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Conserved domains on  [gi|131839180|ref|YP_001096033|]
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ATP synthase F0 subunit 6 (mitochondrion) [Procyon lotor]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009564)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 1-226 1.98e-137

ATP synthase F0 subunit 6; Validated


:

Pssm-ID: 177163  Cd Length: 226  Bit Score: 384.30  E-value: 1.98e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180   1 MNENLFSSFTTPTMMGLPLIILITMAPSILFPSPARLINNRFISIQQWLICLVSKQMLSIHNHKGQTWALMLLSLILFIG 80
Cdd:MTH00101   1 MNENLFASFITPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  81 STNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRL 160
Cdd:MTH00101  81 STNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRL 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 131839180 161 TANITAGHLLIHLIGGATLALISINVPTALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNT 226
Cdd:MTH00101 161 TANITAGHLLIHLIGGATLALMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNT 226
 
Name Accession Description Interval E-value
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 1-226 1.98e-137

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 384.30  E-value: 1.98e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180   1 MNENLFSSFTTPTMMGLPLIILITMAPSILFPSPARLINNRFISIQQWLICLVSKQMLSIHNHKGQTWALMLLSLILFIG 80
Cdd:MTH00101   1 MNENLFASFITPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  81 STNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRL 160
Cdd:MTH00101  81 STNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRL 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 131839180 161 TANITAGHLLIHLIGGATLALISINVPTALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNT 226
Cdd:MTH00101 161 TANITAGHLLIHLIGGATLALMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNT 226
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 3-225 1.32e-53

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 171.62  E-value: 1.32e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180    3 ENLFSSFTTPTMMGLPLIILITMAPSILFPSPAR--LINNRFISIQQWLICLVSKQMLSIHNHKGQTWALMLLSLILFIG 80
Cdd:TIGR01131   3 SQFDISPITLFSLTLLSLILLLSLLIFLISSSLSrwLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFIL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180   81 STNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRL 160
Cdd:TIGR01131  83 ISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRL 162

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 131839180  161 TANITAGHLLIHLIGGATLALISINVptALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDN 225
Cdd:TIGR01131 163 FANISAGHLLLTLLSGLLFSLMSSAI--FALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDA 225
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 65-222 2.28e-43

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 143.31  E-value: 2.28e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  65 GQTWALMLLSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPMLVII 144
Cdd:cd00310    1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 131839180 145 ETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALISInvpTALITFIILTLLTILEFAVALIQAYVFTLLVSLYL 222
Cdd:cd00310   81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSS---VGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYI 155
ATP-synt_A pfam00119
ATP synthase A chain;
14-223 1.05e-40

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 138.39  E-value: 1.05e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180   14 MMGLPLIILITMApSILFPSPARLINNRFISIQQWLICLVSKQMLS-IHNHKGQTWALMLLSLILFIGSTNLLGLL---P 89
Cdd:pfam00119   3 MSLIVALILLLFL-LLATRKTKKLVPGRLQNFVEMLVEFVDNIVKDnIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksP 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180   90 HSFTPTTQLSMNLGMAIPLWAGTVILGFRYK-TKSSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGH 168
Cdd:pfam00119  82 GGFTVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGH 161

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 131839180  169 LLIHLIGGATLALISINVPTALITFIILTLLTILEFAVALIQAYVFTLLVSLYLH 223
Cdd:pfam00119 162 LLLLLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 19-224 1.28e-28

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 107.08  E-value: 1.28e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  19 LIILITMAPSILFPSPARLINNRFISIQQWLICLVSKQMLSIHNHKGQTWALMLLSLILFIGSTNLLGLLPHSFTPTTQL 98
Cdd:COG0356    8 LAMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADI 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  99 SMNLGMAIPLWAGTVILGFRYK-TKSSLAHFLPQGTPlPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGA 177
Cdd:COG0356   88 NVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGL 166

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 131839180 178 TLALISinvptALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHD 224
Cdd:COG0356  167 APFLLL-----GVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISL 208
 
Name Accession Description Interval E-value
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 1-226 1.98e-137

