|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
1-614 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 1060.38 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 1 MYILILFLPLLSAIVSGLFGRKIGTKGAGIFTSNCIIISFLLSCYMYYEIILNFSPAYIRLWRWFDSELFTTYFGLQFDN 80
Cdd:MTH00210 1 MYILVLFLPLLSAIISGLFGRKIGTKGAGILTSSCIVISAIVSCCIFYETTLNGSATYIKLWRWFDSELLTTYFGLQFDS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 81 LTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIKA 160
Cdd:MTH00210 81 LTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 161 NKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITfEINNNSLTIICLLLFIGAIGKSAQLGLHTWLPDAME 240
Cdd:MTH00210 161 NKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVT-NINKESLTIICLLLFIGAVGKSAQLGLHTWLPDAME 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 241 GPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCG 320
Cdd:MTH00210 240 GPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCG 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 321 ISGYSVGLFHLFNHAFFKALLFLSAGSIIHAVSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILEL 400
Cdd:MTH00210 320 ISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILEL 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 401 SFEKYYIILAFWLASSAAFLTAFYSIRLIYFTFIINSNAPKEVFLKIHESSKIILFPLALLAFGGIFLGYLGKEYFLSNI 480
Cdd:MTH00210 400 TYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGVHESSWNITFPLLLLAFGSIFVGYLGKEVVLSNV 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 481 ITPIMPNSIKLVPLFFSLSGAGLAYFLLCYQ---INTLDNKVFKKTYHVIYTFLNSAWQFNYVINHLIIKQIWKMGHVIT 557
Cdd:MTH00210 480 IPPIVPNSIKMIPLLFSLLGALLAFVIYNSMvflIKISRRGVSIRLYHVIYTFLNSAWQFNYVINHFIVKNIWKFGHLIT 559
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*..
gi 164421187 558 YKLIDRGILEVIGPKGLSVVFVKLTQIISKLQSGLLFNYVLVIIIFTTFFISGFNIF 614
Cdd:MTH00210 560 YRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYALIMIIFTTLFISGAGIE 616
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
1-610 |
0e+00 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 858.22 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 1 MYILILFLPLLSAIVSGLFGRKIGTKGAGIFTSNCIIISFLLSCYMYYEIILNFSPAYIRLWRWFDSELFTTYFGLQFDN 80
Cdd:MTH00020 1 MYLLVLFLPLLGALLSGLFGRKIGEKGAGILTSSCLIISLSWSFLIFYEILFNSSTTYIKLWRWLDSDLLTVYFGLQFDG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 81 LTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIKA 160
Cdd:MTH00020 81 LVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 161 NKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITFEINNnsLTIICLLLFIGAIGKSAQLGLHTWLPDAME 240
Cdd:MTH00020 161 NKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVVSAPSSD--ITLICLFLFIGAVGKSAQLGLHTWLPDAME 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 241 GPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCG 320
Cdd:MTH00020 239 GPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACG 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 321 ISGYSVGLFHLFNHAFFKALLFLSAGSIIHAVSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILEL 400
Cdd:MTH00020 319 LSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILEL 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 401 SFEKYYIILAFWLASSAAFLTAFYSIRLIYFTFIINSNAPKEVFLKIHESSKIILFPLALLAFGGIFLGYLGKEYFLSNI 480
Cdd:MTH00020 399 AFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLKKAVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEMIWSFQ 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 481 IT--PIMPNSIKLVPLFFSLSGAGLAYFLLCYQINTLdNKVFKKTYHVIYTFLNSAWQFNYVINHLIIKQIWKMGHVITY 558
Cdd:MTH00020 479 ITlpPIVPLSIKLLPVFLSLGGIGLVIILYFYSSKTF-RVPFSFIGRNSYTFLGSAWQFNYILNYFLIKKIWKGGHLISY 557
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|..
gi 164421187 559 KLIDRGILEVIGPKGLSVVFVKLTQIISKLQSGLLFNYVLVIIIFTTFFISG 610
Cdd:MTH00020 558 RTIDKGVLELVGPKGISNFLIILTQGLSSLQSGLVFNYALVILIGVAIFIWG 609
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-603 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 678.80 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 1 MYILILFLPLLSAIVSGLFGRKIGTKGAGIFTSNCIIISFLLSCYMYYEIILNFSPAY-IRLWRWFDSELFTTYFGLQFD 79
Cdd:PRK06590 4 LLWLIVLLPLIGALILGLFGRRIGEKWAHLVGTGLVGLSALLSLVVFFDFLLGGGRAFsQTLWTWISVGDFDVDFGLRVD 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 80 NLTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIK 159
Cdd:PRK06590 84 GLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPS 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 160 ANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFS-IISSSLITFEINNNSLTIICLLLFIGAIGKSAQLGLHTWLPDA 238
Cdd:PRK06590 164 AGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDeVFAAAPQFFGLGWSALTLICLLLFIGAMGKSAQFPLHTWLPDA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 239 MEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMV 318
Cdd:PRK06590 244 MEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLA 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 319 CGISGYSVGLFHLFNHAFFKALLFLSAGSIIHAVSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLIL 398
Cdd:PRK06590 324 LGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEIL 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 399 ELSFEKYYIILaFWLASSAAFLTAFYSIRLIYFTFiinSNAPKEVFLKIHESSKIILFPLALLAFGGIFLGYLGKEYFLS 478
Cdd:PRK06590 404 EAAFANGHINL-FVAGLVGAFLTAFYSFRLIFLVF---HGKEKEKIHHPHESPAVMTLPLIVLAVLSVFAGALIVPPFLG 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 479 NIITP----------IMPNSIKLVPLFFSLSGAGLAYFLlcYQINTLDNKVFKKTYHVIYTFLNSAWQFNYVINHLIIKQ 548
Cdd:PRK06590 480 VLPLTtelahgeaehHLPVWVALLPLVVALAGIALAWLL--YLKKPTLPTSIAAPGRFLYTLLRNKYYFDELYEKVFVKP 557
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*
gi 164421187 549 IWKMGHVItYKLIDRGILEVIGpKGLSVVFVKLTQIISKLQSGLLFNYVLVIIIF 603
Cdd:PRK06590 558 GLALARLL-WKDGDDGIIDGLV-PNSARLVGGGSRVLRRLQTGYLRHYAASMLIG 610
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
1-609 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 623.52 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 1 MYILILFLPLLSAIVSGLFGRKIGTKGAGIFTSNCIIISFLLSCYMYYEIILNFSPAYIRLWRWFDSELFTTYFGLQFDN 80
Cdd:MTH00032 1 MYLLVLLLPFINAFLLGFFGRLIGTIGSGILSTICMGSSTLIALFLAYEVLINDAVVHIELYKWIESEIFITHIGLLYDT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 81 LTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIKA 160
Cdd:MTH00032 81 LSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 161 NKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITFEINNNS-------------LTIICLLLFIGAIGKSA 227
Cdd:MTH00032 161 NKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNGGSVGSGIMDRGyygggayesplapFAIIGILLLIGCIGKSA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 228 QLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYS 307
Cdd:MTH00032 241 QLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 308 TCSQLGYMVMVCGISG-YSVGLFHLFNHAFFKALLFLSAGSIIHAVS-DEQDMRKMGALIKTIPFTYIMILIGSLSLMGF 385
Cdd:MTH00032 321 TCSQLGYMVLIIGIEGsHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 386 PYLTGFYSKDLILELSFEKYYI------------------------------------ILAFWLASSAAFLTAFYSIRLI 429
Cdd:MTH00032 401 PYLTGFYSKDLILELTYSGRNMgipfgssllkiqgdigikkddrgsiggpegypsrgsAFAFWLGTVAALLTAFYSIRLV 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 430 YFTFIINSNAPKEVFLKIHES--SKIILFPLALLAFGGIFLGYLGKEYFLSNIITPIMPNSIKLVPLFFSLSGAGLAyfl 507
Cdd:MTH00032 481 YITFIISPNSPKESLISSHINivDKRVLTVLSLLCFGAIFVGYLIQDILIGDIEHPIVPPLIKVMPTLMGLFGMGLC--- 557
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 508 LCYQINTLDNKVFKKTYHV-------IYTFLNSAWQFNYVINHLIIKQIWKMGHVITYKLIDRGILEVIGPKGLSVVFVK 580
Cdd:MTH00032 558 LWAQKGTREGELYWGFDPIgpsfllsIYSFLGGAWQGDHLINKLVAIPLFSFGHWGIYKTLDRGWLELFGPQGISTIALR 637
|
650 660
....*....|....*....|....*....
gi 164421187 581 LTQIISKLQSGLLFNYVLVIIIFTTFFIS 609
Cdd:MTH00032 638 VSQFISNLQSGVISRYALVLLSFTIIFLA 666
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
1-603 |
0e+00 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 596.57 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 1 MYILILFLPLLSAIVSGLFGRKIGTKGAGIFTSNCIIISFLLSCYMYYEIILNFSPAYIR--LWRWFDSELFTTYFGLQF 78
Cdd:TIGR01974 2 LIFLIVFLPLIGFLIAGLFGRRIGERVSGIIGIGSVGLSAALSAFVFVDFFLNGEGEAFTqsLFPWISVGGFQVDFGLRL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 79 DNLTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRI 158
Cdd:TIGR01974 82 DGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKP 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 159 KANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITFEinNNSLTIICLLLFIGAIGKSAQLGLHTWLPDA 238
Cdd:TIGR01974 162 SANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPGAF--FSALTLICLLLFIGAMGKSAQLPLHTWLPDA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 239 MEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMV 318
Cdd:TIGR01974 240 MEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 319 CGISGYSVGLFHLFNHAFFKALLFLSAGSIIHAVSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLIL 398
Cdd:TIGR01974 320 LGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLIL 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 399 ELSFEKYYIILAFWLASSAAFLTAFYSIRLIYFTFiiNSNAPKEVFLKIHESSKIILFPLALLAFGGIFLGYLGKEYF-- 476
Cdd:TIGR01974 400 EAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVF--HGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFef 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 477 ----LSNIITPI-----MPNSIKLVPLFFSLSGAGLAYFLlcYQINTLDNKVFKKTYHVIYTFLNSAWQFNYVINHLIIK 547
Cdd:TIGR01974 478 lkgvLPTSAEPAlehhhVPALEIWSPTAVAILGILLAYLL--YLGNPTLPAKIAQRHSGLYRLLLNKWYFDELYDKVFVK 555
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*.
gi 164421187 548 QIWKMGHvITYKLIDRGILEVIGPkGLSVVFVKLTQIISKLQSGLLFNYVLVIIIF 603
Cdd:TIGR01974 556 PYLFLGK-LLWKDPDDKIIDGFGP-GIARLVGAISKRLRKSQTGYLRWYAASMVVG 609
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-608 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 594.05 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 1 MYILILFLPLLSAIVSGLFGRKIGTKGAGIFTSNCIIISFLLSCYMYYEIIlnFSPAYIRLWRWFDSELFTTYFGLQFDN 80
Cdd:COG1009 3 LLWLIPLLPLLGALLAGLLGRRLGRRAAGWLAALAPLAAFVLSLLLFPAVL--GGEVVVELYTWIPVGSLGLDFGFRLDG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 81 LTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIKA 160
Cdd:COG1009 81 LSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 161 NKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITFeINNNSLTIICLLLFIGAIGKSAQLGLHTWLPDAME 240
Cdd:COG1009 161 RRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTI-LSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAME 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 241 GPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCG 320
Cdd:COG1009 240 GPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALG 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 321 ISGYSVGLFHLFNHAFFKALLFLSAGSIIHAVSdEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILEL 400
Cdd:COG1009 320 VGAYVAALFHLLTHAFFKALLFLGAGSVIHATG-TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEA 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 401 SFEKYYI-ILAFWLASSAAFLTAFYSIRLIYFTFIinSNAPKEVFLKIHESSKIILFPLALLAFGGIFLG---------Y 470
Cdd:COG1009 399 ALEAGGLgPLLLAVALLGAFLTAFYSFRLFFLVFF--GKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGlllpgllegL 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 471 LGKEYFLSNIITPIMPNSIKLVPLFFSLSGAGLAYFLlcYQINTLDnkVFKKTYHVIYTFLNSAWQFNYVINHLIIKQIW 550
Cdd:COG1009 477 LAPAAVLGGELHLAHGLLLNALPLLLSLLGIALGYLL--YLKRPLP--ALAERLKPLYRLLANKWYFDELYDALFVKPVR 552
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 164421187 551 KMGHVItykLIDRGILEVIgPKGLSVVFVKLTQIISKLQSGLLFNYVLVIIIFTTFFI 608
Cdd:COG1009 553 ALARFL---WFDRYVIDGI-VNGLARLTLFSGRLLRRLQTGYLQFYALTILLGVVVLL 606
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
4-568 |
1.40e-133 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 405.95 E-value: 1.40e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 4 LILFLPLLSAIVSGL----FGRKIGT--KGAGIFTSNCIIISFLLSCYMYYEIIlNFSPAYIRLWRWFDSELFTTYFGLQ 77
Cdd:PRK07376 10 LIPVLPLLGAVLVGLglisFNQTTNRlrQPVAVLLISLVGAAAVLSYALLWSQI-QGHEPYERLFEWASAGDFHLPMGYV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 78 FDNLTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTR 157
Cdd:PRK07376 89 IDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 158 IKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSII----SSSLITFEINNNSLTIICLLLFIGAIGKSAQLGLHT 233
Cdd:PRK07376 169 KGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIadrlSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHV 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 234 WLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLG 313
Cdd:PRK07376 249 WLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLG 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 314 YMVMVCGISGYSVGLFHLFNHAFFKALLFLSAGSIIHAVSD--------EQDMRKMGALIKTIPFTYIMILIGSLSLMGF 385
Cdd:PRK07376 329 YMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGI 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 386 PYLTGFYSKDLILELSFEKYyiiLAFWLASSA-AFLTAFYSIRLIYFTF---------------IINSNAPKEVFLK--- 446
Cdd:PRK07376 409 PPFAGFWSKDEILGAAFEAN---PALWFVGFLtAGMTAFYMFRMYFLTFegefrgndkelqkelLAAADAPGHHEGHhee 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 447 ----------IHESSKIILFPLALLAFGGIFLGYLGKEY--FLSNIITPimPNSIKLVPLFFSL-------------SGA 501
Cdd:PRK07376 486 hgehhhhsgsPHESPWTMTLPLVVLAVPSVLIGLLGTPWnnRFEAFLHA--PGEALEAAAHFEWgeflilagasvgiALI 563
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 164421187 502 GLAYFLLCYQINTLDNKVFKKTYHVIYTFLNSAWQFNYVINHLIIKqiwkmghviTYKLIDRGILEV 568
Cdd:PRK07376 564 GITLASLMYLLKKIDPAAIAERFPPLYQFSLNKWYLDDIYEKLFVK---------GSRRLARQVLEV 621
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
62-608 |
1.05e-132 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 401.46 E-value: 1.05e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 62 WRWFDSELFTTYFGLQFDNLTATMLII---IT-SISAlvhiYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLF 137
Cdd:MTH00004 66 WPWIFTTTFNIPISFKLDQYSLMFLPIalfVTwSILE----FSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLF 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 138 IGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSslitfeiNNNSLTIICLL 217
Cdd:MTH00004 142 IGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFS-------PTQTPTLPLLG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 218 LFIGAIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQ 297
Cdd:MTH00004 215 LILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQ 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 298 NDLKKVIAYSTCSQLGYMVMVCGISGYSVGLFHLFNHAFFKALLFLSAGSIIHAVSDEQDMRKMGALIKTIPFTYIMILI 377
Cdd:MTH00004 295 NDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTI 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 378 GSLSLMGFPYLTGFYSKDLILELSFEKYYIILAFWLASSAAFLTAFYSIRLIYFTFI----INSNAPkevflkIHESSKI 453
Cdd:MTH00004 375 GNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTgfprTPPTTP------INENTPT 448
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 454 ILFPLALLAFGGIFLGYLGKEYFLSNIITPI-MPNSIKLVPLFFSLSGAglayfLLCYQINTLDNKVFKKTYHVIYTFLN 532
Cdd:MTH00004 449 IINPITRLALGSILAGLLISSTILPTKTPPMtMPTTTKLAALIVTILGI-----LLALELSNMTTTLTPPKQNTLHNFSN 523
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 164421187 533 SAWQFNYVINHLIIKQIWKMGHVITYKLIDRGILEVIGPKGLSVVFVKLTQIISKLQSGLLFNYVLVIIIFTTFFI 608
Cdd:MTH00004 524 QLAFFNPLTHRLLPMTLLKSSQKIATHLIDLSWLEKMGPKGLANLQLTASKTLTTLQKGLIKNYLTSFALTILLLL 599
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-614 |
8.44e-132 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 398.94 E-value: 8.44e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 1 MYILILFLPLLSAIVSGLFGRKIGTKGAgiftsncIIISFLLSCYMYYEIILNFSPAYIRLWRWFDSELFTTYFGLQFDN 80
