|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00175 |
ATP synthase F0 subunit 6; Provisional |
1-242 |
6.34e-92 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177228 Cd Length: 244 Bit Score: 270.34 E-value: 6.34e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 1 MNYSYFNQFNISKLFYI--KLRETILSFRNLSLILILIIIIITIIQHRNRILIRRNTIINKILYTIAYTLTKEHLNIKHK 78
Cdd:MTH00175 1 MLAAYFDQFNIIRLITIqaFLGDWLVTFTNSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 79 TFLPFIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIRRTIKRIQNFKRKFIRILTPQGAPLILAPFLVLIET 158
Cdd:MTH00175 81 KYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIET 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 159 ASYLTRAISLGVRLAANISAGHLLLTILSRFSFNILLSELPALSFIPLTILTFIAILEIAVALIQAYVFTLLSTIYLSDR 238
Cdd:MTH00175 161 LSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDT 240
|
....
gi 189095558 239 IKIH 242
Cdd:MTH00175 241 IALH 244
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
53-237 |
4.85e-41 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 140.03 E-value: 4.85e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 53 RNTIINKILYTIAYTLTKEHLNIKHKTFLPFIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIRRTIKRIQNF 132
Cdd:TIGR01131 43 RWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKH 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 133 KRKFIRILTPQGAPLILAPFLVLIETASYLTRAISLGVRLAANISAGHLLLTILSRFSFNillSELPALSFIPLTILTFI 212
Cdd:TIGR01131 123 PKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGHLLLTLLSGLLFS---LMSSAIFALLLLILVAL 199
|
170 180
....*....|....*....|....*
gi 189095558 213 AILEIAVALIQAYVFTLLSTIYLSD 237
Cdd:TIGR01131 200 IILEIFVAFIQAYVFTLLTCLYLND 224
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
78-236 |
1.11e-38 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 131.75 E-value: 1.11e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 78 KTFLPFIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIRRTIKRIQNFKRKFIRILTPQGAPLILAPFLVLIE 157
Cdd:cd00310 2 KKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIE 81
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 189095558 158 TASYLTRAISLGVRLAANISAGHLLLTILSRFSFNILLSelpaLSFIPLTILTFIAILEIAVALIQAYVFTLLSTIYLS 236
Cdd:cd00310 82 LISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSS----VGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
76-236 |
4.27e-30 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 111.43 E-value: 4.27e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 76 KHKTFLPFIFNLLIFLTRINLIGLL---PYVLTTTAHIIITFSLSLTILIRRTIK--RIQNFKRKFIRILTPQgAPLILA 150
Cdd:pfam00119 53 KGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYgiKKHGLGGYFKKLFVPP-VPLPLV 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 151 PFLVLIETASYLTRAISLGVRLAANISAGHLLLTILSRFSFnILLSELPALSFIPLTILTFIAILEIAVALIQAYVFTLL 230
Cdd:pfam00119 132 PLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIF-ALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTML 210
|
....*.
gi 189095558 231 STIYLS 236
Cdd:pfam00119 211 TAVYIS 216
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
76-237 |
2.60e-25 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 98.61 E-value: 2.60e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 76 KHKTFLPFIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIrrtIKRIQNFKRK----FIRILTPQGAPlILAP 151
Cdd:COG0356 53 KGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFV---LVHYYGIKKKglggYLKHLFFPPFP-WLAP 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 152 FLVLIETASYLTRAISLGVRLAANISAGHLLLTILsrfsfnILLSELPALSFIPLTILTFIAILEIAVALIQAYVFTLLS 231
Cdd:COG0356 129 LMLPIEIISELARPLSLSLRLFGNMFAGHIILLLL------AGLAPFLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLT 202
|
....*.
gi 189095558 232 TIYLSD 237
Cdd:COG0356 203 AVYISL 208
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00175 |
ATP synthase F0 subunit 6; Provisional |
1-242 |
6.34e-92 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177228 Cd Length: 244 Bit Score: 270.34 E-value: 6.34e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 1 MNYSYFNQFNISKLFYI--KLRETILSFRNLSLILILIIIIITIIQHRNRILIRRNTIINKILYTIAYTLTKEHLNIKHK 78
Cdd:MTH00175 1 MLAAYFDQFNIIRLITIqaFLGDWLVTFTNSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 79 TFLPFIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIRRTIKRIQNFKRKFIRILTPQGAPLILAPFLVLIET 158
Cdd:MTH00175 81 KYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIET 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 159 ASYLTRAISLGVRLAANISAGHLLLTILSRFSFNILLSELPALSFIPLTILTFIAILEIAVALIQAYVFTLLSTIYLSDR 238
Cdd:MTH00175 161 LSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDT 240
|
....
