEELGfESVEELEERLKELEPFYNEyLELKDAeKE 613
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 922 KEELKTLNQRLAEMLCQKEDPGTCTSEKWEQENESLKEELDRYKVQT-----------STLVSSLEAELSEVKLQTHIVE 990
Cdd:PRK03918 614 LEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEyeelreeylelSRELAGLRAELEELEKRREEIK 693
|
570
....*....|....*
gi 1958782432 991 QENLLLKDELERLKQ 1005
Cdd:PRK03918 694 KTLEKLKEELEEREK 708
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
748-1440 |
1.42e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 63.15 E-value: 1.42e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 748 ELRLEHEQELKARLQQAEESFRQEREGLaQAAAWTEEKARSLTRDLEQSHQEQLLSLMEKHALEKEELRKELSEYhQREL 827
Cdd:TIGR02168 178 ERKLERTRENLDRLEDILNELERQLKSL-ERQAEKAERYKELKAELRELELALLVLRLEELREELEELQEELKEA-EEEL 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 828 QEGRYESEKLQEENSILRNEITTLNEEdsisnlkLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQL 907
Cdd:TIGR02168 256 EELTAELQELEEKLEELRLEVSELEEE-------IEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEEL 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 908 DSENKELSQKNSQNKEELKTLNQRLAEMLcQKEDPGTCTSEKWEQENESLKEELDRYK---VQTSTLVSSLEAELSEVKL 984
Cdd:TIGR02168 329 ESKLDELAEELAELEEKLEELKEELESLE-AELEELEAELEELESRLEELEEQLETLRskvAQLELQIASLNNEIERLEA 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 985 QTHIVEQENLLLKDELERLKQLHRCPDLSDFQQKMCSILSYNENLLKEKEVLSEELKScadklaesslLEHRIATIKEER 1064
Cdd:TIGR02168 408 RLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEE----------LREELEEAEQAL 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1065 EAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIE---------SDLQVTRQEKEALKQEVMSLHLQLQNAIDKDW 1135
Cdd:TIGR02168 478 DAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSglsgilgvlSELISVDEGYEAAIEAALGGRLQAVVVENLNA 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1136 VSETATHLSglQGQQKRLSWNKLDHLMSEEPELLCQESKRLQTVVQNTQADLTHSREKIRQLESNLLPTKH-----QKQL 1210
Cdd:TIGR02168 558 AKKAIAFLK--QNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLvvddlDNAL 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1211 NQSctvKPIEQEKLALKRECEQSRKERSPTSRKVSQMSS-LERELETIHLENEgLKKKQVRLDEKLMEMQPLRSAGTHSP 1289
Cdd:TIGR02168 636 ELA---KKLRPGYRIVTLDGDLVRPGGVITGGSAKTNSSiLERRREIEELEEK-IEELEEKIAELEKALAELRKELEELE 711
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1290 SSHWDLQLLQQQAcpmvpREQFLQLQQQLLQAEKRSQHLQEELDNRTSEPNTVQGSQEHLvnlmEERMIEVEQKLKLVKR 1369
Cdd:TIGR02168 712 EELEQLRKELEEL-----SRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEEL----EERLEEAEEELAEAEA 782
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958782432 1370 ---LLQEKVNQLKEQLCKNSKT----DAMVKDLYVENAQLLKALEMTEQRQKTAEKKNFLLEEKIASLSTIVRNLAPA 1440
Cdd:TIGR02168 783 eieELEAQIEQLKEELKALREAldelRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAE 860
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
846-1278 |
9.75e-09 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 60.03 E-value: 9.75e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 846 NEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKL----------KNQQLDSENKELS 915
Cdd:TIGR04523 145 TEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELllsnlkkkiqKNKSLESQISELK 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 916 QKNSQNKEELKTLNQRLAEM---LCQKEDPGTCTSEKWEQENESLKEELDRYKvQTSTLVSSLEAELSEVKLQTHIVEQE 992
Cdd:TIGR04523 225 KQNNQLKDNIEKKQQEINEKtteISNTQTQLNQLKDEQNKIKKQLSEKQKELE-QNNKKIKELEKQLNQLKSEISDLNNQ 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 993 -----NLLLKDELERLKQLHRC--PDLSDFQQKMCSILSYNENLLKEKEVLSEELKSCADKLAESsllEHRIATIKEERE 1065
Cdd:TIGR04523 304 keqdwNKELKSELKNQEKKLEEiqNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEK---QNEIEKLKKENQ 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1066 AWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQNAIDKDWVsetathlsg 1145
Cdd:TIGR04523 381 SYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSV--------- 451
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1146 lqgqqKRLSWNKLDHLMSEEP---ELLCQESKRLQTVVQNTQADLTHSREKIRQLesnllpTKHQKQLNQscTVKPIEQE 1222
Cdd:TIGR04523 452 -----KELIIKNLDNTRESLEtqlKVLSRSINKIKQNLEQKQKELKSKEKELKKL------NEEKKELEE--KVKDLTKK 518
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1958782432 1223 KLALKRECEQSRKERsptSRKVSQMSSLERELETIH--LENEGLKKKQVRLDEKLMEM 1278
Cdd:TIGR04523 519 ISSLKEKIEKLESEK---KEKESKISDLEDELNKDDfeLKKENLEKEIDEKNKEIEEL 573
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
391-853 |
1.16e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 60.05 E-value: 1.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 391 ALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEYNLR-----KLDEEYKERIAALKN 465
Cdd:PRK02224 238 EADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDllaeaGLDDADAEAVEARRE 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 466 ELRQEREQILQQVGKQRV---ELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLENvL 542
Cdd:PRK02224 318 ELEDRDEELRDRLEECRVaaqAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEE-L 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 543 AEKFGDL--DPSSAEFFLQE-----ERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQgrvlrlPCQNALSEEldGHGD 615
Cdd:PRK02224 397 RERFGDApvDLGNAEDFLEElreerDELREREAELEATLRTARERVEEAEALLEAGKCP------ECGQPVEGS--PHVE 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 616 GIEQDQEPGSgecnplnmSIEAELviEQLKEQhhRDLCHLRLELEDKVRHYEKQLDHTRvacEKEQVAMKQKYEQGMRTL 695
Cdd:PRK02224 469 TIEEDRERVE--------ELEAEL--EDLEEE--VEEVEERLERAEDLVEAEDRIERLE---ERREDLEELIAERRETIE 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 696 EK--QISELQSEIADLQGQAAVLKEAHHKASCRHEEEKKQLQmVFDEEKTQLQEEL----RLEHEQELKARLQQAEESFR 769
Cdd:PRK02224 534 EKreRAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVA-ELNSKLAELKERIesleRIRTLLAAIADAEDEIERLR 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 770 QEREGLAQAAAWTEEK---ARSLTRDLEQSHQEQLLSlmekhalEKEELRKELSEYHQR---ELQEGRYESEKLQEENSI 843
Cdd:PRK02224 613 EKREALAELNDERRERlaeKRERKRELEAEFDEARIE-------EAREDKERAEEYLEQveeKLDELREERDDLQAEIGA 685
|
490
....*....|
gi 1958782432 844 LRNEITTLNE 853
Cdd:PRK02224 686 VENELEELEE 695
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
426-1041 |
1.33e-08 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 59.85 E-value: 1.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 426 LKSLMASEVDDHHAAIERRNEYN--LRKLDEEYKERIAALKNEL-------RQEREQILQQVGKQRVELEQEIEKAKTEE 496
Cdd:pfam12128 267 YKSDETLIASRQEERQETSAELNqlLRTLDDQWKEKRDELNGELsaadaavAKDRSELEALEDQHGAFLDADIETAAADQ 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 497 NYIrDRLALSLKENNRLENELLENAEKL-AEYENLTSKLQRSLENVLAEKFGDLDPSSAEFFLQeerLAQMRNEYEQQCR 575
Cdd:pfam12128 347 EQL-PSWQSELENLEERLKALTGKHQDVtAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQ---LAVAEDDLQALES 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 576 LLQDQVDELQSELEEyQAQGRVLRLpcqnalsEELDGHGDGIEQDQEpgsgecNPLNMSIEAELVIEQLKEQHHRDLCHL 655
Cdd:pfam12128 423 ELREQLEAGKLEFNE-EEYRLKSRL-------GELKLRLNQATATPE------LLLQLENFDERIERAREEQEAANAEVE 488
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 656 RLELEDKV--RHYEKQLDHTRVaCEKEQVAMKQKYEQGMRTLEKQISELqseIADLQGQAAVLKEAHHKASCRHEEEKKQ 733
Cdd:pfam12128 489 RLQSELRQarKRRDQASEALRQ-ASRRLEERQSALDELELQLFPQAGTL---LHFLRKEAPDWEQSIGKVISPELLHRTD 564
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 734 LQMVFDEEKT--------------QLQEELRLEHEQELKARLQQAEESFRQER-------EGLAQAAAWTEEKARSLTRD 792
Cdd:pfam12128 565 LDPEVWDGSVggelnlygvkldlkRIDVPEWAASEEELRERLDKAEEALQSARekqaaaeEQLVQANGELEKASREETFA 644
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 793 LE--QSHQEQLLSLMEKHALEKEELRKELSEyHQRELQEGRyesEKLQEENSILRNEITTLNEEdsisnLKLEELNGSQE 870
Cdd:pfam12128 645 RTalKNARLDLRRLFDEKQSEKDKKNKALAE-RKDSANERL---NSLEAQLKQLDKKHQAWLEE-----QKEQKREARTE 715
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 871 ELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENK-ELS------QKNSQNKEELKTLNQRLAEmlCQKEDPG 943
Cdd:pfam12128 716 KQAYWQVVEGALDAQLALLKAAIAARRSGAKAELKALETWYKrDLAslgvdpDVIAKLKREIRTLERKIER--IAVRRQE 793
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 944 TCT-----SEKWEQEN--------------ESLKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELERLK 1004
Cdd:pfam12128 794 VLRyfdwyQETWLQRRprlatqlsnieraiSELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLA 873
|
650 660 670
....*....|....*....|....*....|....*..
gi 1958782432 1005 QLHRCPDLSDFQQKMCSILSYNENLLKEKEVLSEELK 1041
Cdd:pfam12128 874 TLKEDANSEQAQGSIGERLAQLEDLKLKRDYLSESVK 910
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
448-1095 |
2.25e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 58.88 E-value: 2.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 448 NLRKLDEEYKeriaaLKNELRQEREQILQQVGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEY 527
Cdd:TIGR04523 104 DLSKINSEIK-----NDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLL 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 528 ENLTSKLQRSLENVLAEKFGD-LDPSSAEFFLQEERLAQMR-NEYEQQCRLLQDQVDELQSELEEYQAQgrvlRLPCQNA 605
Cdd:TIGR04523 179 EKEKLNIQKNIDKIKNKLLKLeLLLSNLKKKIQKNKSLESQiSELKKQNNQLKDNIEKKQQEINEKTTE----ISNTQTQ 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 606 LSEELDGHGDGIEQDQepgsgecNPLNMSIEAELVIEQLKEQhhrdLCHLRLELEDkvrhyekqldhtrVACEKEQVAMK 685
Cdd:TIGR04523 255 LNQLKDEQNKIKKQLS-------EKQKELEQNNKKIKELEKQ----LNQLKSEISD-------------LNNQKEQDWNK 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 686 QKYEQgMRTLEKQISELQSEIADLQGQAAVLKEAHHKAscrhEEEKKQLQmvfdEEKTQLQEELRlEHEQELKaRLQQAE 765
Cdd:TIGR04523 311 ELKSE-LKNQEKKLEEIQNQISQNNKIISQLNEQISQL----KKELTNSE----SENSEKQRELE-EKQNEIE-KLKKEN 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 766 ESFRQEREGLaqaaawteekaRSLTRDLEQSHQEQllslmEKHALEKEELRKELseyhQRELQEGRYESEKLQEENSILR 845
Cdd:TIGR04523 380 QSYKQEIKNL-----------ESQINDLESKIQNQ-----EKLNQQKDEQIKKL----QQEKELLEKEIERLKETIIKNN 439
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 846 NEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQvsdLKLKNQQLD---SENKELSQKNSQNK 922
Cdd:TIGR04523 440 SEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKE---LKSKEKELKklnEEKKELEEKVKDLT 516
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 923 EELKTLNQRLAEMlcqkedpgtcTSEKWEQENE--SLKEELDrykvqtstlvsSLEAELSEVKLQTHIVEQENlllkdEL 1000
Cdd:TIGR04523 517 KKISSLKEKIEKL----------ESEKKEKESKisDLEDELN-----------KDDFELKKENLEKEIDEKNK-----EI 570
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1001 ERLKQLHRCPDLSDFQQkmcsilsynENLLKEKEVLSEELKS-CADKLAESSLLEHRIATIKEEREAWEEQSQDLKSQLA 1079
Cdd:TIGR04523 571 EELKQTQKSLKKKQEEK---------QELIDQKEKEKKDLIKeIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKN 641
|
650
....*....|....*.
gi 1958782432 1080 LSQEKVQNLEDILKNV 1095
Cdd:TIGR04523 642 KLKQEVKQIKETIKEI 657
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
434-893 |
2.73e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 58.91 E-value: 2.73e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 434 VDDHHAAIERRNEYNlrkldeeYKERIAALKNEL----------RQEREQILQQVGKQRVELEQEIEKAKTEEnyirdrl 503
Cdd:TIGR02168 628 VDDLDNALELAKKLR-------PGYRIVTLDGDLvrpggvitggSAKTNSSILERRREIEELEEKIEELEEKI------- 693
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 504 alslkenNRLENELLENAEKLAEYENLTSKLQRslenvlaekfgDLDPSSAEFFLQEERLAQMRNEYEQqcrlLQDQVDE 583
Cdd:TIGR02168 694 -------AELEKALAELRKELEELEEELEQLRK-----------ELEELSRQISALRKDLARLEAEVEQ----LEERIAQ 751
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 584 LQSELEEYQAQgRVLRLPCQNALSEELDGHGDGIEQDQEpgsgecnplnmsieaelVIEQLKEQHhrdlchlrLELEDKV 663
Cdd:TIGR02168 752 LSKELTELEAE-IEELEERLEEAEEELAEAEAEIEELEA-----------------QIEQLKEEL--------KALREAL 805
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 664 RHYEKQLDHTRVAcekeqvamKQKYEQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKASCRHEEekkqlqmvFDEEKT 743
Cdd:TIGR02168 806 DELRAELTLLNEE--------AANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEE--------LEELIE 869
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 744 QLQEElrLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLE--QSHQEQLLSLMEKHALEKEELRKELSE 821
Cdd:TIGR02168 870 ELESE--LEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEelREKLAQLELRLEGLEVRIDNLQERLSE 947
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958782432 822 YHQRELQEGRYESEKLQEENSILRNEITTLNEE-DSISNLKL------EELNGSQEELWQKIETIEQEKASIQKMVEKL 893
Cdd:TIGR02168 948 EYSLTLEEAEALENKIEDDEEEARRRLKRLENKiKELGPVNLaaieeyEELKERYDFLTAQKEDLTEAKETLEEAIEEI 1026
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
696-1284 |
3.04e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 58.54 E-value: 3.04e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 696 EKQISELQSEIADLQGQAAVLkeahhkascrhEEEKKQLQMVFDE-EKTQLQEELRLEHEQELKARLQQAEESFRQEREG 774
Cdd:PRK03918 206 LREINEISSELPELREELEKL-----------EKEVKELEELKEEiEELEKELESLEGSKRKLEEKIRELEERIEELKKE 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 775 LAQaaawTEEKARSLTRdleqshqeqllslMEKHALEKEELRKELSEYHQrELQEGRYESEKLQEENSILRNEITTLNEE 854
Cdd:PRK03918 275 IEE----LEEKVKELKE-------------LKEKAEEYIKLSEFYEEYLD-ELREIEKRLSRLEEEINGIEERIKELEEK 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 855 DSisnlKLEELNGSQEELWQKIETIE------QEKASIQKMVEKLKKQVSDLKLknQQLDSENKELSQKNSQNKEELKTL 928
Cdd:PRK03918 337 EE----RLEELKKKLKELEKRLEELEerhelyEEAKAKKEELERLKKRLTGLTP--EKLEKELEELEKAKEEIEEEISKI 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 929 NQRLAEMLCQKED-----------PGTCTSEKWEQENESLKEELDRYKVQtstlVSSLEAELSEVKLQTHIVEQENLLLK 997
Cdd:PRK03918 411 TARIGELKKEIKElkkaieelkkaKGKCPVCGRELTEEHRKELLEEYTAE----LKRIEKELKEIEEKERKLRKELRELE 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 998 DELERLKQLHRCPDLSDFQQKMCSILS-YNENLLKEKEVLSEELKSCADKLaessllEHRIATIKEEREAWEEqsqdLKS 1076
Cdd:PRK03918 487 KVLKKESELIKLKELAEQLKELEEKLKkYNLEELEKKAEEYEKLKEKLIKL------KGEIKSLKKELEKLEE----LKK 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1077 QLALSQEKVQNLEDILKNVNLQMAQI----ESDLQVTRQEKEALKQEVMSLhlqlqnaidKDWVSEtathlsgLQGQQKR 1152
Cdd:PRK03918 557 KLAELEKKLDELEEELAELLKELEELgfesVEELEERLKELEPFYNEYLEL---------KDAEKE-------LEREEKE 620
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1153 LSWNKLDHLMSEEPellcqeskrlqtvVQNTQADLTHSREKIRQLESNLLPTKHQKqlnqsctvkpIEQEKLALKREceq 1232
Cdd:PRK03918 621 LKKLEEELDKAFEE-------------LAETEKRLEELRKELEELEKKYSEEEYEE----------LREEYLELSRE--- 674
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|..
