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Conserved domains on  [gi|164565481|ref|YP_001649197|]
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ATP synthase F0 subunit 6 (mitochondrion) [Seriatopora caliendrum]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009609)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 2-225 1.12e-94

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214447  Cd Length: 232  Bit Score: 276.15  E-value: 1.12e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481   2 NSSSYFEQFNIVWMFGFTNSTIMMTFVIIVVLLLFKGIELIPKRWQSVYEYLENYFYYITVQNLGNVGLIYFSFIVSLFV 81
Cdd:MTH00172   1 MSSSYFDQFNIVWLIGLTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFIISLFF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  82 FLVFLNILGLCPYVFTPTTHIVVTLGFSFSIVIGVTFSGFYKFKKDFFSILMPSGAPLILAPLLILIETVSYISRGVSLG 161
Cdd:MTH00172  81 FIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLG 160

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 164565481 162 IRLAANLSAGHLLFAILAGFGLVFK--------LAMSIMVFITLLEIAVAIIQAYVFCLLTLIYLVDTIVLH 225
Cdd:MTH00172 161 VRLAANLSAGHLLFAILAGFGFNMLcasgflslFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYLADTIVLH 232
 
Name Accession Description Interval E-value
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 2-225 1.12e-94

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 276.15  E-value: 1.12e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481   2 NSSSYFEQFNIVWMFGFTNSTIMMTFVIIVVLLLFKGIELIPKRWQSVYEYLENYFYYITVQNLGNVGLIYFSFIVSLFV 81
Cdd:MTH00172   1 MSSSYFDQFNIVWLIGLTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFIISLFF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  82 FLVFLNILGLCPYVFTPTTHIVVTLGFSFSIVIGVTFSGFYKFKKDFFSILMPSGAPLILAPLLILIETVSYISRGVSLG 161
Cdd:MTH00172  81 FIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLG 160

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 164565481 162 IRLAANLSAGHLLFAILAGFGLVFK--------LAMSIMVFITLLEIAVAIIQAYVFCLLTLIYLVDTIVLH 225
Cdd:MTH00172 161 VRLAANLSAGHLLFAILAGFGFNMLcasgflslFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYLADTIVLH 232
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 7-222 4.29e-43

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 144.66  E-value: 4.29e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481    7 FEQFNI--VWMFGFTNSTIMMTFVIIVVLLLFK-GIELIPKRWQSVYEYLENYFYYITVQNLGNVGLIYFSFIVSLFVFL 83
Cdd:TIGR01131   2 FSQFDIspITLFSLTLLSLILLLSLLIFLISSSlSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481   84 VFLNILGLCPYVFTPTTHIVVTLGFSFSIVIGVTFSGFYKFKKDFFSILMPSGAPLILAPLLILIETVSYISRGVSLGIR 163
Cdd:TIGR01131  82 LISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVR 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 164565481  164 LAANLSAGHLLFAILAGF------GLVFKLAMSIMVFITLLEIAVAIIQAYVFCLLTLIYLVDTI 222
Cdd:TIGR01131 162 LFANISAGHLLLTLLSGLlfslmsSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 69-218 2.74e-32

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 114.80  E-value: 2.74e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  69 GLIYFSFIVSLFVFLVFLNILGLCPYVFTPTTHIVVTLGFSFSIVIGVTFSGFYKFKKDFFSILMPSGAPLILAPLLILI 148
Cdd:cd00310    1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 164565481 149 ETVSYISRGVSLGIRLAANLSAGHLLFAILAGFGLVFKLAMS-----IMVFITLLEIAVAIIQAYVFCLLTLIYL 218
Cdd:cd00310   81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGllpllLPVALTLLELFVAFIQAYVFTLLTAVYI 155
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 21-218 7.65e-32