Cdd:MTH00211 7 SGFLLILILLLLPLLLPLNNSKLHIKKA-------VKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 81 LTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIKA 160
Cdd:MTH00211 80 YSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 161 NKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSiisssliTFEINNNSLTIICLLLFIGAIGKSAQLGLHTWLPDAME 240
Cdd:MTH00211 160 NTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEIS-------QLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAME 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 241 GPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCG 320
Cdd:MTH00211 233 GPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 321 ISGYSVGLFHLFNHAFFKALLFLSAGSIIHAVSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILEL 400
Cdd:MTH00211 313 LNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILES 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 401 SFEKYYIILAFWLASSAAFLTAFYSIRLIYFTFIINSNAPkeVFLKIHESSKIILFPLALLAFGGIFLGYLGKEYFLSNI 480
Cdd:MTH00211 393 MNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFL--SLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEK 470
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 481 ITPI-MPNSIKLVPLFFSLSGAGLAYFLLcyqintldNKVFKKTYHVIYTFLNSAWQFNYVINHLIIKQIWKMGHVITYK 559
Cdd:MTH00211 471 PEILsLPFLLKLMPLLVTIVGLLLGLELV--------NLTHKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLSTH 542
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*
gi 164421187 560 LIDRGILEVIGPKGLSVVFVKLTQIISKLQSGLLFNYVLVIIIFTTFFISGFNIF 614
Cdd:MTH00211 543 LMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLLSLLLILLLFLLF 597
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
62-609 |
3.51e-125 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 381.95 E-value: 3.51e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 62 WRWFDSELFTTYFGLQFDNLTatmlIIITSISALVHI----YSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLF 137
Cdd:MTH00066 64 FHWMNIFNFNINSSFKFDQYS----IIFLPIALFVTWsileFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLF 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 138 IGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSlitfeinNNSLTIICLL 217
Cdd:MTH00066 140 IGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLL-------NDNSTLPLLG 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 218 LFIGAIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQ 297
Cdd:MTH00066 213 LILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQ 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 298 NDLKKVIAYSTCSQLGYMVMVCGISGYSVGLFHLFNHAFFKALLFLSAGSIIHAVSDEQDMRKMGALIKTIPFTYIMILI 377
Cdd:MTH00066 293 NDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTI 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 378 GSLSLMGFPYLTGFYSKDLILELSFEKYYIILAFWLASSAAFLTAFYSIRLIYFTFIinsNAPKEV-FLKIHESSKIILF 456
Cdd:MTH00066 373 GSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSM---KFPRSLpLSPINENNPLIIN 449
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 457 PLALLAFGGIFLGYLgkeyfLSNIITPI------MPNSIKLVPLFFSLSGaglayFLLCYQINTLDNKVFKKTYhvIYTF 530
Cdd:MTH00066 450 PIKRLAWGSIIAGLL-----IIFNILPMkpqiltMPTFMKLAALLVTLLG-----LLIALDLAKITSKTTPKTK--MHSF 517
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 164421187 531 LNSAWQFNYVINHLIIKQIWKMGHVITYKLIDRGILEVIGPKGLSVVFVKLTQIISKLQSGLLFNYVLVIIIFTTFFIS 609
Cdd:MTH00066 518 SNLLAFFPTIIHRLSPKTNLNSGQNIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLITLLLMLI 596
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
30-614 |
1.08e-124 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 381.63 E-value: 1.08e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 30 IFTSNCIIISFLLSCYMYYEIILNFSPAYIRLWRWFDSELFTTYFGLQFDNLTATMLIIITSISALVHIYSIGYMAGDPH 109
Cdd:MTH00208 57 FSISLLKTLAFLSLINLLIWILLGCPNINISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPN 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 110 IPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDLGLVIALIMIFKEF 189
Cdd:MTH00208 137 KNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINF 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 190 GTLDFSIISSslitFEINNNSLTIICLL-LFIGAIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSL 268
Cdd:MTH00208 217 NSWNLNEILS----LNNSNSFLINILLFgILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPL 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 269 FECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISGYSVGLFHLFNHAFFKALLFLSAGSI 348
Cdd:MTH00208 293 ISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSI 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 349 IHAVSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILELSFEKYYIILAFWLASSAAFLTAFYSIRL 428
Cdd:MTH00208 373 IHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRI 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 429 IYFTFIINSNAPKevFLKIHESSKIILFPLALLAFGGIFLGYLGKEYFLSNIITpIMPNSIKLVPLFFSLSGAGLAYFLl 508
Cdd:MTH00208 453 IFFCFLNNPSFSP--LSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLPPL-TLPLILKSLPLIVTIIGAAFSFSF- 528
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 509 cyqINTLDNKVFKKTYhviYTFLNSAWQFNYVINHLIIKQIWKMGHVITYKLIDRGILEVIGPKGLSVVFVKLTQIISKL 588
Cdd:MTH00208 529 ---LLSLSSNPINSNF---FSFLSNQWFFVNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLT 602
|
570 580
....*....|....*....|....*.
gi 164421187 589 QSGLLFNYVLVIIIFTTFFISGFNIF 614
Cdd:MTH00208 603 QTGYIKQYLLSSTLLFLLILTLSLII 628
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
99-609 |
1.62e-124 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 380.35 E-value: 1.62e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 99 YSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDLGL 178
Cdd:MTH00108 103 FSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGF 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 179 VIALIMIFKEFGTLDFSIIssslitFEINNNSLTIICLLLFIGAIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAG 258
Cdd:MTH00108 183 ILAMAWFLLNLNSWDLQQI------FMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAG 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 259 VFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISGYSVGLFHLFNHAFFK 338
Cdd:MTH00108 257 VFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFK 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 339 ALLFLSAGSIIHAVSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILELSFEKYYIILAFWLASSAA 418
Cdd:MTH00108 337 AMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIAT 416
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 419 FLTAFYSIRLIYFTFIinsNAPK-EVFLKIHESSKIILFPLALLAFGGIFLGYLgkeyfLSNIITPI------MPNSIKL 491
Cdd:MTH00108 417 SLTAAYSTRIIFFALL---GQPRfPPLITINENNPLLINPIKRLLLGSIFAGFL-----ISNNIPPTtipqmtMPLYLKL 488
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 492 VPLFFSLSGaglayFLLCYQINTLDNKVFKKTYHVIYTFLNSAWQFNYVINHLIIKQIWKMGHVITYKLIDRGILEVIGP 571
Cdd:MTH00108 489 TALAVTILG-----FILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEKILP 563
|
490 500 510
....*....|....*....|....*....|....*...
gi 164421187 572 KGLSVVFVKLTQIISKlQSGLLFNYvlviiiFTTFFIS 609
Cdd:MTH00108 564 KTISLIQMKASTTISN-QKGLIKLY------FLSFLIT 594
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
62-607 |
1.59e-119 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 367.62 E-value: 1.59e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 62 WRWFDSELFTTYFGLQFDNLTatmlIIITSIsALVHIYSI-----GYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQL 136
Cdd:MTH00137 70 WNWMNTLTFDINISFKFDHYS----IIFTPI-ALYVTWSIlefasWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 137 FIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFS-IISSSlitfeiNNNSLTIIC 215
Cdd:MTH00137 145 FIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMAWMATNLNSWEIQqIFALS------KDFDLTLPL 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 216 LLLFIGAIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGV 295
Cdd:MTH00137 219 LGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCAL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 296 VQNDLKKVIAYSTCSQLGYMVMVCGISGYSVGLFHLFNHAFFKALLFLSAGSIIHAVSDEQDMRKMGALIKTIPFTYIMI 375
Cdd:MTH00137 299 TQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCL 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 376 LIGSLSLMGFPYLTGFYSKDLILELSFEKYYIILAFWLASSAAFLTAFYSIRLIYFTFI----INSNAPkevflkIHESS 451
Cdd:MTH00137 379 TIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMghprFNPLSP------INENN 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 452 KIILFPLALLAFGGIFLGYLgkeyFLSNII---TPI--MPNSIKLVPLFFSLSGaglayFLLCYQINTLDNKVFKKTYHV 526
Cdd:MTH00137 453 PAVINPIKRLAWGSIIAGLL----ITSNILplkTPVmtMPPLLKLAALIVTILG-----LLIALELASLTNKQFKPTPTL 523
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 527 I-YTFLNSAWQFNYVINHLIIKQIWKMGHVITYKLIDRGILEVIGPKGLSVVFVKLTQIISKLQSGLLFNYvLVIIIFTT 605
Cdd:MTH00137 524 PpHHFSNMLGFFPAIIHRLTPKLNLTLGQTIATQMVDQTWLEKTGPKGIASLQLPLITTTSNIQQGMIKTY-LTLFLLTL 602
|
..
gi 164421187 606 FF 607
Cdd:MTH00137 603 AL 604
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
4-433 |
1.69e-113 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 356.12 E-value: 1.69e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 4 LILFLPLLSAIV--SGLFGRKIGTKGA----GIFTSNCIIISFLLSCYMYYEIIlNFSPAYIRLWRWFDSELFTTYFGLQ 77
Cdd:CHL00025 10 IIPFLPLPVPMLigLGLLLFPTATKNLrrmwAFPSILLLSIVMIFSLNLSIQQI-NGSSIYQYLWSWTINNDFSLEFGYL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 78 FDNLTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTR 157
Cdd:CHL00025 89 IDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 158 IKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITFEINNNS----LTIICLLLFIGAIGKSAQLGLHT 233
Cdd:CHL00025 169 PIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVnllfATLCAFLLFLGPVAKSAQFPLHV 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 234 WLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLG 313
Cdd:CHL00025 249 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLG 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 314 YMVMVCGISGYSVGLFHLFNHAFFKALLFLSAGSIIHAV--------SDEQDMRKMGALIKTIPFTYIMILIGSLSLMGF 385
Cdd:CHL00025 329 YMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGI 408
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 164421187 386 PYLTGFYSKDLILELSFeKYYIILAfWLASSAAFLTAFYSIRLIYFTF 433
Cdd:CHL00025 409 PPLACFWSKDEILNDSW-LYSPIFA-IIAWSTAGLTAFYMFRIYLLTF 454
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
92-608 |
6.53e-98 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 310.54 E-value: 6.53e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 92 ISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTrIKANKAAIKAMLIN 171
Cdd:MTH00165 66 ISSMVIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQN-KKSYNAGMLTALSN 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 172 RVGDLGLVIALIMIFKeFGTLDFSiissSLITFEINNNSLTIICLLLFIGAIGKSAQLGLHTWLPDAMEGPTPVSALIHA 251
Cdd:MTH00165 145 RIGDVAILLSIAWMMN-FGSWNFI----FYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHS 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 252 ATMVTAGVFLIIRSSSLFEcSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISGYSVGLFHL 331
Cdd:MTH00165 220 STLVTAGVYLLIRFNNLLF-SSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 332 FNHAFFKALLFLSAGSIIHAVSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILELSFEKYYIILAF 411
Cdd:MTH00165 299 LTHALFKALLFLCAGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIF 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 412 WLASSAAFLTAFYSIRLIYFTFIINSNapKEVFLKIHESSKIILFPLALLAFGGIFLGYLGKEYFLSNIITPIMPNSIKL 491
Cdd:MTH00165 379 FLFFFSTGLTVSYSFRLIYYSMSGDFN--LKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKL 456
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 492 VPLFFSLSGAGLAYFLLCYQINtldNKVFKKTYHVIYTFLNSAWQFNYVINHLIIKQIWKMGHVItYKLIDRGILEVIGP 571
Cdd:MTH00165 457 LTLFVILLGGWLGYELSLMSLS---YNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLS-LKSFDQGWSEYFGG 532
|
490 500 510
....*....|....*....|....*....|....*..
gi 164421187 572 KGLSVVFVKLTQIISKLQSGLLFNYVLVIIIFTTFFI 608
Cdd:MTH00165 533 QGLYNFLKKLSKLIQWLQNNNLKIYLLSFLLWMIILL 569
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
39-611 |
1.80e-92 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 295.98 E-value: 1.80e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 39 SFLLSCYMYYEIILNFSpaYIRLWRWFDSELFTTYFGLQFDNLTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLS 118
Cdd:MTH00151 15 SVFLFPLLGYFGLNGIS--LIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVM 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 119 LFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRiKANKAAIKAMLINRVGDlGLVIALIMIFKEFGtlDFSIIS 198
Cdd:MTH00151 93 LFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNK-KSLSAGMLTALTNRIGD-VLILLSIALLVLLG--HWSILS 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 199 SSlitfeiNNNSLTIICLLLFIGAIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVV 278
Cdd:MTH00151 169 MW------DFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 279 VTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISGYSVGLFHLFNHAFFKALLFLSAGSIIHAVSDEQDM 358
Cdd:MTH00151 243 LLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDI 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 359 RKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILELSFEKYYIILAFWLASSAAFLTAFYSIRLIYftFIINSN 438
Cdd:MTH00151 323 RLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSF--CLVWGS 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 439 APKEVFLKIHESSKIILFPLALLAFGGIFLGYLGKEYFLSNIITPIMPNSIKLVPLFFSLSGAGLAYFLlcyqintLDNK 518
Cdd:MTH00151 401 MKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGF-------WDSG 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 519 VFKKTYHVIYTFLNSAWqFNYVINHLIIKQIWKMGHVITYKLIDRGILEVIGPKGLSVVFVKLTQIISKLQSgLLFNYVL 598
Cdd:MTH00151 474 FSSSKMVKLSFFFSSMW-FLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPV-KWFNFFI 551
|
570
....*....|...
gi 164421187 599 VIIIFTTFFISGF 611
Cdd:MTH00151 552 GLILLLVLFLVVI 564
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
40-608 |
1.10e-84 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 275.76 E-value: 1.10e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 40 FLLSCYMYYEIILNFSPAYIRLWRWFDSELFTTYFGLQFDNLTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSL 119
Cdd:MTH00209 12 LFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 120 FTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRiKANKAAIKAMLINRVGDLGLVIALImifkefGTLDFSiiSS 199
Cdd:MTH00209 92 FILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNS-KSLSAGMLTALTNRVGDALLILSIA------WMLMHG--NW 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 200 SLITFEINNNSLTIICLLLFIGAIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVV 279
Cdd:MTH00209 163 NIFYLNFNSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 280 TIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISGYSVGLFHLFNHAFFKALLFLSAGSIIHAVSDEQDMR 359
Cdd:MTH00209 243 LLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIR 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 360 KMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILELSFEKYYIILAFWLASSAAFLTAFYSIRLIYFTFIINSNA 439
Cdd:MTH00209 323 MVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSS 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 440 PKevFLKIHESSKIILFPLALLAFGGIFLGYLGKEYFLSNIITPIMPNSIKLVPLFFSLSGAGLAYFLlcyqintLDNKV 519
Cdd:MTH00209 403 KS--LNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMV-------LKKNF 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 520 FKKTYHVIYTFLNSAWQFNYVINHLIIKQIWKMGHViTYKLIDRGILEVIGPKGLSVVFVKLTQIISKLQSGLLFNYVLV 599
Cdd:MTH00209 474 FLIKGYKVNYFLSQMWFLPDLSSQPVNKFTMKLSKT-MLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTF 552
|
....*....
