|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 732.91 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 1 MLKVLIPTIMLFPTIWLSSPKWLWTTTTTHSLLIASISLTWLKWTSEAGWTSSNTYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 81 SQNHINPEPISRQRSYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 161 LLVALLLLQQSTGTLSMLVLQYSQPLQLNSWGHMFWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 241 GYGMMRMMVMLDPLSKELAYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAH 320
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 321 GLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLTGLG 400
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 197935806 401 TLITAGYSLYMFLMSQRGPTPHHITGLQPFHTREHLLMALHLTPVILLVTKPELMWGWC 459
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 694.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 1 MLKVLIPTIMLFPTIWLSSPKWLWTTTTTHSLLIASISLTWLKWTSEaGWTSSNTYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSE-TMNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 81 SQNHINPEPISRQRSYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00068 80 SQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 161 LLVALLLLQQSTGTLSMLVLQYSQPLQLNSWGHMFWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 241 GYGMMRMMVMLDPLSKELAYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAH 320
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 321 GLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLTGLG 400
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 197935806 401 TLITAGYSLYMFLMSQRGPTPHHITGLQPFHTREHLLMALHLTPVILLVTKPELMWGW 458
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 683.85 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 1 MLKVLIPTIMLFPTIWLSSPKWLWTTTTTHSLLIASISLTWLKWTSEAGwTSSNTYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPT-KNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 81 SQNHINPEPISRQRSYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00124 80 SQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 161 LLVALLLLQQSTGTLSMLVLQYSQPLQLNSWGHMFWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 241 GYGMMRMMVMLDPLSKELAYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAH 320
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 321 GLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLTGLG 400
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 197935806 401 TLITAGYSLYMFLMSQRGPTPHHITGLQPFHTREHLLMALHLTPVILLVTKPELMWGW 458
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-460 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 662.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 1 MLKVLIPTIMLFPTIWLSSPKWLWTTTTTHSLLIASISLTWLKWTSEAGWTSSNTYlATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLF-FSDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 81 SQNHINPEPISRQRSYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00110 80 SQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 161 LLVALLLLQQSTGTLSMLVLQYSQPLQLNSWGHMFWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 241 GYGMMRMMVMLDPLSKELAYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAH 320
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 321 GLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLTGLG 400
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 401 TLITAGYSLYMFLMSQRGPTPHHITGLQPFHTREHLLMALHLTPVILLVTKPELMWGWCY 460
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-455 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 570.34 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 3 KVLIPTIMLFPTIWLSSPKWLWTTTTTHSLLIASISLTWLKWTSEAGWTSSNTYLATDPLSTPLLVLTCWLLPLMILASQ 82
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 83 NHINPEPISRQRSYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLL 162
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 163 VALLLLQQSTGTLSMLVLQYSQPLQlnsWGHMFWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGY 242
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLTT---WNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 243 GMMRMMVMLDPLSKELAYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGL 322
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 323 VSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLTGLGTL 402
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 197935806 403 ITAGYSLYMFLMSQRGPTPHHITGLQPFHTREHLLMALHLTPVILLVTKPELM 455
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
2.49e-170 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 486.41 E-value: 2.49e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 1 MLKVLIPTIMLFPTIWLSSPKWLWTTTTTHSLLIASISLTWLKWTSEAGWTSSNTYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 81 SQNHINPEPISRQRSYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 161 LLVALLLLQQSTGTLSMLVLQYSQPLQLNSWGHMFWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 241 GYGMMRMMVMLD-PLSKELAYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIA 319
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 320 HGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLTGL 399
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 197935806 400 GTLITAGYSLYMFLMSQRGPTPHHITGLQPFHTREHLLMALHLTPVILLVTKPELM 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNII 456
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
49-459 |
7.94e-128 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 376.87 E-value: 7.94e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 49 GWTSSNTYLATDPLSTPLLVLTCWLLPLMILASQNHINPepISRQRSYITLLASLQTFLIMAFGATEIIMFYIMFEATLI 128
Cdd:MTH00150 12 SYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKL--RNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 129 PTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQYSQPLQLNSWghmFWWAGCLIAFLVKM 208
Cdd:MTH00150 90 PTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLLVFLAFLVKL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 209 PLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPFIILALWGVIMTGSICLRQTDLKSLIA 288
Cdd:MTH00150 167 PMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 289 YSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANL 368
Cdd:MTH00150 247 YSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINM 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 369 ALPPLPNLMGELMIITTLFNWSPWTILLTGLGTLITAGYSLYMFLMSQRGPTPHHITGLQPFHTREHLLMALHLTPVILL 448
Cdd:MTH00150 327 AAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLL 406
|
410
....*....|.