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 115.17  E-value: 7.65e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  21 STIMMTFVIIVVLLLFKGIELIPKRWQSVYEYLENYFYYITVQNLGNVGLIYFSFIVSLFVFLVFLNILGLCPYVFTPTT 100
Cdd:COG0356    6 SWLAMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTA 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481 101 HIVVTLGFSFSIVIGVTFSGFYK--FKKDFFSILMPSgaPLILAPLLILIETVSYISRGVSLGIRLAANLSAGHLLFAIL 178
Cdd:COG0356   86 DINVTLALALIVFVLVHYYGIKKkgLGGYLKHLFFPP--FPWLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLL 163

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 164565481 179 AGFGLVFK---LAMSIMVFITLLEIAVAIIQAYVFCLLTLIYL 218
Cdd:COG0356  164 AGLAPFLLlgvLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYI 206
ATP-synt_A pfam00119
ATP synthase A chain;
22-218 8.40e-29

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 107.58  E-value: 8.40e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481   22 TIMMTFVIIVVLLLF-----KGIELIPKRWQSVYEYLENYFYYITVQNLGN-VGLIYFSFIVSLFVFLVFLNILGL---C 92
Cdd:pfam00119   1 LLMSLIVALILLLFLllatrKTKKLVPGRLQNFVEMLVEFVDNIVKDNIGKkKGRKFFPLLLTLFFFILVSNLLGLipkS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481   93 PYVFTPTTHIVVTLGFSFSIVIGVTFSGFYK--FKKDFFSILMPSgAPLILAPLLILIETVSYISRGVSLGIRLAANLSA 170
Cdd:pfam00119  81 PGGFTVTADINVTLALALIVFLLVHYYGIKKhgLGGYFKKLFVPP-VPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLA 159

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 164565481  171 GHLLFAILAGFGLVFKLAMSIM--------VFITLLEIAVAIIQAYVFCLLTLIYL 218
Cdd:pfam00119 160 GHLLLLLLAGLIFALLSAGFLLgvippllgVAWTLFELLVAFIQAYVFTMLTAVYI 215
 
Name Accession Description Interval E-value
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 2-225 1.12e-94

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 276.15  E-value: 1.12e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481   2 NSSSYFEQFNIVWMFGFTNSTIMMTFVIIVVLLLFKGIELIPKRWQSVYEYLENYFYYITVQNLGNVGLIYFSFIVSLFV 81
Cdd:MTH00172   1 MSSSYFDQFNIVWLIGLTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFIISLFF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  82 FLVFLNILGLCPYVFTPTTHIVVTLGFSFSIVIGVTFSGFYKFKKDFFSILMPSGAPLILAPLLILIETVSYISRGVSLG 161
Cdd:MTH00172  81 FIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLG 160

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 164565481 162 IRLAANLSAGHLLFAILAGFGLVFK--------LAMSIMVFITLLEIAVAIIQAYVFCLLTLIYLVDTIVLH 225
Cdd:MTH00172 161 VRLAANLSAGHLLFAILAGFGFNMLcasgflslFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYLADTIVLH 232
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 4-225 2.11e-76

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 230.28  E-value: 2.11e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481   4 SSYFEQFNIV-----------WMFGFTNSTIMMTFVIIVVLLLFKGIELIPKRWQSVYEYLENYFYYITVQNLGNVGLIY 72
Cdd:MTH00175   3 AAYFDQFNIIrlitiqaflgdWLVTFTNSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKY 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  73 FSFIVSLFVFLVFLNILGLCPYVFTPTTHIVVTLGFSFSIVIGVTFSGFYKFKKDFFSILMPSGAPLILAPLLILIETVS 152
Cdd:MTH00175  83 FPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLS 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481 153 YISRGVSLGIRLAANLSAGHLLFAILAGF-------GLVFK--LAMSIMVFITLLEIAVAIIQAYVFCLLTLIYLVDTIV 223
Cdd:MTH00175 163 YLIRAISLGVRLAANISAGHLLFAILSGFafnmlsnGLIILslFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDTIA 242


                 ..
gi 164565481 224 LH 225
Cdd:MTH00175 243 LH 244
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 7-222 4.29e-43