gi 164421187 600 IIIFTTFFI 608
Cdd:MTH00209 553 MMLILLGVI 561
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
92-608 |
1.08e-77 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 257.39 E-value: 1.08e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 92 ISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWlTRIKANKAAIKAMLIN 171
Cdd:MTH00207 69 ISANVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYY-QNPKSLGAGMITALTN 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 172 RVGDlglVIALIMIFKEFGTLDFSIISssliTFEINNNSLTIICLLlfIGAIGKSAQLGLHTWLPDAMEGPTPVSALIHA 251
Cdd:MTH00207 148 RIGD---VMLLLSIGWTLNQGHWSITN----MWQTDMNNYIALSIM--IAAMTKSAQMPFSSWLPAAMAAPTPVSALVHS 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 252 ATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISGYSVGLFHL 331
Cdd:MTH00207 219 STLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 332 FNHAFFKALLFLSAGSIIHAVSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILELSF---EKYYII 408
Cdd:MTH00207 299 ITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLfypHNSLMI 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 409 LAFWLASSaafLTAFYSIRLIYFTFIINSNAPKevFLKIHESSKIILFPLALLAFGGIFLGYLGKEYFLSNIITPIMPNS 488
Cdd:MTH00207 379 LMIFLATA---LTAAYSTRFTLAVLWSPNSSSP--YHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQ 453
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 489 IKLVPLFFSLSGAGLAYFLLCYQINtldNKVFKKTYHVIYTFLNSAWQFNYVINHLIIKQIWKMGHVITyKLIDRGILEV 568
Cdd:MTH00207 454 YKLLPLLVVTLGALLAWLFTTPNIT---KTPLLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYL-KLLDQGWLEM 529
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 164421187 569 IGPKGLSVVFVKLTQIISKLQSGLLFNYVLVIIIFTTFFI 608
Cdd:MTH00207 530 LGAQGTFKMFSRSSNNVMKLQKNIPNNYLMMSFVLLTIII 569
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-432 |
1.92e-68 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 228.88 E-value: 1.92e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 1 MYILILFLPLLSAIVSGLFGRKigTKGAGIFTSNCIIISFLLSCYMYYEIILNFSPAYiRLWRWFdselftTYFGLQF-- 78
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLGRR--RRLQRALSLLASLALLALALALLLQVLAGGPLVY-ALGGWP------APFGIVLva 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 79 DNLTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRi 158
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 159 KANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLItfEINNNSLTIICLLLFIGAIGKSAQLGLHTWLPDA 238
Cdd:COG0651 154 EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLA--ELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDA 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 239 M-EGPTPVSALIHAAtMVTAGVFLIIRSSSLF---ECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGY 314
Cdd:COG0651 232 YpAAPSPVSALLSGL-LTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGY 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 315 MVM---VCGISGYSVGLFHLFNHAFFKALLFLSAGSIIHAvSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGF 391
Cdd:COG0651 311 ILLglgLGTPLGLAGALFHLLNHALAKALLFLAAGAIERA-TGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGF 389
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 164421187 392 YSKDLILELSFEKYYIILAFWLASSAAfLTAFYSIRLIYFT 432
Cdd:COG0651 390 VSKWLLLQAALEAGAWLLAAVLLLSSL-LTLAYFVRIFGRA 429
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
62-469 |
1.25e-66 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 231.73 E-value: 1.25e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 62 WRWFDSelFTTYFGLQFDNLTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWE 141
Cdd:PRK12647 48 YAWVPS--LGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWE 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 142 GVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFS-IISSSLItfeINNNSLTI-ICLLLF 219
Cdd:PRK12647 126 LTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSeLLASGDV---IREHPLYLaILLLVL 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 220 IGAIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQND 299
Cdd:PRK12647 203 GGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTD 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 300 LKKVIAYSTCSQLGYMVMVCGI-SGYSVGLFHLF--NHAFFKALLFLSAGSIIHAVSdEQDMRKMGALIKTIPFTYIMIL 376
Cdd:PRK12647 283 LKLILAYSTVSALGTLVMLLGLgSELAIKAAVLFlvAHSLYKGALFMVAGIIDHETG-TRDITKLGGLRRAMPITAAAAL 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 377 IGSLSLMGFPYLTGFYSKDLILELSFEKYYIILAFwlaSSAAFLTAfysIRLIYFTFIIN----SNAPKEVFLKIHESSK 452
Cdd:PRK12647 362 LAALSMAGLPPLFGFLAKELIYEALLEAPLWSLIL---TVAAVLGN---ALMVAVAFLVGikpfLGKLVETPKHPHEAPV 435
|
410
....*....|....*..
gi 164421187 453 IILFPLALLAFGGIFLG 469
Cdd:PRK12647 436 LMWLGPAVLAVLGLLFG 452
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
74-471 |
3.18e-65 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 230.97 E-value: 3.18e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 74 FGLQFDNLTATMLIIITSISALVHIYSIGYMA-GDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLIN 152
Cdd:PRK12644 68 LAFRLDALAALMSLLVLGVGALVLLYCARYFDdDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIG 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 153 FWLTRIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTldFSIisSSLITFEINNNSLTIICLLLFIGAIGKSAQLGLH 232
Cdd:PRK12644 148 HYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGT--YRL--SELLADPPTGPAVSVAVVLILVGALSKSAIVPFH 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 233 TWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQL 312
Cdd:PRK12644 224 FWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQL 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 313 GYMVMVCGISGYSV---GLFHLFNHAFFKALLFLSAGSIIHAvSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLT 389
Cdd:PRK12644 304 GFLTVLVGIGTRDAalaGLAMLLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLL 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 390 GFYSKDLILElSFEKY-------YIILAFWLASSAafLTAFYSIRLIYFTFIINSNA-PKEVFLKIHESSKIILFPLALL 461
Cdd:PRK12644 383 GFVAKEAALE-AVLHDgalgpagPVVLAGIVLGSI--LTVAYSLRFLWGAFARKPGAfPSVAVTEMHRPSPLFLAPPAVL 459
|
410
....*....|
gi 164421187 462 AFGGIFLGYL 471
Cdd:PRK12644 460 AVLGLVLGLL 469
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
130-411 |
5.23e-63 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 209.86 E-value: 5.23e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 130 SDNYLQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSsLITFEINNN 209
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSK-ALTGGLNSS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 210 SLTIICLLLFIGAIGKSAQLGLHTWLPDA-MEGPTPVSALIhAATMVTAGVFLIIRSSSLFECSS-IALVVVTIIGALTA 287
Cdd:pfam00361 80 GLLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSpFIQQILLILAIISM 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 288 FFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGIS---GYSVGLFHLFNHAFFKALLFLSAGSIIHAVSDEQDMRKMGAL 364
Cdd:pfam00361 159 LLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGL 238
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 164421187 365 IKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILELSFEKYYIILAF 411
Cdd:pfam00361 239 AKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVL 285
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
3-483 |
3.07e-61 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 217.39 E-value: 3.07e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 3 ILILFLPLLSAIVSGLFgRKIGTKGAGIFTSNCIIISFLLSCYMYYEIILNFSPAYIRLWRWFDSELFTTYFglqfDNLT 82
Cdd:PRK12649 8 VLAIFLPFILAWTVPVL-EKVLKQRIGWFAAAIAFTSFALIAQVAPEVIHGTIITGSISWLPSAGVEFSIYA----DGLA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 83 ATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIKANK 162
Cdd:PRK12649 83 VLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVY 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 163 AAIKAMLINRVGDLGLVIALIMIFKEFGTLDFS-IISSSLITFEINNNSLTIICL-LLFIGAIGKSAQLGLHTWLPDAME 240
Cdd:PRK12649 163 GATKSLLITAGGGLFMFAGFLLLHVITGTYDIAtILQDSELIENIKGHPLFLITLiLIFIGAAAKSAQGPFYIWLPNAME 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 241 GPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCG 320
Cdd:PRK12649 243 APTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYG 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 321 IS-------GYSVGLFHLFNHAFFKALLFLSAGSIIHAVSdEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYS 393
Cdd:PRK12649 323 YTtyhepglGVAAATFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLS 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 394 KDLILELSFEKYYIILAFW------LASSAAFLTAFYSIRLIYFTFiINSNAPKEVFLKIHESSKIILFPLALLAFGGIF 467
Cdd:PRK12649 402 KEMFYETSVEMGALIGGPFtiiipaVAVLGGVFTFAYSIKLIDGIF-LGERTHDHLPHHIHEAPYVMLIPAAFLAGLVIL 480
|
490
....*....|....*.
gi 164421187 468 LGyLGKEYFLSNIITP 483
Cdd:PRK12649 481 FG-LVPSIPIHNIIEP 495
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-463 |
8.28e-61 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 218.14 E-value: 8.28e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 1 MYILILFLPLLSAIVSGLF---GRKIGTKGAGIFTsnciIISFLLSCYMYYEIilnFSPAYIRL-WRWFDSelfttyFGL 76
Cdd:PRK12648 2 SLLLLVLLPFLGALLAALLprnARNAEAWLAGLVA----LAALVLLALLYPAV---AAGEVIRAeIEWLPA------LGL 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 77 QF----DNLTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLIN 152
Cdd:PRK12648 69 NLslrlDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIG 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 153 FWLTRIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITfeINNNSLTIICLLLF-IGAIGKSAQLGL 231
Cdd:PRK12648 149 YWHHRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVVLAAGDL--IRAHPLYPPALVLIlLGAFTKSAQFPF 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 232 HTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQ 311
Cdd:PRK12648 227 HFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISH 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 312 LGYMVMVCGI-SGYSV--GLFHLFNHAFFKALLFLSAGSIIHAvSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYL 388
Cdd:PRK12648 307 LGLITLLLGLgSPLAAvaAIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLL 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 389 TGFYSKDLILElsfEKYYIILAFWL-------ASSAAFLTAFYSIRLIYFTFIinSNAPKEVFLKIHESSKIILFPLALL 461
Cdd:PRK12648 386 NGFLSKEMFFA---ETLDTHLLGSLdwllpvaATLAGAFSVAYSLRFIHDVFF--GPPPDDLPKTPHEPPRWMRAPVELL 460
|
..
gi 164421187 462 AF 463
Cdd:PRK12648 461 VL 462
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
74-469 |
1.59e-60 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 215.48 E-value: 1.59e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 74 FGLQFDNLTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINF 153
Cdd:TIGR00940 69 FTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISY 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 154 WLTRIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTldFSIISSSLITFEINNNSLTIICLLL-FIGAIGKSAQLGLH 232
Cdd:TIGR00940 149 WHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGS--FSIDAVIASADAIRNSPLFGTAMVLvLLGAFTKSAQFPFH 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 233 TWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQL 312
Cdd:TIGR00940 227 IWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 313 GYMVMVCGISGYSV----------------GLFHLFNHAFFKALLFLSAGSIIHAvSDEQDMRKMGALIKTIPFTYIMIL 376
Cdd:TIGR00940 307 GLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAM 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 377 IGSLSLMGFPYLTGFYSKDLILELSFEKYYI---------ILAFWLASSAAFLTAFYSIRLIYFTFiINSNAPKEVFLKI 447
Cdd:TIGR00940 386 IASAAMAGVPPFNGFLSKEMFFAEAITAHLVnpfdtvtlgYLFPYVATVASVFTFVYSLRFIHGVF-FGRPKPEDLPRKP 464
|
410 420
....*....|....*....|..
gi 164421187 448 HESSKIILFPLALLAFGGIFLG 469
Cdd:TIGR00940 465 HEPPRWMLASPDILVLLVLVFG 486
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
74-482 |
2.97e-59 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 213.75 E-value: 2.97e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 74 FGLQFDNLTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINf 153
Cdd:PRK12650 73 LALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIA- 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 154 wLTRIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSliTFEINNNSLT-IICLLLFIGAIGKSAQLGLH 232
Cdd:PRK12650 152 -RSGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHS--DVWAEKPGLTtVVAVLIAVAAFTKSAQFPFH 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 233 TWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQL 312
Cdd:PRK12650 229 FWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQL 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 313 GYMVMVCGIS---GYSVGLFHLFNHAFFKALLFLSAGSIIHAvSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLT 389
Cdd:PRK12650 309 GWIVATIGVGtpfALTAAVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLF 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 390 GFYSK----DLILELSFEKYYIILAFWLASSAAFLTAFYSIRLIYFTFIINSNAPKEVflkiHESSKIILFPLALLAF-- 463
Cdd:PRK12650 388 GFVSKegmlTAFLEAPGGNAGVVLLLVGAALGAVFTFAYSARLVLGAFVDGPRDMSHV----KEAPVSLWLPAALPGAls 463
|
410 420
....*....|....*....|.
gi 164421187 464 --GGIFLGYLgkEYFLSNIIT 482
Cdd:PRK12650 464 lpLGLVPGLL--DAPVSAAAT 482
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
3-423 |
1.02e-58 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 204.05 E-value: 1.02e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 3 ILILFLPLLSAIVSG-LFGRKigTKGAGIFTSNCIIISFLLSCYMYYEIilNFSPAYIRLWRWFDSELFttyfGLQFDNL 81
Cdd:PRK06525 5 LLTLLLPFIGALVVFfLPGRR--AAELGVLFAALTTLCMLSLAYAFYQA--GKVAVTLTLVNLGDVALF----GLVIDPV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 82 TATMLIIITSISALVHIYSIGYMA-------GDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFW 154
Cdd:PRK06525 77 SVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYY 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 155 LTRiKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSslitfeINNNSLTIICLLLFIGAIGKSAQLGLHTW 234
Cdd:PRK06525 157 QSP-KALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSG------LHGSLKYLVFLGILFAAWGKSAQLPFYSW 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 235 LPDAMEGPTPVSALIHAATMVTAGVFLIIRS-SSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLG 313
Cdd:PRK06525 230 LPDAMEAPTPASAYLHAASMVKVGVYIFARAiQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLG 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 314 YMVMVCGIS------GYSVGLFHLFNHAFFKALLFLSAGSIIHAVSdEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPY 387
Cdd:PRK06525 310 YMFFGLSLAilgsrlALEGSIAYIFNHAFAKSLFFLVAGALSYSCG-TRLLPRLRGVLKKLPLVGVGFCVAALAITGVPP 388
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 164421187 388 LTGFYSKDLILELSFEKYYIILAFW------LASSAAFLTAF 423
Cdd:PRK06525 389 FNGFFSKFPIFAAGFELSVEYWILLpamvllLIESVASFAWF 430
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
74-469 |
2.09e-58 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 209.78 E-value: 2.09e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 74 FGLQFDNLTATMLIIITSISALVHIYSIGYMAGDPH-IPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLIN 152
Cdd:PRK12645 72 FTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEqLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLIS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 153 FWLTRIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTldFSIISSSLITFEINNNSLTIICLLLF-IGAIGKSAQLGL 231
Cdd:PRK12645 152 YWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGS--FSIREMIANADEIQNSPLFIPAMILIlLGAFTKSAQFPF 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 232 HTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQ 311
Cdd:PRK12645 230 YIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQ 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 312 LGYMVMVCGISG------------YSVG----LFHLFNHAFFKALLFLSAGSIIHAVSdEQDMRKMGALIKTIPFTYIMI 375
Cdd:PRK12645 310 LGLIMSLLGIGAaslhyqgddskiYAAAitaaIFHLINHATFKGSLFMIVGIVDHETG-TRDIRKLGGLMTIMPITFTIA 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 376 LIGSLSLMGFPYLTGFYSKDLILE----------LSFEKYYIILAF--WLASSAAFLtafYSIRLIYFTFiINSNAPKEV 443
Cdd:PRK12645 389 LIGALSMAGLPPFNGFLSKEMFFEsmlnateanlFSLDTWGVLFPViaWVASVFTFV---YSIIFIFKTF-FGKYKPEQL 464
|
410 420
....*....|....*....|....*.
gi 164421187 444 FLKIHESSKIILFPLALLAFGGIFLG 469
Cdd:PRK12645 465 PKKAHEAPIGMLISPIILASLVVVFG 490
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
74-449 |
9.77e-55 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 199.21 E-value: 9.77e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 74 FGLQFDNLTATMLIIITSISALVHIYSIGYMA-GDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLIN 152
Cdd:PRK12646 72 LDLRLDGLSLMFSLIISLIGIAVFFYATQYLSsRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLIS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 153 FWLTRIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSliTFEINNNSLTI-ICLLLFIGAIGKSAQLGL 231
Cdd:PRK12646 152 YWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQ--ADHIKNHGLFIpMIFMFLLGAFTKSAQFPF 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 232 HTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQ 311
Cdd:PRK12646 230 HIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQ 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 312 LGYMVMVCGISG-----------------YSVGLFHLFNHAFFKALLFLSAGSIIHAvSDEQDMRKMGALIKTIPFTYIM 374
Cdd:PRK12646 310 LGMIMAMVGIGGgyaqhqqdaiasiyvfvLFAALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLV 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 375 ILIGSLSLMGFPYLTGFYSKDLIL-------ELS-FEKYYIILAFWLASSAAFLTAFYSIRLIYFTFIINSNAPKEVFLK 446
Cdd:PRK12646 389 MTIAALSMAGVPFLNGFLSKEMFLdaltqtgQLSqFSLISMIIIVFIGVIASIFTFTYALYMVKEVFWGKYDSKVFTKKN 468
|
...