gi 189095558 239 IKIH 242
Cdd:MTH00175 241 IALH 244
|
|
| ATP6 |
MTH00172 |
ATP synthase F0 subunit 6; Provisional |
1-242 |
1.53e-57 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214447 Cd Length: 232 Bit Score: 182.55 E-value: 1.53e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 1 MNYSYFNQFNISKLFyiklretilSFRNLSLILILIIIIITIIQHRNRILIRRNTIINKILYTIAYTLTKEHLNIKHKTF 80
Cdd:MTH00172 1 MSSSYFDQFNIVWLI---------GLTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKY 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 81 LPFIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIRRTIKRIQNFKRKFIRILTPQGAPLILAPFLVLIETAS 160
Cdd:MTH00172 72 FPFIISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVS 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 161 YLTRAISLGVRLAANISAGHLLLTILSRFSFNILLSELPaLSFIPLTILTFIAILEIAVALIQAYVFTLLSTIYLSDRIK 240
Cdd:MTH00172 152 YISRAISLGVRLAANLSAGHLLFAILAGFGFNMLCASGF-LSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYLADTIV 230
|
..
gi 189095558 241 IH 242
Cdd:MTH00172 231 LH 232
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
53-237 |
4.85e-41 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 140.03 E-value: 4.85e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 53 RNTIINKILYTIAYTLTKEHLNIKHKTFLPFIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIRRTIKRIQNF 132
Cdd:TIGR01131 43 RWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKH 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 133 KRKFIRILTPQGAPLILAPFLVLIETASYLTRAISLGVRLAANISAGHLLLTILSRFSFNillSELPALSFIPLTILTFI 212
Cdd:TIGR01131 123 PKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGHLLLTLLSGLLFS---LMSSAIFALLLLILVAL 199
|
170 180
....*....|....*....|....*
gi 189095558 213 AILEIAVALIQAYVFTLLSTIYLSD 237
Cdd:TIGR01131 200 IILEIFVAFIQAYVFTLLTCLYLND 224
|
|
| ATP6 |
MTH00174 |
ATP synthase F0 subunit 6; Provisional |
59-242 |
3.62e-39 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 133799 Cd Length: 252 Bit Score: 136.22 E-value: 3.62e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 59 KILYTIAYTLTKEHLNIKHKTFLPFIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIRRTIKRIQNFKRKFIR 138
Cdd:MTH00174 69 ELIYSHFYTVLKDNLGNKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFS 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 139 ILTPQGAPLILAPFLVLIETASYLTRAISLGVRLAANISAGHLLLTILSRFSFNILLSELPALSFIPLTILTFIAILEIA 218
Cdd:MTH00174 149 ILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIGSFVPFAILIFVTILEMA 228
|
170 180
....*....|....*....|....
gi 189095558 219 VALIQAYVFTLLSTIYLSDRIKIH 242
Cdd:MTH00174 229 VAIIQAYVFTLLTIVYLRDTVELH 252
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
78-236 |
1.11e-38 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 131.75 E-value: 1.11e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 78 KTFLPFIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIRRTIKRIQNFKRKFIRILTPQGAPLILAPFLVLIE 157
Cdd:cd00310 2 KKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIE 81
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 189095558 158 TASYLTRAISLGVRLAANISAGHLLLTILSRFSFNILLSelpaLSFIPLTILTFIAILEIAVALIQAYVFTLLSTIYLS 236
Cdd:cd00310 82 LISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSS----VGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP6 |
MTH00157 |
ATP synthase F0 subunit 6; Provisional |
52-237 |
7.45e-35 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214441 Cd Length: 223 Bit Score: 124.12 E-value: 7.45e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 52 RRNTIINKILYTIAYTLtKEHLNIKHKTFLPFIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIRRTIKRIQN 131
Cdd:MTH00157 41 RYNILWNKILKTLHKEF-KTLLGPKNKGSTLIFISLFSFILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWIN 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 132 FKRKFIRILTPQGAPLILAPFLVLIETASYLTRAISLGVRLAANISAGHLLLTILSRFSFNILLSELPaLSFIPLTILTf 211
Cdd:MTH00157 120 NTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLSSMILS-ILILIQILLL- 197
|
170 180
....*....|....*....|....*.