gi 197935806 449 VTKPELMWGWC 459
Cdd:MTH00150 407 ILKSDLLFMWI 417
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
2.36e-125 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 371.41 E-value: 2.36e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 1 MLKVLIPTIMLFPTIWLSSPKWLwttttTHSLLIASISLTWLKWTSEAGWTSSNTYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWL-----VQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 81 SQNHINPEPISRQRSYITLLasLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00163 76 SESVYKKNNYSNLFLFLILF--LLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 161 LLVALLLLQQSTGTLSMLVLQYSqplqlnSWGHMFWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00163 154 LLVGIFYLYNNSGSLSFFLLNFF------GSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 241 GYGMMRMMVMLDPLSKELAYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAH 320
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGH 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 321 GLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLTGLG 400
Cdd:MTH00163 308 GLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLL 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 197935806 401 TLITAGYSLYMFLMSQRGPTPHHITGLQPFHTREHLLMALHLTPVILLVTKPELMWGW 458
Cdd:MTH00163 388 SFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-458 |
1.75e-120 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 359.44 E-value: 1.75e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 1 MLKVLIPTIMLFPtIWLSSPKWLWTTTTTHSLLIASISLTWLKWTSeAGWTSSNTYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00014 1 MLKLIMPLISLLL-LPLIKYPWSWALTFSTLLLLSLFTLLNLYPMS-APYSMFTESLSSDMLSAPLITLTLWITALMILA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 81 SQNHINPEPISRQrsYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00014 79 SFKIFQNNKAPKT--FMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLP 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 161 LLVALLLLQQSTGTLSMLVLQYSQPLQLNSwghMFWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00014 157 LLMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 241 GYGMMRMMVMLDPLSKELAYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAH 320
Cdd:MTH00014 234 GYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAH 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 321 GLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLTGLG 400
Cdd:MTH00014 314 GLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAIT 393
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 197935806 401 TLITAGYSLYMFLMSQRGPTPHHITGLQPFHTREHLLMALHLTPVILLVTKPELMWGW 458
Cdd:MTH00014 394 SFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNW 451
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
28-454 |
2.07e-112 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 338.49 E-value: 2.07e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 28 TTHSLLIASISLTWLKWTSEAGWTSSNTYLATDPLSTPLLVLTCWLLPLMILASQNHInpEPISRQRSYITLLASLQTFL 107
Cdd:MTH00205 24 FSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVF--KSNKNSKLFTVSVIMLLLIL 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 108 IMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLvlqYSQPLQ 187
Cdd:MTH00205 102 ILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMF---FNFPLN 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 188 LNSWGHMFWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPFIILAL 267
Cdd:MTH00205 179 FSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISL 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 268 WGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILAR 347
Cdd:MTH00205 259 WGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNK 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 348 GLQMIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLTGLGTLITAGYSLYMFLMSQRGPTPHHITGL 427
Cdd:MTH00205 339 GVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSF 418
|
410 420
....*....|....*....|....*..