gi 164421187 447 IHE 449
Cdd:PRK12646 469 IHE 471
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
4-427 |
5.53e-51 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 185.88 E-value: 5.53e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 4 LILFLPLLSAIVS-----GLFgRKIGTKGAGIFTSNCIIISFLLSCYMYYEIiLNFSPAYIRlWRWFDSELFTTYFGLQF 78
Cdd:PRK07390 11 LIPLYGLIGALLSlpwspGII-RRTGPRPAAYLNLLMTLLAFVHSLLALRAI-WNQPPQQLS-FPWLQVADLDLSLSLEI 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 79 DNLTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRI 158
Cdd:PRK07390 88 SPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQP 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 159 KANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITFEINNNSLTIICLLLFIGAIGKSAQLGLHTWLPDA 238
Cdd:PRK07390 168 LVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAATANLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEA 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 239 MEGPTPVSALIHAAtMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMV 318
Cdd:PRK07390 248 MEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIA 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 319 CGISGYSVGLFHLFNHAFFKALLFLSAGSIIhAVSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLIL 398
Cdd:PRK07390 327 VGLQQPDIALLLLLTHAIAKALLFMSVGSII-LTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLA 405
|
410 420
....*....|....*....|....*....
gi 164421187 399 ELSFEKYYIILAFWLASSAafLTAFYSIR 427
Cdd:PRK07390 406 DGLWAVSPWLVGVLLLVNA--LTAFNLTR 432
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
79-469 |
4.09e-49 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 178.15 E-value: 4.09e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 79 DNLTATMLIIITSISALVHIYSIGYmaGDPHIPRFMA-YLSLFTFLMIVLVTSDnYLQLFIGWEGVGLCSYLLINFWLTR 157
Cdd:PRK08375 76 DSLSALFLLVTSILAIAALLYAIGY--GEHRQTRFYAlFLLLLAGLLGALLTAD-LFNLFVFLEIMSLSSYALVAMGGDR 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 158 iKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITfeinNNSLTIICLLLFIGAIGKSAQLGLHTWLPD 237
Cdd:PRK08375 153 -RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAE----NPTVVTAFGFVLLALALKAAVFPLHTWLPR 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 238 AMEGPTPVSALIHAATMVTAGVFLIIRSSSL-----FECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQL 312
Cdd:PRK08375 228 AYPAAPPVVTALLSGLVTKVAVYALIRIYFTvfggdFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQM 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 313 GYMVMVCGIS---GYSVGLFHLFNHAFFKALLFLSAGSIIHAVSdEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLT 389
Cdd:PRK08375 308 GYILLGLALLtplALAAGLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTS 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 390 GFYSKDLILELSFEKY-YIILAFWLASSaaFLTAFYSIRLIYFTFIinSNAPKEVFLKIHESSKIILFPLALLAFGGIFL 468
Cdd:PRK08375 387 GFVSKWYLVVGAVEAGqWLVLAVLLASS--LLALLYFLRIWYRAFF--GPPPPGSEAPKQEAPLGMLAPSLALALLSLLL 462
|
.
gi 164421187 469 G 469
Cdd:PRK08375 463 G 463
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-469 |
4.84e-47 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 173.36 E-value: 4.84e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 4 LILFLPLLSAIVSGLFGRkIGTKGAGIFTSNCIIISFLLSCYMYYE------IILNFSPAYIRLWRWFDSELFTTYFGLQ 77
Cdd:PRK08376 9 LLIIIPLFGAFSMPIVSL-LGGKAREIWAVLISFLTLIVALLVFYEvwnngtIVYVLGAESPTLTLPFGSGGFPIRIIWE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 78 FDNLTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTR 157
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 158 IKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLItfeINNNSLTIICLLLFIGAIG-KSAQLGLHTWLP 236
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMS---ENPTVVAKIALALFIAGLAmKSGAVPVHMWLP 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 237 DAM-EGPTPVSALIHAATMvtAGVFLIIRSSSLFECSSIALV----VVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQ 311
Cdd:PRK08376 245 DAYpAAPSSISAMLLVIKQ--AGLYALARVLFSIYGPAINLAtvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQ 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 312 LGYMVMVCGIS---------------GYSVGLFHLFNHAFFKALLFLSAGSIIHAVSdEQDMRKMGALIKTIPFTYIMIL 376
Cdd:PRK08376 323 IGYMLLGLGVGlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLARTMPKTTIAFL 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 377 IGSLSLMGFPYLTGFYSKDLILELSFEKYYIILAFWLASSAAFLTAFysIRLIYFTFIinsNAPKEVFLKIHESSKIILF 456
Cdd:PRK08376 402 IGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASF--VKVFHTAFF---GPPSEKVMNVKEPPKPMLV 476
|
490
....*....|...
gi 164421187 457 PLALLAFGGIFLG 469
Cdd:PRK08376 477 PMLILAIAIIGMG 489
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
79-485 |
3.60e-44 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 165.14 E-value: 3.60e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 79 DNLTATMLIIITSISALVHIYSIGYMAG-DPHIPRFMAYLSLFTFLMIVLVTSDNYlQLFIGWEGVGLCSYLLINFWLTR 157
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHeSGPEWYYTLLLGLEAGMLGILLTGDAF-NLFVMLEVLSISAYGLVAYYRDR 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 158 IKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTL---DFSIISSSLITFEINNNSLTIICLLLFIGAI------GKSAQ 228
Cdd:PRK12667 160 GDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLnmaDLSAKIRGLSFPLTGGLAGNPPLALGVALALalwaftIKAAI 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 229 LGLHTWLPDAM-EGPTPVSALIhAATMVTAGVFLIIR--------SSSLFECSSIALVVVTIIGALTAFFAATVGVVQND 299
Cdd:PRK12667 240 FPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRflytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 300 LKKVIAYSTCSQLGYMVMVCGIS---GYSVGLFHLFNHAFFKALLFLSAGSIIHAVsDEQDMRKMGALIKTIPFTYIMIL 376
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGtqlGLAAALFHIINHAIAKSLLFLASGVFIHAA-GTRDIDELAGLGRKMPIASFAFL 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 377 IGSLSLMGFPYLTGFYSKDLILELSFEKYYIILAFWLASSAAFlTAFYSIRLIYFTFIINSNAPKEVFLKIHESSKIILF 456
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAI-SLVGYFRAWYSLFFGKPKSGEEVEHKESPSMSVVIL 476
|
410 420 430
....*....|....*....|....*....|
gi 164421187 457 PLALLAFG-GIFLGYLgkEYFLSNIITPIM 485
Cdd:PRK12667 477 VLALAVLIlGILALFL--PEILDSLIEPAA 504
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
62-349 |
1.25e-42 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 160.63 E-value: 1.25e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 62 WRWFDSELfttyfgLQFDNLTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWE 141
Cdd:PRK08168 57 AAWPAAAW------LEVSGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWA 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 142 GVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITFEINNnSLTIICLLLFIG 221
Cdd:PRK08168 131 AISLALHRLLCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHLAAQGASP-SLQAAALLLVLA 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 222 AIGKSAQLGLHTWLPDAMEGPTPVSALIHAAtMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLK 301
Cdd:PRK08168 210 VILKTAQLPVHGWLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIK 288
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 164421187 302 KVIAYSTCSQLGYMVMVCGISGYSVGLFHLFNHAFFKALLFLSAGSII 349
Cdd:PRK08168 289 VRLAWSTVAQMGFMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
74-398 |
4.89e-42 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 161.21 E-value: 4.89e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 74 FGLQFDNLTATMLIIITSISALVHIYSIGYM-AGDPHIPRFM-AYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLI 151
Cdd:PRK06521 74 FHLRLDALSAFFLLVISLLGAAASLYSLGYFrEYEGKGPGAMgFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLV 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 152 NFWLTRIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDF-SIISSSLITFeinnnSLTIICLLLFIGAIGKSAQLG 230
Cdd:PRK06521 154 IANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFaAMRAAHLSPF-----WASLVFLLALFGFGAKAGLVP 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 231 LHTWLPDAM-EGPTPVSALIhAATMVTAGVFLIIRSSSLFECSSIAL--VVVTIIGALTAFFAATVGVVQNDLKKVIAYS 307
Cdd:PRK06521 229 LHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWWwgVLVLALGAISAVLGVLYALAEHDLKRLLAYS 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 308 TCSQLGYMVMVCGIS--------------GYSVGLFHLFNHAFFKALLFLSAGSIIHAVSdEQDMRKMGALIKTIPFTYI 373
Cdd:PRK06521 308 TIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATG-TRDMEKLGGLIRRMPWTAW 386
|
330 340
....*....|....*....|....*
gi 164421187 374 MILIGSLSLMGFPYLTGFYSKDLIL 398
Cdd:PRK06521 387 AFLIGCLAISALPPLNGFVSEWLLL 411
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
86-434 |
6.56e-39 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 150.45 E-value: 6.56e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 86 LIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWlTRIKANKAAI 165
Cdd:MTH00095 51 SLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFY-NNWDSNSGAM 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 166 KAMLINRVGDLGLVIALI-MIFKEFGTLDFSIISSSLItfeinnnsltiicLLLFIGAIGKSAQLGLHTWLPDAMEGPTP 244
Cdd:MTH00095 130 NTALTNRIGDFFIFLFFSgFIFSSYYFFSFSFFSSSMI-------------LMLLLTSFTKSAQFPFSSWLPKAMSAPTP 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 245 VSALIHAATMVTAGVFLIIRSSSLFEcSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISGY 324
Cdd:MTH00095 197 VSSLVHSSTLVTAGLILLMNFSYLIL-NMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLS 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 325 SVGLFHLFNHAFFKALLFLSAGSIIHAVSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILELSFEK 404
Cdd:MTH00095 276 FVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFN 355
|
330 340 350
....*....|....*....|....*....|
gi 164421187 405 YYIILAFWLASSAAFLTAFYSIRLIYFTFI 434
Cdd:MTH00095 356 NYMIFFSLMFFFSVFLTFGYSYRLWKSFFL 385
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
4-469 |
3.42e-38 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 147.54 E-value: 3.42e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 4 LILFLPLLSAIVSGLFGRKIGT--KGAGIFTSnciIISFLLSCYMYyeiiLNFSPAYIRL-----WRWFDSelFTTYFGL 76
Cdd:COG1008 8 LLILLPLLGALLLLLLPRRNARlaRWVALAVS---LLTLLLSLYLL----AGFDPGTGGFqfvesYPWIPS--LGISYHL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 77 QFDNLTATMLIIITSISALVHIYSIGYMAGDPHipRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLT 156
Cdd:COG1008 79 GVDGISLPLVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 157 RiKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIisSSLITFEINNNSLTIICLLLFIG-AIgKSAQLGLHTWL 235
Cdd:COG1008 157 E-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDI--AELAAAPLPLTAQLLLFLAFFIAfAV-KVPMFPFHTWL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 236 PDA-MEGPTPVSAlIHAATMVTAGVFLIIR-SSSLF-ECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQL 312
Cdd:COG1008 233 PDAhVEAPTAGSV-LLAGVLLKMGGYGLLRfALPLFpEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHM 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 313 GYMVMvcGIS-----GYSVGLFHLFNHAFFKALLFLSAGSIIHAVSDeQDMRKMGALIKTIPFTYIMILIGSLSLMGFPY 387
Cdd:COG1008 312 GFVLL--GIFalnplGLQGAVLQMVSHGLITAALFLLVGVLYDRTHT-RDIADLGGLAKRMPVLAALFLLAALASLGLPG 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 388 LTGFYSKDLILELSFeKYYIILAFwLASSAAFLTAFYSIRLIYFTFIinsNAPKEVFLKIHESSKIILFPLALLAFGGIF 467
Cdd:COG1008 389 TSGFVGEFLVLLGAF-QVNPWLAI-LAALGLILTAAYLLWMYQRVFF---GPLKEELAELPDLNPRELAVLAPLAALILL 463
|
..
gi 164421187 468 LG 469
Cdd:COG1008 464 LG 465
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
4-469 |
8.03e-35 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 139.36 E-value: 8.03e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 4 LILFLPLLSAIVSgLFGRKIGTKGAGIFtsNCIIISFLLSCYMYYEIilnfsPAYIRLWrwfdseLFTTYFGLQF--DNL 81
Cdd:PRK08668 5 LLLLTPLIGSVLA-YLLKKINEKIGVIG--NALPLLFLIKLYFTLKV-----GTGEKLT------LFFGGFKLTFtlTHL 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 82 TATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLvtSDNYLQLFIGWEGVGLCSYLLInfWLTRIKAN 161
Cdd:PRK08668 71 SWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAGVLGVFL--ANDLLTLYIFWEIMTFSSFMMV--PMGKKESR 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 162 KAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITfEINNNSLTIICLLLFIGAIGKSAQLGLHTWLPDAM-E 240
Cdd:PRK08668 147 KASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLIN-DTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYsE 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 241 GPTPVSALIHAAtMVTAGVFLIIRSSSLFECSSIALVVVTI------------IGALTAFFAATVGVVQNDLKKVIAYST 308
Cdd:PRK08668 226 APQSFSAVLSGQ-LSKLGAYGFLLVLYVLPGTKLFSEFGTYrgvplfnyilawLGNISIIVGTLMAILQEDIKKLIAYSS 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 309 CSQLGYMVMVCGIS---GYSVGLFHLFNHAFFKALLFLSAGSIIHAvSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGF 385
Cdd:PRK08668 305 VANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFAAVIYR-TGTTKISEMGGLIEKMPFTFAMYLVAIISLAGI 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 386 PYLTGFYSKDLILELSFEKYYIILAF--WLASSAAFLtafYSIRLIYFTFIinsNAPKEVFLKIHESSKIILFPLALLAF 463
Cdd:PRK08668 384 PPMSGFASKWLIFEALISKGMPITAFmaFFGSIGSFL---YVFRPLAGVFL---GQLPSDHKDVKEAPLPMLIPMAILVL 457
|
....*.
gi 164421187 464 GGIFLG 469
Cdd:PRK08668 458 LNVVFG 463
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
133-433 |
2.55e-34 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 137.72 E-value: 2.55e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 133 YLQLFIGWEGVGLCSYLLInfWLTRIK-ANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITFEinnnsl 211
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLV--WARGTKaAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGTAA------ 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 212 tiicLLLFIGAIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFEcssiALVVvtiIGALTAFFAA 291
Cdd:PRK12668 187 ----WLILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTE----LLIY---IGAAMAVYGV 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 292 TVGVVQNDLKKVIAYSTCSQLGYMVMVCGIsGYSVGL----FHLFNHAFFKALLFLSAGSIIHAVSdEQDMRKMGALIKT 367
Cdd:PRK12668 256 FFALLENDLRRLLSYHIVSQVGYMVAGIGI-GTALAIngavAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRS 333
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 164421187 368 IPFTYIMILIGSLSLMGFPYLTGFYSKDLILELSFEKYYIILAF--WLASSAAFLTAfySIRLIYFTF 433
Cdd:PRK12668 334 MPLTALFCLVGALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLllLLASAGTFLHF--GIKLPYFAF 399
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
75-470 |
1.44e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 131.48 E-value: 1.44e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 75 GLQFDNLTATMLIIITSISALVHIYSIGYMAGD--PHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLIN 152
Cdd:PRK06589 78 GLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIG 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 153 FWLTRIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFsiISSSLITFeinnnSLTIICLLLFIGAIGKSAQLGLH 232
Cdd:PRK06589 158 HTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDF--VSGGLFSK-----NQSIILLLMFIYGIAKTAIFPVH 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 233 TWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGAL------TAFFAATVGVVQNDLKKVIAY 306
Cdd:PRK06589 231 SWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLifipivSIFYSSLKALKTDNIKKILAY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 307 STCSQLGYMVMVCGI---SGYSVGLFHLFNHAFFKALLFLSAGSIIhAVSDEQDMRKMGALIKTIPFTYIMILIGSLSLM 383
Cdd:PRK06589 311 STISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFIISISSLSLI 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 384 GFPYLTGFYSKDLILELSFEKYYIILAFWLA---SSAAFLTAFYSIRLIYFTFIINSNapKEVFLKihESSKIILFPLAL 460
Cdd:PRK06589 390 GIPIFSGFISKFLILLAASEQNQPWLSIIVMlvvIASSILSALYLLKILSSIYKPSLS--ENSFIT--KSLPYLMQISVI 465
|
410
....*....|
gi 164421187 461 LAFGGIFLGY 470
Cdd:PRK06589 466 TCCCALTLFY 475
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
3-405 |
4.72e-32 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 131.39 E-value: 4.72e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 3 ILILFLPLLSAIVSGLFGRKIGTKGAGIFTsnCIIISFLLSCYMYYEIILNFSPAYIRLWRWFDSELFTtyfgLQFDNLT 82
Cdd:PRK08667 6 FLGAILLLLAAAVIPLVFRHKRKRVWQSVL--WLVIAIALLLFAGSLQLFTGNPLDIPLWGIAPGLDIT----FHIDRLA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 83 ATMLIIITSISALVHIYSIGY---MAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIK 159
Cdd:PRK08667 80 AFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 160 ANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSlitfeinNNSLTIICLLLFIGAIGKSAQLGLHTWLPDAM 239
Cdd:PRK08667 160 TQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGAS-------AGILSLVFLLLFLGFGIKAGIIPFHKWLPYAH 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 240 EG-PTPVSALIhAATMVTAGVFLIIRSSSLFECSSIAL-VVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVM 317
Cdd:PRK08667 233 PAsPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWWgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILM 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 318 vcGISGYSV----------------GLFHLFNHAFFKALLFLSAGSIIHAVSDeQDMRKMGALIKTIPFTYIMILIGSLS 381
Cdd:PRK08667 312 --GIGLYVIfgvygldtlallalggALFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVS 388
|
410 420
....*....|....*....|....