gi 1958782432 1233 srkerspTSRKVSQMSSLERELETIHLENEGLKKKQVRLDEKLMEMQPLRSA 1284
Cdd:PRK03918 675 -------LAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKA 719
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
345-1075 |
3.32e-08 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 58.44 E-value: 3.32e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 345 QEEGIENSQEILKALDFSLDGNINLTELTLALENELLVTKNGIHQAALAsfKAEIRHLLERVDQVVREKEKLRSDLDKAE 424
Cdd:pfam02463 276 EEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKK--KAEKELKKEKEEIEELEKELKELEIKREA 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 425 KLKSLMASEVDDHHAAIERRNEYNLRKLDEEYKERIAALKNELRQEREQILQQVGKQRVELEQEIEKAKTEENYIRDRLA 504
Cdd:pfam02463 354 EEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILE 433
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 505 LSLKENNRLENELLENAEKLAEYENLTSKLQRSLENV-----------------LAEKFGDLDPSSAEFFLQEERLAQMR 567
Cdd:pfam02463 434 EEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSedllketqlvklqeqleLLLSRQKLEERSQKESKARSGLKVLL 513
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 568 NEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPCQNALSEELdghGDGIEQDQEPGSGECNPLNMSIEAELVIEQLKEQ 647
Cdd:pfam02463 514 ALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSAT---ADEVEERQKLVRALTELPLGARKLRLLIPKLKLP 590
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 648 hhrDLCHLRLELEDKVRHYEKQLDHTRVACEKEQVAMKQKYEQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKASCRH 727
Cdd:pfam02463 591 ---LKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKAS 667
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 728 EEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQSH----QEQLLS 803
Cdd:pfam02463 668 LSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEElkllKQKIDE 747
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 804 LMEKHALEKEELRKELSEYHQRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEK 883
Cdd:pfam02463 748 EEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQE 827
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 884 ASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKEdpgtctsekwEQENESLKEELDR 963
Cdd:pfam02463 828 EKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKL----------KDELESKEEKEKE 897
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 964 YKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQLHRCPDLSDFQQKMcSILSYNENLLKEKEVLSEELKSC 1043
Cdd:pfam02463 898 EKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEEN-NKEEEEERNKRLLLAKEELGKVN 976
|
730 740 750
....*....|....*....|....*....|..
gi 1958782432 1044 ADKLAESSLLEHRIATIKEEREAWEEQSQDLK 1075
Cdd:pfam02463 977 LMAIEEFEEKEERYNKDELEKERLEEEKKKLI 1008
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
385-854 |
5.03e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 58.00 E-value: 5.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 385 NGIHQAALasfKA-EIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMAS-----EVDDHHAAIERRNEyNLRKLDEEY-- 456
Cdd:COG4913 238 ERAHEALE---DArEQIELLEPIRELAERYAAARERLAELEYLRAALRLwfaqrRLELLEAELEELRA-ELARLEAELer 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 457 -KERIAALKNELRQEREQILQQVGKQRVELEQEIEKAKTEenyiRDRLALSLKENNRLENEL-LENAEKLAEYENLTSKL 534
Cdd:COG4913 314 lEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERE----LEERERRRARLEALLAALgLPLPASAEEFAALRAEA 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 535 QRSLENVlaekfgdldpsSAEFFLQEERLAQMRNEYEQqcrlLQDQVDELQSELEEYQAQG-----RVLRLpcQNALSEE 609
Cdd:COG4913 390 AALLEAL-----------EEELEALEEALAEAEAALRD----LRRELRELEAEIASLERRKsnipaRLLAL--RDALAEA 452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 610 LdghgdGIEQDQEPGSGE-------CNPLNMSIEAEL-------------------VIEQLKEQHHRDLCHLRLELEDKV 663
Cdd:COG4913 453 L-----GLDEAELPFVGElievrpeEERWRGAIERVLggfaltllvppehyaaalrWVNRLHLRGRLVYERVRTGLPDPE 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 664 R-------------------------HYEKQLDHTRVACEKE----------QVAMKQKYEQG----------------- 691
Cdd:COG4913 528 RprldpdslagkldfkphpfrawleaELGRRFDYVCVDSPEElrrhpraitrAGQVKGNGTRHekddrrrirsryvlgfd 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 692 ----MRTLEKQISELQSEIADLQGQAAVLKEAHHKASCRHEEEKKQLQMVFDEEKT-QLQEELRlEHEQELK-------- 758
Cdd:COG4913 608 nrakLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVaSAEREIA-ELEAELErldassdd 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 759 -ARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQsHQEQLLSLMEKH----ALEKEELRKELSEYHQRELQEGRYE 833
Cdd:COG4913 687 lAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQ-AEEELDELQDRLeaaeDLARLELRALLEERFAAALGDAVER 765
|
570 580
....*....|....*....|...
gi 1958782432 834 --SEKLQEENSILRNEITTLNEE 854
Cdd:COG4913 766 elRENLEERIDALRARLNRAEEE 788
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
389-594 |
1.20e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 56.46 E-value: 1.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 389 QAALASFKAEIRHLLERVDQVVREKEKLRSDLDkaeklkslmasEVDDHHAAIERRNEYNLRKLD-EEYKERIAALKNEL 467
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELD-----------ALQERREALQRLAEYSWDEIDvASAEREIAELEAEL 677
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 468 RQERE--QILQQVGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLenvLAEK 545
Cdd:COG4913 678 ERLDAssDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRAL---LEER 754
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1958782432 546 FGDLdpssaeffLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQ 594
Cdd:COG4913 755 FAAA--------LGDAVERELRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
431-1005 |
1.36e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 56.69 E-value: 1.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 431 ASEVDDHHAAIERRNEYNLRKLdEEYKERIAALKNELRQEREQILQQVGKQRVELEQEIEKAKTEEN------YIRDRLA 504
Cdd:PTZ00121 1175 AKKAEAARKAEEVRKAEELRKA-EDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEeakkaeEERNNEE 1253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 505 LSLKENNRLENELLENAEKLAEYENLTSKLQRSLENVLAEKFGDLDP-SSAEFFLQEERLAQMRNEYEQQCRLLQDQVDE 583
Cdd:PTZ00121 1254 IRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEkKKADEAKKKAEEAKKADEAKKKAEEAKKKADA 1333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 584 LQSELEEYQAQGRVLRLPCQNAL--SEELDGHGDGIEQDQEPGSGECNPLNMSIEAELVIEQLKEQHHRDlcHLRLELED 661
Cdd:PTZ00121 1334 AKKKAEEAKKAAEAAKAEAEAAAdeAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEED--KKKADELK 1411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 662 KVRHYEKQLDHTRVACEKEQVA--MKQKYEQGMRTLE-KQISELQSEIADLQGQAAVLKEAHHKASCRHEEEKKQLQMVF 738
Cdd:PTZ00121 1412 KAAAAKKKADEAKKKAEEKKKAdeAKKKAEEAKKADEaKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKK 1491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 739 DEEKTQLQEELRLEHEQELKA-RLQQAEESFRQEREGLAQAAAWTEE--KARSLTRDLEQSHQEQLLSLMEKHALEKEEL 815
Cdd:PTZ00121 1492 AEEAKKKADEAKKAAEAKKKAdEAKKAEEAKKADEAKKAEEAKKADEakKAEEKKKADELKKAEELKKAEEKKKAEEAKK 1571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 816 RKELSEYHQRELQEGRYESEKLQEENSILRNEIttlneedsiSNLKLEELNGSQEELWQKIETIEQEKasIQKMVEKLKK 895
Cdd:PTZ00121 1572 AEEDKNMALRKAEEAKKAEEARIEEVMKLYEEE---------KKMKAEEAKKAEEAKIKAEELKKAEE--EKKKVEQLKK 1640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 896 QVSDLKLKNQQLDSENKELSQKNSQNKEElktlnqrlaemlcQKEDPGTCTSEKWEQENESLKEELDRYKVQTSTLVSSL 975
Cdd:PTZ00121 1641 KEAEEKKKAEELKKAEEENKIKAAEEAKK-------------AEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEEL 1707
|
570 580 590
....*....|....*....|....*....|
gi 1958782432 976 EAELSEVKLQTHIVEQENLLLKDELERLKQ 1005
Cdd:PTZ00121 1708 KKKEAEEKKKAEELKKAEEENKIKAEEAKK 1737
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
728-1120 |
1.37e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 56.31 E-value: 1.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 728 EEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARsltrdlEQSHQEQLLSLMEK 807
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQE------LEALEAELAELPER 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 808 haleKEELRKELSEYHQRELQEgryesEKLQEENSILRNEITTLNEEDSISNLK-LEELNGSQEELWQKIETIEQEKASI 886
Cdd:COG4717 148 ----LEELEERLEELRELEEEL-----EELEAELAELQEELEELLEQLSLATEEeLQDLAEELEELQQRLAELEEELEEA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 887 QKMVEKLKKQVSDLklknqQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKEDPGTCTS------------------- 947
Cdd:COG4717 219 QEELEELEEELEQL-----ENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTiagvlflvlgllallflll 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 948 EKWEQENESLKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQLHRcpDLSDFQQKM--CSILSY 1025
Cdd:COG4717 294 AREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLR--EAEELEEELqlEELEQE 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1026 NENLLKEKEVLSEE--------LKSCADKLAESSLLEHRIATIKEER---------EAWEEQSQDLKSQLALSQEKVQNL 1088
Cdd:COG4717 372 IAALLAEAGVEDEEelraaleqAEEYQELKEELEELEEQLEELLGELeellealdeEELEEELEELEEELEELEEELEEL 451
|
410 420 430
....*....|....*....|....*....|....
gi 1958782432 1089 EDILKNVNLQMAQIESD--LQVTRQEKEALKQEV 1120
Cdd:COG4717 452 REELAELEAELEQLEEDgeLAELLQELEELKAEL 485
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
468-1040 |
1.97e-07 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 55.95 E-value: 1.97e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 468 RQEREqiLQQVGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTSKL---QRSLENVLAE 544
Cdd:pfam01576 2 RQEEE--MQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLaarKQELEEILHE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 545 KFGDLDPssaefflQEERLAQMRNEYEQqcrlLQDQVDELQSELEEYQAQGRVLRLP--CQNALSEELDGHGDGIEQDQE 622
Cdd:pfam01576 80 LESRLEE-------EEERSQQLQNEKKK----MQQHIQDLEEQLDEEEAARQKLQLEkvTTEAKIKKLEEDILLLEDQNS 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 623 PGSGECNPLNMSIEAELVIEQLKEQHHRDLCHLRL-------ELEDKVRHYEKQldhtrvacEKEQVAMKQKYEQGMRTL 695
Cdd:pfam01576 149 KLSKERKLLEERISEFTSNLAEEEEKAKSLSKLKNkheamisDLEERLKKEEKG--------RQELEKAKRKLEGESTDL 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 696 EKQISELQSEIADLQGQAAVLKEAHHKASCRHEEE---KKQLQMVFDEEKTQ---LQEELRLEHEQELKARLQQAE---- 765
Cdd:pfam01576 221 QEQIAELQAQIAELRAQLAKKEEELQAALARLEEEtaqKNNALKKIRELEAQiseLQEDLESERAARNKAEKQRRDlgee 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 766 -ESFRQERE-GLAQAAAWTEEKAR------SLTRDLEQ---SHQEQLLSLMEKHALEKEELRKELsEYHQRELQEGRYES 834
Cdd:pfam01576 301 lEALKTELEdTLDTTAAQQELRSKreqevtELKKALEEetrSHEAQLQEMRQKHTQALEELTEQL-EQAKRNKANLEKAK 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 835 EKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKEL 914
Cdd:pfam01576 380 QALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKL 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 915 SQKNSQNKEELKTLNQRLAEMLCQKEDPGTcTSEKWEQENESLKEELDRYKVQTSTL---VSSLEAELSEVKLQthiVEQ 991
Cdd:pfam01576 460 SKDVSSLESQLQDTQELLQEETRQKLNLST-RLRQLEDERNSLQEQLEEEEEAKRNVerqLSTLQAQLSDMKKK---LEE 535
|
570 580 590 600
....*....|....*....|....*....|....*....|....*....
gi 1958782432 992 ENLLLKDELERLKQLHRcpDLSDFQQKMCSILSYNENLLKEKEVLSEEL 1040
Cdd:pfam01576 536 DAGTLEALEEGKKRLQR--ELEALTQQLEEKAAAYDKLEKTKNRLQQEL 582
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
868-1155 |
5.06e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.61 E-value: 5.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 868 SQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMlcqkedpgtcts 947
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAEL------------ 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 948 ekwEQENESLKEELDRYKVQTSTLVSSLEaelsevklQTHIVEQENLLLKDElerlkqlhrcpDLSDFQQKMCSILSYNE 1027
Cdd:COG4942 89 ---EKEIAELRAELEAQKEELAELLRALY--------RLGRQPPLALLLSPE-----------DFLDAVRRLQYLKYLAP 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1028 NLLKEKEVLSEELkscadklaessllehriATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDLQ 1107
Cdd:COG4942 147 ARREQAEELRADL-----------------AELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELA 209
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1958782432 1108 VTRQEKEALKQEVMSLHLQLQNAIDKDWVSETATHLSGLQGQQKRLSW 1155
Cdd:COG4942 210 ELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKGKLPW 257
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
396-1003 |
7.47e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 54.38 E-value: 7.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 396 KAEIRHLLERVDQVVREKEKLRSDLDKAEKLKslmasEVDDHHAAIERRNEYNLRKLDEEYKERIAALKNElrQEREQIL 475
Cdd:PTZ00121 1259 EARMAHFARRQAAIKAEEARKADELKKAEEKK-----KADEAKKAEEKKKADEAKKKAEEAKKADEAKKKA--EEAKKKA 1331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 476 QQVGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLEnvlAEKFGDLDPSSAE 555
Cdd:PTZ00121 1332 DAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADE---AKKKAEEDKKKAD 1408
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 556 FFLQEERLAQMRNEYEQQCRLLQdQVDELQSELEEYQAQGRVLRLPCQNALSEELDGHGDGIEQDQEpgsgecnpLNMSI 635
Cdd:PTZ00121 1409 ELKKAAAAKKKADEAKKKAEEKK-KADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADE--------AKKKA 1479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 636 EAELVIEQLK---EQHHRDLCHLRLELEDKVRHYE-KQLDHTRVACEKEQVAMKQKYEQGMRTLEKQISELQSEIADLQG 711
Cdd:PTZ00121 1480 EEAKKADEAKkkaEEAKKKADEAKKAAEAKKKADEaKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKK 1559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 712 QAAVLK-------EAHHKASCRHEEEKKQLQ--------MVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLA 776
Cdd:PTZ00121 1560 AEEKKKaeeakkaEEDKNMALRKAEEAKKAEearieevmKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLK 1639
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 777 QAAAWTEEKARSLTRDLEQSH--QEQLLSLMEKHALEKEELRKELSEYHQRELQEGRYESE------------------- 835
Cdd:PTZ00121 1640 KKEAEEKKKAEELKKAEEENKikAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEakkaeelkkkeaeekkkae 1719
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 836 ---KLQEENSILRNEITTLNEEDSisnLKLEELNGSQEELwQKIETIEQEKASIQKMVEKLKKQV--SDLKLKNQQLDSE 910
Cdd:PTZ00121 1720 elkKAEEENKIKAEEAKKEAEEDK---KKAEEAKKDEEEK-KKIAHLKKEEEKKAEEIRKEKEAVieEELDEEDEKRRME 1795
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 911 NKELSQKNSQNKEELKTLNQRLAEML-CQKEDPGTCTSEKWEQENESLKE--ELDRYKVQTSTLVSSLEAELSEVKLQTH 987
Cdd:PTZ00121 1796 VDKKIKDIFDNFANIIEGGKEGNLVInDSKEMEDSAIKEVADSKNMQLEEadAFEKHKFNKNNENGEDGNKEADFNKEKD 1875
|
650
....*....|....*...
gi 1958782432 988 IVE--QENLLLKDELERL 1003
Cdd:PTZ00121 1876 LKEddEEEIEEADEIEKI 1893
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
701-1201 |
9.54e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.77 E-value: 9.54e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 701 ELQSEIADLQGQAAVLKEAHHKAscrhEEEKKQLQmvfdeektqlqeelRLEHEQELKARLQQAEESFRQEREGLAQAAA 780
Cdd:COG4913 222 DTFEAADALVEHFDDLERAHEAL----EDAREQIE--------------LLEPIRELAERYAAARERLAELEYLRAALRL 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 781 WTEEKARSLTRDLEQSHQEQLLSLMEKHAL---EKEELRKELSEYHQRELQEGRYESEKLQEENSILRNEITTLNE---- 853
Cdd:COG4913 284 WFAQRRLELLEAELEELRAELARLEAELERleaRLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERrrar 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 854 -EDSISNLKL------EELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELK 926
Cdd:COG4913 364 lEALLAALGLplpasaEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLL 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 927 TLNQRLAEMLCQKED--PGTC-------TSEKWEQ---------------------------ENESLKEELDRYKVQTST 970
Cdd:COG4913 444 ALRDALAEALGLDEAelPFVGelievrpEEERWRGaiervlggfaltllvppehyaaalrwvNRLHLRGRLVYERVRTGL 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 971 ----LVSSLEAELSE-VKLQTHIVEQEnllLKDELERLKQLHRCPDLSDFQQKMCSI----LSYNENLLKEK-------- 1033
Cdd:COG4913 524 pdpeRPRLDPDSLAGkLDFKPHPFRAW---LEAELGRRFDYVCVDSPEELRRHPRAItragQVKGNGTRHEKddrrrirs 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1034 ------------EVLSEELKSCADKLAEsslLEHRIATIKEEREAWEEQSQDLKSQLALS---------QEKVQNLE--- 1089
Cdd:COG4913 601 ryvlgfdnraklAALEAELAELEEELAE---AEERLEALEAELDALQERREALQRLAEYSwdeidvasaEREIAELEael 677
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1090 -------DILKNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQNAidKDWVSETATHLSGLQGQQKRLSWNKLDHLM 1162
Cdd:COG4913 678 erldassDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQA--EEELDELQDRLEAAEDLARLELRALLEERF 755
|
570 580 590
....*....|....*....|....*....|....*....