gi 189095558 212 iaILEIAVALIQAYVFTLLSTIYLSD 237
Cdd:MTH00157 198 --ILESAVAIIQSYVFSVLSTLYSSE 221
|
|
| ATP6 |
MTH00120 |
ATP synthase F0 subunit 6; Provisional |
1-235 |
1.18e-32 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177181 Cd Length: 227 Bit Score: 118.39 E-value: 1.18e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 1 MNYSYFNQFNISKLFYIKLreTILSfrnlsliliLIIIIITIIQHRNRILIRR-NTIINKILYTIAYTLTKEhLNIKHKT 79
Cdd:MTH00120 1 MNLNFFDQFSSPELLGIPL--ILLA---------MLIPALLIPSPKNRLLTNRlTTLQLWLIKLITKQLMLP-LNKKGHK 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 80 FLPFIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIRRTIKRIQNFKRKFIRILTPQGAPLILAPFLVLIETA 159
Cdd:MTH00120 69 WALILTSLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETI 148
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 189095558 160 SYLTRAISLGVRLAANISAGHLLLTILSRFSFNiLLSELPALSFIPLTILTFIAILEIAVALIQAYVFTLLSTIYL 235
Cdd:MTH00120 149 SLLIRPLALGVRLTANLTAGHLLIQLISTATLN-LLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYL 223
|
|
| ATP6 |
MTH00179 |
ATP synthase F0 subunit 6; Provisional |
1-235 |
8.41e-32 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177230 Cd Length: 227 Bit Score: 116.20 E-value: 8.41e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 1 MNYSYFNQFNISKLFYIKLRETILSFrnlsliLILIIIIITIIQHRNRILIRRNTIINKILYTIAytltkEHLNIKHKTF 80
Cdd:MTH00179 1 MMLSMFDQFESPSLLGIPLLALALLL------PWLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLM-----QPINKKGHKW 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 81 LPFIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIRRTIKRIQNFKRKFIRILTPQGAPLILAPFLVLIETAS 160
Cdd:MTH00179 70 AVLFLSLMLFLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETIS 149
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 189095558 161 YLTRAISLGVRLAANISAGHLLLTILSRFSFNiLLSELPALSFIPLTILTFIAILEIAVALIQAYVFTLLSTIYL 235
Cdd:MTH00179 150 LLIRPLALGVRLTANITAGHLLMHLISSAVFV-LMNFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYL 223
|
|
| ATP6 |
MTH00173 |
ATP synthase F0 subunit 6; Provisional |
83-237 |
9.41e-32 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214448 Cd Length: 231 Bit Score: 116.12 E-value: 9.41e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 83 FIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIRRTIKRIQNFKRKFIRILTPQGAPLILAPFLVLIETASYL 162
Cdd:MTH00173 74 LLSSLFLFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSIL 153
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 189095558 163 TRAISLGVRLAANISAGHLLLTILSRFSFNILLSELPALSFIPLTILTFIAILEIAVALIQAYVFTLLSTIYLSD 237
Cdd:MTH00173 154 IRPLTLTVRLLANISAGHIVLTLIGNYLSSSLFSSSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
76-236 |
4.27e-30 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 111.43 E-value: 4.27e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 76 KHKTFLPFIFNLLIFLTRINLIGLL---PYVLTTTAHIIITFSLSLTILIRRTIK--RIQNFKRKFIRILTPQgAPLILA 150
Cdd:pfam00119 53 KGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYgiKKHGLGGYFKKLFVPP-VPLPLV 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 151 PFLVLIETASYLTRAISLGVRLAANISAGHLLLTILSRFSFnILLSELPALSFIPLTILTFIAILEIAVALIQAYVFTLL 230
Cdd:pfam00119 132 PLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIF-ALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTML 210
|
....*.