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 144.66  E-value: 4.29e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481    7 FEQFNI--VWMFGFTNSTIMMTFVIIVVLLLFK-GIELIPKRWQSVYEYLENYFYYITVQNLGNVGLIYFSFIVSLFVFL 83
Cdd:TIGR01131   2 FSQFDIspITLFSLTLLSLILLLSLLIFLISSSlSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481   84 VFLNILGLCPYVFTPTTHIVVTLGFSFSIVIGVTFSGFYKFKKDFFSILMPSGAPLILAPLLILIETVSYISRGVSLGIR 163
Cdd:TIGR01131  82 LISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVR 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 164565481  164 LAANLSAGHLLFAILAGF------GLVFKLAMSIMVFITLLEIAVAIIQAYVFCLLTLIYLVDTI 222
Cdd:TIGR01131 162 LFANISAGHLLLTLLSGLlfslmsSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 4-225 1.20e-38

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 134.30  E-value: 1.20e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481   4 SSYFEQFNIVWMFG----------------FTNSTIMMTFVIIVVLLLFK---GIELIPKRWQSVYEYLENYFYYITVQN 64
Cdd:MTH00174   3 AAYFDQFNIIPIFSiwvyflsfwingeffcFTNTFFMMSFAVFLFYTIGAkgnNNTLVPNRILVGLELIYSHFYTVLKDN 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  65 LGNVGLIYFSFIVSLFVFLVFLNILGLCPYVFTPTTHIVVTLGFSFSIVIGVTFSGFYKFKKDFFSILMPSGAPLILAPL 144
Cdd:MTH00174  83 LGNKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPL 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481 145 LILIETVSYISRGVSLGIRLAANLSAGHLLFAILAGFGLVFK---------LAMSIMVFITLLEIAVAIIQAYVFCLLTL 215
Cdd:MTH00174 163 LTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMIntgiligsfVPFAILIFVTILEMAVAIIQAYVFTLLTI 242

                        250
                 ....*....|
gi 164565481 216 IYLVDTIVLH 225
Cdd:MTH00174 243 VYLRDTVELH 252
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 69-218 2.74e-32

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 114.80  E-value: 2.74e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  69 GLIYFSFIVSLFVFLVFLNILGLCPYVFTPTTHIVVTLGFSFSIVIGVTFSGFYKFKKDFFSILMPSGAPLILAPLLILI 148
Cdd:cd00310    1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 164565481 149 ETVSYISRGVSLGIRLAANLSAGHLLFAILAGFGLVFKLAMS-----IMVFITLLEIAVAIIQAYVFCLLTLIYL 218
Cdd:cd00310   81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGllpllLPVALTLLELFVAFIQAYVFTLLTAVYI 155
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 21-218 7.65e-32

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 115.17  E-value: 7.65e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  21 STIMMTFVIIVVLLLFKGIELIPKRWQSVYEYLENYFYYITVQNLGNVGLIYFSFIVSLFVFLVFLNILGLCPYVFTPTT 100
Cdd:COG0356    6 SWLAMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTA 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481 101 HIVVTLGFSFSIVIGVTFSGFYK--FKKDFFSILMPSgaPLILAPLLILIETVSYISRGVSLGIRLAANLSAGHLLFAIL 178
Cdd:COG0356   86 DINVTLALALIVFVLVHYYGIKKkgLGGYLKHLFFPP--FPWLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLL 163

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 164565481 179 AGFGLVFK---LAMSIMVFITLLEIAVAIIQAYVFCLLTLIYL 218
Cdd:COG0356  164 AGLAPFLLlgvLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYI 206
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 4-217 3.35e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 108.72  E-value: 3.35e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481   4 SSYFEQFNIVWMFGFTNSTIMMTFVIIVVLLLFKgieLIPKRWQSVYEYLENYFYYITVQNLGNVGLIYFSFIVSLFVFL 83
Cdd:MTH00157   3 TNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFW---LIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  84 VFLNILGLCPYVFTPTTHIVVTLGFSFSIVIGVTFSGFYKFKKDFFSILMPSGAPLILAPLLILIETVSYISRGVSLGIR 163
Cdd:MTH00157  80 LFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVR 159