gi 164421187 382 LMGFPYLTGFYSKDLILELSFEKY 405
Cdd:PRK08667 389 IAALPPFNGFASELLLYESFFQSF 412
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
3-471 |
6.30e-30 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 123.30 E-value: 6.30e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 3 ILILFLPLLSAIVSGLFGRKIGTKGAGIFTSNCIIISFLLSCYMY-YEIILNFSPAYIrlwrwfdselfttyfglqFDNL 81
Cdd:COG1007 10 EIILLLGALVLLLLDLFLPRRSRRLLAGLALLGLLLALALLLLALgGGTGTAFGGMFV------------------VDGF 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 82 TATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFL-MIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIKA 160
Cdd:COG1007 72 ALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRS 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 161 NKAAIKAMLinrvgdLGLVIALIM------IFKEFGTLDFSIISSSLITfEINNNSLTIICLLLFIGAIG-KSAQLGLHT 233
Cdd:COG1007 152 SEAALKYFL------LGALSSGFLlygislLYGATGSLNLAGIAAALAA-GGANSPLLLLGLVLVLAGLAfKLSAVPFHM 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 234 WLPDAMEG-PTPVSALIHAATMVtAGVFLIIR--SSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCS 310
Cdd:COG1007 225 WTPDVYEGaPTPVTAFLATAPKI-AAFAALLRllVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIA 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 311 QLGYM---VMVCGISGYSVGLFHLFNHAFFKALLFLSAGSIIHAVSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPY 387
Cdd:COG1007 304 HAGYLllgLAAGTPLGVSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPP 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 388 LTGFYSKDLILELSFEKYYIILAFWLASSAAfLTAFYSIRLIYFTFIinSNAPKEVFLKIHESSKIILFPLALLA-FGGI 466
Cdd:COG1007 384 TAGFFGKFYVFSAAVEAGLYWLAVIAVLNSV-ISAYYYLRVVKAMYF--DEPEEEAPISAPPGLRVALVIAALLVlLLGI 460
|
....*
gi 164421187 467 FLGYL 471
Cdd:COG1007 461 FPGPL 465
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
4-463 |
7.02e-30 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 123.34 E-value: 7.02e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 4 LILFLPLLSAIVSGLFGRkIGTKGAGIFTSNCIIISFLLSCYMYYEIILNFSPAYIRLWRWFDSELFTTYFGlqfdNLTA 83
Cdd:PRK08377 7 LLIALPLISAFFVPVIKG-IGKSAVRYYLILITLLQTGIAGWVFMEVYTTGKPIIIMAGGWKPPVGINLYIG----PFAA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 84 TMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYlQLFIGWEGVGLCSYLLINFWLTRiKANKA 163
Cdd:PRK08377 82 LFVLIIAIVSFIMSIFSLKAVEVEPIDKYAMLFLLLMLGATGMIATGDIF-NLFVFMEITAITAYALTAYNKTG-EAAEA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 164 AIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITfeINNNSLTIICLLLFIGAIGKSAQLGLHTWLPDAMEG-P 242
Cdd:PRK08377 160 SMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGT--IDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAaP 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 243 TPVSALIhAATMVTAGVFLIIRSSSLFECS---SIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVC 319
Cdd:PRK08377 238 HPITVMF-SAFVVKAGLYAMARILYLMQNAngwSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALAL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 320 GI---SGYSVGLFHLFNHAFFKALLFLSAGSIIHAVSDEQdMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDL 396
Cdd:PRK08377 317 ALgtqAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFR 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 164421187 397 ILELSFEK-YYIILAFWLASSaaFLTAFYSIRLIYFTFIINSNApkevflKIHESSKIILFPLALLAF 463
Cdd:PRK08377 396 IILAGLSAgYTWPVALVLGAS--VVEAVYYFRLIHTMWFKGEGE------RIRENAAIGIILLLLAAL 455
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-469 |
4.25e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 118.13 E-value: 4.25e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 1 MYILILFLPLLSAIVSGLFGRKIGTKGagIFTSNCIIISFLLSCYMYYEIILNfSPAYIRLWRWfdselfTTYFGLQF-D 79
Cdd:PRK07691 5 LVILPILIPVITAILLIFLGKRPIIQR--YVALIGSLLTLVAAIILVANVYKH-GIQTLELGNW------KAPFGIVFvA 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 80 NLTATMLIIITSISALVHI-YSIGYMagdpHIPRFMAYLSLFTFLMIVLV----TSDNYLQLFIGWEGVGLCSYLLINFW 154
Cdd:PRK07691 76 DMFAALLVLTSSIITFLVIlYSFQTI----GIERERYYYYPSVLFMLAGVngafLTGDIFNLFVFFEVMLMASYVLIVIG 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 155 LTRIKAnKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITFEINNNSLTIICLLLFIGAIG-KSAQLGLHT 233
Cdd:PRK07691 152 GTKIQL-RESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGLITVVAILFLFVFAtKAGLFPLYF 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 234 WLPDAMEGP-TPVSALIhAATMVTAGVFLIIRSSSLFECSSIALV--VVTIIGALTAFFAATVGVVQNDLKKVIAYSTCS 310
Cdd:PRK07691 231 WLPGSYYAPpIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSFThyLILILALLTIIFGVIGAVAYFDIKKIIIYNIMI 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 311 QLGYMVMVCGI---SGYSVGLFHLFNHAFFKALLFLSAGSIIHaVSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPY 387
Cdd:PRK07691 310 AVGVILVGVAMmteSGMIGAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPP 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 388 LTGFYSKDLILELSFEK-YYIILAFWLASSaaFLTAFYSIRLIYFTFIinsNAPKEVFLKIHESSKIILFPLALLAFGGI 466
Cdd:PRK07691 389 LSGFYGKFFIVEGTFEAgFYVSGIIVLLSS--LLVLYSVIKIFLKGFW---GEPKGYDLNNKVPVKKLLLPAVVLVAITI 463
|
...
gi 164421187 467 FLG 469
Cdd:PRK07691 464 LYG 466
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
4-471 |
4.90e-28 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 117.61 E-value: 4.90e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 4 LILFLPLLSAIVSGLFGRKIGTKGAGIFTSNCIIISFLLSCYMYYEIILNFSPAYIrlwrwfdselfttyfglqFDNLTA 83
Cdd:PRK05777 15 LILLGAAVVLLLIDAFVRRHSRRATLAVLALLLALVALLFVLGAAGGGTAFGGMLV------------------VDGFAL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 84 TMLIIITSISALVHIYSIGYMAgDPHIPRFmAYLSLFTFL-MIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIKANK 162
Cdd:PRK05777 77 FLKGLILLASLLALLLARPYLE-DRGRGEF-YLLVLFALLgMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLE 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 163 AAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITFEINNNSLTIICLLLFIGAIGKSAQLGLHTWLPDAMEG- 241
Cdd:PRK05777 155 AAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALADGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGa 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 242 PTPVSALIHAATMVTA-GVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYM---VM 317
Cdd:PRK05777 235 PTPVTAFLATAPKIAAfAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlvgLA 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 318 VCGISGYSVGLFHLFNHAFFKALLFlsagSIIHAVSDEQ----DMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYS 393
Cdd:PRK05777 315 AGTAEGYSAVLFYLLAYLFMTLGAF----GVISLLRRKGgeaeSISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWG 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 394 KDLILELSFEKYYIilafWLASSAAFLT---AFYSIRLIYFTFIINSNAPKEVFLKIHESSKIILFPLALLAFGGIFLGY 470
Cdd:PRK05777 391 KFYVFEAAVEAGLW----WLAVIGVLNSaigAFYYLRVIKLMYFDEPPRDAPVNWPLSAGGAVLSVSALLVLVLGIFPQP 466
|
.
gi 164421187 471 L 471
Cdd:PRK05777 467 L 467
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
3-469 |
1.28e-27 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 116.57 E-value: 1.28e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 3 ILILFLPLLSAIVsgLFGRKIGTKGAGIFTSNcIIISFLLSCYMYYEIIlnfspayirlwrwfdSELFTTYFGLQF--DN 80
Cdd:PRK06458 8 ALLLLIPLLASLL--LFALRKRRLVATLNVLG-ITLTLILALWLVFTVP---------------DAGEIFAAGLWFfiDD 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 81 LTATMLIIITSISALVHIYSIGYMAGD--------PHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLIN 152
Cdd:PRK06458 70 LNVFFLALIGVVGFLTSLYSIGYMRHEvehgelspVTLRLYYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLSSALLVG 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 153 FWLTRiKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTL----DFSIISSSLITF--EINNNSLTIICLLLFIGAIGKS 226
Cdd:PRK06458 150 IYRTR-ASLEAAWKYIIICSVGVAFALFGTILVYANAATVmgdgEMAILWTELLKHasLLDPTLMKLAFVFLLIGFGTKV 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 227 AQLGLHTWLPDA-MEGPTPVSALIHAATMVTAgVFLIIRSSSLFECSSIALVVVT---IIGALTAFFAATVGVVQNDLKK 302
Cdd:PRK06458 229 GLFPMHAWLPDAhSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDAAIGSDFPGRlllIFGLLSVLVAAFFLLRQRDIKR 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 303 VIAYSTCSQLGYMVMVCGISG---YSVGLFHLFNHAFFKALLFLSAGSIIHaVSDEQDMRKMGALIKTIPFTYIMILIGS 379
Cdd:PRK06458 308 LFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQ-KYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 380 LSLMGFPYLTGFYSKDLILELSFEKYYIILAFWLAssAAFLTAFYSIRLIYFTFIINSNAPKevfLKIHESSKIILFPLA 459
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLARGPLLIAILLL--LLLTLAFAALVRRVAGMVFGEPPEA---VNRGDLGWLTTSPMF 461
|
490
....*....|
gi 164421187 460 LLAFGGIFLG 469
Cdd:PRK06458 462 VHLVLVLVLG 471
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-496 |
8.22e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 110.81 E-value: 8.22e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 119 LFTFLMIVL------VTSDNYLQLFIGWEGVGLCSYLLINFWLTRiKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTL 192
Cdd:PRK07234 96 FYAQLLILHgsvnaaFVCADLISLYVALEVLSIATFLLVAYPRTD-RAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTF 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 193 DFSIISSSlitfeinnNSLTIIclLLFIGAIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECS 272
Cdd:PRK07234 175 AFSGLATA--------DPEAFA--LIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGL 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 273 SialVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVmvcgISGYSVGLFHLfNHAFFKALLFLSAGsIIHAV 352
Cdd:PRK07234 245 D---LIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFIL----AAPLVGGLYAL-AHGLVKSTLFLCAG-ALPSR 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 353 SDEQDMRKMgaliktIPF-TYIMILIGSLSLMGFPYLTGFYSKDLILelsfeKYYIILAFWLASSAAFLTAFYSIRLIYF 431
Cdd:PRK07234 316 NFTELISQM------LGIgKWIPLTMASFSIAGFPLLAGFVSKVLTL-----KNLLPWQAIALNLAAVGTAASFWKFIFL 384
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 164421187 432 TFiinsnAPKEVFLKIHESskiiLFPLALLAFGGIFL--GYLGKEYFLSNIITPIMPNSIKLVPLFF 496
Cdd:PRK07234 385 PF-----SADDEDKKPLPG----FWNAIALLLGGLFLanGVYTEAYTLGNILKALLTIGLGWLPYFL 442
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
4-469 |
5.58e-24 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 105.67 E-value: 5.58e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 4 LILFLPLLSAIVSGLFGRKIGT--KGAGIFTSnciIISFLLSCYMYyeiiLNFSPAY-----IRLWRWFDSelFTTYFGL 76
Cdd:PRK05846 8 LLIFLPLIGGLLVLLTERFGARlaRWIALIGT---LLTLLLSLVLW----IGFDSSNagfqfVEKHPWIPR--FGISYHL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 77 QFDNLTATMLIIITSISALVHIYSIGymAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFW-- 154
Cdd:PRK05846 79 GVDGISLLLVVLTALLTPLAVLASWE--EIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWgg 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 155 LTRIKAnkaAIKAMLINRVGDLGLVIALIMIF----KEFGTLDFSiissSLITFEINNNSLTIICLLLFIGAIGKSAQLG 230
Cdd:PRK05846 157 KNRIYA---ATKFFLYTLLGSLLMLVAIIYLVvvyyNATGTFDIA----DLLNLPLPPGVQYWLFLAFFIAFAVKMPMFP 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 231 LHTWLPDAM-EGPTPVSaLIHAATMVTAGVFLIIR-SSSLF-ECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYS 307
Cdd:PRK05846 230 LHTWLPDAHvQAPTAGS-VLLAGILLKMGAYGLLRfSLPLFpDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYS 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 308 TCSQLGYMVMVCGIS---GYSVGLFHLFNHAFFKALLFLSAGSIIHAVSDEqDMRKMGALIKTIPFTYIMILIGSLSLMG 384
Cdd:PRK05846 309 SISHMGFVTLGIFAGnqlGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTR-DIADYGGLAKVMPVLAAFFLFFAMASLG 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 385 FPYLTGFYSKDLILeLSFEKYYIILAFwLASSAAFLTAFYSIRLIYFTFIINSNAPKEVFLKIHESSKIILFPLALLAfg 464
Cdd:PRK05846 388 LPGTSGFVGEFLIL-LGSFQVNPVIAF-IATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVALL-- 463
|
....*
gi 164421187 465 gIFLG 469
Cdd:PRK05846 464 -LLLG 467
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
4-464 |
3.88e-23 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 103.10 E-value: 3.88e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 4 LILFLPLLSAIVSGLFGRKIGTKG---AGIFTsnciIISFLLSCYMYYEI-ILNFSPAYIRLWRWFDseLFTTYFGLQFD 79
Cdd:TIGR01972 3 LLIFLPLIGALLILLLPSNKDGKArwiALVVA----LATLLLSLLLLFQFdPTGSGFQFTEDIPWIP--ALGISYHLGVD 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 80 NLtATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLqLFIGWEGVGLCSYLLINFWlTRIK 159
Cdd:TIGR01972 77 GI-SLLLVLLTALLTLLAILASWESIQKRVKEFYALLLLLEAGVIGVFLALDLFL-FYVFWEAMLIPMYLLIGVW-GGPN 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 160 ANKAAIKAMLINRVGDLGLVIALI-MIFKEFGTLDFSIisssLITFEINNNSLTIICLLLFIGAIGKSAQLGLHTWLPDA 238
Cdd:TIGR01972 154 RIYAAMKFFLYTLAGSLLMLLAILgLYFLGGGTFDLLE----LLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDA 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 239 M-EGPTPVSALIHAATMVTAGVFLIIRSSSLF-ECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMV 316
Cdd:TIGR01972 230 HvEAPTAGSVILAGVLLKMGTYGFLRFNLPLFpDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVL 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 317 MvcGI-----SGYSVGLFHLFNHAFFKALLFLSAGsIIHAVSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGF 391
Cdd:TIGR01972 310 L--GIfsfneLGISGAVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGF 386
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 164421187 392 YSKDLILELSFEKYYIILAfwLASSAAFLTAFYSIRLIYFTFIIN-SNAPKEVFLKIHESSKIILFPLALLAFG 464
Cdd:TIGR01972 387 VGEFLILLGSFKVNPVVAF--LAALGIVLAAAYMLTLYKRVFFGElSNPEVAEFPDLNGREIAVLAPLVVLILF 458
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
35-460 |
2.19e-22 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 101.11 E-value: 2.19e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 35 CIIISFLLSCYMYYEIILNFSPAYIRLWrwfdselfttYFGLQFDNLTATMLIIITSISALVHIYSIGYMAGDPHIPRFM 114
Cdd:MTH00063 10 CLLIFFLFLVGVSSSVSLNFLSFGGYSW----------LINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLN 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 115 AYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIKAnKAAIKAMLINRVGDLGLVIaLIMIFKEFGTLDF 194
Cdd:MTH00063 80 KLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSL-RASVVTLVSSRFGDVCLFL-LIGLSCWGGSGSF 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 195 siissslitfeinnnsltIICLLLFIGAIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSi 274
Cdd:MTH00063 158 ------------------LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSW- 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 275 ALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISGYSVGLFHLFNHAFFKALLFLSAGSIIHAVSD 354
Cdd:MTH00063 219 LSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGG 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 355 EQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILELSFEKYYIILAFWLASSAAFLTAFYSIRLIYFTFI 434
Cdd:MTH00063 299 SQSSNCVYSSILYGSWNLFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCLILFG 378
|
410 420
....*....|....*....|....*.