gi 189095558 231 STIYLS 236
Cdd:pfam00119 211 TAVYIS 216
|
|
| ATP6 |
MTH00176 |
ATP synthase F0 subunit 6; Provisional |
80-237 |
2.66e-29 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214449 Cd Length: 229 Bit Score: 109.74 E-value: 2.66e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 80 FLPFIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIRRTIKRIQNFKRKFIRILTPQGAPLILAPFLVLIETA 159
Cdd:MTH00176 71 SASIIISLFILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELV 150
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 189095558 160 SYLTRAISLGVRLAANISAGHLLLTILSRfSFNILLSELPALSFIPLTILTFIAILEIAVALIQAYVFTLLSTIYLSD 237
Cdd:MTH00176 151 SLLIRPLTLAVRLAANLSAGHLLLGLLGA-AMWGLLPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDE 227
|
|
| ATP6 |
MTH00005 |
ATP synthase F0 subunit 6; Provisional |
78-237 |
1.64e-27 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 164583 Cd Length: 231 Bit Score: 105.20 E-value: 1.64e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 78 KTFLPFIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIRRTIKRIQNFKRKFIRILTPQGAPLILAPFLVLIE 157
Cdd:MTH00005 71 KGFSSLISALFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIE 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 158 TASYLTRAISLGVRLAANISAGHLLLTILSRFSFNILLSELPALSFIPLTILTFIaILEIAVALIQAYVFTLLSTIYLSD 237
Cdd:MTH00005 151 TISILVRPITLSFRLAANMSAGHIVLSLIGIYAASALFSSISSTILLILTQMGYI-LFEVGICLIQAYIFCLLLSLYSDD 229
|
|
| ATP6 |
MTH00035 |
ATP synthase F0 subunit 6; Validated |
1-239 |
2.65e-27 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177110 Cd Length: 229 Bit Score: 104.28 E-value: 2.65e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 1 MNYSYFNQFNISKLFYIKLrETILSFRNLSLILILIIiiitiiqhrNRILIRRNTIINKILYTIAYTLTKEHLNIKHKTF 80
Cdd:MTH00035 3 INNSIFGQFSPDTILFIPL-TLLSSVIALSWLFFINP---------TNWLPSRSQSIWLTFRQEILKLIFQNTNPNTAPW 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 81 LPFIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIRRTIKRIQNFKRKFIRILTPQGAPLILAPFLVLIETAS 160
Cdd:MTH00035 73 AGLLTTVFILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLS 152
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 189095558 161 YLTRAISLGVRLAANISAGHLLLTILSRFSFniLLSELPALSFIPLTILTFIAILEIAVALIQAYVFTLLSTIYLSDRI 239
Cdd:MTH00035 153 LFAQPIALGLRLAANLTAGHLLIFLLSTAIW--ELSNSPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQNI 229
|
|
| ATP6 |
MTH00132 |
ATP synthase F0 subunit 6; Provisional |
87-235 |
7.01e-27 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177190 Cd Length: 227 Bit Score: 103.41 E-value: 7.01e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 87 LLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIRRTIKRIQNFKRKFIRILTPQGAPLILAPFLVLIETASYLTRAI 166
Cdd:MTH00132 76 LMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPL 155
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 189095558 167 SLGVRLAANISAGHLLLTILSRFSFnILLSELPALSFIPLTILTFIAILEIAVALIQAYVFTLLSTIYL 235
Cdd:MTH00132 156 ALGVRLTANLTAGHLLIQLIATAAF-VLLPLMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYL 223
|
|
| ATP6 |
MTH00073 |
ATP synthase F0 subunit 6; Provisional |
87-235 |
9.76e-26 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177144 Cd Length: 227 Bit Score: 100.43 E-value: 9.76e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 87 LLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIRRTIKRIQNFKRKFIRILTPQGAPLILAPFLVLIETASYLTRAI 166
Cdd:MTH00073 76 LMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPL 155
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 189095558 167 SLGVRLAANISAGHLLLTILSRFSFnILLSELPALSFIPLTILTFIAILEIAVALIQAYVFTLLSTIYL 235
Cdd:MTH00073 156 ALGVRLTANLTAGHLLIQLISTATL-VLLPLMPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYL 223
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
76-237 |
2.60e-25 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 98.61 E-value: 2.60e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 76 KHKTFLPFIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIrrtIKRIQNFKRK----FIRILTPQGAPlILAP 151
Cdd:COG0356 53 KGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFV---LVHYYGIKKKglggYLKHLFFPPFP-WLAP 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 152 FLVLIETASYLTRAISLGVRLAANISAGHLLLTILsrfsfnILLSELPALSFIPLTILTFIAILEIAVALIQAYVFTLLS 231
Cdd:COG0356 129 LMLPIEIISELARPLSLSLRLFGNMFAGHIILLLL------AGLAPFLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLT 202
|
....*.