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 164565481 164 LAANLSAGHLLFAILAGFGLVFKLAMSIMVFIT-----LLEIAVAIIQAYVFCLLTLIY 217
Cdd:MTH00157 160 LAANMIAGHLLLTLLGNTGPSLSSMILSILILIqilllILESAVAIIQSYVFSVLSTLY 218
ATP-synt_A pfam00119
ATP synthase A chain;
22-218 8.40e-29

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 107.58  E-value: 8.40e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481   22 TIMMTFVIIVVLLLF-----KGIELIPKRWQSVYEYLENYFYYITVQNLGN-VGLIYFSFIVSLFVFLVFLNILGL---C 92
Cdd:pfam00119   1 LLMSLIVALILLLFLllatrKTKKLVPGRLQNFVEMLVEFVDNIVKDNIGKkKGRKFFPLLLTLFFFILVSNLLGLipkS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481   93 PYVFTPTTHIVVTLGFSFSIVIGVTFSGFYK--FKKDFFSILMPSgAPLILAPLLILIETVSYISRGVSLGIRLAANLSA 170
Cdd:pfam00119  81 PGGFTVTADINVTLALALIVFLLVHYYGIKKhgLGGYFKKLFVPP-VPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLA 159

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 164565481  171 GHLLFAILAGFGLVFKLAMSIM--------VFITLLEIAVAIIQAYVFCLLTLIYL 218
Cdd:pfam00119 160 GHLLLLLLAGLIFALLSAGFLLgvippllgVAWTLFELLVAFIQAYVFTMLTAVYI 215
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 13-218 1.34e-27

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 104.49  E-value: 1.34e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  13 VWMFGFTNSTIMMTFVIIVVLLLF----KGIELIPKRWQSVYEYLENYFYYITVQNLGNVGLIYFSFIVSLFVFLVFLNI 88
Cdd:PRK05815   9 FGGFNFDSLLLSVLLGVLILLLFAlvatRKLSGVPGGLQNFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLFLFILLMNL 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  89 LGLCP-YVFTPTTHIVVTLGFSFSIVIGVTFSGFYKFKKDFFsilmPSGAPLILAPLLILIETVSYISRGVSLGIRLAAN 167
Cdd:PRK05815  89 LGLIPyLLFPPTADINVTLALALIVFVLVIYYGIKKKGLGGY----LKEFYLQPHPLLLPIEIISEFSRPISLSLRLFGN 164

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 164565481 168 LSAGHLLFAILAGFG----LVFKLAMSIMVFITLLEIAVAIIQAYVFCLLTLIYL 218
Cdd:PRK05815 165 MLAGELILALIALLGgaglLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYI 219
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 5-218 7.85e-26

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 100.02  E-value: 7.85e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481   5 SYFEQFNIVWMFGFTNSTIMMTFVIIVVLLLFKGieLIPKRWQSVYEYLENYFYYITVQNLGNVGLIYFSFIVSLFVFLV 84
Cdd:MTH00179   4 SMFDQFESPSLLGIPLLALALLLPWLLFPSLTNR--WLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFLL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  85 FLNILGLCPYVFTPTTHIVVTLGFSFSIVIGVTFSGFYKFKKDFFSILMPSGAPLILAPLLILIETVSYISRGVSLGIRL 164
Cdd:MTH00179  82 TLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVRL 161

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 164565481 165 AANLSAGHLL--------FAILAGFGLVFKLAMSIMVFITLLEIAVAIIQAYVFCLLTLIYL 218
Cdd:MTH00179 162 TANITAGHLLmhlissavFVLMNFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 76-218 6.20e-25

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 97.64  E-value: 6.20e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  76 IVSLFVFLVFLNILGLCPYVFTPTTHIVVTLGFSFSIVIGVTFSGFYKFKKDFFSILMPSGAPLILAPLLILIETVSYIS 155
Cdd:MTH00132  73 LTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFI 152