gi 1958782432 1163 SEEpellcQESKRLQTVVQNTQADLTHSREKIRQLESNL 1201
Cdd:COG4913 756 AAA-----LGDAVERELRENLEERIDALRARLNRAEEEL 789
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
398-611 |
1.45e-06 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 53.01 E-value: 1.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 398 EIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEYNLRKLDEEYKERIAALkNELRQEREQILQQ 477
Cdd:PRK05771 44 RLRKLRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVEEELEKIEKEIKELEEEI-SELENEIKELEQE 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 478 vgKQRVE----LEQEIEKAKTEENYIrdRLALSLKENNRLENELLENAEKLAEYENLTSKL------QRSLENVLAEKFG 547
Cdd:PRK05771 123 --IERLEpwgnFDLDLSLLLGFKYVS--VFVGTVPEDKLEELKLESDVENVEYISTDKGYVyvvvvvLKELSDEVEEELK 198
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958782432 548 DLDPSSAEFFlQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPCQNALSEELD 611
Cdd:PRK05771 199 KLGFERLELE-EEGTPSELIREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIELE 261
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
681-917 |
1.72e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.07 E-value: 1.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 681 QVAMKQKYEQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKASCRHEEEKKQLQmVFDEEKTQLQEELRleheqELKAR 760
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIR-ALEQELAALEAELA-----ELEKE 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 761 LQQAEESFRQEREGLAQ--AAAWTEEKARSLTRDLEQSHQEQLLSLMekhalekeELRKELSEYHQRELQEGRYESEKLQ 838
Cdd:COG4942 92 IAELRAELEAQKEELAEllRALYRLGRQPPLALLLSPEDFLDAVRRL--------QYLKYLAPARREQAEELRADLAELA 163
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958782432 839 EENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQK 917
Cdd:COG4942 164 ALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
707-1008 |
1.80e-06 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 52.99 E-value: 1.80e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 707 ADLQGQAAVLKEAHHkascrHEEEKKQLQMvfDEEKTQLQEELRLEHEQE---LKARLQQAEESFRQEREGLAqaaAWTE 783
Cdd:PRK11281 39 ADVQAQLDALNKQKL-----LEAEDKLVQQ--DLEQTLALLDKIDRQKEEteqLKQQLAQAPAKLRQAQAELE---ALKD 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 784 EKARSLTRDLEQSHQEQLLSLMEKHALEKEELRKELSEYH-------------QRELQEGryeSEKLQEENSILRNeiTT 850
Cdd:PRK11281 109 DNDEETRETLSTLSLRQLESRLAQTLDQLQNAQNDLAEYNsqlvslqtqperaQAALYAN---SQRLQQIRNLLKG--GK 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 851 LNEEDSISNLKlEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELsqknsQNkeelkTLNQ 930
Cdd:PRK11281 184 VGGKALRPSQR-VLLQAEQALLNAQNDLQRKSLEGNTQLQDLLQKQRDYLTARIQRLEHQLQLL-----QE-----AINS 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 931 -RLAEmlcqkedpgtctSEKWEQENESLKEEldrYKVQTSTLV---SSLEAELSEVKLQ----THIVEQENLLLKDELER 1002
Cdd:PRK11281 253 kRLTL------------SEKTVQEAQSQDEA---ARIQANPLVaqeLEINLQLSQRLLKatekLNTLTQQNLRVKNWLDR 317
|
....*.
gi 1958782432 1003 LKQLHR 1008
Cdd:PRK11281 318 LTQSER 323
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
692-1123 |
1.90e-06 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 52.77 E-value: 1.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 692 MRTLEKQISELQSEIADLQGQAAVLKEAH-HKASC---RHEEEKKQLQMVFDEEKTQLQEELrleheqelKARLQQAEES 767
Cdd:COG5022 812 YRSYLACIIKLQKTIKREKKLRETEEVEFsLKAEVliqKFGRSLKAKKRFSLLKKETIYLQS--------AQRVELAERQ 883
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 768 FRQ------EREGLAQAAAWTEEKARSLTRDLEQSHQEQLLSLMEKHALEKEELRK-ELSEYHQRELQEGRyESEKLQEE 840
Cdd:COG5022 884 LQElkidvkSISSLKLVNLELESEIIELKKSLSSDLIENLEFKTELIARLKKLLNNiDLEEGPSIEYVKLP-ELNKLHEV 962
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 841 NSILRNEITTLNEEDSISNLKLEELNGSQEEL---WQKIETIEQEKASIQKMVEKLKK---QVSDLKLKNQQLDSENKEL 914
Cdd:COG5022 963 ESKLKETSEEYEDLLKKSTILVREGNKANSELknfKKELAELSKQYGALQESTKQLKElpvEVAELQSASKIISSESTEL 1042
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 915 SQKNSQNK------EELKTLNQRLAEMLCQKEDPGTCTSEKWEQE---------NESLKEELDRYKVQTSTLVSSLEAEL 979
Cdd:COG5022 1043 SILKPLQKlkglllLENNQLQARYKALKLRRENSLLDDKQLYQLEstenllktiNVKDLEVTNRNLVKPANVLQFIVAQM 1122
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 980 SEVKLQTHIVE---QENLLLKDELERLKQLHRCPDLSDFQQKMCSILSYN-ENLLKEKEVLSEELKSCADKLAESSLLEH 1055
Cdd:COG5022 1123 IKLNLLQEISKflsQLVNTLEPVFQKLSVLQLELDGLFWEANLEALPSPPpFAALSEKRLYQSALYDEKSKLSSSEVNDL 1202
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1056 RIATIKEEREAWEEQSQDLKSQLALSQEKV-----------QNLEDILKN--------VNLQMAQIESDLQVTRQEKEAL 1116
Cdd:COG5022 1203 KNELIALFSKIFSGWPRGDKLKKLISEGWVpteystslkgfNNLNKKFDTpasmsnekLLSLLNSIDNLLSSYKLEEEVL 1282
|
....*..
gi 1958782432 1117 KQEVMSL 1123
Cdd:COG5022 1283 PATINSL 1289
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
558-932 |
2.21e-06 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 52.65 E-value: 2.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 558 LQEERLAQMRNEYEQQcrllqdqvDELQSELE-EYQAQGRVLRLpCQNALseeldGHGDGIEQDQEpgsgECNPLNMSIE 636
Cdd:COG3096 303 EEQYRLVEMARELEEL--------SARESDLEqDYQAASDHLNL-VQTAL-----RQQEKIERYQE----DLEELTERLE 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 637 -AELVIEQLKEQHHRdlCHLRLEL-EDKVRHYEKQLDHTRVACEKEQVAMKQkYEQGMRTLEKqiSELQSEIADLQGQAA 714
Cdd:COG3096 365 eQEEVVEEAAEQLAE--AEARLEAaEEEVDSLKSQLADYQQALDVQQTRAIQ-YQQAVQALEK--ARALCGLPDLTPENA 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 715 VLKEAHHKAscrheEEKKQLQMVFD-EEKTQLQEELRLEHEQELKARL------------QQAEESFRQEREGLAQAA-- 779
Cdd:COG3096 440 EDYLAAFRA-----KEQQATEEVLElEQKLSVADAARRQFEKAYELVCkiageversqawQTARELLRRYRSQQALAQrl 514
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 780 -------------AWTEEKARSLTRDLEQSHQEQLLS--LMEKHALEKEELRKELSEYhQRELQEGRYESEKLQEENSIL 844
Cdd:COG3096 515 qqlraqlaeleqrLRQQQNAERLLEEFCQRIGQQLDAaeELEELLAELEAQLEELEEQ-AAEAVEQRSELRQQLEQLRAR 593
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 845 RNEITTLNEEDSISNLKLEELngsQEELWQKIETIEQEKASIQKMVEKLKKQV---SDLKLKNQQLDSENKELSQKNSQN 921
Cdd:COG3096 594 IKELAARAPAWLAAQDALERL---REQSGEALADSQEVTAAMQQLLEREREATverDELAARKQALESQIERLSQPGGAE 670
|
410
....*....|.
gi 1958782432 922 KEELKTLNQRL 932
Cdd:COG3096 671 DPRLLALAERL 681
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
720-1008 |
2.81e-06 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 52.05 E-value: 2.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 720 HHKASCRHEEEKKQLQMvfdEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQSHQE 799
Cdd:pfam17380 280 HQKAVSERQQQEKFEKM---EQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAMERERELERIRQE 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 800 QLLSLMEKhaLEKEELRKELSEY---------HQRELQEGRYESE-----KLQEEN---SILRNEITTLNEEDSISNLKL 862
Cdd:pfam17380 357 ERKRELER--IRQEEIAMEISRMrelerlqmeRQQKNERVRQELEaarkvKILEEErqrKIQQQKVEMEQIRAEQEEARQ 434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 863 EELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKEDP 942
Cdd:pfam17380 435 REVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERK 514
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1958782432 943 GTCTSEKWEQENESLKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLkDELERLKQLHR 1008
Cdd:pfam17380 515 RKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRL-EAMEREREMMR 579
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
444-932 |
2.96e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 52.27 E-value: 2.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 444 RNEYNLRKLDEEykerIAALKNELRQEREQI-------------LQQVGKQRVELEQEIEKAkteenyiRDRLALSlken 510
Cdd:PRK04863 276 RHANERRVHLEE----ALELRRELYTSRRQLaaeqyrlvemareLAELNEAESDLEQDYQAA-------SDHLNLV---- 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 511 nrleNELLENAEKLAEYENLTSKLQRSLEnvlaekfgdldpsSAEFFLQEerLAQMRNEYEQQCRLLQDQVDELQSELEE 590
Cdd:PRK04863 341 ----QTALRQQEKIERYQADLEELEERLE-------------EQNEVVEE--ADEQQEENEARAEAAEEEVDELKSQLAD 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 591 YQ-----AQGRVLRLpcQNALseeldghgdgieQDQEPGSGECNPLNMSIE-AELVIEQLKEQHHrdlchlrlELEDKVR 664
Cdd:PRK04863 402 YQqaldvQQTRAIQY--QQAV------------QALERAKQLCGLPDLTADnAEDWLEEFQAKEQ--------EATEELL 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 665 HYEKQLDHTRVAcekeqvamKQKYEQGMRTLEKQISELQSEIADLQGQAAVLkeahhkascRHEEEKKQLQMVfdeektq 744
Cdd:PRK04863 460 SLEQKLSVAQAA--------HSQFEQAYQLVRKIAGEVSRSEAWDVARELLR---------RLREQRHLAEQL------- 515
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 745 lqeelrleheQELKARLQQAEESFRQEREglaqaaawteekARSLTRDLEQSHQEQLL--SLMEKHALEKEELRKELSEY 822
Cdd:PRK04863 516 ----------QQLRMRLSELEQRLRQQQR------------AERLLAEFCKRLGKNLDdeDELEQLQEELEARLESLSES 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 823 hQRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELngsQEELWQKIETIEQEKASIQKMVEKLKK---QVSD 899
Cdd:PRK04863 574 -VSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDALARL---REQSGEEFEDSQDVTEYMQQLLEREREltvERDE 649
|
490 500 510
....*....|....*....|....*....|...
gi 1958782432 900 LKLKNQQLDSENKELSQKNSQNKEELKTLNQRL 932
Cdd:PRK04863 650 LAARKQALDEEIERLSQPGGSEDPRLNALAERF 682
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
835-1104 |
3.55e-06 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 51.47 E-value: 3.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 835 EKLQEENSIlrnEITTLNEEdsISNLKLEELNGSQEELWQKIETIEQ-------EKASIQKM-VEKLKKQVSDLKLKNQQ 906
Cdd:PRK05771 23 EALHELGVV---HIEDLKEE--LSNERLRKLRSLLTKLSEALDKLRSylpklnpLREEKKKVsVKSLEELIKDVEEELEK 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 907 LDSENKELSQKNSQNKEELKTLNQRLAEMLCQK---EDP-------------GTCTSEKWE---QENESLKEELDRYKVQ 967
Cdd:PRK05771 98 IEKEIKELEEEISELENEIKELEQEIERLEPWGnfdLDLslllgfkyvsvfvGTVPEDKLEelkLESDVENVEYISTDKG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 968 TSTLVSSLEAELSEvklqthivEQENLLLKDELERLKqlhrCPDLSDFQQKMCSILSYNENLLKEKEVLSEELKSCADKL 1047
Cdd:PRK05771 178 YVYVVVVVLKELSD--------EVEEELKKLGFERLE----LEEEGTPSELIREIKEELEEIEKERESLLEELKELAKKY 245
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958782432 1048 AEssllehRIATIKEEREAwEEQSQDLKSQLALSQ-----------EKVQNLEDILKNVNLQMAQIES 1104
Cdd:PRK05771 246 LE------ELLALYEYLEI-ELERAEALSKFLKTDktfaiegwvpeDRVKKLKELIDKATGGSAYVEF 306
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
721-1427 |
3.68e-06 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 51.90 E-value: 3.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 721 HKASCRHEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQSHQEQ 800
Cdd:pfam02463 187 ELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEK 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 801 LLSLMEKHALEKEELRKELSEYHQRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIE 880
Cdd:pfam02463 267 LAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKE 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 881 QEKASIQKmvEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKEDPGTCTSEKWEQENESLKEE 960
Cdd:pfam02463 347 LEIKREAE--EEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEE 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 961 LDRYKVQTSTLVSSLE-AELSEVKLQTHIVEQENLLLKDELERLKQLHRCPDLSDFQQKMCSILSYNENLLKEKEV-LSE 1038
Cdd:pfam02463 425 KKEELEILEEEEESIElKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQkESK 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1039 ELKSCADKLAESSLLEHRIATIKEERE----------------AWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQI 1102
Cdd:pfam02463 505 ARSGLKVLLALIKDGVGGRIISAHGRLgdlgvavenykvaistAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLI 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1103 ESDLQVTRQEKEALKQEVMSLHLQLQNAIDKDWVSETATHLSGLQGQQKRLSWNKLDHLM-------SEEPELLCQESKR 1175
Cdd:pfam02463 585 PKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKesglrkgVSLEEGLAEKSEV 664
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1176 LQTVVQNTQADLTHSREKIRQLESNLLPTKHQKQLNQSCTVKPIEQEKLALKRECE-------QSRKERSPTSRKVSQMS 1248
Cdd:pfam02463 665 KASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEelladrvQEAQDKINEELKLLKQK 744
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1249 SLERELETIHLENEGLKKKQVRLDEKLMEMQPLRSAGThspsshwDLQLLQQQACPMVPREQFLQLQQQLLQAEKRSQHL 1328
Cdd:pfam02463 745 IDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREK-------TEKLKVEEEKEEKLKAQEEELRALEEELKEEAELL 817
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1329 QEELDNRTSEPNTVQGSQEHLVNLMEERMIEVEQKLKLVKRLLQEKVNQLKEQLCKNSKTDAMVKDLYVENAQLLKALEM 1408
Cdd:pfam02463 818 EEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKE 897
|
730
....*....|....*....
gi 1958782432 1409 TEQRQKTAEKKNFLLEEKI 1427
Cdd:pfam02463 898 EKKELEEESQKLNLLEEKE 916
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
451-1283 |
4.82e-06 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 51.51 E-value: 4.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 451 KLDEEYKERIAALKNELRQEREQILQQVGKQRVELEQEIEKAKTEENYirdrlalslkeNNRLENELLENAEKLAEYENL 530
Cdd:pfam02463 166 RLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYY-----------QLKEKLELEEEYLLYLDYLKL 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 531 TSKLQRSLENVLAEKFGDLDPSSAEFFLQEERLAQMRNEYEQQCRLLQDQ--VDELQSELEEYQAQGRVLRLPCQNALSE 608
Cdd:pfam02463 235 NEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQeeELKLLAKEEEELKSELLKLERRKVDDEE 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 609 ELDGHgdgieqdqepgsgECNPLNMSIEAELVIEQLKEQHHRDLCHLRLELEDKVRHYEKQLDHTRVACEKEQVAMKQKY 688
Cdd:pfam02463 315 KLKES-------------EKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKL 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 689 EQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKASCRHEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESF 768
Cdd:pfam02463 382 ESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLL 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 769 RQEREGLAQAAAWTEEKARSLTRDLEQSHQEQLLSLMEKHALEKEELRKELseyhqRELQEGRYESEKLQEENSILRNEI 848
Cdd:pfam02463 462 KDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVL-----LALIKDGVGGRIISAHGRLGDLGV 536
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 849 TTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASiqKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTL 928
Cdd:pfam02463 537 AVENYKVAISTAVIVEVSATADEVEERQKLVRALTEL--PLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLE 614
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 929 NQRLAEMLCQKEDPGTCTSEKWEQENESLKEELDRYKVQTS---TLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQ 1005
Cdd:pfam02463 615 ADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEeglAEKSEVKASLSELTKELLEIQELQEKAESELAKEEI 694
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1006 LHRCPDLSDFQQKMCSILsynENLLKEKEVLSEELKSCADKLA--ESSLLEHRIATIKEEREAWEEQSQDLKSQLALSQE 1083
Cdd:pfam02463 695 LRRQLEIKKKEQREKEEL---KKLKLEAEELLADRVQEAQDKIneELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSL 771
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1084 KVQNLEDILKNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQNAIDKdwvsetathLSGLQGQQKRLSWNKLDHLMS 1163
Cdd:pfam02463 772 KEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQ---------LLIEQEEKIKEEELEELALEL 842
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1164 EEPELLCQESKRLQTVVQNTQADLTHSREKIRQLESNLLPTKHQKQLNQSCTVKPIEQEKLALKRECEQSRKERSPTSRK 1243
Cdd:pfam02463 843 KEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEER 922
|
810 820 830 840
....*....|....*....|....*....|....*....|
gi 1958782432 1244 VSQMSSLERELETIHLENEGLKKKQVRLDEKLMEMQPLRS 1283
Cdd:pfam02463 923 IKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERN 962
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
407-1115 |
4.89e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 51.68 E-value: 4.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 407 DQVVREKEKLRSDLDKAEKLKSLMASEV--DDHHAAIERRNEYNLRK-------LDEEYKERIAALKNELRQEREQILQQ 477
Cdd:PTZ00121 1039 DDVLKEKDIIDEDIDGNHEGKAEAKAHVgqDEGLKPSYKDFDFDAKEdnradeaTEEAFGKAEEAKKTETGKAEEARKAE 1118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 478 VGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLEnvlAEKFGDLDPSSAEFF 557
Cdd:PTZ00121 1119 EAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEA---ARKAEEVRKAEELRK 1195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 558 LQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVlRLPCQNALSEELDGHGDGIEQDQEPGSGECNPLNMSIEA 637
Cdd:PTZ00121 1196 AEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEA-KKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKA 1274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 638 ElviEQLKEQHHRDLCHLRLELEDKVRHYEKQLDHTRVACEKEQVA--MKQKYEQGMRTLEKqiSELQSEIADLQGQAAV 715
Cdd:PTZ00121 1275 E---EARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKAdeAKKKAEEAKKKADA--AKKKAEEAKKAAEAAK 1349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 716 LKEAHHKASCRHEEEKKQLQMVFDEEKTQLQEELRLEHEQELKA-RLQQAEESFRQEREGLAQAAAwTEEKARSLTRDLE 794
Cdd:PTZ00121 1350 AEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKAdEAKKKAEEDKKKADELKKAAA-AKKKADEAKKKAE 1428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 795 QSHQEQLLSLMEKHALEKEELRKELSEYHQRELQEGRYESEKLQEENSILRNEITtlneedsisnlKLEELNGSQEELWQ 874
Cdd:PTZ00121 1429 EKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAK-----------KADEAKKKAEEAKK 1497
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 875 KIETIeQEKASIQKMVEKLKKqVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKEDPGTCTSEKWEQEN 954
Cdd:PTZ00121 1498 KADEA-KKAAEAKKKADEAKK-AEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEED 1575
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 955 ESLK----EELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQLHRcpDLSDFQQKMCSILSYNENLL 1030
Cdd:PTZ00121 1576 KNMAlrkaEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKK--KVEQLKKKEAEEKKKAEELK 1653
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1031 KEKE---VLSEELKSCADKlaESSLLEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDLQ 1107
Cdd:PTZ00121 1654 KAEEenkIKAAEEAKKAEE--DKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIK 1731
|
....*...