gi 164421187 435 INSNAPKEVFLKIHESSKIILFPLAL 460
Cdd:MTH00063 379 VKSSLSSGVRFLFFNSGLMVFLWLFI 404
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
78-352 |
7.55e-22 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 99.34 E-value: 7.55e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 78 FDNLTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTR 157
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGLNKGW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 158 IKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITFEINNNSLTIICLLLFIGAIGKSAQLGLHTWLPD 237
Cdd:PRK08601 150 KVAREAAKISGMLFLISWLALALAIVWLFIATGEWQLTSVLSNENLAQLGTWEKTGINLLLILAVMIPAAQWPFQRWLIE 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 238 AMEGPTPVSALIHAAtMVTAGVFLIIRSSSLFEcSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVM 317
Cdd:PRK08601 230 SAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFH-DDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLV 307
|
250 260 270
....*....|....*....|....*....|....*
gi 164421187 318 VCGISGYSVGLFHLFNHAFFKALLFLSAGSIIHAV 352
Cdd:PRK08601 308 QCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRF 342
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
116-469 |
3.13e-21 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 96.94 E-value: 3.13e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 116 YLSLFTFL-MIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDF 194
Cdd:TIGR01770 106 ILLLFALLgIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNF 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 195 SIISSSLITFEINNNSLTIICLLLFIGAIGKSAQLGLHTWLPDAMEG-PTPVSALIHAATMVTA-GVFLIIRSSSLFECS 272
Cdd:TIGR01770 186 EDLLLFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFS 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 273 SIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYmVMVCGISGYSVGLFHLFNHAFFKALLFLSAGSIIHAV 352
Cdd:TIGR01770 266 EAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGY-ILIGLLAGTLEGIKAVLFYIFIYALMSLGAFGVLSLL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 353 SDEQD-----MRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILELSFEKYYIILAFWLASSAAfLTAFYSIR 427
Cdd:TIGR01770 345 RSYKDewieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSV-IGAFYYLR 423
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 164421187 428 LIYFTFIINsnapKEVFLKIHESSKIILFPLALLAFGGIFLG 469
Cdd:TIGR01770 424 VVKVMYFDK----PERRIPSNPQSKAQSLLLSISALFILFLG 461
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
74-477 |
9.38e-20 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 92.71 E-value: 9.38e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 74 FGLQF--DNLTATMLIIITSISALVHIYSIGYMAgdpHIPRFMAYLSLFTFLMI----VLVTSDNYlQLFIGWEGVGLCS 147
Cdd:PRK12663 69 FGIQFtgDSLSALMVTTASFVATAIMAYGFGDIE---HSGRRYGFPPFILLLMAgvigSFLTGDLF-NLYVWFEVMLIAS 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 148 YLLINFWLTRIKAnKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLItfEINNNSLTIICLLLFIGAIGKSA 227
Cdd:PRK12663 145 FVLITLGQEREQL-RGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLN--DMGDTATLTTIALLFLLAFGMKA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 228 QLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSS-LFECSSIAL-VVVTIIGALTAFFAATVGVVQNDLKKVIA 305
Cdd:PRK12663 222 ALFPFMWLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTlLFPQERELLhPLLATMAAITMVIGALGALAYKDIRRIAG 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 306 YSTCSQLGYMVM---VCGISGYSVGLFHLFNHAFFKALLFLSAGSIIhAVSDEQDMRKMGALIKTIPFTYIMILIGSLSL 382
Cdd:PRK12663 302 YQVISSIGFILLglaLGTPAGINGAIFYLVHDMVVKTALFLIAGSLV-RLTGYRSLQYLGGLYRKEPLFGALFLILIFAI 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 383 MGFPYLTGFYSKDLILELSFEK-YYIILAFWLASSaaFLTAFYSIRLIYFTFIINSNAPKEVFLKIHESSKIilfPLALL 461
Cdd:PRK12663 381 GGLPPFSGFWGKVLLVQGALDNgAYILLALMLITS--LITMYSLFRIFFLAYWGDKDGEEVNFKPIPLYRKL---PLSIL 455
|
410
....*....|....*.
gi 164421187 462 AFGGIFLGyLGKEYFL 477
Cdd:PRK12663 456 AVVVIAMG-IAAEPLL 470
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
79-399 |
5.68e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 90.41 E-value: 5.68e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 79 DNLTATMLIIITSISALVHIYSIGY-MA-GDPHIPrfmayLSLF--TFLMIVLVTSDNYL-----QLFIGWEGVGLCSYL 149
Cdd:PRK12665 75 DRLSALMLVVSSVVLLAVLVYAIGQgIRdGDEEQP-----VSIFlpTYLILVAGVSNAFLagdlfNLYVGFEILLVASYV 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 150 LINFWLT--RIKAnkaAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLItfEINNNSLTIICLLLFIGAIGKSA 227
Cdd:PRK12665 150 LLTLGATaaRVRA---GVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLD--ELPSGTRTALFAVLLVAFGIKAA 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 228 QLGLHTWLPDAM-EGPTPVSAlIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAY 306
Cdd:PRK12665 225 VFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSF 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 307 STCSQLGYMVMVCGIS---GYSVGLFHLFNHAFFKALLFLSAGsIIHAVSDEQDMRKMGALIKTIPFTYIMILIGSLSLM 383
Cdd:PRK12665 304 TLVSHIGYMVFGIALStvaGLSGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLG 382
|
330
....*....|....*.
gi 164421187 384 GFPYLTGFYSKDLILE 399
Cdd:PRK12665 383 GIPPFSGFIGKVALLE 398
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
170-421 |
1.75e-18 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 89.12 E-value: 1.75e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 170 INRVGDLGLVIALIMIFKEFGTLDFSIISSSLITFEINNnsltIICLLLFIGAIGKSAQLGLHTWLPDAMEGPTPVSALI 249
Cdd:PRK08042 142 LGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGS----DIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAAL 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 250 HAATMVTAGVFLIIRSSSLFECSSIAL-VVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVM-----VCGIS- 322
Cdd:PRK08042 218 FSTVVMKIGLLGILTLSLLGGNAPLWWgVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLglgagVTGIAl 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 323 --------GYSVGLFHLFNHAFFKALLFLSAGSIIHAvSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSK 394
Cdd:PRK08042 298 eqpalialGLVGGLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGE 376
|
250 260
....*....|....*....|....*..
gi 164421187 395 DLILElSFekyyiilaFWLASSAAFLT 421
Cdd:PRK08042 377 WVIYQ-SF--------FKLSNSGAFVA 394
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
1-469 |
3.19e-18 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 87.85 E-value: 3.19e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 1 MYILILFLPLLSAIVSGLFGRKIGTKGAGIFTSNCIIISFLLSCYMYYEIILNFSPAYIRLWRWFDSELFTTYfGLQFDN 80
Cdd:PRK07363 1 MLSVLLWLPILGAIIIGFFPGNLPSARLRQITLVFAVLVLAWSLFLLTQFDLSDPGMQFQEYLPWNEPLGLSY-SLGVDG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 81 LTaTMLIIITSISALVHIYSIGYMAGDPHIprFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRiKA 160
Cdd:PRK07363 80 LS-LPLLVLNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGE-KR 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 161 NKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITFEINNNSLTIICLLLFIGAigKSAQLGLHTWLPDAME 240
Cdd:PRK07363 156 GYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILLTGLLLGFGI--KIPLVPLHTWLPDAYT 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 241 GPTPVSALIHAATMVTAGVFLIIRSS-SLF-ECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYmVMV 318
Cdd:PRK07363 234 EASPAVAILLGGVLAKLGTYGLLRFGlQLFpQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGY-ILV 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 319 CGISGYSVGLF----HLFNHAFFKALLFLSAGsIIHAVSDEQDMRKMGAL---IKTIPFTYIMILIGSLSLMGFPYLTGF 391
Cdd:PRK07363 313 AAAAGTQLSLLgavaQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLmnpIRGLPLTSALLVLAGMASAGIPGLVGF 391
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 164421187 392 YSKDLILELSFEKYYIILAFWLASSAafLTAFYSIRLIYFTFIINSNAPKEVFLKIHESSKIILFPLALLAfggIFLG 469
Cdd:PRK07363 392 VAEFIVFQGSFSTFPIPTLLCIVASG--LTAVYFVILLNRTCFGRLDNKLAYYPKVLWSEKIPALILTALI---LFLG 464
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
424-608 |
3.96e-17 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 79.52 E-value: 3.96e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 424 YSIRLIYFTFIINSNAPkeVFLKIHESSKIILFPLALLAFGGIFLGYLGKEYFLSNIITPIMPNSIKLVPLFFSLSGAGL 503
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFS--SLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 504 AYFLLcyqiNTLDNKVFKKTYHVIYTFLNSAWQFNYVINHLIIKQIWKMGHVItYKLIDRGILEVIGPKGLSVVFVKLTQ 583
Cdd:pfam06455 79 GLELS----NLSNKQLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKL-AKQIDQGWSEKFGPQGIAKTLMTLSK 153
|
170 180
....*....|....*....|....*
gi 164421187 584 IISKLQSGLLFNYVLVIIIFTTFFI 608
Cdd:pfam06455 154 IIQNSQKGLIKIYLLSFLLWLLLLL 178
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
79-421 |
9.49e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 80.18 E-value: 9.49e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 79 DNLTATMLIIITSISALVHIYSIGYM-----AGDPHIPRFMAYLSLFTFLMIVLVT---SDNYLQLFIGWEGVGLCSYLL 150
Cdd:PRK08676 62 DHLGIFVVLIASVVFILAALYARGYVdhllsNGELDPENLKVFYLGFNLLLSVITFaffSDNLALFWIFAELTTVFSAML 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 151 INFWLTRIKANkAAIKAMLINRVGDLGLVIALIMIFK------EFGTLDFSIISSslITFEINNNSLTIICLLLFIGAIG 224
Cdd:PRK08676 142 IAILSARENID-AALKYIFIASTAMIFAFIGLIFLFSltrqalGTGTLNWTELAA--HASLLSPSVLGASFLFIFIGFLA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 225 KSAQLGLHTWLPDA-MEGPTPVSALIhAATMVTAGVFLIIRSSSLFECSSIALVVVTII---GALTAFFAATVGVVQNDL 300
Cdd:PRK08676 219 KSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAEQFSNVLiglGIFSIAVAAFSMLSQRNL 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 301 KKVIAYSTCSQLGYMVMVCGIS---GYSVGLFHLFNHAFFKALLFLSAGsIIHAVSDEQDMRKMGALIKTIPFTYIMILI 377
Cdd:PRK08676 298 KKLIAFSSIEHMGLMLLGIGIGtplALFWMLFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQPVAAWGVIL 376
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 164421187 378 GSLSLMGFPYLTGFYSKDLIL----ELSFEKYYIILAFWLASSAAFLT 421
Cdd:PRK08676 377 GSAAIIGMPPFPLFLSKFFILlqlgGISVWLVLAVLLLLLLAASSFAI 424
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
4-469 |
1.47e-15 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 79.69 E-value: 1.47e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 4 LILFLPLLSAIVSGLF-GRKIGTKGAGIFTSNCIIISFLLSCYMYYeiilnFSPAYIRLwrwfdsELFTTYFGLQFDNLT 82
Cdd:PRK06277 6 LMVVFPMICAIIFNLLhGKDKLIKYLTFIVAILLPILPFLASYGYY-----YFGGHGLV------NGYHSGITYLFNPAK 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 83 ATMLIIITSISALVHIYSIGymagDPHIPRFMAYLSLFTFL-MIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRiKAN 161
Cdd:PRK06277 75 QIIIFVLSLIASLVLITGLG----EKKSSGLYVFLMLMGLAsVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGTE-EAY 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 162 KAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITfEINNNSLTIICLLLFIGAIGKSAQLGLHTWLPDAMEG 241
Cdd:PRK06277 150 KAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNALLV-NPTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSDIYAK 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 242 PTP-VSALIHAATMVT--AGVFLIIRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMV 318
Cdd:PRK06277 229 AKPfGSALLQTFSKFVlvALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 319 CGIS---GYSVGLFHLFNHAFFKALLFLSAGsIIHAVSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKD 395
Cdd:PRK06277 309 LALGtplGIVAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKL 387
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 164421187 396 LILELSFEKYY-----IILAFWLASSAAFLTAFYSIRLiyftfiinSNAPKEVFLKIHESSKIILFPLALLAFGGIFLG 469
Cdd:PRK06277 388 MLAQAAMQANMpelaiIMIIVSIGTFVSMMKAFYLIYL--------KPKPEELEYKNKKVPKYAVFSLAVLTILCIILG 458
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
119-393 |
1.96e-15 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 79.31 E-value: 1.96e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 119 LFTFLMIVLVT-------SDNYLQLFIGWEGVGLCSYLLINFWLTRiKANKAAIKAMLINRVGDLG-LVIALIMIFKEfG 190
Cdd:PRK12561 88 LFYFLMLVLYSaqigvflAQDLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASIFiLVAGLALALSG-D 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 191 TLDFSIISSSLITFEInnnSLTIICLLLFIGAIG-KSAQLGLHTWLPDAM-EGPTPVSalihaatMVTAGVFL------I 262
Cdd:PRK12561 166 TFTFDLAELGAKSYPL---ALELLLYAGFLIAFGvKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggyaL 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 263 IR--------SSSLFECSSIALVVVTII-GALTAFfaatvgvVQNDLKKVIAYSTCSQLGYMVMvcGIS-----GYSVGL 328
Cdd:PRK12561 236 IRfnvqmlpdAHVYFAPALAILGVVNIIyGALNAF-------AQDNVKRRLAYSSVSHMGFVLL--GIAaftdlGISGAM 306
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 164421187 329 FHLFNHAFFKALLFLSAGSI---IHAVSdeqdMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYS 393
Cdd:PRK12561 307 LQMISHGLIAAALFFLTGVTyerTHTLS----IPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-469 |
4.52e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 78.24 E-value: 4.52e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 3 ILILFLPLLSAIVSGLFGRKigtKGAGIFTSNCIIISFLLSCYMYYEIilnfspayirlwrwFDSELFTTYFG------- 75
Cdd:PRK12662 7 ILQVIIPLLSAVVCALLKNR---KLVKIISCIVVAVSFFIALVLFVQV--------------YSGGVIKYSLGgwgppyg 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 76 --LQFDNLTATMLIIITSISALVHIYSI---GYMAGDPHIPRFMA-YLSLFTFLMIVLVTSDNYlQLFIGWEGVGLCSYL 149
Cdd:PRK12662 70 ieLRVDILSATMLVLVNFIAVMSVLYGIypnRKEISVNKIPSFYSaFLLCLGGLLGILVSNDVF-NIYVFLEISSISSYV 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 150 LINFWLTRiKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITFeINNNSLTIICLLLFIGAIGKSAQL 229
Cdd:PRK12662 149 LVAMGRDK-KALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDL-PTNRAIQIGVLFIMVGLFIKAALF 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 230 GLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIR------SSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKV 303
Cdd:PRK12662 227 PFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRivydvfKANFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRI 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 304 IAYSTCSQLGYMVMVCGISGYSvGLF----HLFNHAFFKALLFLSAGSIIHAVsDEQDMRKMGALIKTIPFTYIMILIGS 379
Cdd:PRK12662 307 FAYSSISHIGYIILAVSLNTYY-GLAaavaYIVNHSIVKSALFMVSGSISYHF-GTTKLEDCLNLWKSMPKITLAFVLLS 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 380 LSLMGFPYLTGFYSKDLILElSFEKYYIILAFWLASSAAFLTAFYSIRLIYFTFIINSNAPKEVFLKIHESSKIILFPLA 459
Cdd:PRK12662 385 LSLIGMPPTSGFVAKWYILD-AFIKSNAWIGLVVLLVGSGLSVIYVWKIVEALYFESRMVESKANDKAFKTPNAMVLCIW 463
|
490
....*....|
gi 164421187 460 LLAFGGIFLG 469
Cdd:PRK12662 464 IMAILSIIVG 473
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
64-114 |
1.17e-14 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 68.22 E-value: 1.17e-14
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 164421187 64 WFDSELFTTYFGLQFDNLTATMLIIITSISALVHIYSIGYMAGDPHIPRFM 114
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
67-408 |
1.31e-12 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 70.59 E-value: 1.31e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 67 SELFTTYFGLQFDNLTATMLIIITSISALVHIYSIGYmagdPHIPRFMAYLSLFTFL-MIVLVTSDNYLQLFIGWEGVGL 145
Cdd:PRK06459 31 SIILLITSIYEYNGVLSFFSIISTIVWILASLYSIEY----DHYGKWLSSLYILTILgMAIVLTSDNYLLFLAGWEIMTI 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 146 CSYLLInfWLTRiKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITFEINNNSLTIICLLLFIgaigk 225
Cdd:PRK06459 107 PSYVAI--ALTK-KNKRPAFVFMAFGELSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKMGMMPFL----- 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 226 saqlgLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALV--VVTIIGALTAFFAATVGVVQNDLKKV 303
Cdd:PRK06459 179 -----VSEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFglTILAIGAFSILFGALYAYVSENVKGL 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 304 IAYSTCSQLGYMVMVCG--ISGYSVG-----------LFHLFNHAFFKALLFLSAGSIIHAVSDEQDMRKMGaliktipF 370
Cdd:PRK06459 254 LAFSTIENNGAILVALGlyMVTKQLItsiehfslitvILYSFAHSVAKTGLFLSSGLQEKQSITYSKKIRNR-------W 326
|
330 340 350
....*....|....*....|....*....|....*...