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 164565481 156 RGVSLGIRLAANLSAGHLL--------FAILAGFGLVFKLAMSIMVFITLLEIAVAIIQAYVFCLLTLIYL 218
Cdd:MTH00132 153 RPLALGVRLTANLTAGHLLiqliataaFVLLPLMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 7-218 2.61e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 96.26  E-value: 2.61e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481   7 FEQFNIVWMFGFTNSTIMMTFVIIVVLLLFKGIELIPKRWQSVYEYLENYFYYITVQNLGNVGLIYFSFIVSLFVFLVFL 86
Cdd:MTH00176   6 FSSFDPPNKNIFSMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFILVMSL 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  87 NILGLCPYVFTPTTHIVVTLGFSFSIVIGVTFSGFYKFKKDFFSILMPSGAPLILAPLLILIETVSYISRGVSLGIRLAA 166
Cdd:MTH00176  86 NLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLAVRLAA 165

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481 167 NLSAGHLLFAILAGFG--------LVFKLAMSIMVFITLLEIAVAIIQAYVFCLLTLIYL 218
Cdd:MTH00176 166 NLSAGHLLLGLLGAAMwgllpvspLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYL 225
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 5-218 3.76e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 95.66  E-value: 3.76e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481   5 SYFEQFNIVWMFGFtnSTIMMTFVIIVVLLLFKGIELIPKRWQSVYEYLENYFYYITVQNLGNVGLIYFSFIVSLFVFLV 84
Cdd:MTH00120   4 NFFDQFSSPELLGI--PLILLAMLIPALLIPSPKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLMLLLL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  85 FLNILGLCPYVFTPTTHIVVTLGFSFSIVIGVTFSGFYKFKKDFFSILMPSGAPLILAPLLILIETVSYISRGVSLGIRL 164
Cdd:MTH00120  82 LINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVRL 161

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 164565481 165 AANLSAGHLL--------FAILAGFGLVFKLAMSIMVFITLLEIAVAIIQAYVFCLLTLIYL 218
Cdd:MTH00120 162 TANLTAGHLLiqlistatLNLLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 76-218 1.18e-23

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 94.26  E-value: 1.18e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  76 IVSLFVFLVFLNILGLCPYVFTPTTHIVVTLGFSFSIVIGVTFSGFYKFKKDFFSILMPSGAPLILAPLLILIETVSYIS 155
Cdd:MTH00073  73 LTSLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFI 152

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 164565481 156 RGVSLGIRLAANLSAGHLL--------FAILAGFGLVFKLAMSIMVFITLLEIAVAIIQAYVFCLLTLIYL 218
Cdd:MTH00073 153 RPLALGVRLTANLTAGHLLiqlistatLVLLPLMPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 21-217 9.59e-23

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 92.10  E-value: 9.59e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  21 STIMMTFVIIVVLLLFKGIELIPKRWQSVYEYLENYFYYITVQNLGNVGLIYFSFIVSLFVFLVFLNILGLCPYVFTPTT 100
Cdd:MTH00005  22 STAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALFTMIILMNLSGLLPYVFSTSS 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481 101 HIVVTLGFSFSIVIGVTFSGFYKFKKDFFSILMPSGAPLILAPLLILIETVSYISRGVSLGIRLAANLSAGHLLFAIL-- 178
Cdd:MTH00005 102 HLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFRLAANMSAGHIVLSLIgi 181

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 164565481 179 ----AGFGLVFKLAM--SIMVFITLLEIAVAIIQAYVFCLLTLIY 217
Cdd:MTH00005 182 yaasALFSSISSTILliLTQMGYILFEVGICLIQAYIFCLLLSLY 226
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 4-222 4.69e-22

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 90.03  E-value: 4.69e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481   4 SSYFEQFNIVWMFGFTNSTIMMTFVIIVVLLLFKgIELIPKRWQSVYEYLENYFYYITVQNLGNVGLIYFSFIVSLFVFL 83
Cdd:MTH00035   5 NSIFGQFSPDTILFIPLTLLSSVIALSWLFFINP-TNWLPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVFILI 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  84 VFLNILGLCPYVFTPTTHIVVTLGFSFSIVIGVTFSGFYKFKKDFFSILMPSGAPLILAPLLILIETVSYISRGVSLGIR 163
Cdd:MTH00035  84 LSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLR 163