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 384.30  E-value: 1.98e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180   1 MNENLFSSFTTPTMMGLPLIILITMAPSILFPSPARLINNRFISIQQWLICLVSKQMLSIHNHKGQTWALMLLSLILFIG 80
Cdd:MTH00101   1 MNENLFASFITPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  81 STNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRL 160
Cdd:MTH00101  81 STNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRL 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 131839180 161 TANITAGHLLIHLIGGATLALISINVPTALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNT 226
Cdd:MTH00101 161 TANITAGHLLIHLIGGATLALMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNT 226
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-226 6.11e-88

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 258.99  E-value: 6.11e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180   1 MNENLFSSFTTPTMMGLPLIILITMAPSILFPSP-ARLINNRFISIQQWLICLVSKQMLSIHNHKGQTWALMLLSLILFI 79
Cdd:MTH00120   1 MNLNFFDQFSSPELLGIPLILLAMLIPALLIPSPkNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLMLLL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  80 GSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVR 159
Cdd:MTH00120  81 LLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 131839180 160 LTANITAGHLLIHLIGGATLALISINVPTALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNT 226
Cdd:MTH00120 161 LTANLTAGHLLIQLISTATLNLLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQENT 227
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 1-225 2.28e-85

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 252.49  E-value: 2.28e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180   1 MNENLFSSFTTPTMMGLPLIILITMAPSILFPSP-ARLINNRFISIQQWLICLVSKQMLSIHNHKGQTWALMLLSLILFI 79
Cdd:MTH00132   1 MTLSFFDQFMSPTYLGIPLIALALTLPWILFPTPtSRWLNNRLLTLQGWFINRFTQQLLLPLNVGGHKWALLLTSLMLFL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  80 GSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVR 159
Cdd:MTH00132  81 ITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVR 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 131839180 160 LTANITAGHLLIHLIGGATLALISINVPTALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDN 225
Cdd:MTH00132 161 LTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQEN 226
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-226 2.73e-84

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 249.88  E-value: 2.73e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180   1 MNENLFSSFTTPTMMGLPLIILITMAPSILFPSPA-RLINNRFISIQQWLICLVSKQMLSIHNHKGQTWALMLLSLILFI 79
Cdd:MTH00073   1 MNLSFFDQFLSPTLLGIPLIMLAMLLPWLLFPTPTnKWLNNRLSTLQIWFLQNFTKQLMLPLNTPGHKWALILTSLMVFL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  80 GSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVR 159
Cdd:MTH00073  81 ITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGVR 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 131839180 160 LTANITAGHLLIHLIGGATLALISINVPTALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNT 226
Cdd:MTH00073 161 LTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQENV 227
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-226 1.05e-72

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 220.20  E-value: 1.05e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180   1 MNENLFSSFTTPTMMGLPLIILITMAPSILFPSPA-RLINNRFISIQQWLICLVSKQMLSIHNHKGQTWALMLLSLILFI 79
Cdd:MTH00179   1 MMLSMFDQFESPSLLGIPLLALALLLPWLLFPSLTnRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  80 GSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVR 159
Cdd:MTH00179  81 LTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVR 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 131839180 160 LTANITAGHLLIHLIGGATLALISINVPTALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNT 226
Cdd:MTH00179 161 LTANITAGHLLMHLISSAVFVLMNFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENL 227
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 3-225 1.32e-53

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 171.62  E-value: 1.32e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180    3 ENLFSSFTTPTMMGLPLIILITMAPSILFPSPAR--LINNRFISIQQWLICLVSKQMLSIHNHKGQTWALMLLSLILFIG 80
Cdd:TIGR01131   3 SQFDISPITLFSLTLLSLILLLSLLIFLISSSLSrwLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFIL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180   81 STNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRL 160
Cdd:TIGR01131  83 ISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRL 162

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 131839180  161 TANITAGHLLIHLIGGATLALISINVptALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDN 225
Cdd:TIGR01131 163 FANISAGHLLLTLLSGLLFSLMSSAI--FALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDA 225
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-221 1.31e-51