gi 1958782432 1108 VTRQEKEA 1115
Cdd:PTZ00121 1732 AEEAKKEA 1739
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
812-1405 |
5.70e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 51.27 E-value: 5.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 812 KEELRKELSEY-HQ-RELQEGRYESEKLQEENSI-LRNEITTLN--------EEDSISNLKLEElNGSQEELwqkietie 880
Cdd:pfam15921 73 KEHIERVLEEYsHQvKDLQRRLNESNELHEKQKFyLRQSVIDLQtklqemqmERDAMADIRRRE-SQSQEDL-------- 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 881 qeKASIQKMVEKLKKQVSdlkLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKEDPGtctSEKWEQEN------ 954
Cdd:pfam15921 144 --RNQLQNTVHELEAAKC---LKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASG---KKIYEHDSmstmhf 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 955 ESLKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQEN-----LLLKDELERLKQL--HRCPDLSDFQQKMCSILSYNE 1027
Cdd:pfam15921 216 RSLGSAISKILRELDTEISYLKGRIFPVEDQLEALKSESqnkieLLLQQHQDRIEQLisEHEVEITGLTEKASSARSQAN 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1028 NLLKEKEVLSEELKScadklaESSLLEHRIATIkeereawEEQSQDLKSQLalsQEKVQNLEDILKNVNLQMAQIESDLQ 1107
Cdd:pfam15921 296 SIQSQLEIIQEQARN------QNSMYMRQLSDL-------ESTVSQLRSEL---REAKRMYEDKIEELEKQLVLANSELT 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1108 VTRQEKEALKQEVMSLHLQLQNAIDKdwVSETATHLSGLQGQQKRLsWNK-------LDHLMSEEPELlCQESKRLQTVV 1180
Cdd:pfam15921 360 EARTERDQFSQESGNLDDQLQKLLAD--LHKREKELSLEKEQNKRL-WDRdtgnsitIDHLRRELDDR-NMEVQRLEALL 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1181 QNTQADLTHSREkiRQLESnlLPTKHQKQLNQSCTVKPIEQEKLALKRECEQSRKER---SPTSRKVSQMS-SLERELET 1256
Cdd:pfam15921 436 KAMKSECQGQME--RQMAA--IQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKmtlESSERTVSDLTaSLQEKERA 511
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1257 IHLENEGLKKKQVRLDEKLMEMQPLRSAGTHSPSSHWDLQLLQQQACpmvprEQFLQLQQQLLQAEKRSQHLQEEldNRT 1336
Cdd:pfam15921 512 IEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALKLQMA-----EKDKVIEILRQQIENMTQLVGQH--GRT 584
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958782432 1337 SEPNTVQGSQehLVNLMEERMIEVeQKLKLVKRLLQEKVNQLkeqlcknsktDAMVKDLYVENAQLLKA 1405
Cdd:pfam15921 585 AGAMQVEKAQ--LEKEINDRRLEL-QEFKILKDKKDAKIREL----------EARVSDLELEKVKLVNA 640
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
362-1006 |
6.02e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 51.12 E-value: 6.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 362 SLDGNINLTELTLALENELLVTKNGIHQAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMAS--------- 432
Cdd:TIGR00618 191 SLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLlkqlrarie 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 433 EVDDHHAAIERRNE-YNLRKLDEEYKERIAALKnELRQEREQILQQVGKQRVELEQEIE------KAKTEENYIRDRLAL 505
Cdd:TIGR00618 271 ELRAQEAVLEETQErINRARKAAPLAAHIKAVT-QIEQQAQRIHTELQSKMRSRAKLLMkraahvKQQSSIEEQRRLLQT 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 506 SLKENNRLENELLENAEKLAEYENLTSKLQR------------SLENVLAEKFGDLD--PSSAEFFLQEERLAQMRNEYE 571
Cdd:TIGR00618 350 LHSQEIHIRDAHEVATSIREISCQQHTLTQHihtlqqqkttltQKLQSLCKELDILQreQATIDTRTSAFRDLQGQLAHA 429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 572 QQCRLLQDQVDELQSELEEYQAQGRVLRLPCQNALSEELDghgdgiEQDQEPGSGEcNPLNMSIEAELVIEQLKEQHHRD 651
Cdd:TIGR00618 430 KKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLK------EREQQLQTKE-QIHLQETRKKAVVLARLLELQEE 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 652 LChlrlELEDKVRHYEK---QLDHTRVACEKEQvAMKQKYEQGMRTLEKQISELQSE---IADLQGQAAVLKEAHHKASC 725
Cdd:TIGR00618 503 PC----PLCGSCIHPNParqDIDNPGPLTRRMQ-RGEQTYAQLETSEEDVYHQLTSErkqRASLKEQMQEIQQSFSILTQ 577
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 726 RHEEEKKQLQMVfdeekTQLQEELRLEHEQELKARLQQAEESFRQEREG-----LAQAAAWTEEKARSLTRDLEQSHQEQ 800
Cdd:TIGR00618 578 CDNRSKEDIPNL-----QNITVRLQDLTEKLSEAEDMLACEQHALLRKLqpeqdLQDVRLHLQQCSQELALKLTALHALQ 652
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 801 LLSLMEK---HALEKEELRKELSEYHQRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIE 877
Cdd:TIGR00618 653 LTLTQERvreHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGS 732
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 878 TIEQEKASIQKMVEKLKKQvSDLKLKNQQLDSENKELSQK-NSQNKEELKTLNQRLAEMLCQKEDPGTCTSEKWEQENES 956
Cdd:TIGR00618 733 DLAAREDALNQSLKELMHQ-ARTVLKARTEAHFNNNEEVTaALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQE 811
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|
gi 1958782432 957 LKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQL 1006
Cdd:TIGR00618 812 IPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQL 861
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
496-1142 |
6.35e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 50.99 E-value: 6.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 496 ENYIRDRLALSLKENNRLENELLENAEKlaEYENLTSKLQRSlenvlaeKFGDLDPSSAEFFLQEERlAQMRNEYEQQCR 575
Cdd:pfam12128 224 EHWIRDIQAIAGIMKIRPEFTKLQQEFN--TLESAELRLSHL-------HFGYKSDETLIASRQEER-QETSAELNQLLR 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 576 LLQDQVDELQSELEE---------YQAQGRVLRLPCQNALSEELDGHGDGIEQDQEPG-SGECNPLNMSIEAEL-VIEQL 644
Cdd:pfam12128 294 TLDDQWKEKRDELNGelsaadaavAKDRSELEALEDQHGAFLDADIETAAADQEQLPSwQSELENLEERLKALTgKHQDV 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 645 KEQHHRDLCHLRLELEDKVRHYEKQLDHTRVACEKEQVAMKqkyeqgmrtlekqiselqseiADLQGQAAVLKEAHHKAS 724
Cdd:pfam12128 374 TAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQLAVAE---------------------DDLQALESELREQLEAGK 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 725 CRHEEEKKQLQMVFDEEKTQL-------QEELRLEHEQELKARLQQAEESFRQEREGLAQAaawtEEKARSLtRDLEQSH 797
Cdd:pfam12128 433 LEFNEEEYRLKSRLGELKLRLnqatatpELLLQLENFDERIERAREEQEAANAEVERLQSE----LRQARKR-RDQASEA 507
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 798 QEQLLSLMEKHALEKEELRKELS-------EYHQRELQEGRYESEKLQEENSILRNEITTLNEEDSIS--------NLKL 862
Cdd:pfam12128 508 LRQASRRLEERQSALDELELQLFpqagtllHFLRKEAPDWEQSIGKVISPELLHRTDLDPEVWDGSVGgelnlygvKLDL 587
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 863 EELN-----GSQEELWQKIETIEQekaSIQKMVEKLKKQVSDLKLKNQQLDSENKELS---QKNSQNKEELKTLNQRLAE 934
Cdd:pfam12128 588 KRIDvpewaASEEELRERLDKAEE---ALQSAREKQAAAEEQLVQANGELEKASREETfarTALKNARLDLRRLFDEKQS 664
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 935 MLCQKEDPGTCTSEKWEQENESLKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQENL-LLKDELERLKQ-LHRCPDL 1012
Cdd:pfam12128 665 EKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQVVEgALDAQLALLKAaIAARRSG 744
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1013 SDFQQKMCSilSYNENLLKEKEV-------LSEELKSCADKLAESSLLEHRIATIKE-EREAWEEQSQDLKSQLALSQEK 1084
Cdd:pfam12128 745 AKAELKALE--TWYKRDLASLGVdpdviakLKREIRTLERKIERIAVRRQEVLRYFDwYQETWLQRRPRLATQLSNIERA 822
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958782432 1085 VQNLEDILK----NVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQ--NAIDKDWVSETATH 1142
Cdd:pfam12128 823 ISELQQQLArliaDTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSklATLKEDANSEQAQG 886
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
411-902 |
7.41e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.54 E-value: 7.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 411 REKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEYnlrkldEEYKERIAALKNELRQEREQILQQvgKQRVELEQEIE 490
Cdd:COG4717 64 RKPELNLKELKELEEELKEAEEKEEEYAELQEELEEL------EEELEELEAELEELREELEKLEKL--LQLLPLYQELE 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 491 KAKTEENYIRDRLalslkenNRLENELLENAEKLAEYENLTSKLQRsLENVLAEKFGDLDPSSAEfflQEERLAQMRNEY 570
Cdd:COG4717 136 ALEAELAELPERL-------EELEERLEELRELEEELEELEAELAE-LQEELEELLEQLSLATEE---ELQDLAEELEEL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 571 EQQCRLLQDQVDELQSELEEYQAQGRVLRLPCQNALSEELDGHGD-------GIEQDQEPGSGECNPLNMSIEAELVIEQ 643
Cdd:COG4717 205 QQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARlllliaaALLALLGLGGSLLSLILTIAGVLFLVLG 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 644 LkeqhhrdLCHLRLELEDKVRHYEKQLDHTRVACEKEQVAmKQKYEQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKA 723
Cdd:COG4717 285 L-------LALLFLLLAREKASLGKEAEELQALPALEELE-EEELEELLAALGLPPDLSPEELLELLDRIEELQELLREA 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 724 ScrhEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEEsfRQEreglaqaaawTEEKARSLTRDLEQSHQEQLLS 803
Cdd:COG4717 357 E---ELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEE--YQE----------LKEELEELEEQLEELLGELEEL 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 804 LmekHALEKEELRKELSEYhQRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEelngsQEELWQKIETIEQEK 883
Cdd:COG4717 422 L---EALDEEELEEELEEL-EEELEELEEELEELREELAELEAELEQLEEDGELAELLQE-----LEELKAELRELAEEW 492
|
490 500
....*....|....*....|..
gi 1958782432 884 ASIQ---KMVEKLKKQVSDLKL 902
Cdd:COG4717 493 AALKlalELLEEAREEYREERL 514
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
728-1267 |
7.92e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 50.49 E-value: 7.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 728 EEEKKQLQ-MVFDEEKTQLqeelRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQSHQ--EQLLSL 804
Cdd:pfam05483 116 EAQRKAIQeLQFENEKVSL----KLEEEIQENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYEREETRQvyMDLNNN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 805 MEKHALEKEELRKELSEYHQRELQEGRYESEKLQEENSILRNEIttlNEEDSISNLKLEELNGSQEELWQKIETIEQEKA 884
Cdd:pfam05483 192 IEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKKEI---NDKEKQVSLLLIQITEKENKMKDLTFLLEESRD 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 885 SIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTlnqrlAEMLCQKEDPGTCTSEKWEQENESLKEELDRY 964
Cdd:pfam05483 269 KANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMST-----QKALEEDLQIATKTICQLTEEKEAQMEELNKA 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 965 KVQTSTLVSSLEAELSEVKLqthiveqenlLLKDELERLKQLHRCPDLSDFQ-QKMCSILSYNENLLKEKEVLSEELKSC 1043
Cdd:pfam05483 344 KAAHSFVVTEFEATTCSLEE----------LLRTEQQRLEKNEDQLKIITMElQKKSSELEEMTKFKNNKEVELEELKKI 413
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1044 adkLAESSLLEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDLQ--VTRQEKEALKQEVM 1121
Cdd:pfam05483 414 ---LAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEdlKTELEKEKLKNIEL 490
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1122 SLHLQLQNAIDKDWVSETATHLSGLQGQQKRLSWNKldhlmsEEPELLCQESKRLQTVVQNTQADLTHSREKIRQLESNL 1201
Cdd:pfam05483 491 TAHCDKLLLENKELTQEASDMTLELKKHQEDIINCK------KQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEV 564
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958782432 1202 ---LPTKHQKQLNQSCTVKPIEQEKLALKRECEQSRKersptsrkvsQMSSLERELETIHLENEGLKKK 1267
Cdd:pfam05483 565 kckLDKSEENARSIEYEVLKKEKQMKILENKCNNLKK----------QIENKNKNIEELHQENKALKKK 623
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1053-1279 |
1.24e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.38 E-value: 1.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1053 LEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQNAID 1132
Cdd:COG4942 32 LQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLR 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1133 KDWVSETATHLSGLqgqqkrlswnkldhLMSEEPELLCQESKRLQTVVQNTQADLTHSREKIRQLEsnllpTKHQKQLNQ 1212
Cdd:COG4942 112 ALYRLGRQPPLALL--------------LSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELA-----ALRAELEAE 172
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958782432 1213 SCTVKPIEQEKLALKRECEQSRKERSptsrkvSQMSSLERELETIHLENEGLKKKQVRLDEKLMEMQ 1279
Cdd:COG4942 173 RAELEALLAELEEERAALEALKAERQ------KLLARLEKELAELAAELAELQQEAEELEALIARLE 233
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
337-535 |
1.28e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 49.63 E-value: 1.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 337 VERILDTWQEEGIE-NSQEILKALDFsLDGNINLTELTL-ALENELLVTKNgihQAALASFKAEIRHLLERVDQVVREKE 414
Cdd:COG3206 154 ANALAEAYLEQNLElRREEARKALEF-LEEQLPELRKELeEAEAALEEFRQ---KNGLVDLSEEAKLLLQQLSELESQLA 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 415 KLRSDLDKAE----------KLKSLMASEVDDHHAAIERRNEYN-----LRKLDEEYKE---RIAALKNELRQEREQILQ 476
Cdd:COG3206 230 EARAELAEAEarlaalraqlGSGPDALPELLQSPVIQQLRAQLAeleaeLAELSARYTPnhpDVIALRAQIAALRAQLQQ 309
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1958782432 477 QVGKQRVELEQEIEKAKTEENYIRDRLAlslkennRLENELLENAEKLAEYENLTSKLQ 535
Cdd:COG3206 310 EAQRILASLEAELEALQAREASLQAQLA-------QLEARLAELPELEAELRRLEREVE 361
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
726-1001 |
1.31e-05 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 49.75 E-value: 1.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 726 RHEEEKKQLQmvfdeeKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLT----RDLEQS---HQ 798
Cdd:pfam07111 77 RLEEEVRLLR------ETSLQQKMRLEAQAMELDALAVAEKAGQAEAEGLRAALAGAEMVRKNLEegsqRELEEIqrlHQ 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 799 EQLLSLMEKH-------ALEKEELRKELSEYHQRELQEGRYESEKlQEENSILRNEITTLNEEDSISNLKLEELN---GS 868
Cdd:pfam07111 151 EQLSSLTQAHeealsslTSKAEGLEKSLNSLETKRAGEAKQLAEA-QKEAELLRKQLSKTQEELEAQVTLVESLRkyvGE 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 869 QEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMlcQKEDPGTCTS- 947
Cdd:pfam07111 230 QVPPEVHSQTWELERQELLDTMQHLQEDRADLQATVELLQVRVQSLTHMLALQEEELTRKIQPSDSL--EPEFPKKCRSl 307
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1958782432 948 -EKWEQENESLKEELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELE 1001
Cdd:pfam07111 308 lNRWREKVFALMVQLKAQDLEHRDSVKQLRGQVAELQEQVTSQSQEQAILQRALQ 362
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
641-1275 |
2.88e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 49.07 E-value: 2.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 641 IEQLKEQHHRdLCHLRLELEDKVRHYEKQLdhtrvaceKEQVAMKQKYEQGMRTLEKQISELqseIADLQGQAAVLKEAh 720
Cdd:pfam12128 250 FNTLESAELR-LSHLHFGYKSDETLIASRQ--------EERQETSAELNQLLRTLDDQWKEK---RDELNGELSAADAA- 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 721 hKASCRHEEEkkqlqmVFDEEKTQLQEElrlehEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQSHQEQ 800
Cdd:pfam12128 317 -VAKDRSELE------ALEDQHGAFLDA-----DIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKI 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 801 LLSLMEKHALEKEELRKeLSEYHQRELQEGRYESEKLQEE-NSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETI 879
Cdd:pfam12128 385 KEQNNRDIAGIKDKLAK-IREARDRQLAVAEDDLQALESElREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATATPELL 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 880 EQEKAS---IQKMVEKLK---KQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEmLCQKEDPGTCT------- 946
Cdd:pfam12128 464 LQLENFderIERAREEQEaanAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDE-LELQLFPQAGTllhflrk 542
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 947 -SEKWEQENESL--KEELDRYKVQTSTLVSSLEAELS--EVKLQTHIVE-QENLLLKDELE-RLKQLHRcpDLSDFQQKM 1019
Cdd:pfam12128 543 eAPDWEQSIGKVisPELLHRTDLDPEVWDGSVGGELNlyGVKLDLKRIDvPEWAASEEELReRLDKAEE--ALQSAREKQ 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1020 CSILSYNENLLKEKEVLSEELKSCADKLAESSLLEHRIATIKEEREAWEEQSqdLKSQLALSQEKVQNLEDILKNVNLQ- 1098
Cdd:pfam12128 621 AAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKA--LAERKDSANERLNSLEAQLKQLDKKh 698
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1099 ---MAQIESDLQVTRQEKEALKQEVMSLH----LQLQNAIDKDWVSETAtHLSGLQGQQKRlswnKLDHLMSEEPEL--L 1169
Cdd:pfam12128 699 qawLEEQKEQKREARTEKQAYWQVVEGALdaqlALLKAAIAARRSGAKA-ELKALETWYKR----DLASLGVDPDVIakL 773
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1170 CQESKRLQTVVQNTQADlthsREKIRQLESNLLPTKHQKQLNQSCTVKPIEQEKLALKRECEQsrkersptsrkvsQMSS 1249
Cdd:pfam12128 774 KREIRTLERKIERIAVR----RQEVLRYFDWYQETWLQRRPRLATQLSNIERAISELQQQLAR-------------LIAD 836
|
650 660
....*....|....*....|....*.