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 164565481 164 LAANLSAGHLL-------FAILAGFGLVFKLAMSIMVFITLLEIAVAIIQAYVFCLLTLIYLVDTI 222
Cdd:MTH00035 164 LAANLTAGHLLifllstaIWELSNSPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQNI 229
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 75-221 7.50e-22

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 89.54  E-value: 7.50e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  75 FIVSLFVFLVFLNILGLCPYVFTPTTHIVVTLGFSFSIVIGVTFSGFYKFKKDFFSILMPSGAPLILAPLLILIETVSYI 154
Cdd:MTH00173  74 LLSSLFLFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSIL 153

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 164565481 155 SRGVSLGIRLAANLSAGHLLFAILAGFGLVFKLAMS---------IMVFITLLEIAVAIIQAYVFCLLTLIYLVDT 221
Cdd:MTH00173 154 IRPLTLTVRLLANISAGHIVLTLIGNYLSSSLFSSSvvslllvllIQVGYFIFEVAVMLIQAYIFTLLIKLYSDEH 229
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 76-220 6.36e-21

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 86.93  E-value: 6.36e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  76 IVSLFVFLVFLNILGLCPYVFTPTTHIVVTLGFSFSIVIGVTFSGFYKFKKDFFSILMPSGAPLILAPLLILIETVSYIS 155
Cdd:MTH00101  72 LMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFI 151

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 164565481 156 RGVSLGIRLAANLSAGHLLFAILAGFGLVF---KLAMSIMVFI-----TLLEIAVAIIQAYVFCLLTLIYLVD 220
Cdd:MTH00101 152 QPMALAVRLTANITAGHLLIHLIGGATLALmsiSTTTALITFIilillTILEFAVALIQAYVFTLLVSLYLHD 224
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 19-218 3.39e-13

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 67.46  E-value: 3.39e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  19 TNSTIMMTFVIIVVLLLFKGI---------ELIPKRWQSVYEYLENYFYY-ITVQNLGNVGLIYFSFIVSLFVFLVFLNI 88
Cdd:PRK13419 107 TKHVVMMWIASAILLVVFLAAgrkykkmtkSQAPKGLANAMEALVEFIRLdVAKSNIGHGYEKFLPYLLTVFFFILVCNL 186

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  89 LGLCPYVFTPTTHIVVTLGFS-FSIVIgVTFSGFYKFKKDFFSILMPSGAPLILAPLLILIETVSYISRGVSLGIRLAAN 167
Cdd:PRK13419 187 LGLVPYGATATGNINVTLTLAvFTFFI-TQYAAIKAHGIKGYLAHLTGGTHWSLWIIMIPIEFIGLFTKPFALTVRLFAN 265

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481 168 LSAGHllFAILAGFGLVFKL-------AMSI--MVFITLLEIAVAIIQAYVFCLLTLIYL 218
Cdd:PRK13419 266 MTAGH--IVILSLIFISFILksyivavAVSVpfAIFIYLLELFVAFLQAYIFTMLSALFI 323
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 23-218 7.24e-07

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 48.20  E-value: 7.24e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  23 IMMTFVIIVVLLLFKgIELIPKRWQSVYEYLENYFYYITVQNLGNVGLIYFSFIVSLFVFLVFLNILGLCPYVFTPTTHI 102
Cdd:PRK13420  26 IMIVLVLASWLTTRR-LSLDPGRFQVALEGVVSTIEDAIKEVLPRHARLVLPFVGTLWIFILVANLIGLIPGFHSPTADL 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481 103 VVTLGFSFSIVI-----GVTFSGFYKFKKDFFS---ILMPsgaplilapllilIETVSYISRGVSLGIRLAANLSA---G 171
Cdd:PRK13420 105 SVTAALALLVFFsvhwfGIRAEGLREYLKHYLSpspFLLP-------------FHLISEITRTLALAVRLFGNIMSlelA 171

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 164565481 172 HLLFAILAGFglvfklamSIMVFITLLEIAVAIIQAYVFCLLTLIYL 218
Cdd:PRK13420 172 ALLVLLVAGF--------LVPVPILMLHIIEALVQAYIFGMLALIYI 210
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 69-218 8.69e-07