gi 189095558 232 TIYLSD 237
Cdd:COG0356 203 AVYISL 208
|
|
| ATP6 |
MTH00101 |
ATP synthase F0 subunit 6; Validated |
74-237 |
2.67e-25 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177163 Cd Length: 226 Bit Score: 99.26 E-value: 2.67e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 74 NIKHKTFLPFIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIRRTIKRIQNFKRKFIRILTPQGAPLILAPFL 153
Cdd:MTH00101 62 NTKGQTWSLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPML 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 154 VLIETASYLTRAISLGVRLAANISAGHLLLTILSRFSFnILLSELPALSFIPLTILTFIAILEIAVALIQAYVFTLLSTI 233
Cdd:MTH00101 142 VIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATL-ALMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSL 220
|
....
gi 189095558 234 YLSD 237
Cdd:MTH00101 221 YLHD 224
|
|
| PRK05815 |
PRK05815 |
F0F1 ATP synthase subunit A; Validated |
60-242 |
4.23e-22 |
|
F0F1 ATP synthase subunit A; Validated
Pssm-ID: 235617 Cd Length: 227 Bit Score: 90.62 E-value: 4.23e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 60 ILYTIAYTLTKEHLNIKHKTFLPFIFNLLIFLTRINLIGLLPYVL-TTTAHIIITFSLSLTILIRRTIKRIQNFK-RKFI 137
Cdd:PRK05815 52 MIVEFVRGQVKDNIGGKGKKFAPLAFTLFLFILLMNLLGLIPYLLfPPTADINVTLALALIVFVLVIYYGIKKKGlGGYL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 138 RILTPQGAPLILApflvlIETASYLTRAISLGVRLAANISAGHLLLTILSRFSFNILLselpaLSFIPLTILTFIAILEI 217
Cdd:PRK05815 132 KEFYLQPHPLLLP-----IEIISEFSRPISLSLRLFGNMLAGELILALIALLGGAGLL-----LALAPLILPVAWTIFEI 201
|
170 180
....*....|....*....|....*
gi 189095558 218 AVALIQAYVFTLLSTIYLSDRIKIH 242
Cdd:PRK05815 202 FVGTLQAYIFMMLTIVYISMAVEEE 226
|
|
| PRK13419 |
PRK13419 |
F0F1 ATP synthase subunit A; Provisional |
74-235 |
1.52e-15 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237381 Cd Length: 342 Bit Score: 74.39 E-value: 1.52e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 74 NIKH--KTFLPFIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSL-TILIRRTIKRIQNFKRKFIRILTpQGAPLILA 150
Cdd:PRK13419 162 NIGHgyEKFLPYLLTVFFFILVCNLLGLVPYGATATGNINVTLTLAVfTFFITQYAAIKAHGIKGYLAHLT-GGTHWSLW 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 151 PFLVLIETASYLTRAISLGVRLAANISAGHLLLTILSRFSFnILLSELPALSF-IPLTIltFIAILEIAVALIQAYVFTL 229
Cdd:PRK13419 241 IIMIPIEFIGLFTKPFALTVRLFANMTAGHIVILSLIFISF-ILKSYIVAVAVsVPFAI--FIYLLELFVAFLQAYIFTM 317
|
....*.