gi 1958782432 1250 LERELETIHLENEGLKKKQVRLDEKL 1275
Cdd:pfam12128 837 TKLRRAKLEMERKASEKQQVRLSENL 862
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
833-1433 |
5.97e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 47.59 E-value: 5.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 833 ESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENK 912
Cdd:PRK01156 160 EINSLERNYDKLKDVIDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKS 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 913 ELSQKNSQnKEELKTLNQRLAEMLCQKEDPgtctsekwEQENESLKEELDRYKVQTSTLVSSLEAELSE-VKLQTHIVEQ 991
Cdd:PRK01156 240 ALNELSSL-EDMKNRYESEIKTAESDLSME--------LEKNNYYKELEERHMKIINDPVYKNRNYINDyFKYKNDIENK 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 992 ENLL--LKDELERLKQLHRcpDLSDFQQkmcsilSYNENLLKEKEVlsEELKSCADKLAESSL--------LEHRIATIK 1061
Cdd:PRK01156 311 KQILsnIDAEINKYHAIIK--KLSVLQK------DYNDYIKKKSRY--DDLNNQILELEGYEMdynsylksIESLKKKIE 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1062 EEREAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQNAIDKDWVSETAT 1141
Cdd:PRK01156 381 EYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVCPVCGT 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1142 HLSGlqgqqkrlswNKLDHLMSEEPEllcqESKRLQTVVQNTQADLTHSREKIRQLESnllptkhqkqlnqsctvkpieq 1221
Cdd:PRK01156 461 TLGE----------EKSNHIINHYNE----KKSRLEEKIREIEIEVKDIDEKIVDLKK---------------------- 504
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1222 eklaLKRECEQSRKERSPTSRKvsQMSSLERELETIHLENEGLKKKQVRLDEKLMEMQPLRSAGTHSPSSHWDLQLLQQQ 1301
Cdd:PRK01156 505 ----RKEYLESEEINKSINEYN--KIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTSWLNALAVIS 578
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1302 ACPM-VPREQFLQLQQQLLQAEKRSQHLQEELDNRTSEPNTVQGSQEHLVNLMEERMIEVEQKlKLVKRLLQEKVNQLKE 1380
Cdd:PRK01156 579 LIDIeTNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQEN-KILIEKLRGKIDNYKK 657
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 1958782432 1381 QLcknSKTDAMVKDLYVENAQLLKALEMTEQRQKTAEKKNFLLEEKIASLSTI 1433
Cdd:PRK01156 658 QI---AEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEIL 707
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
559-1005 |
6.45e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.45 E-value: 6.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 559 QEERLAQMRNEYEQqCRLLQDQVDELQSELEEYQAQGRVLRLPcQNALSEELDGHGDGIEQDQepgsgecnplnmsIEAE 638
Cdd:COG4717 76 LEEELKEAEEKEEE-YAELQEELEELEEELEELEAELEELREE-LEKLEKLLQLLPLYQELEA-------------LEAE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 639 LVIEQLKEQHHRDLCHLRLELEDKVRHYEKQLDHTRVACEKEQVAMKQKYEQGMRTLEKQISELQSEIADLQGQAAVLKE 718
Cdd:COG4717 141 LAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQE 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 719 AHHKAscrheeekkqlqmvfDEEKTQLQEELRLEHEQElkaRLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQSHQ 798
Cdd:COG4717 221 ELEEL---------------EEELEQLENELEAAALEE---RLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLV 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 799 EQLLSLMEKHAlekeeLRKELSEYHQRELQEGRYESEKLQEENsiLRNEITTLNEEDSISNLKLEELNGSQEELWQKIET 878
Cdd:COG4717 283 LGLLALLFLLL-----AREKASLGKEAEELQALPALEELEEEE--LEELLAALGLPPDLSPEELLELLDRIEELQELLRE 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 879 IEQEKASIQkmVEKLKKQVSDLkLKNQQLDSENK-----ELSQKNSQNKEELKTLNQRLAEMLCQ-KEDPGTCTSEKWEQ 952
Cdd:COG4717 356 AEELEEELQ--LEELEQEIAAL-LAEAGVEDEEElraalEQAEEYQELKEELEELEEQLEELLGElEELLEALDEEELEE 432
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 1958782432 953 ENESLKEELDRYKVQtstlVSSLEAELSEVKLQTHIVEQENLL--LKDELERLKQ 1005
Cdd:COG4717 433 ELEELEEELEELEEE----LEELREELAELEAELEQLEEDGELaeLLQELEELKA 483
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
558-807 |
8.39e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 47.32 E-value: 8.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 558 LQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPCQ-NALSEELDghgdgieqdqepgsgecnplnmSIE 636
Cdd:COG3206 168 LRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLVDLSEEaKLLLQQLS----------------------ELE 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 637 AELVieQLKEQhhrdlchlRLELEDKVRHYEKQLDhtrvacEKEQVAMKQKYEQGMRTLEKQISELQSEIADLQgqaAVL 716
Cdd:COG3206 226 SQLA--EARAE--------LAEAEARLAALRAQLG------SGPDALPELLQSPVIQQLRAQLAELEAELAELS---ARY 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 717 KEAHHKAScRHEEEKKQLQMVFDEEKTQLQEELRLEhEQELKARLQQAEESFRQEREGLAQAAAwTEEKARSLTRDLEqS 796
Cdd:COG3206 287 TPNHPDVI-ALRAQIAALRAQLQQEAQRILASLEAE-LEALQAREASLQAQLAQLEARLAELPE-LEAELRRLEREVE-V 362
|
250
....*....|.
gi 1958782432 797 HQEQLLSLMEK 807
Cdd:COG3206 363 ARELYESLLQR 373
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
727-1200 |
9.84e-05 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 47.04 E-value: 9.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 727 HEEEKKQLQMVFDEEKTQLQEELrlEHEQELKARLQQaeesfRQEREGLAQAAAWTE-EKARSLTRDLEQSHQ---EQLL 802
Cdd:pfam05557 25 HKRARIELEKKASALKRQLDRES--DRNQELQKRIRL-----LEKREAEAEEALREQaELNRLKKKYLEALNKklnEKES 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 803 SLMEKHALeKEELRKELSEYHQR------ELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQE---ELW 873
Cdd:pfam05557 98 QLADAREV-ISCLKNELSELRRQiqraelELQSTNSELEELQERLDLLKAKASEAEQLRQNLEKQQSSLAEAEQrikELE 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 874 QKIETIEQEKASIQKMVEKLkKQVSDLKLKNQQLDSENKELSQKNSQN---KEELKTLNQRLAEMLCQKEDPGTCtsekw 950
Cdd:pfam05557 177 FEIQSQEQDSEIVKNSKSEL-ARIPELEKELERLREHNKHLNENIENKlllKEEVEDLKRKLEREEKYREEAATL----- 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 951 EQENESLKEELDRY-KVQTSTLVSSLEAELSEVKLQThiVEQENLLLKDEL----ERLKQLHRcpDLSDFQQKmcsILSY 1025
Cdd:pfam05557 251 ELEKEKLEQELQSWvKLAQDTGLNLRSPEDLSRRIEQ--LQQREIVLKEENssltSSARQLEK--ARRELEQE---LAQY 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1026 NENLLKEKEVLsEELKSCADKlaesslLEHRIATIKEEREAWEEQSQDLKSQLALSQ------EKVQNLEDILKNVNLQM 1099
Cdd:pfam05557 324 LKKIEDLNKKL-KRHKALVRR------LQRRVLLLTKERDGYRAILESYDKELTMSNyspqllERIEEAEDMTQKMQAHN 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1100 AQIESDLQVTRQEKEALKQEVMSLHLQLQNAIDKDWVSETATHLSGLQGQQKrlswnKLDHLMSEEPELLCQ-ESKRLQT 1178
Cdd:pfam05557 397 EEMEAQLSVAEEELGGYKQQAQTLERELQALRQQESLADPSYSKEEVDSLRR-----KLETLELERQRLREQkNELEMEL 471
|
490 500
....*....|....*....|..
gi 1958782432 1179 VVQNTQADLTHSREKIRQLESN 1200
Cdd:pfam05557 472 ERRCLQGDYDPKKTKVLHLSMN 493
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
389-590 |
1.38e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.91 E-value: 1.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 389 QAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEyNLRKLdeeyKERIAALKNELR 468
Cdd:COG4942 26 EAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEA-ELAEL----EKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 469 QEREQILQQVGKQ-----------------------RVELEQEIEKAKTEEnyiRDRLALSLKENNRLENELLENAEKLA 525
Cdd:COG4942 101 AQKEELAELLRALyrlgrqpplalllspedfldavrRLQYLKYLAPARREQ---AEELRADLAELAALRAELEAERAELE 177
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958782432 526 EYENLTSKLQRSLENVLAEKFGDLDPSSAEFFLQEERLAQMRNEYEQqcrlLQDQVDELQSELEE 590
Cdd:COG4942 178 ALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEE----LEALIARLEAEAAA 238
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
434-800 |
1.81e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 46.27 E-value: 1.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 434 VDDHHAAIERRNEYNLRKLDEEykeriaalknELRQEREQILQQVGKQRveleqEIEKAKTEENYIRDRLALSLKENNRL 513
Cdd:pfam17380 278 VQHQKAVSERQQQEKFEKMEQE----------RLRQEKEEKAREVERRR-----KLEEAEKARQAEMDRQAAIYAEQERM 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 514 ENELLENAEKLAEYENltsklQRSLENVLAEKFG-DLDPSSAEFFLQEERlaQMRNEYEQQ----CRLLQDQVDELQSEL 588
Cdd:pfam17380 343 AMERERELERIRQEER-----KRELERIRQEEIAmEISRMRELERLQMER--QQKNERVRQeleaARKVKILEEERQRKI 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 589 EEYQAQGRVLRLPCQNALSEELdghgdgieqdqepgsgecnplnmsieaelviEQLKEQHHRDLCHLRLELEDK------ 662
Cdd:pfam17380 416 QQQKVEMEQIRAEQEEARQREV-------------------------------RRLEEERAREMERVRLEEQERqqqver 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 663 VRHYEKQLDHTRVACEKEQVAMKQKYEQGMRTLEKQISElqseiadlqGQAAVLKEAHHKASCRHEEEKKQLQMVFDEEK 742
Cdd:pfam17380 465 LRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEE---------RKQAMIEEERKRKLLEKEMEERQKAIYEEERR 535
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1958782432 743 TQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAaawteEKARSLTRDLEQSHQEQ 800
Cdd:pfam17380 536 REAEEERRKQQEMEERRRIQEQMRKATEERSRLEAM-----EREREMMRQIVESEKAR 588
|
|
| Spc7 |
smart00787 |
Spc7 kinetochore protein; This domain is found in cell division proteins which are required ... |
731-910 |
1.92e-04 |
|
Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.
Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 45.39 E-value: 1.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 731 KKQLQMVFDEEKTQLQE---ELRLEHEQELKARLQQAEESFRQEREGLAQaaawTEEKARSLTRDLEQSHQeqllSLMEK 807
Cdd:smart00787 116 DKQFQLVKTFARLEAKKmwyEWRMKLLEGLKEGLDENLEGLKEDYKLLMK----ELELLNSIKPKLRDRKD----ALEEE 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 808 HALEKEeLRKELSEYHQRELQEGRYESEKLQEENSILRNEITTLNEEdsisnlkLEELNGSQEELWQKIETIEQEKASIQ 887
Cdd:smart00787 188 LRQLKQ-LEDELEDCDPTELDRAKEKLKKLLQEIMIKVKKLEELEEE-------LQELESKIEDLTNKKSELNTEIAEAE 259
|
170 180
....*....|....*....|....*..
gi 1958782432 888 KMVEKLK----KQVSDLKLKNQQLDSE 910
Cdd:smart00787 260 KKLEQCRgftfKEIEKLKEQLKLLQSL 286
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
685-935 |
2.16e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.21 E-value: 2.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 685 KQKYEQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKAScrheeekkqlqmvfdEEKTQLQEELrleheQELKARLQQA 764
Cdd:COG3883 18 IQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQ---------------AELEALQAEI-----DKLQAEIAEA 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 765 EESFRQEREGLAQAAAWTEEKARSLtrdleqSHQEQLL---SLMEkhALEKEELRKELSEYHQRELQEGRYESEKLQEEN 841
Cdd:COG3883 78 EAEIEERREELGERARALYRSGGSV------SYLDVLLgseSFSD--FLDRLSALSKIADADADLLEELKADKAELEAKK 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 842 SILRNeittlneedsisnlKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQN 921
Cdd:COG3883 150 AELEA--------------KLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAA 215
|
250
....*....|....
gi 1958782432 922 KEELKTLNQRLAEM 935
Cdd:COG3883 216 AAAAAAAAAAAAAA 229
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
835-1087 |
2.27e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 46.05 E-value: 2.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 835 EKLQEENSILR-----NEITTLNEED--SISNLKLEELNGSQEELWQKIETIEQEkASIQ-----KMVEKLKKQVSDL-K 901
Cdd:PLN02939 71 ENGQLENTSLRtvmelPQKSTSSDDDhnRASMQRDEAIAAIDNEQQTNSKDGEQL-SDFQledlvGMIQNAEKNILLLnQ 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 902 LKNQQLDSENKELSQKNSQNKEeLKTLNQRLAE-----MLCQKEDPGTctsEKWEQENESLKEELDRYKVQTSTLVSSLE 976
Cdd:PLN02939 150 ARLQALEDLEKILTEKEALQGK-INILEMRLSEtdariKLAAQEKIHV---EILEEQLEKLRNELLIRGATEGLCVHSLS 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 977 AELSEVKLqthiveqENLLLKDELERLKQlhrcpDLSDFQQKMCSILSynenLLKEKEVLSEELKSCADKLAESSLLEHR 1056
Cdd:PLN02939 226 KELDVLKE-------ENMLLKDDIQFLKA-----ELIEVAETEERVFK----LEKERSLLDASLRELESKFIVAQEDVSK 289
|
250 260 270
....*....|....*....|....*....|.
gi 1958782432 1057 IATIKEerEAWEEQSQDLKSQLALSQEKVQN 1087
Cdd:PLN02939 290 LSPLQY--DCWWEKVENLQDLLDRATNQVEK 318
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
811-1001 |
2.42e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 45.28 E-value: 2.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 811 EKEELRKELSEYhQRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMV 890
Cdd:COG4372 39 ELDKLQEELEQL-REELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEEL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 891 EKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKEDPGTCTSEKWEQENESLKEELDRYKVQTST 970
Cdd:COG4372 118 EELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDELLKEANRNAE 197
|
170 180 190
....*....|....*....|....*....|.
gi 1958782432 971 LVSSLEAELSEVKLQTHIVEQENLLLKDELE 1001
Cdd:COG4372 198 KEEELAEAEKLIESLPRELAEELLEAKDSLE 228
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
747-1050 |
2.47e-04 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 45.62 E-value: 2.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 747 EELRLEHE-QELKARLQQAEESFRQEREGLaqaaawTEEKARSLTRDLEQSHQEQLLS--LMEKHALEKEELRKELSEYH 823
Cdd:PLN03229 430 PVRELEGEvEKLKEQILKAKESSSKPSELA------LNEMIEKLKKEIDLEYTEAVIAmgLQERLENLREEFSKANSQDQ 503
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 824 --QRELQEgryESEKLQEENSI----------LRNEITTLNEedsISNLK-LEELNGSQEELWQKIETIEQE---KASIQ 887
Cdd:PLN03229 504 lmHPVLME---KIEKLKDEFNKrlsrapnylsLKYKLDMLNE---FSRAKaLSEKKSKAEKLKAEINKKFKEvmdRPEIK 577
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 888 KMVEKLKKQVSDLKLKNQqlDSENKELSQKNSQNKEE--------LKTLNQRLAEMLCQKEDPGTCTSEKWEQEN-ESLK 958
Cdd:PLN03229 578 EKMEALKAEVASSGASSG--DELDDDLKEKVEKMKKEielelagvLKSMGLEVIGVTKKNKDTAEQTPPPNLQEKiESLN 655
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 959 EELDRyKVQTSTLVSSLEAELSEVKLQTHIVEQ-ENLLLKDELERLKQlhrcpdlsDFQQKMCSILSYNEnlLKEK-EVL 1036
Cdd:PLN03229 656 EEINK-KIERVIRSSDLKSKIELLKLEVAKASKtPDVTEKEKIEALEQ--------QIKQKIAEALNSSE--LKEKfEEL 724
|
330
....*....|....
gi 1958782432 1037 SEELKSCADKLAES 1050
Cdd:PLN03229 725 EAELAAARETAAES 738
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
739-1116 |
2.81e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 45.42 E-value: 2.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 739 DEEKTQLQEEL-RLEHE-QELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRdLEQSHQEQLLSLMEKHALEKEelR 816
Cdd:PRK02224 198 EKEEKDLHERLnGLESElAELDEEIERYEEQREQARETRDEADEVLEEHEERREE-LETLEAEIEDLRETIAETERE--R 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 817 KELSEyhqrELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQ 896
Cdd:PRK02224 275 EELAE----EVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLRED 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 897 VSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKED------PGTCTSEKWEQENESLKEELDRYKVQtst 970
Cdd:PRK02224 351 ADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEElrerfgDAPVDLGNAEDFLEELREERDELRER--- 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 971 lVSSLEAELSEVklQTHIVEQENLL--------------------LKDELERLKQLHRcpDLSDFQQKMCSILSYNENL- 1029
Cdd:PRK02224 428 -EAELEATLRTA--RERVEEAEALLeagkcpecgqpvegsphvetIEEDRERVEELEA--ELEDLEEEVEEVEERLERAe 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1030 -LKEKEVLSEELKSCADKLAEssLLEHRIATIKEEREAWE---EQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESD 1105
Cdd:PRK02224 503 dLVEAEDRIERLEERREDLEE--LIAERRETIEEKRERAEelrERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSK 580
|
410
....*....|.