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 166.50  E-value: 1.31e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180   1 MNENLFSSFTTPTMMGLPLIILITMAPSILFPSPARLINNRFISIQQWLICLVSKQMLSIHNHKGQTWALMLLSLILFIG 80
Cdd:MTH00157   1 MMTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFIL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  81 STNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRL 160
Cdd:MTH00157  81 FNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRL 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 131839180 161 TANITAGHLLIHLIGGATLALISINVPtalITFIILTLLTILEFAVALIQAYVFTLLVSLY 221
Cdd:MTH00157 161 AANMIAGHLLLTLLGNTGPSLSSMILS---ILILIQILLLILESAVAIIQSYVFSVLSTLY 218
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 1-225 1.06e-48

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 159.37  E-value: 1.06e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180   1 MNENLFSSFTTPTMMGLPLIIL-ITMAPS-ILFPSPARLINNRFISIQQWLICLVSKQMLSIHNHKGQTWALMLLSLILF 78
Cdd:MTH00035   3 INNSIFGQFSPDTILFIPLTLLsSVIALSwLFFINPTNWLPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVFIL 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  79 IGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAV 158
Cdd:MTH00035  83 ILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGL 162

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 131839180 159 RLTANITAGHLLIHLIGGATLALISiNVPTALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDN 225
Cdd:MTH00035 163 RLAANLTAGHLLIFLLSTAIWELSN-SPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQN 228
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 65-222 2.28e-43

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 143.31  E-value: 2.28e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  65 GQTWALMLLSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPMLVII 144
Cdd:cd00310    1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 131839180 145 ETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALISInvpTALITFIILTLLTILEFAVALIQAYVFTLLVSLYL 222
Cdd:cd00310   81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSS---VGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYI 155
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 5-224 3.99e-42

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 142.31  E-value: 3.99e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180   5 LFSSFTTPTMMGLPLIILI---TMAPSILFPSPARLINNRFISIQQWLICLVSKQMLSIHNHKGQTWALMLLSLILFIGS 81
Cdd:MTH00173   5 LFSSFDDHNSSFSSLSFLMwllSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFLFLIS 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  82 TNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLT 161
Cdd:MTH00173  85 LNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTVRLL 164

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 131839180 162 ANITAGHLLIHLIGGATLA-LISINVPTALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHD 224
Cdd:MTH00173 165 ANISAGHIVLTLIGNYLSSsLFSSSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP-synt_A pfam00119
ATP synthase A chain;
14-223 1.05e-40

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 138.39  E-value: 1.05e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180   14 MMGLPLIILITMApSILFPSPARLINNRFISIQQWLICLVSKQMLS-IHNHKGQTWALMLLSLILFIGSTNLLGLL---P 89
Cdd:pfam00119   3 MSLIVALILLLFL-LLATRKTKKLVPGRLQNFVEMLVEFVDNIVKDnIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksP 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180   90 HSFTPTTQLSMNLGMAIPLWAGTVILGFRYK-TKSSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGH 168
Cdd:pfam00119  82 GGFTVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGH 161

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 131839180  169 LLIHLIGGATLALISINVPTALITFIILTLLTILEFAVALIQAYVFTLLVSLYLH 223
Cdd:pfam00119 162 LLLLLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-226 1.07e-39

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 136.32  E-value: 1.07e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180   1 MNENLFSSFTTPTMMGLPLIILITMAP---SILFPSPARLINNRFISIQQWLICLVSKQMLSIHNHKGQTWALMLLSLIL 77
Cdd:MTH00176   1 MLVDLFSSFDPPNKNIFSMISLSWITLllfLLLMPSSVWFCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  78 FIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALA 157
Cdd:MTH00176  81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 131839180 158 VRLTANITAGHLLIHLIGGATLALISINVPTALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNT 226
Cdd:MTH00176 161 VRLAANLSAGHLLLGLLGAAMWGLLPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 1-224 1.05e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 118.22  E-value: 1.05e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180   1 MNENLFSSFTTPTMMGL---PLIILITMAPSILFPSPARLINNRFISIQQWLICLVSKQMLSIHNHKGQTWALMLLSLIL 77
Cdd:MTH00172   1 MSSSYFDQFNIVWLIGLtnsSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFIISLFF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  78 FIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALA 157
Cdd:MTH00172  81 FIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLG 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 131839180 158 VRLTANITAGHLLIHLIGGATLALISINVPTALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHD 224
Cdd:MTH00172 161 VRLAANLSAGHLLFAILAGFGFNMLCASGFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYLAD 227
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 8-224 1.77e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 115.10  E-value: 1.77e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180   8 SFTTPTMMGLPLIILITmapsiLFPSPARLINNRFISIQQWLICLVSKQMLSIHNHKGQTWALMLLSLILFIGSTNLLGL 87
Cdd:MTH00175  27 TFTNSSMMMVLAVIIFW-----LLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFILSLFLFIAILNILGL 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  88 LPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAG 167
Cdd:MTH00175 102 FPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAG 181