gi 189095558 230 LSTIYL 235
Cdd:PRK13419 318 LSALFI 323
|
|
| PRK13417 |
PRK13417 |
F0F1 ATP synthase subunit A; Provisional |
104-235 |
1.38e-08 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237380 Cd Length: 352 Bit Score: 54.51 E-value: 1.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 104 LTTTAHIIITFSLSLTILIRRTIKRIQNFKRKFIRILTPQGAPLILAPFLVLIE-TASYLTRAISLGVRLAANISAGHLL 182
Cdd:PRK13417 216 ITVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEfIVSPMAKTFALTVRLLANMTAGHVI 295
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 189095558 183 LTILSRFSFnillsELPALSFIPLTILT--FIAILEIAVALIQAYVFTLLSTIYL 235
Cdd:PRK13417 296 ILALMGFIF-----QFQSWGIVPVSVIGsgLIYVLEIFVAFLQAYIFVLLTSLFV 345
|
|
| PRK13420 |
PRK13420 |
F0F1 ATP synthase subunit A; Provisional |
55-242 |
1.14e-06 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237382 [Multi-domain] Cd Length: 226 Bit Score: 47.81 E-value: 1.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 55 TIINKILYTIaYTLTKEHLNIKHKTFLPFIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTIL--IRRTIKRIQNF 132
Cdd:PRK13420 50 VALEGVVSTI-EDAIKEVLPRHARLVLPFVGTLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFfsVHWFGIRAEGL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 133 KRKFIRILTPqgaplilAPFLVLIETASYLTRAISLGVRLAANISAGHLLltilsrfsfnILLSELPALSFIPLTILtfi 212
Cdd:PRK13420 129 REYLKHYLSP-------SPFLLPFHLISEITRTLALAVRLFGNIMSLELA----------ALLVLLVAGFLVPVPIL--- 188
|
170 180 190
....*....|....*....|....*....|
gi 189095558 213 aILEIAVALIQAYVFTLLSTIYLSDRIKIH 242
Cdd:PRK13420 189 -MLHIIEALVQAYIFGMLALIYIAGGIQAH 217
|
|
| ATP6 |
MTH00087 |
ATP synthase F0 subunit 6; Provisional |
83-236 |
2.52e-06 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177152 Cd Length: 195 Bit Score: 46.51 E-value: 2.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 83 FIFNLLIFLTRINLIGLLPYVLTTTAhiIITFSLSLTILIRRTIKRIQNFKRKFIRILTPQGAPLILAPF-LVLIETASY 161
Cdd:MTH00087 54 ISFFTFIVLLLFCFGGLFPYSFSPCG--MVEFTFLYALVAWLSTFLSFLSKSEKFSVYLSKGSDSFLKTFsMLFVEIVSE 131
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 189095558 162 LTRAISLGVRLAANISAGHLLLTILSRFSFNILLselpalsfipltILTFIAILEIAVALIQAYVFTLLSTIYLS 236
Cdd:MTH00087 132 LSRPLALTLRLTVNLMVGHLISSLLNFLGEKYVW------------LSILAIMMECFVAFIQSYIFSRLIYLYLN 194
|
|
| PRK13421 |
PRK13421 |
F0F1 ATP synthase subunit A; Provisional |
79-235 |
4.45e-05 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237383 Cd Length: 223 Bit Score: 43.15 E-value: 4.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 79 TFLPFIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIRRTIKRIQnfKRKFIRILTPQGAPLILAPFLVLIET 158
Cdd:PRK13421 76 PYRALIGTLFLFVLVANWSSLVPGVEPPTAHLETDAALALIVFLATIYYGVR--ARGVRGYLATFAEPTWVMIPLNLVEQ 153
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 189095558 159 asyLTRAISLGVRLAANISAGhllltilsRFSFNILLSELPALSFIPLTiltfiaILEIAVALIQAYVFTLLSTIYL 235
Cdd:PRK13421 154 ---LTRTFSLIVRLFGNVMSG--------VFVIGIVLSLAGLLVPIPLM------ALDLLTGAVQAYIFAVLAMVFI 213
|
|
| ATP6 |
MTH00050 |
ATP synthase F0 subunit 6; Validated |
75-228 |
4.08e-04 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177125 Cd Length: 170 Bit Score: 39.87 E-value: 4.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095558 75 IKHKTFLPFIFNLLIFLTRINLIGLLPYVLTTTAHIIITFSLSLTILIRRTIKRIQNFKRKFIRILTPQGAPLILAPFLV 154
Cdd:MTH00050 17 ILGGSVSYYYSVVLFIVLFLFLLYRLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVC 96
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 189095558 155 LIETASYLTRAISLGVRLAANISAGHLLLTILSRFSFnillselpaLSFIPLTILTFIAILEIAVALIQAYVFT 228
Cdd:MTH00050 97 IAETISYIIRPVVLILRPFINISLGCFGGVALGNLCF---------ISYWWFLVLFFLFFYEVFVALVHWFIVS 161
|
|
|