gi 1958782432 1106 LQVTRQEKEAL 1116
Cdd:PRK02224 581 LAELKERIESL 591
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
467-1365 |
3.39e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 45.42 E-value: 3.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 467 LRQEREQILQQVGKQRVELeQEIEKAKTEENYIRDRL-------ALSLKENNRLENELLENAEKLAEYENLTSKLQRSLE 539
Cdd:TIGR00606 191 LRQVRQTQGQKVQEHQMEL-KYLKQYKEKACEIRDQItskeaqlESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDN 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 540 NVLAEKFGDLDPSSAEFFLQEERLAQMRNEYEQqcrlLQDQVDELQSELEEYQAQgrvlRLPCQNALSEEldgHGDGIEQ 619
Cdd:TIGR00606 270 EIKALKSRKKQMEKDNSELELKMEKVFQGTDEQ----LNDLYHNHQRTVREKERE----LVDCQRELEKL---NKERRLL 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 620 DQEPGSGECNPLNMSIEAELVIEQLKEqhhRDLCHLRLELEDKVRHYEKQLDHTRvACEKEQVAMKQKYEQGMRTLEKQI 699
Cdd:TIGR00606 339 NQEKTELLVEQGRLQLQADRHQEHIRA---RDSLIQSLATRLELDGFERGPFSER-QIKNFHTLVIERQEDEAKTAAQLC 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 700 SELQSEIADLQGQAAVLkeahhkascrhEEEKKQLQMVFDEEKTQLQEELrlEHEQELKARLQQAEESFRqereglaqaa 779
Cdd:TIGR00606 415 ADLQSKERLKQEQADEI-----------RDEKKGLGRTIELKKEILEKKQ--EELKFVIKELQQLEGSSD---------- 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 780 awteekaRSLTRDLEQSHQEQLLSLMEKHALEKEELRKELseYHQRELQEGRYESEKLQEENSILRNEITTLNEEDSISN 859
Cdd:TIGR00606 472 -------RILELDQELRKAERELSKAEKNSLTETLKKEVK--SLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTK 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 860 LKLEELNGSQEELWQKIETIEQEKASI--QKMVEK-LKKQVSDLKLKNQQLDSENKELsQKNSQNKEELKTLNQRLAEML 936
Cdd:TIGR00606 543 DKMDKDEQIRKIKSRHSDELTSLLGYFpnKKQLEDwLHSKSKEINQTRDRLAKLNKEL-ASLEQNKNHINNELESKEEQL 621
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 937 CQKEDP--GTCTSEKWEQENESLKEELDRYKVQTSTL---------------------------VSSLEAELSEVKLQth 987
Cdd:TIGR00606 622 SSYEDKlfDVCGSQDEESDLERLKEEIEKSSKQRAMLagatavysqfitqltdenqsccpvcqrVFQTEAELQEFISD-- 699
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 988 iVEQENLLLKDELERLKQLHRCPDLSDFQQKMCSILSYNENLLKEKEV--LSEELKSCADKLAESSLLEHRIATIKEERE 1065
Cdd:TIGR00606 700 -LQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIpeLRNKLQKVNRDIQRLKNDIEEQETLLGTIM 778
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1066 AWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIES-DLQVTRQEkeaLKQEVMSLHLQLQNAIDKdwvSETATHLS 1144
Cdd:TIGR00606 779 PEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGsDLDRTVQQ---VNQEKQEKQHELDTVVSK---IELNRKLI 852
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1145 GLQGQQKRLSWNKLDHLMSEEPEL---------LCQESKRLQTVVQNTQADLTHSREKIRQLESNL--LPTKHQKQLNQS 1213
Cdd:TIGR00606 853 QDQQEQIQHLKSKTNELKSEKLQIgtnlqrrqqFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLekDQQEKEELISSK 932
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1214 CTVKPIEQEKLA-LKRECEQSRKERSPTSRKVS-----QMSSLERELETIHLENEGLKKKQVRLDEKLmemqplRSAGTH 1287
Cdd:TIGR00606 933 ETSNKKAQDKVNdIKEKVKNIHGYMKDIENKIQdgkddYLKQKETELNTVNAQLEECEKHQEKINEDM------RLMRQD 1006
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1288 SPSSHWDLQLLQQQACPMVPREQFLQLQQQLLQAEKR------------SQHLQEELDNRTSEPNTVQGSQEHlvnlMEE 1355
Cdd:TIGR00606 1007 IDTQKIQERWLQDNLTLRKRENELKEVEEELKQHLKEmgqmqvlqmkqeHQKLEENIDLIKRNHVLALGRQKG----YEK 1082
|
970
....*....|
gi 1958782432 1356 RMIEVEQKLK 1365
Cdd:TIGR00606 1083 EIKHFKKELR 1092
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
803-925 |
4.02e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 44.77 E-value: 4.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 803 SLMEKHALEKEELRKELSEYHQRELQEGRYESE-KLQEENSILRNEIttlnEEDSisNLKLEELNGSQEELWQKIETIEQ 881
Cdd:PRK12704 27 KIAEAKIKEAEEEAKRILEEAKKEAEAIKKEALlEAKEEIHKLRNEF----EKEL--RERRNELQKLEKRLLQKEENLDR 100
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1958782432 882 EKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEEL 925
Cdd:PRK12704 101 KLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQEL 144
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
957-1237 |
4.73e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 44.93 E-value: 4.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 957 LKEELDRYKVQTSTL--------VSSLEAELSEVKLQTHIVEQENLLLKDELERLKQlhrcpDLSDFQQKMCSILSYNEN 1028
Cdd:COG1196 218 LKEELKELEAELLLLklreleaeLEELEAELEELEAELEELEAELAELEAELEELRL-----ELEELELELEEAQAEEYE 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1029 LLKEKEVLSEELKSCADKLAEsslLEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDLQV 1108
Cdd:COG1196 293 LLAELARLEQDIARLEERRRE---LEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLE 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1109 TRQEKEALKQEVMSLHLQLQNAIDKdwVSETATHLSGLQGQQKRLSwNKLDHLMSEEPELLcQESKRLQTVVQNTQADLT 1188
Cdd:COG1196 370 AEAELAEAEEELEELAEELLEALRA--AAELAAQLEELEEAEEALL-ERLERLEEELEELE-EALAELEEEEEEEEEALE 445
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1958782432 1189 HSREKIRQLESNLLptKHQKQLNQSCTVKPIEQEKLALKRECEQSRKER 1237
Cdd:COG1196 446 EAAEEEAELEEEEE--ALLELLAELLEEAALLEAALAELLEELAEAAAR 492
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
465-1198 |
4.91e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 45.04 E-value: 4.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 465 NELRQEREQILQQVGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLENVLAE 544
Cdd:TIGR00606 304 NDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFE 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 545 KFGDLDPSSAEFF-LQEERL-------AQMRNEYEQQCRLLQDQVDELQSE--------------LEEYQAQGRVLRLPC 602
Cdd:TIGR00606 384 RGPFSERQIKNFHtLVIERQedeaktaAQLCADLQSKERLKQEQADEIRDEkkglgrtielkkeiLEKKQEELKFVIKEL 463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 603 QNALSeeldGHGDGIEQDQE--------PGSGECNPLNMSIEAELVIEQLKEQHHRDLCHLRLELEDKVRHYE---KQLD 671
Cdd:TIGR00606 464 QQLEG----SSDRILELDQElrkaerelSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTtrtQMEM 539
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 672 HTRVACEKEQVAMKQKY-------------------EQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKAscRHEEEKK 732
Cdd:TIGR00606 540 LTKDKMDKDEQIRKIKSrhsdeltsllgyfpnkkqlEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHI--NNELESK 617
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 733 QLQMVFDEEKtqLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAW------------------------TEEKARS 788
Cdd:TIGR00606 618 EEQLSSYEDK--LFDVCGSQDEESDLERLKEEIEKSSKQRAMLAGATAVysqfitqltdenqsccpvcqrvfqTEAELQE 695
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 789 LTRDLEQ------SHQEQLLSLMEKHALEKEELRKeLSEYHQRELQEGRYESEKLQEENSILRNEITTLNEEDSISNLKL 862
Cdd:TIGR00606 696 FISDLQSklrlapDKLKSTESELKKKEKRRDEMLG-LAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLL 774
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 863 EELNG---SQEELWQKIETIEQEKASIQKMVEKLKKQVSdlKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQK 939
Cdd:TIGR00606 775 GTIMPeeeSAKVCLTDVTIMERFQMELKDVERKIAQQAA--KLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLI 852
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 940 EDpgtctSEKWEQENESLKEELDRYKVQTSTlvSSLEAELSEVKLQTHIVEQENLLLKDELERLKQLHRCPDLSDFQQKM 1019
Cdd:TIGR00606 853 QD-----QQEQIQHLKSKTNELKSEKLQIGT--NLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEK 925
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1020 CSILSYNEnllKEKEVLSEELKSCADKLaeSSLLEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQM 1099
Cdd:TIGR00606 926 EELISSKE---TSNKKAQDKVNDIKEKV--KNIHGYMKDIENKIQDGKDDYLKQKETELNTVNAQLEECEKHQEKINEDM 1000
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1100 AQIESDLQVTRQEKEALKQEvmsLHLQLQNAIDKDWVSETATHLsGLQGQQKRLSWNKLDHLMSEEPELLCQESKRLQTV 1179
Cdd:TIGR00606 1001 RLMRQDIDTQKIQERWLQDN---LTLRKRENELKEVEEELKQHL-KEMGQMQVLQMKQEHQKLEENIDLIKRNHVLALGR 1076
|
810
....*....|....*....
gi 1958782432 1180 VQNTQADLTHSREKIRQLE 1198
Cdd:TIGR00606 1077 QKGYEKEIKHFKKELREPQ 1095
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
641-896 |
5.01e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 44.73 E-value: 5.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 641 IEQLKEQHHRDLCHLR-LELEDKVRHYEKQ------LDHTRVACEKEQVAMKQKYEQGMRTLEK-QISELQSEIADLQGQ 712
Cdd:pfam17380 301 LRQEKEEKAREVERRRkLEEAEKARQAEMDrqaaiyAEQERMAMERERELERIRQEERKRELERiRQEEIAMEISRMREL 380
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 713 AAVLKEAHHK-ASCRHEEEKKQLQMVFDEEKTQLQEELRLEHEQelkARLQQAEESFRQEREglaqaaaWTEEKARSLTR 791
Cdd:pfam17380 381 ERLQMERQQKnERVRQELEAARKVKILEEERQRKIQQQKVEMEQ---IRAEQEEARQREVRR-------LEEERAREMER 450
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 792 ----DLEQSHQEQLLSLME------KHALEKEE-------------LRKELSEYHQRELQEGR----YESEKLQEENSIL 844
Cdd:pfam17380 451 vrleEQERQQQVERLRQQEeerkrkKLELEKEKrdrkraeeqrrkiLEKELEERKQAMIEEERkrklLEKEMEERQKAIY 530
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1958782432 845 RNEITTLNEEDSISNLKLEELNGSQEELWQ------KIETIEQEKASIQKMVEKLKKQ 896
Cdd:pfam17380 531 EEERRREAEEERRKQQEMEERRRIQEQMRKateersRLEAMEREREMMRQIVESEKAR 588
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
403-1119 |
7.42e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 43.94 E-value: 7.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 403 LERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRneynlRKLDEEYKERIAALKNELRQEREQILQQVGKQR 482
Cdd:pfam05483 70 FENSEGLSRLYSKLYKEAEKIKKWKVSIEAELKQKENKLQEN-----RKIIEAQRKAIQELQFENEKVSLKLEEEIQENK 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 483 vELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTSKLQRSLENVLAEKFGDLDPSSAEFFLQEER 562
Cdd:pfam05483 145 -DLIKENNATRHLCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMILAFEELRVQAENARLEMHFKLKEDHEK 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 563 LAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPCQ------NALSEELDGHGDGIEQDQEPG---SGECNPLNM 633
Cdd:pfam05483 224 IQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEesrdkaNQLEEKTKLQDENLKELIEKKdhlTKELEDIKM 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 634 SIEAELVIEQLKEQH----HRDLCHLRLELEDKVRHYEK-QLDHTRVACEKEQV--AMKQKYEQGMRTLEKQISELQSEI 706
Cdd:pfam05483 304 SLQRSMSTQKALEEDlqiaTKTICQLTEEKEAQMEELNKaKAAHSFVVTEFEATtcSLEELLRTEQQRLEKNEDQLKIIT 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 707 ADLQGQAAVLKEAHhKASCRHEEEKKQLQMVFDEEKTQLQEELRLEH--------EQELKARLQQAEESFR--------- 769
Cdd:pfam05483 384 MELQKKSSELEEMT-KFKNNKEVELEELKKILAEDEKLLDEKKQFEKiaeelkgkEQELIFLLQAREKEIHdleiqltai 462
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 770 --QEREGLAQAAAWTEEKARSLTRDLEQSHQEQLLSLMEKHALEKE-----ELRKELSEYHQRELQEGRY--ESEKLQEE 840
Cdd:pfam05483 463 ktSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEAsdmtlELKKHQEDIINCKKQEERMlkQIENLEEK 542
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 841 NSILRNEITTLNEE----DSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQ 916
Cdd:pfam05483 543 EMNLRDELESVREEfiqkGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKK 622
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 917 KNSQNKEELKTLNQRLAEMLCQKEDpgtcTSEKWEQENESLKEELDRYKVQTSTLVSSLEaelsevklQTHIVEQENLLL 996
Cdd:pfam05483 623 KGSAENKQLNAYEIKVNKLELELAS----AKQKFEEIIDNYQKEIEDKKISEEKLLEEVE--------KAKAIADEAVKL 690
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 997 KDELERlkqlhRCpdlsdfqqkmcsilsynENLLKEKEVLSEELKSCADKLAESSLLEHRIATIKEEREAWEEQSqdlks 1076
Cdd:pfam05483 691 QKEIDK-----RC-----------------QHKIAEMVALMEKHKHQYDKIIEERDSELGLYKNKEQEQSSAKAA----- 743
|
730 740 750 760
....*....|....*....|....*....|....*....|...
gi 1958782432 1077 qlalsqekvqnLEDILKNVNLQMAQIESDLQVTRQEKEALKQE 1119
Cdd:pfam05483 744 -----------LEIELSNIKAELLSLKKQLEIEKEEKEKLKME 775
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
414-916 |
8.24e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 44.01 E-value: 8.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 414 EKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEyNLRKLDEEYKERIAALKNELRQErEQILQQVGKQRVELEQEIEKAK 493
Cdd:pfam01576 144 EDQNSKLSKERKLLEERISEFTSNLAEEEEKAK-SLSKLKNKHEAMISDLEERLKKE-EKGRQELEKAKRKLEGESTDLQ 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 494 TEENYIRDRLALSLKENNRLENEL---LENAEKLAEYENLTSKLQRSLENVLAEKFGDLdpssaefflqeERLAQMRNEY 570
Cdd:pfam01576 222 EQIAELQAQIAELRAQLAKKEEELqaaLARLEEETAQKNNALKKIRELEAQISELQEDL-----------ESERAARNKA 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 571 EQQCRLLQDQVDELQSELEEyqaqgrvlrlpcqnalseeldghgdgieqdqepgsgecnplnmSIEAELVIEQLKEQHHR 650
Cdd:pfam01576 291 EKQRRDLGEELEALKTELED-------------------------------------------TLDTTAAQQELRSKREQ 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 651 DLCHLRLELEDKVRHYEKQLDHTRVACEKEQVAMKQKYEQGMR---TLEKQISELQSEIADLQGQAAVLKEAHHKASCRH 727
Cdd:pfam01576 328 EVTELKKALEEETRSHEAQLQEMRQKHTQALEELTEQLEQAKRnkaNLEKAKQALESENAELQAELRTLQQAKQDSEHKR 407
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 728 EEEKKQLQmvfdeektqlqeELRLEHEQELKARLQQAEESFR--QEREGLAQAAAWTEEKARSLTRDLEQSHQEqllsLM 805
Cdd:pfam01576 408 KKLEGQLQ------------ELQARLSESERQRAELAEKLSKlqSELESVSSLLNEAEGKNIKLSKDVSSLESQ----LQ 471
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 806 EKHALEKEELRKELSEYHQ-RELQEGRYE-SEKLQEENSILRN---EITTLNEEDSISNLKLEELNGSqeelwqkIETIE 880
Cdd:pfam01576 472 DTQELLQEETRQKLNLSTRlRQLEDERNSlQEQLEEEEEAKRNverQLSTLQAQLSDMKKKLEEDAGT-------LEALE 544
|
490 500 510
....*....|....*....|....*....|....*.
gi 1958782432 881 QEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQ 916
Cdd:pfam01576 545 EGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQ 580
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
657-963 |
8.52e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 44.17 E-value: 8.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 657 LELEDKVRHYEKQLDHTRVACEKEQVAMKQKYEQGMRT------LEKQISELQSEIADLQGQAAVLKE---AHHKASCRH 727
Cdd:COG3096 343 LRQQEKIERYQEDLEELTERLEEQEEVVEEAAEQLAEAearleaAEEEVDSLKSQLADYQQALDVQQTraiQYQQAVQAL 422
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 728 EEEKKQLQMvfdeekTQLQEELRLEHEQELKARLQQAEESFRQERE--GLAQAAAWTEEKARSLTRDL------EQSHQ- 798
Cdd:COG3096 423 EKARALCGL------PDLTPENAEDYLAAFRAKEQQATEEVLELEQklSVADAARRQFEKAYELVCKIageverSQAWQt 496
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 799 --EQLLSLME-KHALEKEE-LRKELSEYHQRELQegRYESEKLQEENSILRNEitTLNEEDSISNLkLEELNGSQEELWQ 874
Cdd:COG3096 497 arELLRRYRSqQALAQRLQqLRAQLAELEQRLRQ--QQNAERLLEEFCQRIGQ--QLDAAEELEEL-LAELEAQLEELEE 571
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 875 KIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEM--LCQKEDPGTCTSEKWEQ 952
Cdd:COG3096 572 QAAEAVEQRSELRQQLEQLRARIKELAARAPAWLAAQDALERLREQSGEALADSQEVTAAMqqLLEREREATVERDELAA 651
|
330
....*....|.