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 131839180 168 HLLIHLIGGATLALISINVP-TALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHD 224
Cdd:MTH00175 182 HLLFAILSGFAFNMLSNGLIiLSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGD 239
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 4-226 3.58e-30

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 111.75  E-value: 3.58e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180   4 NLFSSFTTPTMMGLPLIILITMAPSILfpsparLINNRFISIQQWLICLVSKQMLSIHNHKGQTWALMLLSLILFIGSTN 83
Cdd:MTH00005  15 SLFNNLSSTAFWAFNFSIILLLSSSFW------ITPNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALFTMIILMN 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  84 LLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTAN 163
Cdd:MTH00005  89 LSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFRLAAN 168

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 131839180 164 ITAGHLLIHLIGGATLALISINVPTALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNT 226
Cdd:MTH00005 169 MSAGHIVLSLIGIYAASALFSSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDDHP 231
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 19-224 1.28e-28

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 107.08  E-value: 1.28e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  19 LIILITMAPSILFPSPARLINNRFISIQQWLICLVSKQMLSIHNHKGQTWALMLLSLILFIGSTNLLGLLPHSFTPTTQL 98
Cdd:COG0356    8 LAMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADI 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  99 SMNLGMAIPLWAGTVILGFRYK-TKSSLAHFLPQGTPlPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGA 177
Cdd:COG0356   88 NVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGL 166

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 131839180 178 TLALISinvptALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHD 224
Cdd:COG0356  167 APFLLL-----GVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISL 208
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 11-224 1.89e-24

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 96.40  E-value: 1.89e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  11 TPTMMGLPLIILITMAPSILFPSPARLINNRFISIQQWLICLVSKQMLSIHNHKGQTWALMLLSLILFIGSTNLLGLLP- 89
Cdd:PRK05815  15 DSLLLSVLLGVLILLLFALVATRKLSGVPGGLQNFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLFLFILLMNLLGLIPy 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  90 HSFTPTTQLSMNLGMAIPLWAGTVILGFRYKtksSLAHFLPQGTPLPlIPMLVIIETISLFIQPMALAVRLTANITAGHL 169
Cdd:PRK05815  95 LLFPPTADINVTLALALIVFVLVIYYGIKKK---GLGGYLKEFYLQP-HPLLLPIEIISEFSRPISLSLRLFGNMLAGEL 170

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 131839180 170 LIHLIGGatlaLISINVPTALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHD 224
Cdd:PRK05815 171 ILALIAL----LGGAGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYISM 221
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 64-224 2.37e-22

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 91.54  E-value: 2.37e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  64 KGQTWALMLLSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPMLVI 143
Cdd:MTH00174  86 KGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTI 165

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180 144 IETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALISINVPT-ALITFIILTLLTILEFAVALIQAYVFTLLVSLYL 222
Cdd:MTH00174 166 IETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIgSFVPFAILIFVTILEMAVAIIQAYVFTLLTIVYL 245


                 ..
gi 131839180 223 HD 224
Cdd:MTH00174 246 RD 247
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 72-222 3.84e-18

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 81.33  E-value: 3.84e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  72 LLSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFR-YKTKSSLAHfLPQGTPLPLIPMLVIIETISLF 150
Cdd:PRK13419 174 LLTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFITQYAAIKaHGIKGYLAH-LTGGTHWSLWIIMIPIEFIGLF 252