gi 164421187 371 TYIMILIGSLSLMGFPYLTGFYSKDLILELSFEKYYII 408
Cdd:PRK06459 327 IELGLTLLASSLSGLLPNIGGVASWLLLESLFMFAYVL 364
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
1-429 |
3.27e-11 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 65.88 E-value: 3.27e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 1 MYILILFLPLLSAIVSGLFGRKIGTKGAGIFTSNCIIISFLLSCYMYYEI-ILNFSPAYIRLWRWFDSELFTTYFGLqfD 79
Cdd:PRK06473 1 MLSALIWIPLLGAILIGFWPSGINGKLARSVALVIASVLLLLSLVLAFQFdPGNPNQQFTEFIPWIDSLGLSYHLGV--D 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 80 NLTATmLIIITSISALVHIYSigymaGDPHIPRFMAYLSLFTFLMIVLV---TSDNYLQLFIGWEGVGLCSYLLINFWlT 156
Cdd:PRK06473 79 GLSLP-LLVLNSLLTLIAIYS-----SDESIQRPRFYYSLLLLLNAGVSgafLAQDLLLFFLFYELELIPLYLLIAIW-G 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 157 RIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITFEINNNSLTIICLLLFIGAigKSAQLGLHTWLP 236
Cdd:PRK06473 152 GQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLSTQLLLLAPILVGFGI--KIPLVPFHTWLP 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 237 DA-MEGPTPVSALIhAATMVTAGVFLIIR--SSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLG 313
Cdd:PRK06473 230 DAhVEASTPVSVLL-AGVLLKLGTYGLLRfgVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 314 YMVMVCGIS---GYSVGLFHLFNHAFFKALLFLSAGsIIHAVSDEQDMRKMGALI---KTIPFTYIMILIGSLSLMGFPY 387
Cdd:PRK06473 309 YILLAAAAAtplSILAAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGLLnpeRGLPITGSLMILGVMASAGIPG 387
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 164421187 388 LTGFYSKDLILELSFEKYYIILAFWLASSAafLTAFYSIRLI 429
Cdd:PRK06473 388 MVGFIAEFLVFRGSFPIFPVQTLLCMIGTG--LTAVYFLLLV 427
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
61-394 |
6.35e-11 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 65.03 E-value: 6.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 61 LWRWFDSELFTTYFGLQFDNLTATMLIIITSISALVHIYSIGYM-AGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIG 139
Cdd:CHL00049 60 LFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIeCTEMAITEFLLFVLTATLGGMFLCGANDLITIFVA 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 140 WEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDLGLVIALIMIFK-EFGTLDFSIISSSLITFEINNNSLTIICLLL 218
Cdd:CHL00049 140 LECLSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVYGFSWLYGlSGGEIELQEIVNGLINTQMYNSPGISIALIF 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 219 FIGAIG-KSAQLGLHTWLPDAMEG-PTPVSALIH-----AATMVTAGVFLIIRSSSLFECSSIalvvVTIIGALTAFFAA 291
Cdd:CHL00049 220 ITVGIGfKLSLAPFHQWTPDVYEGsPTPVVAFLSvtskvAASALATRIFDIPFYFSSNEWHLL----LEILAILSMILGN 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 292 TVGVVQNDLKKVIAYSTCSQLGYMV--MVCGIS--GYSVGLFHLFNHAFFKALLFlsAGSIIHAVSDEQD-MRKMGALIK 366
Cdd:CHL00049 296 LIAITQTSMKRMLAYSSIGQIGYVIigIIVGDSndGYASMITYMLFYIFMNLGTF--ACIVLFGLRTGTDnIRDYAGLYT 373
|
330 340
....*....|....*....|....*...
gi 164421187 367 TIPFTYIMILIGSLSLMGFPYLTGFYSK 394
Cdd:CHL00049 374 KDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
195-471 |
6.84e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 57.59 E-value: 6.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 195 SIISSSLITFEINNNSLTIICLLLfiGAIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSI 274
Cdd:MTH00144 69 LLIFGSLIMYNLSFSWFSMSLLLL--GLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 275 ALVvvtiIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCgISGYSVGLFHLFNHAFFKALLFLSAGSiihavSD 354
Cdd:MTH00144 147 LCV----ISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAI-LHGSWLMWMYFLIYIVSSGFLFFSLWS-----GD 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 355 EQDMRKMGALIKTIPFTYIMILIGsLSLMGFPYLTGFYSKDLILELSFEKYYIILAFWLASSaAFLTAFYSIRLIYFTFI 434
Cdd:MTH00144 217 SGSMKDLGSLKPSYKTGLSIISLL-LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLG-SLISLFFYLSVFFSSFL 294
|
250 260 270
....*....|....*....|....*....|....*..
gi 164421187 435 INSNapkevFLKIHESSKIILFPLALLAFGGIFLGYL 471
Cdd:MTH00144 295 SSSK-----SKKSNSSKVLNSSIISLNLLGGLLFLLL 326
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
194-430 |
2.02e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 56.47 E-value: 2.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 194 FSIISSSLITFE--INNNSLTIICLLLFIGAIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSlfec 271
Cdd:MTH00070 72 FSSTINAWFTGEwtIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISH---- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 272 sSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISGySVGLFHLFNHAFFKALLFLsagSIIHA 351
Cdd:MTH00070 148 -LLNSNLLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSP-HLTLLNLLIYLIMTSSMFL---MLMNL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 352 VSdeQDMRKMG-ALIKTIPFTYIMILIgSLSLMGFPYLTGFYSKDLILELSFEKYYIILAFWLASSaAFLTAFYSIRLIY 430
Cdd:MTH00070 223 NS--TNINKLSsSWSKNPTLTSMMMLT-LLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALS-ALLSLFFYLRLSY 298
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
89-469 |
7.82e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 55.31 E-value: 7.82e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 89 ITSISALVHIYSIGYMagdphIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAM 168
Cdd:MTH00226 114 IVPCSILISWHSVKYL-----TKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFF 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 169 LINRVGDLGLVIALIMIFKEFGTLDFSIISSSliTFEINNNSLTIICLLLFIGAIGKSAQLGLHTWLPDA-MEGPTPVSA 247
Cdd:MTH00226 189 FYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC--SHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAhVEAPVAGSV 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 248 LIHAATMVTAGVFLIIRSSSLFECS----SIALVVVTIIGALTAFFAAtvgVVQNDLKKVIAYSTCSQLGYM---VMVCG 320
Cdd:MTH00226 267 LLAGILLKLGGYGLVRLSWPILPLGaqnlAPAVIAMGIVGIVYGSFAT---CRQIDVKRLVAYSSVAHMGLVsitLVTHD 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 321 ISGYSVGLFHLFNHAFFKALLFLSAgSIIHAVSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILEL 400
Cdd:MTH00226 344 IIGLTGSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILS 422
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 164421187 401 SFEKYYIILAFwlASSAAFLTAFYSirlIYFTFIINSNAPKEVFLKIHESSKIILFPLALLAFGGIFLG 469
Cdd:MTH00226 423 SFNWNPIIGVF--VCSGVILSAVYS---FYFANRVTFGAPGNLITFARDVNRREFYITASMVFFAFLIG 486
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
119-393 |
8.33e-08 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 55.10 E-value: 8.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 119 LFTFLM-------IVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRiKANKAAIKAMLINRVGDLG-LVIALIMIFKEfG 190
Cdd:PRK02546 116 LFYFLMlamyggqIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFiLLAALAMAFYG-D 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 191 TLDFSIISSSLITFEINNNSLTIICLLLFIGAigKSAQLGLHTWLPDAM-EGPTPVSALIhAATMVTAGVFLIIR----- 264
Cdd:PRK02546 194 TPTFDMTALAAKDFGLGFQLLCYAGLLIAYGV--KLPIVPLHTWLPDAHgEATAPVHMLL-AGILLKMGGYALLRmnagm 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 265 ---SSSLFECSSIALVVVTII-GALTAFfaatvgvVQNDLKKVIAYSTCSQLGYMVMvcGIS-----GYSVGLFHLFNHA 335
Cdd:PRK02546 271 lpdAHAQFAPLLIVLGVVNIIyAALTSF-------AQRNLKRKIAYSSISHMGFVLI--GIGsftdlGTSGAMLQMISHG 341
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 164421187 336 FFKALLFLSAGSIIHAVSDEQdMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYS 393
Cdd:PRK02546 342 LIGASLFFLVGATYDRTHTLM-LDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVA 398
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
79-394 |
1.76e-07 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 53.90 E-value: 1.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 79 DNLTATMLIIITSISALVHIYSIGYM--AGDPhIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLT 156
Cdd:PRK02504 77 DNLSIAFRAIIALSTLVTLLMSWRYVeqSGTP-LGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTGYMKR 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 157 RIKANKAAIKAMLInrvgdlGLVIALIMIFK-------EFGTLDFSIISSSLITfeiNNNSLTIICLLLFIGAIG-KSAQ 228
Cdd:PRK02504 156 DPRSNEAALKYLLI------GAASSAIFLYGssllyglSGGSTQLSAIALALIT---SPSLGLALALVFVIAGIAfKISA 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 229 LGLHTWLPDAMEG-PTPVSALIHAATMvTAGVFLIIR--SSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIA 305
Cdd:PRK02504 227 VPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRllVTAFPSFDEQWKLLFTALAILSMVLGNVVALAQTSMKRMLA 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 306 YSTCSQLGYMV--MVCGI-SGYSVGLFHLFNHAF-----FKALLFLSagsiIHAVSDEqdMRKMGALIKTIPFTYIMILI 377
Cdd:PRK02504 306 YSSIGQAGFVMigLVAGTeAGYASMVFYLLAYLFmnlgaFACVILFS----LRTGTDQ--ISDYAGLYQKDPLLTLGLSL 379
|
330
....*....|....*..
gi 164421187 378 GSLSLMGFPYLTGFYSK 394
Cdd:PRK02504 380 CLLSLGGIPPLAGFFGK 396
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
74-316 |
2.82e-07 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 53.44 E-value: 2.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 74 FGLQFDNLTATMLIIITSISALVHIYSIGYMAGDPHIPR--FMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLI 151
Cdd:MTH00044 55 LSLATDSLSSPLIILSCWLAPLSLLASINHLSNNSPNNQrtFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILI 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 152 NFWLTRIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITFeINNNSLTIICLLLFIGAIGKSAQLGL 231
Cdd:MTH00044 135 TRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTS-LSSNSSSIWWIFCILAFLVKMPIYGF 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 232 HTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSI-----ALVVVTIIGALtafFAATVGVVQNDLKKVIAY 306
Cdd:MTH00044 214 HLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFSLPSAnnisfILIVFCCWGAL---ITSIICLRQTDLKALIAY 290
|
250
....*....|
gi 164421187 307 STCSQLGYMV 316
Cdd:MTH00044 291 SSVGHMSLVA 300
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
79-316 |
6.07e-07 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 52.05 E-value: 6.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 79 DNLTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRI 158
Cdd:MTH00014 58 DMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQP 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 159 KANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLdfsiissSLITFEINNNSLTIICLLLFIGAIG---KSAQLGLHTWL 235
Cdd:MTH00014 138 ERLQASFYLMIYTVTASLPLLMSILLIFYTNNSL-------SMLMSSMEPPSIYLMNLWWLITILAfmvKMPLYTVHLWL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 236 PDA-MEGPTPVSaLIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALT-AFFAATVGVVQNDLKKVIAYSTCSQLG 313
Cdd:MTH00014 211 PKAhVEAPVAGS-MILAGILLKLGGYGLLRMSSLFMHINKSLSAPFSSISLVgAVITSLICIRQPDLKSLIAYSSVGHMG 289
|
...
gi 164421187 314 YMV 316
Cdd:MTH00014 290 LMT 292
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
62-316 |
8.97e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 51.84 E-value: 8.97e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 62 WRWFDSELFT---TYFGLqfDNLTATMLIIITSISALVHIYSIGYMAGDPhIPRFMAYLSLFTFLMIVLV---TSDNYLQ 135
Cdd:MTH00068 41 WFNLPSETMNftnKYFGI--DQISSPLLILTCWLLPLMILASQNHLKNEP-INRQRTYISMLIILQLTLIlafSATELIL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 136 LFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSLITFEINNNSLT--I 213
Cdd:MTH00068 118 FYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIwwL 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 214 ICLLLFIGaigKSAQLGLHTWLPDAMegptpVSALIhAATMVTAGVFL------IIRSSSLFECSSIALVVVTIIGALTA 287
Cdd:MTH00068 198 ACLLAFMV---KMPLYGLHLWLPKAH-----VEAPI-AGSMILAAVLLklggygILRISILLTPLSKELSYPFIILALWG 268
|
250 260 270
....*....|....*....|....*....|
gi 164421187 288 FFA-ATVGVVQNDLKKVIAYSTCSQLGYMV 316
Cdd:MTH00068 269 VLMtSLICLRQTDLKSLIAYSSVSHMGLVI 298
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
124-468 |
1.43e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 50.80 E-value: 1.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 124 MIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSII------ 197
Cdd:MTH00196 6 ILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYInlvlns 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 198 SSSLITFEINNNSLTIICLLLFigaigKSAQLGLHTWLPDAMEG-PTPVSALIhaATMVTAGVFLIIRSSSL-FECSSIA 275
Cdd:MTH00196 86 GQSFSSVSVPIGYLLIIVALLF-----KLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFSILVSIGLnVNILLIG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 276 LVVVTIIGALTAFfaatvgvVQNDLKKVIAYSTCSQLGYMVM---VCGISGYSVGLFHLFNHAFFKALLFlsagSIIHAV 352
Cdd:MTH00196 159 GLFSLFVGAIGAL-------NQTKIKRLLAYSGIGHMGFVLWgieIGSFESIQASLVYLFIYIIMSICVF----SIILAL 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 353 SDEQDMR-KMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILeLSFEKYYIILAFWLASSAAFLTAFYSIRLIYF 431
Cdd:MTH00196 228 NVYKNLIiEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL-LSGVVYQYYLIFLLAVFCSVIAGVYYVRIVKI 306
|
330 340 350
....*....|....*....|....*....|....*..