gi 1958782432 953 ENESLKEELDR 963
Cdd:COG3096 652 RKQALESQIER 662
|
|
| Filament |
pfam00038 |
Intermediate filament protein; |
837-1119 |
9.44e-04 |
|
Intermediate filament protein;
Pssm-ID: 459643 [Multi-domain] Cd Length: 313 Bit Score: 42.99 E-value: 9.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 837 LQEENSILRNEITTLNEEDSISNLKLEELNGSQ-EELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQqldsenKELS 915
Cdd:pfam00038 23 LEQQNKLLETKISELRQKKGAEPSRLYSLYEKEiEDLRRQLDTLTVERARLQLELDNLRLAAEDFRQKYE------DELN 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 916 QKNSQnKEELKTLNQRLAEMLCQKEDpgtctsekWEQENESLKEELDRYKVQTSTLVSSLEAELSEvklQTHIVEQENLL 995
Cdd:pfam00038 97 LRTSA-ENDLVGLRKDLDEATLARVD--------LEAKIESLKEELAFLKKNHEEEVRELQAQVSD---TQVNVEMDAAR 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 996 ----------LKDELERLKQLHRCPDLSDFQQKMcsilsynENLLKEKEVLSEELKSCADKLAESSL----LEHRIATIK 1061
Cdd:pfam00038 165 kldltsalaeIRAQYEEIAAKNREEAEEWYQSKL-------EELQQAAARNGDALRSAKEEITELRRtiqsLEIELQSLK 237
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1958782432 1062 EEREAWEEQSQDLKSQLALSQEKVQNledilknvnlQMAQIESDLQVTRQEKEALKQE 1119
Cdd:pfam00038 238 KQKASLERQLAETEERYELQLADYQE----------LISELEAELQETRQEMARQLRE 285
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
454-594 |
9.91e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.21 E-value: 9.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 454 EEYKERIAALKNELRQEREQiLQQVGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYENLTSK 533
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKE-LAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEA 101
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958782432 534 LQRSLENVL--AEKFGDLDPS----SAEFFLQEERLAQMRNEYEQQcrlLQDQVDELQSELEEYQAQ 594
Cdd:COG4942 102 QKEELAELLraLYRLGRQPPLalllSPEDFLDAVRRLQYLKYLAPA---RREQAEELRADLAELAAL 165
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
775-1099 |
1.04e-03 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 43.48 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 775 LAQAAAWTEE--KARSLTRDLEQSHQEQLLSLMEKHALEK-EELRKELSEYHQRELQEGRYESEKLQE-----ENSILRN 846
Cdd:pfam05667 216 LAAAQEWEEEwnSQGLASRLTPEEYRKRKRTKLLKRIAEQlRSAALAGTEATSGASRSAQDLAELLSSfsgssTTDTGLT 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 847 EITTLNEEDSISNLKleELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELK 926
Cdd:pfam05667 296 KGSRFTHTEKLQFTN--EAPAATSSPPTKVETEEELQQQREEELEELQEQLEDLESSIQELEKEIKKLESSIKQVEEELE 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 927 TLnqrlaemlcqkedpgtctsekwEQENESLKEEldrYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLkdELERLKQL 1006
Cdd:pfam05667 374 EL----------------------KEQNEELEKQ---YKVKKKTLDLLPDAEENIAKLQALVDASAQRLV--ELAGQWEK 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1007 HRCPDLSDFQQkmcsilsynenlLKEKevlseelksCADKLAESsllEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQ 1086
Cdd:pfam05667 427 HRVPLIEEYRA------------LKEA---------KSNKEDES---QRKLEEIKELREKIKEVAEEAKQKEELYKQLVA 482
|
330
....*....|...
gi 1958782432 1087 NLEDILKNVNLQM 1099
Cdd:pfam05667 483 EYERLPKDVSRSA 495
|
|
| PRK00106 |
PRK00106 |
ribonuclease Y; |
726-828 |
1.16e-03 |
|
ribonuclease Y;
Pssm-ID: 178867 [Multi-domain] Cd Length: 535 Bit Score: 43.32 E-value: 1.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 726 RHEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLEQ--------SH 797
Cdd:PRK00106 50 KAERDAEHIKKTAKRESKALKKELLLEAKEEARKYREEIEQEFKSERQELKQIESRLTERATSLDRKDENlsskektlES 129
|
90 100 110
....*....|....*....|....*....|.
gi 1958782432 798 QEQLLSLMEKHALEKEELRKELSEYHQRELQ 828
Cdd:PRK00106 130 KEQSLTDKSKHIDEREEQVEKLEEQKKAELE 160
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
861-1079 |
1.35e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 1.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 861 KLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAEMLCQKE 940
Cdd:COG4942 35 EIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLRALY 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 941 DPGTCTSEKWEQENESLKEELDRYKVqTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQLHrcpdlsdfqqkmc 1020
Cdd:COG4942 115 RLGRQPPLALLLSPEDFLDAVRRLQY-LKYLAPARREQAEELRADLAELAALRAELEAERAELEALL------------- 180
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1958782432 1021 silsynENLLKEKEVLSEELKSCADKLAEsslLEHRIATIKEEREAWEEQSQDLKSQLA 1079
Cdd:COG4942 181 ------AELEEERAALEALKAERQKLLAR---LEKELAELAAELAELQQEAEELEALIA 230
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
561-854 |
1.52e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.37 E-value: 1.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 561 ERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLpCQNALSEELDghgdgieqdqepgsgecnplNMSIEAElv 640
Cdd:COG4913 613 AALEAELAELEEELAEAEERLEALEAELDALQERREALQR-LAEYSWDEID--------------------VASAERE-- 669
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 641 IEQLKEQHHrdlchlRLELE-DKVRHYEKQLDhtrvACEKEQVAMKQKYEQgmrtLEKQISELQSEIADLQGQAAVLKEA 719
Cdd:COG4913 670 IAELEAELE------RLDASsDDLAALEEQLE----ELEAELEELEEELDE----LKGEIGRLEKELEQAEEELDELQDR 735
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 720 HHKASCRHEEEKKQLqmvFDEE-KTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQA-----AAWTEEkARSLTRDL 793
Cdd:COG4913 736 LEAAEDLARLELRAL---LEERfAAALGDAVERELRENLEERIDALRARLNRAEEELERAmrafnREWPAE-TADLDADL 811
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958782432 794 EQSHQ-EQLLSLMEKHALEK-----EELRKELSEYHQRELQegryesEKLQEENSILRNEITTLNEE 854
Cdd:COG4913 812 ESLPEyLALLDRLEEDGLPEyeerfKELLNENSIEFVADLL------SKLRRAIREIKERIDPLNDS 872
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
338-825 |
1.55e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.37 E-value: 1.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 338 ERILDTWQEEgIENSQEILKALDFSLDGNINLTELTLALENELLVTKNGIHQAALASFKAEIRHLLERVDQVVREKEKLr 417
Cdd:COG4913 287 QRRLELLEAE-LEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARL- 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 418 sdldkAEKLKSLMASEVDDHHAAIERRNEynLRKLDEEYKERIAALKNELRQEREQiLQQVGKQRVELEQEIEK-AKTEE 496
Cdd:COG4913 365 -----EALLAALGLPLPASAEEFAALRAE--AAALLEALEEELEALEEALAEAEAA-LRDLRRELRELEAEIASlERRKS 436
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 497 NY------IRDRL--ALSLKENN-RLENELLENAEKLAEYENltsklqrSLENVL----------AEKFGD----LDPSS 553
Cdd:COG4913 437 NIparllaLRDALaeALGLDEAElPFVGELIEVRPEEERWRG-------AIERVLggfaltllvpPEHYAAalrwVNRLH 509
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 554 AEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQA------QGRVLRLPCQNAlsEELDGHGDGIEQD----QEP 623
Cdd:COG4913 510 LRGRLVYERVRTGLPDPERPRLDPDSLAGKLDFKPHPFRAwleaelGRRFDYVCVDSP--EELRRHPRAITRAgqvkGNG 587
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 624 GSGECNPlNMSIEAELVI-----EQLK---------EQHHRDLCHLRLELEDKVRHYEKQLDHTRvacekeQVAMKQKYE 689
Cdd:COG4913 588 TRHEKDD-RRRIRSRYVLgfdnrAKLAaleaelaelEEELAEAEERLEALEAELDALQERREALQ------RLAEYSWDE 660
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 690 QGMRTLEKQISELQSEIADL---QGQAAVLKEAHHKASCRHEEEKKQLQMVfDEEKTQLQEELR--LEHEQELKARLQQA 764
Cdd:COG4913 661 IDVASAEREIAELEAELERLdasSDDLAALEEQLEELEAELEELEEELDEL-KGEIGRLEKELEqaEEELDELQDRLEAA 739
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958782432 765 EESFRQEREGLAqAAAWTEEKARSLTRDLEQSHQEQLLSLMEKHALEKEELRKELSEYHQR 825
Cdd:COG4913 740 EDLARLELRALL-EERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRAFNRE 799
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
703-1373 |
1.66e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 43.03 E-value: 1.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 703 QSEIADLQGQAAVLKEAHH-KASCRHEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAW 781
Cdd:TIGR00618 215 DTYHERKQVLEKELKHLREaLQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAP 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 782 TEEKARSLTRdLEQSHQEQLLSLMEKHALEKEELRKELSEYHQR-ELQEGRYESEKLQEENSILRNEIttlNEEDSISNL 860
Cdd:TIGR00618 295 LAAHIKAVTQ-IEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQsSIEEQRRLLQTLHSQEIHIRDAH---EVATSIREI 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 861 KLEELNGSQ--EELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQrlaemlcq 938
Cdd:TIGR00618 371 SCQQHTLTQhiHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAEL-------- 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 939 KEDPGTCTSEKWEQENESLKEELDRYKVQTSTLvSSLEAELSEVKlQTHIVEQENLLLKDELERLkqlhRCPDLSDFQQK 1018
Cdd:TIGR00618 443 CAAAITCTAQCEKLEKIHLQESAQSLKEREQQL-QTKEQIHLQET-RKKAVVLARLLELQEEPCP----LCGSCIHPNPA 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1019 MCSIL------SYNENLLKEKEVLSEELKScadklaesslLEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDIL 1092
Cdd:TIGR00618 517 RQDIDnpgpltRRMQRGEQTYAQLETSEED----------VYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDI 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1093 KNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQNAIDKDWVSETathlsglQGQQKRLSWNKLDHLMSEEPELLCQE 1172
Cdd:TIGR00618 587 PNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLH-------LQQCSQELALKLTALHALQLTLTQER 659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1173 SKRLQTVVQNTQADLTHSREkirqlesnLLPTKHQKQLNQSCTVKPIEQEKLALKRECEQSRKERSPTSRKVSQMSS--- 1249
Cdd:TIGR00618 660 VREHALSIRVLPKELLASRQ--------LALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSslg 731
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1250 --LERELETIhleNEGLKKKQVRLDEKLMEMQPLRSagTHSPSSHWDLQLLQQ--QACPMVPREQFLQLQQQLLQAEKRS 1325
Cdd:TIGR00618 732 sdLAAREDAL---NQSLKELMHQARTVLKARTEAHF--NNNEEVTAALQTGAElsHLAAEIQFFNRLREEDTHLLKTLEA 806
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958782432 1326 QHLQ--------------------EELDNRTSEPNTVQGSQEHLVNLMEERMIEVEQKLKLVKRLLQE 1373
Cdd:TIGR00618 807 EIGQeipsdedilnlqcetlvqeeEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAKIIQL 874
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
472-816 |
1.74e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 43.02 E-value: 1.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 472 EQILQQVGKQRVELEQEIEKAKTEENYIRDRLAlSLKENNRLENELLENAEKLAEyENLTSKLQRSLENVLAEKfgdldp 551
Cdd:COG3096 835 EAELAALRQRRSELERELAQHRAQEQQLRQQLD-QLKEQLQLLNKLLPQANLLAD-ETLADRLEELREELDAAQ------ 906
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 552 sSAEFFLQE--ERLAQMrneyEQQCRLLQ---DQVDELQSELEEYQAQGRVLRLPCQnALSEELDGHGDGIEQDQEPGSG 626
Cdd:COG3096 907 -EAQAFIQQhgKALAQL----EPLVAVLQsdpEQFEQLQADYLQAKEQQRRLKQQIF-ALSEVVQRRPHFSYEDAVGLLG 980
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 627 ECNPLNMSIEAELviEQLKEQhhrdlchlRLELEDKVRHYEKQLDHTrvacEKEQVAMKQKYEQGMRTLEkqisELQSEI 706
Cdd:COG3096 981 ENSDLNEKLRARL--EQAEEA--------RREAREQLRQAQAQYSQY----NQVLASLKSSRDAKQQTLQ----ELEQEL 1042
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 707 ADLQGQAAVlkEAHHKASCRHEEEKKQLQmVFDEEKTQLQEEL-RLEHEQE-LKARLQQAEESFRQEREGLAQA-AAWTE 783
Cdd:COG3096 1043 EELGVQADA--EAEERARIRRDELHEELS-QNRSRRSQLEKQLtRCEAEMDsLQKRLRKAERDYKQEREQVVQAkAGWCA 1119
|
330 340 350
....*....|....*....|....*....|....
gi 1958782432 784 EKARSLTRDLEQS-HQEQLLslmekhALEKEELR 816
Cdd:COG3096 1120 VLRLARDNDVERRlHRRELA------YLSADELR 1147
|
|
| Borrelia_P83 |
pfam05262 |
Borrelia P83/100 protein; This family consists of several Borrelia P83/P100 antigen proteins. |
634-919 |
2.14e-03 |
|
Borrelia P83/100 protein; This family consists of several Borrelia P83/P100 antigen proteins.
Pssm-ID: 114011 [Multi-domain] Cd Length: 489 Bit Score: 42.30 E-value: 2.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 634 SIEAELVIEQLKEQHHRDLcHLRLELEDkVRHYEKQLDHTRVACEKEQVAMKQ----KYEQGMRTLEKQISELQSEIADL 709
Cdd:pfam05262 176 SISDKKVVEALREDNEKGV-NFRRDMTD-LKERESQEDAKRAQQLKEELDKKQidadKAQQKADFAQDNADKQRDEVRQK 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 710 QGQAavlKEAHHKASCRHEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREglaqaaawtEEKarsl 789
Cdd:pfam05262 254 QQEA---KNLPKPADTSSPKEDKQVAENQKREIEKAQIEIKKNDEEALKAKDHKAFDLKQESKA---------SEK---- 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 790 trdleqshqeqllsLMEKHALEKEELRKELSEYHQRELQEGRYESEKLQEENSILRNEITTLNEEDSISNL---KLEELN 866
Cdd:pfam05262 318 --------------EAEDKELEAQKKREPVAEDLQKTKPQVEAQPTSLNEDAIDSSNPVYGLKVVDPITNLselVLIDLK 383
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958782432 867 GSQEELWQKIETI------EQEKA--SIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNS 919
Cdd:pfam05262 384 TEVRLRESAQQTIrrrglyEREKDlvAIAITSGNAKLQLVDIDLKNLEVIKESNFEIAKNS 444
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
686-898 |
2.24e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 2.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 686 QKYEQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKASCRHEEEKKQLQmVFDEEKTQLQEELRlEHEQELKARLQQAE 765
Cdd:COG4942 37 AELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELA-ELEKEIAELRAELE-AQKEELAELLRALY 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 766 ESFRQEREGLAQAAAWTEEKARSLT--RDLEQSHQEQLLSLMEKHAlEKEELRKELSEyHQRELQEGRyesEKLQEENSI 843
Cdd:COG4942 115 RLGRQPPLALLLSPEDFLDAVRRLQylKYLAPARREQAEELRADLA-ELAALRAELEA-ERAELEALL---AELEEERAA 189
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1958782432 844 LRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVS 898
Cdd:COG4942 190 LEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
657-1127 |
2.48e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 42.40 E-value: 2.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 657 LELEDKVRHYEKQLDHTRVACEKEQVAMKQKYEQGMRTLEKQISELQSEIADLQGQAAVLKeahhKASCRHEEEKKQLQM 736
Cdd:pfam05483 186 MDLNNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLL----IQITEKENKMKDLTF 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 737 VFDEEK---TQLQEELRLEHEQelKARLQQAEESFRQEREGLAQAAAWTEEKARSLTRDLeQSHQEQLLSLMEKHALEKE 813
Cdd:pfam05483 262 LLEESRdkaNQLEEKTKLQDEN--LKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDL-QIATKTICQLTEEKEAQME 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 814 ELRKELSEyHQRELQEGRYESEKLQEensILRNEITTL-NEEDSISNLKLEELNGSQEelwqkIETIEQEKASIQKMVEK 892
Cdd:pfam05483 339 ELNKAKAA-HSFVVTEFEATTCSLEE---LLRTEQQRLeKNEDQLKIITMELQKKSSE-----LEEMTKFKNNKEVELEE 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 893 LKKQVSDlklkNQQLDSENKELSQKnsqnKEELKTLNQRLAEMLCQKEDP----------GTCTSEKWEQENESLKEELD 962
Cdd:pfam05483 410 LKKILAE----DEKLLDEKKQFEKI----AEELKGKEQELIFLLQAREKEihdleiqltaIKTSEEHYLKEVEDLKTELE 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 963 RYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELErlkqlhrcpDLSDFQQKMCSILSYNENLLKEKEVLSEELKS 1042
Cdd:pfam05483 482 KEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQE---------DIINCKKQEERMLKQIENLEEKEMNLRDELES 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1043 CADKLAESSllehriATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDLQVTRQEKEALKQEVMS 1122
Cdd:pfam05483 553 VREEFIQKG------DEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSA 626
|
....*
gi 1958782432 1123 LHLQL 1127
Cdd:pfam05483 627 ENKQL 631
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1219-1420 |
2.56e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.42 E-value: 2.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1219 IEQEKLALKRECEQSRK-ERSPTSRKVS-------------QMSSLERELETIHLENEGLKKKQVRLDEKLMEMQPLRSA 1284
Cdd:pfam17380 301 LRQEKEEKAREVERRRKlEEAEKARQAEmdrqaaiyaeqerMAMERERELERIRQEERKRELERIRQEEIAMEISRMREL 380
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1285 GThspsshwdLQLLQQQACPMVPREQFLQLQQQLLQAEKRSQHLQEELDNRTSEPNTVQGSQEHLVNLMEERMIEVE--- 1361
Cdd:pfam17380 381 ER--------LQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEERAREMErvr 452
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958782432 1362 ----QKLKLVKRLLQEKVNQLKEQLCKNSKTDAmvKDLYVENAQLLKALEMTEQRQKTAEKKN 1420
Cdd:pfam17380 453 leeqERQQQVERLRQQEEERKRKKLELEKEKRD--RKRAEEQRRKILEKELEERKQAMIEEER 513
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
784-998 |
2.63e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 42.22 E-value: 2.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 784 EKARSLTRDLEQsHQEQLLSLMEKHALEKEELRK-------ELSEYHQRELQEgrYESE--KLQEENSILRNEITTLNEE 854
Cdd:PRK05771 46 RKLRSLLTKLSE-ALDKLRSYLPKLNPLREEKKKvsvksleELIKDVEEELEK--IEKEikELEEEISELENEIKELEQE 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 855 dsISNLK-LEELNGSQEELWQKiETIEQEKASIQKMVEKLKKQVSDLKL-----------------KNQQLDSENKELSQ 916
Cdd:PRK05771 123 --IERLEpWGNFDLDLSLLLGF-KYVSVFVGTVPEDKLEELKLESDVENveyistdkgyvyvvvvvLKELSDEVEEELKK 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 917 KNSQNKE--ELKTLNQRLAEMLCQKEDpgtctsekWEQENESLKEELDRYKVQTSTLVSSLEAELSevklqtHIVEQENL 994
Cdd:PRK05771 200 LGFERLEleEEGTPSELIREIKEELEE--------IEKERESLLEELKELAKKYLEELLALYEYLE------IELERAEA 265
|
....