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 131839180 151 IQPMALAVRLTANITAGHLLIHLIGGATLAL------ISINVPTALitFIILtlltiLEFAVALIQAYVFTLLVSLYL 222
Cdd:PRK13419 253 TKPFALTVRLFANMTAGHIVILSLIFISFILksyivaVAVSVPFAI--FIYL-----LELFVAFLQAYIFTMLSALFI 323
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 19-222 2.49e-11

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 62.22  E-value: 2.49e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  19 LIILITMAPSILFPSPARlINNRFISIQQWLICLVSKQML--SIHNHkGQTWALMLLSLILFIGSTNLLGLLP------- 89
Cdd:PRK13417 108 LFLIFIPAANIIAKNPLK-VQSRFANTVEVFVNFLRKDIVdeSMHGH-GHSYYHYIFTLFFFILFCNLMGLVPsvgeltv 185

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  90 ---------------------HSF-------TPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPML 141
Cdd:PRK13417 186 vasdygglvalgvmdhtphalPTFakvwsgiTVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIM 265

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180 142 VIIETI-SLFIQPMALAVRLTANITAGHLLIHLIGGATLALISINVptALITFIILTLLTILEFAVALIQAYVFTLLVSL 220
Cdd:PRK13417 266 WPLEFIvSPMAKTFALTVRLLANMTAGHVIILALMGFIFQFQSWGI--VPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSL 343


                 ..
gi 131839180 221 YL 222
Cdd:PRK13417 344 FV 345
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 74-222 1.65e-10

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 58.07  E-value: 1.65e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  74 SLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSlaHFLPQGTPLPLIPM-LVIIETISLFIQ 152
Cdd:MTH00087  57 FTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKSEKFS--VYLSKGSDSFLKTFsMLFVEIVSELSR 134

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 131839180 153 PMALAVRLTANITAGHLLIHLIGGATLalisinvptaliTFIILTLLTIL-EFAVALIQAYVFTLLVSLYL 222
Cdd:MTH00087 135 PLALTLRLTVNLMVGHLISSLLNFLGE------------KYVWLSILAIMmECFVAFIQSYIFSRLIYLYL 193
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 74-217 8.75e-04

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 39.29  E-value: 8.75e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  74 SLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRykTKSSLAHFLPQGTPLPLIPMLVIIETISlfiQP 153
Cdd:PRK13421  83 TLFLFVLVANWSSLVPGVEPPTAHLETDAALALIVFLATIYYGVR--ARGVRGYLATFAEPTWVMIPLNLVEQLT---RT 157

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 131839180 154 MALAVRLTANITAGHLLIhligGATLALISINVPtalITFIILTLLTilefavALIQAYVFTLL 217
Cdd:PRK13421 158 FSLIVRLFGNVMSGVFVI----GIVLSLAGLLVP---IPLMALDLLT------GAVQAYIFAVL 208
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 74-222 2.07e-03

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 38.18  E-value: 2.07e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180  74 SLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYK-TKSSLAHFLPQGtplpliPMLVIIETISLFIQ 152
Cdd:PRK13420  80 TLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFGIRAEgLREYLKHYLSPS------PFLLPFHLISEITR 153

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180 153 PMALAVRLTANITAghllIHLIGGATLALISINVPTALItfiiltlltILEFAVALIQAYVFTLLVSLYL 222
Cdd:PRK13420 154 TLALAVRLFGNIMS----LELAALLVLLVAGFLVPVPIL---------MLHIIEALVQAYIFGMLALIYI 210
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 126-215 7.35e-03

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 36.02  E-value: 7.35e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 131839180 126 AHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGatlaLISINVPtaliTFIILTLLTILEFA 205
Cdd:MTH00050  80 SSFVPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLGCFGGVALGN----LCFISYW----WFLVLFFLFFYEVF 151

                         90
                 ....*....|
gi 131839180 206 VALIQAYVFT 215
Cdd:MTH00050 152 VALVHWFIVS 161
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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