gi 164421187 432 TFIINSNAPKeVFLKIHESSKIILFPLALLAFGGIFL 468
Cdd:MTH00196 307 LFFQANSFLL-ISTKILKKENKINLRKALLIGFSLYL 342
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
79-432 |
1.61e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 50.72 E-value: 1.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 79 DNLTATMLIIITSISALVHIYSIGYMAGDPhIPRFMAYLSLFTFLMIVLV---TSDNYLQLFIGWEGVGLCSYLLINFWL 155
Cdd:MTH00127 60 DPLSTPLLVLTCWLLPLMILASQNHTAPEP-INRQRMYITLLTSLQIFLIlafGATEIIMFYVMFEATLIPTLIIITRWG 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 156 TRIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSII--SSSLITFEINNNSLTIICLLLFIGaigKSAQLGLHT 233
Cdd:MTH00127 139 NQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLqySQPLQLSSWADKLWWAGCLLAFLV---KMPLYGVHL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 234 WLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALTAFF-AATVGVVQNDLKKVIAYSTCSQL 312
Cdd:MTH00127 216 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALWGIImTGSICLRQTDLKSLIAYSSVSHM 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 313 GYMVMVCGIS---GYSVGLFHLFNHAFFKALLFLSAGSiIHAVSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLT 389
Cdd:MTH00127 296 GLVAGGILIQtpwGFTGALILMIAHGLTSSALFCLANT-NYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLP 374
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 164421187 390 GFYSKDLILELSFEKYYIILAFWLASSAafLTAFYSIRLIYFT 432
Cdd:MTH00127 375 NLMGELMIITSLFNWSPWTLALTGLGTL--ITAGYSLYMFLMT 415
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
122-468 |
2.06e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 50.35 E-value: 2.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 122 FLMIVLVTSDNYLQLFIGWEgVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSSL 201
Cdd:MTH00200 15 LGTLLTFSSSHWFLIWLGLE-INTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISEMLGPL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 202 ITFeinnnsLTIICLLLFIGAIGksaqlgLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIalvvvTI 281
Cdd:MTH00200 94 SET------LILLALALKLGLAP------GHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNIL-----LL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 282 IGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISGysvglfHLFNHAFFKALLFLSAGSIIHAVSDEQDMRKM 361
Cdd:MTH00200 157 LGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSP------NLALLYLLLYVIITLTVFLLLNLLNSTKINSL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 362 GALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILELSFEKYYIILAFWLAsSAAFLTAFYSIRLIYFTFIINSNAPK 441
Cdd:MTH00200 231 SSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILL-LGSLLSLFFYLRLSYLTLLTLSPNQI 309
|
330 340
....*....|....*....|....*..
gi 164421187 442 EVFLKIHESSKIILFPLALLAFGGIFL 468
Cdd:MTH00200 310 NMMSSWRTKSNSNLLVGLLLLLSILGL 336
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
87-428 |
2.95e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 50.06 E-value: 2.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 87 IIITSISALVHIYSIGYMagdphIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIKANKAAIK 166
Cdd:MTH00204 93 TLLIPICILISWKSIKFL-----FKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYY 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 167 AMLINRVGDLGLVIALIMIFKEFGTLDFSIisssLITFEINNNSLTIICLLLFIGAIGKSAQLGLHTWLPDA-MEGPTPV 245
Cdd:MTH00204 168 FFFYTFAGSVFMLLGIFQLYSITGTTDYQI----LLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAhVEAPVAG 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 246 SALIHAATMVTAGVFLIIRSSSLFECSSIALV-VVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYM---VMVCGI 321
Cdd:MTH00204 244 SVILAGILLKLGGYGFLRFSWPLFPAASEYFApLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVplgLFTHTI 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 322 SGYSVGLFHLFNHAFFKALLFLsAGSIIHAVSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILELS 401
Cdd:MTH00204 324 EGLVAAVFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAA 402
|
330 340
....*....|....*....|....*..
gi 164421187 402 FEKYYIILAfwLASSAAFLTAFYSIRL 428
Cdd:MTH00204 403 FEYSLGLGV--LVTSGMVWSAAYSLYL 427
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
119-397 |
2.98e-06 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 49.94 E-value: 2.98e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 119 LFTFLM-------IVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRiKANKAAIKAMLINRVGDLGLVI-ALIMIFKEFG 190
Cdd:CHL00011 113 LFYFLMlamysgqIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIgVLGMGLYGSN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 191 --TLDFSIIS--SSLITFEInnnsltIICLLLFIGAIGKSAQLGLHTWLPDamegpTPVSAliHAAT-MVTAGVFLI--- 262
Cdd:CHL00011 192 epTLNFETLAnqSYPVALEI------LFYIGFLIAYAVKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKmga 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 263 -----IRSSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMvcGIS-----GYSVGLFHLF 332
Cdd:CHL00011 259 yglirINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIII--GIGsitdtGLNGAILQII 336
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 164421187 333 NHAFFKALLFLSAGSI---IHAVSDEQdmrkMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLI 397
Cdd:CHL00011 337 SHGFIGAALFFLAGTSydrIRLVYLDE----MGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIV 400
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
164-328 |
1.45e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 47.91 E-value: 1.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 164 AIKAMLINRVG-DLGLVIALIMIFKEFGTlDFSIISSSLITFEINNNSLTIICLLLFIGaigKSAQLGLHTWLPDA-MEG 241
Cdd:MTH00150 107 AGMYMMLYTVGaSLPLLLVILWMSSSYGS-SFMLLISSLRKLLSSMGLWGLLVFLAFLV---KLPMYPFHLWLPKAhVEA 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 242 PTpvsalihAATMVTAGVFL------IIRSSSLFE-CSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGY 314
Cdd:MTH00150 183 PV-------AGSMILAGILLklggygILRMMMVFSlSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSL 255
|
170
....*....|....
gi 164421187 315 MVMVCgISGYSVGL 328
Cdd:MTH00150 256 VLAGV-LSNTSWGW 268
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
108-456 |
1.91e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 47.08 E-value: 1.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 108 PHIPRFMAYLSLFTflmIVLVTSDNYLQLFIGWEgVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDLGLVIALIMIFK 187
Cdd:MTH00011 6 PTMFLFSSTMTLGT---LMALSSNNWLFLWMGME-LNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 188 EFGTLdfSIISSSLITFEInnnsltiiclllfigaIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIrsss 267
Cdd:MTH00011 82 FPSLL--KNITALMLLVSL----------------MLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILF---- 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 268 lFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMvcgISGYSVGLFHLFnhaFFKALLFLSAGS 347
Cdd:MTH00011 140 -FFTSHNILPMMTSMAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTM---ISVFSPSMAILY---FMTYIIITTPLM 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 348 IIHAVSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILELSFEKYYIILAFWLASSAAfLTAFYSIR 427
Cdd:MTH00011 213 LLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSL-MNLFYYLN 291
|
330 340
....*....|....*....|....*....
gi 164421187 428 LIYFTFIINSNAPKEVFLKIHESSKIILF 456
Cdd:MTH00011 292 LIFNFMYLSPTFSSLKSAPYEPKTKILIS 320
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
202-434 |
2.96e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 46.35 E-value: 2.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 202 ITFEINNNSLTIICLLLFIgaigksaQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSlfecsSIALVV 278
Cdd:MTH00112 86 ITQLTNPTSCTLLTLALAM-------KLGLapfHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSN-----SLNPTL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 279 VTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMvcgISGYSVGLFHLfnhAFFKALLFLSAGSIIHAVSDEQDM 358
Cdd:MTH00112 154 LLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIA---IITYSPKLTLL---TFYIYILMTTPMFLTLNTTSTKTL 227
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 164421187 359 RKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLIL-ELSFEKyYIILAFwLASSAAFLTAFYSIRLIYFTFI 434
Cdd:MTH00112 228 KDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILqELTKQN-MTPTAT-IMAMLSLLSLFFYLRLTYISTI 302
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
29-317 |
6.37e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 45.70 E-value: 6.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 29 GIFTSNCIIISFLLSCYMYYEIILNFSPAYIRLWRWFDSELFTTYFGLQFDNLTATMLIIITSISALVHIYSIGYMAGDP 108
Cdd:MTH00206 8 MLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEP 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 109 HIPRFMaYLSLFTFLMIVLV---TSDNYLQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDLGLVIALIMI 185
Cdd:MTH00206 88 INRQRI-YITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 186 FKEFGTLDFSIISSSLITFEINNnsltIICLLLFIGAIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRS 265
Cdd:MTH00206 167 QNSLGSLSLYILYFSKLTTWNNN----LWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRI 242
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 164421187 266 SSLFECSSIALV-VVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVM 317
Cdd:MTH00206 243 ILILGPSTKLSSyFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTA 295
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
87-428 |
6.46e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 45.81 E-value: 6.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 87 IIITSISALVHIYSIGYMagdphIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIKANKAAIK 166
Cdd:MTH00217 90 ALLTPICILISWNSIKFL-----IKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYY 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 167 AMLINRVGDLGLVIALIMIFKEFGTLDFSIISSslitFEINNNSLTIICLLLFIGAIGKSAQLGLHTWLPDA-MEGPTPV 245
Cdd:MTH00217 165 FFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCC----LKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAhVEAPVAG 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 246 SALIHAATMVTAGVFLIIRSSSLF-ECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVM---VCGI 321
Cdd:MTH00217 241 SVILAGVLLKLGGYGFIRFSWPLLpEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLgifSHTI 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 322 SGYSVGLFHLFNHAFFKALLFLsAGSIIHAVSDEQDMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILELS 401
Cdd:MTH00217 321 QGLVAAIFLMLAHGLVSSALFI-AVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAA 399
|
330 340
....*....|....*....|....*..
gi 164421187 402 FEKYYIILAfwLASSAAFLTAFYSIRL 428
Cdd:MTH00217 400 FEYSYIVGV--LASLGMVLSAGYSIYL 424
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
194-468 |
1.08e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 44.81 E-value: 1.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 194 FSIISSSLITFEINNNSLTIICLLLFIgaigKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIirsSSLFECSS 273
Cdd:MTH00160 73 FSIILNMLNLMLFNNISSMLINSSLLL----KLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNF 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 274 IALVVVtiigaLTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISGYSVGLFHLFNHAF-FKALLFLSAGSIIHav 352
Cdd:MTH00160 146 IIIIII-----LSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIIsLSIILLFNKFNIFF-- 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 353 sdeqdMRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILELSFEKYYIILAFWLASSaAFLTAFYSIRLIYFT 432
Cdd:MTH00160 219 -----LNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMS-SLITLYFYLRISYSS 292
|
250 260 270
....*....|....*....|....*....|....*.
gi 164421187 433 FIINSNAPKEVFLKIHESSKIILFPLALLAFGGIFL 468
Cdd:MTH00160 293 LMLNYNKNKWNLKKKKNKFSLILNFLSFISLFGLIL 328
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
195-433 |
1.15e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 45.23 E-value: 1.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 195 SIISSSLITFEINNNSLTIICLLLFIGAIGKSAQLGLHTWLPDAMEG-PTPVSALIHAATMVTAGVFL--IIRSSSLFEC 271
Cdd:MTH00198 282 TILSATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLtsLVITSKLLLS 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 272 SSIALVVVTIIGALTaffaatvgvvQNDLKKVIAYSTCSQLGYMVMvcgisGYSVGLFHLFNHAFFKALLFLSA------ 345
Cdd:MTH00198 362 VAIISLVVGAFGALN----------QTRIKRLLAYSGIGHIGFILI-----GVSAGTYESLQASWTYAVTYLVSalasft 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 346 --------GSIIHAVSDEQDMRKMGALIKTI----------PFTYIMILIGSLSLMGFPYLTGFYSKDLIL--------E 399
Cdd:MTH00198 427 victleefGTRTPTSRQRDGSFGNYNLVRRLvdltilsrgqPYIAFSLAIVFLSLAGIPPLLGFLGKWFILvgsikiafS 506
|
250 260 270
....*....|....*....|....*....|....*..
gi 164421187 400 LSFEKYYIILAFWLASSAafLTAFYSIRL---IYFTF 433
Cdd:MTH00198 507 SSLSIYYLVALFAIICTC--ISAFYYIRIvatIYFNF 541
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
207-448 |
2.67e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 43.51 E-value: 2.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 207 NNNSLTIICLLLFIGAIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSSSLFECSSIALVVVTIIGALt 286
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMGLLICSVLSSLIGGI- 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 287 affaatVGVVQNDLKKVIAYSTCSQLGYMVMVCGISGYSVGLFHLFNHAFFKALLFLSAGSIIHAVSDEQDMRKMGALIK 366
Cdd:MTH00197 153 ------GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNL 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 367 tipftyIMILIGSLSLMGFPYLTGFYSKDLILELSFEKYYIILAFWLASSAAFlTAFYSIRLIYFTFiINSNAPKEVFLK 446
Cdd:MTH00197 227 ------VFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCF-SLYYYLSLAYKSL-ILSNWMINFLMK 298
|
..
gi 164421187 447 IH 448
Cdd:MTH00197 299 IN 300
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
208-479 |
2.71e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 43.95 E-value: 2.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 208 NNSLTIICLLLFI-GAIGKSAQLGLHTWLPDAMEGPTPVSALIHAA--TMVTAGVFLiirssSLFECSSIALVVvtiiGA 284
Cdd:PRK12664 139 NGQYTGYCKLLFMlGLLINCACFPASSWVVDAYPAASNFGIIVLSLftTKVAALVLL-----LFFSGEEILLFL----GI 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 285 LTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISG-----YSVGLFHLFNHAFFKALLFLSAGSIIHAvSDEQDMR 359
Cdd:PRK12664 210 ITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVINR-TRKFNLN 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 360 KMGALIKtIPFTYIMILIGSLSLMGFPYLTGFYSKDLILEL--SFEKYYIILAFWLASSAAFLTAFYSIRLIYFTFIINS 437
Cdd:PRK12664 289 RVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSidTAGLTLVLYKKLFLICSLLLFASVGLKFFWYAFISKS 367
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 164421187 438 nAPKEVFLKIHESSKIilfPLALLAFGGIFLGYLGKEYFLSN 479
Cdd:PRK12664 368 -KSKPEAEKVYIGSKL---SMIILVLICVVLGMFNSYLLFYN 405
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
74-316 |
3.79e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 39.96 E-value: 3.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 74 FGLQFDNLTATMLIIITSISALVHIYSIGYMAGDPHIPRFMAYLSLFTFLMIVLVTSDNYLQLFIGWEGVGLCSYLLINF 153
Cdd:MTH00205 51 SSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILG 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 154 WLTRIKANKAAIKAMLINRVGDLGLVIALIMIFKEFGTLDFSIISSslITFEINNNSLTIICLLLfiGAIGKSAQLGLHT 233
Cdd:MTH00205 131 WGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFP--LNFSDFYLFLYWIFLML--AFLVKLPMYFVHL 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 234 WLPDA-MEGPTpvsalihAATMVTAGVFL------IIR-SSSLFECSSIALVVVTIIGALTAFFAATVGVVQNDLKKVIA 305
Cdd:MTH00205 207 WLPKAhVEAPV-------SGSMILAGVLLklggygLIRiTSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIA 279
|
250
....*....|.
gi 164421187 306 YSTCSQLGYMV 316
Cdd:MTH00205 280 YSSVGHMGLMV 290
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
207-416 |
7.44e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 39.14 E-value: 7.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 207 NNNSLTIIC----LLLFIGAIGKSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLIIrssslFECSSIALVVV 279
Cdd:MTH00041 80 LSGSWSINGplntLSSIIITLALALKLGLapcHFWFPDVLQGLPFLQGLIIATWQKIAPLILLI-----SISNLLNSNIL 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 280 TIIGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISGYsVGLFHLFNHAFFKALLFLSA--GSIIHavsdeqd 357
Cdd:MTH00041 155 ILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPN-ASIIMFLIYIIINTSIFLIGnnFSLST------- 226
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 164421187 358 MRKMGALIKTIPFTYIMILIGSLSLMGFPYLTGFYSKDLILE-LSFEKYYIILAFWLASS 416
Cdd:MTH00041 227 LSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLYcLIQNNSILISIILIIGS 286
|
|
| |