gi 1958782432 995 LLKD 998
Cdd:PRK05771 266 LSKF 269
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
838-1093 |
2.75e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 42.35 E-value: 2.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 838 QEENSILRNEITTLneEDSISNLkleelngsQEELWQKIETIEQEKASIQKMVEKLKKQVSDL-KLKNQQLDSENKELSQ 916
Cdd:TIGR01612 1103 KEENIKYADEINKI--KDDIKNL--------DQKIDHHIKALEEIKKKSENYIDEIKAQINDLeDVADKAISNDDPEEIE 1172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 917 KNSQN-----------KEELKTLNQRLAEMLCQK---EDPGTCTSEKWEQENESLKEELDRYKVQTSTLVSSLEA---EL 979
Cdd:TIGR01612 1173 KKIENivtkidkkkniYDEIKKLLNEIAEIEKDKtslEEVKGINLSYGKNLGKLFLEKIDEEKKKSEHMIKAMEAyieDL 1252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 980 SEVKLQTHIVEQENLLLKDELERLKQLhrcpDLSDFQQKMCSILSYNENllkekEVLSEeLKSCADKLAESSLLEHRIAT 1059
Cdd:TIGR01612 1253 DEIKEKSPEIENEMGIEMDIKAEMETF----NISHDDDKDHHIISKKHD-----ENISD-IREKSLKIIEDFSEESDIND 1322
|
250 260 270
....*....|....*....|....*....|....
gi 1958782432 1060 IKEEREAWEEQSQDLKSQLALSQEKVQNLEDILK 1093
Cdd:TIGR01612 1323 IKKELQKNLLDAQKHNSDINLYLNEIANIYNILK 1356
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
641-1396 |
2.97e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.44 E-value: 2.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 641 IEQLKEQHHRDLCHLRLELEDKvrhyEKQLDHTRVACEKEQVAMKQKYEQGMRTLEKQISELQSEIADLQGQAAVLKEAH 720
Cdd:PTZ00121 1029 IEELTEYGNNDDVLKEKDIIDE----DIDGNHEGKAEAKAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAK 1104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 721 HKASCRHEEEKKQLQMVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEE--------------KA 786
Cdd:PTZ00121 1105 KTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEarkaedakkaeaarKA 1184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 787 RSLTRDLEQSHQEQLLSLMEKHALEKEELRKELSEYHQ-------RELQEGRYESEKLQEENSILRNEITTLNEEDSISN 859
Cdd:PTZ00121 1185 EEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDakkaeavKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAH 1264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 860 LKLEELNGSQEElwqKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRL---AEML 936
Cdd:PTZ00121 1265 FARRQAAIKAEE---ARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAkkkAEEA 1341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 937 CQKEDPGTCTSEKWEQENESLKEELDRYKVQTSTLVSSLEA--ELSEVKLQTHIVEQENLLLKDELERLKQLHRCPDLSD 1014
Cdd:PTZ00121 1342 KKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAakKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKAD 1421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1015 FQQKMCSILSYNENLLK--EKEVLSEELKSCAD---------KLAESSLLEHRIATIKEEREAWEEQSQDLKSQLALSQE 1083
Cdd:PTZ00121 1422 EAKKKAEEKKKADEAKKkaEEAKKADEAKKKAEeakkaeeakKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADE 1501
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1084 KVQNLEDILKNVNLQMAQIESDLQVTRQEKEALKQEVMSLHLQLQNAIDKDWVSETATHLSGLQGQQKRLSWNKLDHLMS 1163
Cdd:PTZ00121 1502 AKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALR 1581
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1164 EEPELLCQESKRLQTVVQNTQADLTHSREKIRQLESNLLPTKH-QKQLNQSCTVKPIEQEKLALKRECEQSRKERSPTSR 1242
Cdd:PTZ00121 1582 KAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEElKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKI 1661
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1243 KVSQMSSLE----RELETIHLENEGLKKKQVRLDEKLMEMQPLRsagthspsshwdlQLLQQQACPMVPREQFLQLQQQL 1318
Cdd:PTZ00121 1662 KAAEEAKKAeedkKKAEEAKKAEEDEKKAAEALKKEAEEAKKAE-------------ELKKKEAEEKKKAEELKKAEEEN 1728
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958782432 1319 LQAEKRSQHLQEELDNRTSEPNTVQGSQEHLVNLMEERMIEVEQKLKLVKRLLQEKVNqlKEQLCKNSKTDAMVKDLY 1396
Cdd:PTZ00121 1729 KIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELD--EEDEKRRMEVDKKIKDIF 1804
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
472-780 |
3.69e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.87 E-value: 3.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 472 EQILQQVGKQRVELEQEIEKAKTEENYIRDRLAlSLKENNRLENELLENAEKLA------EYENLTSKLQRSLEnvlAEK 545
Cdd:PRK04863 836 EAELRQLNRRRVELERALADHESQEQQQRSQLE-QAKEGLSALNRLLPRLNLLAdetladRVEEIREQLDEAEE---AKR 911
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 546 FGDLDPSSAEfflQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPCQNAlseeldgHGDGIEQDQEPGS 625
Cdd:PRK04863 912 FVQQHGNALA---QLEPIVSVLQSDPEQFEQLKQDYQQAQQTQRDAKQQAFALTEVVQRR-------AHFSYEDAAEMLA 981
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 626 GecnplnmsiEAELViEQLKEQhHRDLCHLRLELEDKVRHYEKQLDhtrvacEKEQVAMKQKYEqgMRTLEKQISELQSE 705
Cdd:PRK04863 982 K---------NSDLN-EKLRQR-LEQAEQERTRAREQLRQAQAQLA------QYNQVLASLKSS--YDAKRQMLQELKQE 1042
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958782432 706 IADLQGQAAvlKEAHHKASCRHEEEKKQLQMVfDEEKTQLQEELRLEHEQ--ELKARLQQAEESFRQEREGLAQAAA 780
Cdd:PRK04863 1043 LQDLGVPAD--SGAEERARARRDELHARLSAN-RSRRNQLEKQLTFCEAEmdNLTKKLRKLERDYHEMREQVVNAKA 1116
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
869-1128 |
3.95e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.54 E-value: 3.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 869 QEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQ--QLDSENKELSQKNSQNKEELKTLNQRLAEMlcqkedpgtct 946
Cdd:COG3206 170 REEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGlvDLSEEAKLLLQQLSELESQLAEARAELAEA----------- 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 947 sekwEQENESLKEELDRYK-----VQTSTLVSSLEAELSEVKLQthiveqenllLKDELERLKQLHrcPDLsdfqqkmcs 1021
Cdd:COG3206 239 ----EARLAALRAQLGSGPdalpeLLQSPVIQQLRAQLAELEAE----------LAELSARYTPNH--PDV--------- 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1022 ilsynENLLKEKEVLSEELKSCADKLaessllehrIATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKnvnlQMAQ 1101
Cdd:COG3206 294 -----IALRAQIAALRAQLQQEAQRI---------LASLEAELEALQAREASLQAQLAQLEARLAELPELEA----ELRR 355
|
250 260
....*....|....*....|....*..
gi 1958782432 1102 IESDLQVTRQEKEALKQEVMSLHLQLQ 1128
Cdd:COG3206 356 LEREVEVARELYESLLQRLEEARLAEA 382
|
|
| GBP_C |
cd16269 |
Guanylate-binding protein, C-terminal domain; Guanylate-binding protein (GBP), C-terminal ... |
739-851 |
5.10e-03 |
|
Guanylate-binding protein, C-terminal domain; Guanylate-binding protein (GBP), C-terminal domain. Guanylate-binding proteins (GBPs) are synthesized after activation of the cell by interferons. The biochemical properties of GBPs are clearly different from those of Ras-like and heterotrimeric GTP-binding proteins. They bind guanine nucleotides with low affinity (micromolar range), are stable in their absence, and have a high turnover GTPase. In addition to binding GDP/GTP, they have the unique ability to bind GMP with equal affinity and hydrolyze GTP not only to GDP, but also to GMP. This C-terminal domain has been shown to mediate inhibition of endothelial cell proliferation by inflammatory cytokines.
Pssm-ID: 293879 [Multi-domain] Cd Length: 291 Bit Score: 40.64 E-value: 5.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 739 DEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLAQAAAWTEEKarslTRDLEQSHQEQLLSLMEKHALEKEELRKE 818
Cdd:cd16269 181 AEAEAILQADQALTEKEKEIEAERAKAEAAEQERKLLEEQQRELEQK----LEDQERSYEEHLRQLKEKMEEERENLLKE 256
|
90 100 110
....*....|....*....|....*....|....
gi 1958782432 819 LSEYHQRELQEGRYESEK-LQEENSILRNEITTL 851
Cdd:cd16269 257 QERALESKLKEQEALLEEgFKEQAELLQEEIRSL 290
|
|
| CCCAP |
pfam15964 |
Centrosomal colon cancer autoantigen protein family; CCCAP is a family of proteins found in ... |
654-967 |
5.31e-03 |
|
Centrosomal colon cancer autoantigen protein family; CCCAP is a family of proteins found in eukaryotes. CCCAP is also known as SDCCAG8, serologically defined colon cancer antigen 8. It is associated with the centrosome.
Pssm-ID: 435040 [Multi-domain] Cd Length: 703 Bit Score: 41.43 E-value: 5.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 654 HLRLELEDKVRHYEKQLDHTRVACEKEQVAMKQKYEQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKASCRHEEEKKQ 733
Cdd:pfam15964 360 QLKSELERQKERLEKELASQQEKRAQEKEALRKEMKKEREELGATMLALSQNVAQLEAQVEKVTREKNSLVSQLEEAQKQ 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 734 L------------QMVFDEEKTQLQEELRLEHEQELKARLQQAEESFRQEREGLA--------------QAAAWTEEKAR 787
Cdd:pfam15964 440 LasqemdvtkvcgEMRYQLNQTKMKKDEAEKEHREYRTKTGRQLEIKDQEIEKLGlelseskqrleqaqQDAARAREECL 519
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 788 SLTRDLEQSHQEQLLSLMEKHALEK---EELRKELSEYHQRE------LQEGRYESEKLQEENSILRNE----ITTLNEE 854
Cdd:pfam15964 520 KLTELLGESEHQLHLTRLEKESIQQsfsNEAKAQALQAQQREqeltqkMQQMEAQHDKTVNEQYSLLTSqntfIAKLKEE 599
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 855 DSISNLKLEELNGSQEelwQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLAE 934
Cdd:pfam15964 600 CCTLAKKLEEITQKSR---SEVEQLSQEKEYLQDRLEKLQKRNEELEEQCVQHGRMHERMKQRLRQLDKHCQATAQQLVQ 676
|
330 340 350
....*....|....*....|....*....|...
gi 1958782432 935 MLCQKedpgtctsEKWEQENESLKEELDRYKVQ 967
Cdd:pfam15964 677 LLSKQ--------NQLFKERQNLTEEVQSLRSQ 701
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
397-503 |
5.53e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 41.22 E-value: 5.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 397 AEIRHLLERVDQVVREKEKLRSDLDKAEKLKslmASEVDDHHAAIERRneynLRKLDEEYKERIAALkNELRQEREQILQ 476
Cdd:COG0542 411 EELDELERRLEQLEIEKEALKKEQDEASFER---LAELRDELAELEEE----LEALKARWEAEKELI-EEIQELKEELEQ 482
|
90 100
....*....|....*....|....*..
gi 1958782432 477 QVGKqRVELEQEIEKAKTEENYIRDRL 503
Cdd:COG0542 483 RYGK-IPELEKELAELEEELAELAPLL 508
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
751-904 |
6.05e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 40.92 E-value: 6.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 751 LEHEQELKARLQQAE-ESFRQEREGLAQAaawtEEKARSLTRDLEQSHQEQL--LSLMEKHALEKEE-LRKELSEYHQRE 826
Cdd:PRK12704 34 KEAEEEAKRILEEAKkEAEAIKKEALLEA----KEEIHKLRNEFEKELRERRneLQKLEKRLLQKEEnLDRKLELLEKRE 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 827 --LQEGRYESEKLQEENSILRNEITTLNEE-----DSISNLKLEElngSQEELWQKIE-TIEQEKASIQKMVEKLKKQVS 898
Cdd:PRK12704 110 eeLEKKEKELEQKQQELEKKEEELEELIEEqlqelERISGLTAEE---AKEILLEKVEeEARHEAAVLIKEIEEEAKEEA 186
|
....*.
gi 1958782432 899 DLKLKN 904
Cdd:PRK12704 187 DKKAKE 192
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
685-992 |
6.43e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 40.65 E-value: 6.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 685 KQKYEQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKASCRHEEEKKQLQMVFDEEKTQLQEELRLEHE-QELKARLQQ 763
Cdd:pfam07888 68 REQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSEELSEEKDALLAQRAAHEARIRELEEDiKTLTQRVLE 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 764 AEESFRQEREGLAQAAAWTEEkarsltrdlEQSHQEQLLSLMEKHALEKEELRKELSEYhQRELQEGRYESEKLQEENSI 843
Cdd:pfam07888 148 RETELERMKERAKKAGAQRKE---------EEAERKQLQAKLQQTEEELRSLSKEFQEL-RNSLAQRDTQVLQLQDTITT 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 844 LRNEITTLNEEDSISNLKLEELNGSQEELwqkietieqekASIQKMVEKLKKQVSDLKlknQQLDSENKELSQKNSQNKE 923
Cdd:pfam07888 218 LTQKLTTAHRKEAENEALLEELRSLQERL-----------NASERKVEGLGEELSSMA---AQRDRTQAELHQARLQAAQ 283
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958782432 924 elktLNQRLAEM-LCQKEDPGTctsekWEQENESLKE--ELDRYKVQT-STLVSSLEAELSEVKLQTHIVEQE 992
Cdd:pfam07888 284 ----LTLQLADAsLALREGRAR-----WAQERETLQQsaEADKDRIEKlSAELQRLEERLQEERMEREKLEVE 347
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
458-591 |
6.77e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 40.92 E-value: 6.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 458 ERIAALK-NELRQEREQILQQVGKQRVELEQEIEKAKTEENyirdrlalsLKENNRLENELLENAEKLAEYENltsKLQR 536
Cdd:PRK12704 26 KKIAEAKiKEAEEEAKRILEEAKKEAEAIKKEALLEAKEEI---------HKLRNEFEKELRERRNELQKLEK---RLLQ 93
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1958782432 537 SlENVLAEKFGDLDPSSAEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEY 591
Cdd:PRK12704 94 K-EENLDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERI 147
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
679-928 |
6.84e-03 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 40.28 E-value: 6.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 679 KEQVAMKQKYEQGMRTLEKQISELQSEIADLQGQAAVLKEAHHKASCRHEEEKKQLQMVFDEEKTQLQEELRLEHEQELK 758
Cdd:COG1340 60 QELREKRDELNEKVKELKEERDELNEKLNELREELDELRKELAELNKAGGSIDKLRKEIERLEWRQQTEVLSPEEEKELV 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 759 ARLQQAEESFRQereglAQAAAWTEEKARSLTRDLEQSHQEqllslMEKHALEKEELRKELSEYHQrELQEGRYESEKLQ 838
Cdd:COG1340 140 EKIKELEKELEK-----AKKALEKNEKLKELRAELKELRKE-----AEEIHKKIKELAEEAQELHE-EMIELYKEADELR 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 839 EENSILRNEITTLNEedsisnlKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKeLSQKN 918
Cdd:COG1340 209 KEADELHKEIVEAQE-------KADELHEEIIELQKELRELRKELKKLRKKQRALKREKEKEELEEKAEEIFEK-LKKGE 280
|
250
....*....|
gi 1958782432 919 SQNKEELKTL 928
Cdd:COG1340 281 KLTTEELKLL 290
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
389-595 |
7.59e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.58 E-value: 7.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 389 QAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKlkslmasEVDDHHAAIERRNEyNLRKLDEEYKERIAALKNELR 468
Cdd:COG3883 29 QAELEAAQAELDALQAELEELNEEYNELQAELEALQA-------EIDKLQAEIAEAEA-EIEERREELGERARALYRSGG 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 469 Q-----------------EREQILQQVGKQRVELEQEIEKAKTEENYIRDRLAlslKENNRLENELLENAEKLAEYENLT 531
Cdd:COG3883 101 SvsyldvllgsesfsdflDRLSALSKIADADADLLEELKADKAELEAKKAELE---AKLAELEALKAELEAAKAELEAQQ 177
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958782432 532 SKLQRSLENVLAEKfgdldpssAEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQG 595
Cdd:COG3883 178 AEQEALLAQLSAEE--------AAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAA 233
|
|
| RecN |
COG0497 |
DNA repair ATPase RecN [Replication, recombination and repair]; |
461-594 |
8.11e-03 |
|
DNA repair ATPase RecN [Replication, recombination and repair];
Pssm-ID: 440263 [Multi-domain] Cd Length: 555 Bit Score: 40.44 E-value: 8.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 461 AALKNELRQEREQiLQQVGKQRVELEQEIEKAKTEENYIR------DRLALSLKENNRLENEL--LENAEKLAEyenlts 532
Cdd:COG0497 154 EELLEEYREAYRA-WRALKKELEELRADEAERARELDLLRfqleelEAAALQPGEEEELEEERrrLSNAEKLRE------ 226
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 533 KLQRSLEnVLAEkfgdlDPSSAEFFLQE-----ERLAQMRNEYEQQCRLLQD---QVDELQSELEEYQAQ 594
Cdd:COG0497 227 ALQEALE-ALSG-----GEGGALDLLGQalralERLAEYDPSLAELAERLESaliELEEAASELRRYLDS 290
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
874-1119 |
9.58e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.20 E-value: 9.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 874 QKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENKELSQKNSQNKEELKTLNQRLaemlcqkedpgtctsekwEQE 953
Cdd:COG3883 23 KELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEI------------------EER 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 954 NESLKEELdRYKVQTSTLVSSLEAelsevklqthIVEQENllLKDELERLKQLHRcpdLSDFQQKMcsilsyNENLLKEK 1033
Cdd:COG3883 85 REELGERA-RALYRSGGSVSYLDV----------LLGSES--FSDFLDRLSALSK---IADADADL------LEELKADK 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958782432 1034 EVLSEELKSCADKLAESSLLEHRIATIKEEREAWEEQSQDLKSQLALSQEKVQNLEDILKNVNLQMAQIESDLQVTRQEK 1113
Cdd:COG3883 143 AELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAA 222
|
....*.
gi 1958782432 1114 EALKQE 1119
Cdd:COG3883 223 AAAAAA 228
|
|
| |