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 48.73  E-value: 8.69e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  69 GLIYFSFIVSLFVFLVFLNILGLCPYV-----------------------------------FTPTTHIVVTLGFSFSIV 113
Cdd:PRK13417 154 GHSYYHYIFTLFFFILFCNLMGLVPSVgeltvvasdygglvalgvmdhtphalptfakvwsgITVTGDISVTMTLALLTM 233

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481 114 IGVTFSGFYKFKKDFFSILMPSGAPLILAPLLILIE-TVSYISRGVSLGIRLAANLSAGHLLFAILAGFGLVFK----LA 188
Cdd:PRK13417 234 FLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEfIVSPMAKTFALTVRLLANMTAGHVIILALMGFIFQFQswgiVP 313

                        170       180       190
                 ....*....|....*....|....*....|..
gi 164565481 189 MSIM--VFITLLEIAVAIIQAYVFCLLTLIYL 218
Cdd:PRK13417 314 VSVIgsGLIYVLEIFVAFLQAYIFVLLTSLFV 345
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 60-218 1.18e-06

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 47.28  E-value: 1.18e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  60 ITVQNLGNVGLIYFSFIVSLFVFLVFLNILGLCPYVFTPTTHIVVTlgFSFSIVIGVTFSGFYKFKKDFFSILMP-SGAP 138
Cdd:MTH00087  39 IIVFSYSNKLPLSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFT--FLYALVAWLSTFLSFLSKSEKFSVYLSkGSDS 116

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481 139 LILAPLLILIETVSYISRGVSLGIRLAANLSAGHLLFAILAGFGLVFklaMSIMVFITLLEIAVAIIQAYVFCLLTLIYL 218
Cdd:MTH00087 117 FLKTFSMLFVEIVSELSRPLALTLRLTVNLMVGHLISSLLNFLGEKY---VWLSILAIMMECFVAFIQSYIFSRLIYLYL 193
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 24-218 3.62e-05

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 43.15  E-value: 3.62e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  24 MMTFVIIVVLLLFKGIELIPKRWQSVYEYLENYFYYITVQNLGNVGLIYFSFIVSLFVFLVFLNILGLCPYVFTPTTHI- 102
Cdd:PRK13421  29 IMAVLAAGSALATRRLSLAPGRLQSVLELVVTTIDAQIRDTMQTDPAPYRALIGTLFLFVLVANWSSLVPGVEPPTAHLe 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481 103 ----VVTLGFSFSIVIGVTFSGFYKFKKDFFS---ILMPsgaplilapllilIETVSYISRGVSLGIRLAANLSAGhlLF 175
Cdd:PRK13421 109 tdaaLALIVFLATIYYGVRARGVRGYLATFAEptwVMIP-------------LNLVEQLTRTFSLIVRLFGNVMSG--VF 173

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 164565481 176 AIlagfGLVFKLAmSIMVFITL--LEIAVAIIQAYVFCLLTLIYL 218
Cdd:PRK13421 174 VI----GIVLSLA-GLLVPIPLmaLDLLTGAVQAYIFAVLAMVFI 213
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 55-211 2.81e-03

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 37.17  E-value: 2.81e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565481  55 NYFYYITVQNLGNVGLIYFSFIVSLFVFLVFLniLGLCPYVFTPTTHIVVTLGFSFSIVIGVTFSGFYKFKKDFFSILMP 134
Cdd:MTH00050   7 SSLFSLIYKLILGGSVSYYYSVVLFIVLFLFL--LYRLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVP 84

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 164565481 135 SGAPLILAPLLILIETVSYISRGVSLGIRLAANLSAGHLLFAILAGFGLVFKLAMSIMVFITLLEIAVAIIQAYVFC 211
Cdd:MTH00050  85 VGTPLYICPFVCIAETISYIIRPVVLILRPFINISLGCFGGVALGNLCFISYWWFLVLFFLFFYEVFVALVHWFIVS 161
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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