gi 197935806 428 QPFHTREHLLMALHLTPVILLVTKPEL 454
Cdd:MTH00205 419 LAISEREYYILILHWFPLNILILKLKI 445
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
56-448 |
1.32e-90 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 283.51 E-value: 1.32e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 56 YLATDPLSTPLLVLTCWLLPLMILASQNHINPepisRQRSYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIIT 135
Cdd:COG1008 77 HLGVDGISLPLVLLTALLTPLAILASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 136 RWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQYSQpLQLNSWGHMFWWAGCLIAFLVKMPLYGVHL 215
Cdd:COG1008 153 IWGGE-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAA-APLPLTAQLLLFLAFFIAFAVKVPMFPFHT 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 216 WLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPL-SKELAYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSH 294
Cdd:COG1008 231 WLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSH 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 295 MGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPPLP 374
Cdd:COG1008 311 MGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTS 390
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 197935806 375 NLMGELMIITTLFNWSPWTILLTGLGTLITAGYSLYMFlmsQR---GPTPHHITGLQPFHTREHLLMALHLTPVILL 448
Cdd:COG1008 391 GFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY---QRvffGPLKEELAELPDLNPRELAVLAPLAALILLL 464
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
56-448 |
1.09e-85 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 271.31 E-value: 1.09e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 56 YLATDPLSTPLLVLTCWLLPLMILASQNHINPepisRQRSYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIIT 135
Cdd:PRK05846 77 HLGVDGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 136 RWGnQTERLNAGTYFLFYTLAGSLPL----LVALLLLQQSTGTLSMLVLQYsqpLQLNSWGHMFWWAGCLIAFLVKMPLY 211
Cdd:PRK05846 153 VWG-GKNRIYAATKFFLYTLLGSLLMlvaiIYLVVVYYNATGTFDIADLLN---LPLPPGVQYWLFLAFFIAFAVKMPMF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 212 GVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPL-SKELAYPFIILALWGVIMTGSICLRQTDLKSLIAYS 290
Cdd:PRK05846 229 PLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 291 SVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLAL 370
Cdd:PRK05846 309 SISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGL 388
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 197935806 371 PPLPNLMGELMIITTLFNWSPWTILLTGLGTLITAGYSLYMFLMSQRGPTPHHITGLQPFHTREHLLMALHLTPVILL 448
Cdd:PRK05846 389 PGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVALLLLL 466
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-448 |
3.79e-78 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 251.01 E-value: 3.79e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 57 LATDPLSTPLLVLTCWLLPLMILASQNHINpepiSRQRSYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITR 136
Cdd:TIGR01972 73 LGVDGISLLLVLLTALLTLLAILASWESIQ----KRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 137 WGNQTeRLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQYSQPLqlNSWGHMFWWAGCLIAFLVKMPLYGVHLW 216
Cdd:TIGR01972 149 WGGPN-RIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFDLLELLNLPL--PFGVQTWLFLAFFIAFAVKVPLFPLHTW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 217 LPKAHVEAPVAGSMVLAAVLLKLGGYGMMRM-MVMLDPLSKELAYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHM 295
Cdd:TIGR01972 226 LPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHM 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 296 GLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPPLPN 375
Cdd:TIGR01972 306 GFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSG 385
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 197935806 376 LMGELMIITTLFNWSPWTILLTGLGTLITAGYSLYMFlmsQR----GPTPHHITGLQPFHTREHLLMALHLTPVILL 448
Cdd:TIGR01972 386 FVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY---KRvffgELSNPEVAEFPDLNGREIAVLAPLVVLILFL 459
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
15-412 |
1.19e-73 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 239.57 E-value: 1.19e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 15 IWLSSPKWLWTTTTTHSLLIASI-------SLTWLKWTSEAGWTSSNTYLATDPLSTPLLVLTCWLLPLMILASQNHINp 87
Cdd:MTH00217 27 LKKIALEWSLLTLTATILLWASFdgegqfqAIKKFEWIPGIEPVFGPVVFAVDGISIFFLILTALLTPICILISWNSIK- 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 88 epiSRQRSYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLL 167
Cdd:MTH00217 106 ---FLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFT 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 168 LQQSTGTLSMlvlQYSQPLQLNSWGHMFWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRM 247
Cdd:MTH00217 183 LYSYAGTTDY---QALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRF 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 248 MVMLDPLSKELAYPFI-ILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSA 326
Cdd:MTH00217 260 SWPLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSA 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 327 LFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLTGLGTLITAG 406
Cdd:MTH00217 340 LFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAG 419
|
....*.
gi 197935806 407 YSLYMF 412
Cdd:MTH00217 420 YSIYLY 425
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
53-412 |
1.49e-73 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 239.19 E-value: 1.49e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 53 SNTYLATDPLSTPLLVLTCWLLPLMILASQNHINpepiSRQRSYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLI 132
Cdd:MTH00204 75 GPLVFAVDGVSLFFILLTTLLIPICILISWKSIK----FLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 133 IITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQYSQ-PLQLNSWGhmfwWAGCLIAFLVKMPLY 211
Cdd:MTH00204 151 LIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKlPLSIQKWL----LVGFFLSLAVKIPQI 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 212 GVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPFII-LALWGVIMTGSICLRQTDLKSLIAYS 290
Cdd:MTH00204 227 PFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVmLSVIAVIYGSLTTCRQVDFKRLIAYS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 291 SVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLAL 370
Cdd:MTH00204 307 SVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGF 386
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 197935806 371 PPLPNLMGELMIITTLFNWSPWTILLTGLGTLITAGYSLYMF 412
Cdd:MTH00204 387 PLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-401 |
5.35e-69 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 221.42 E-value: 5.35e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 113 ATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQYSQPLQLNSWG 192
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 193 HMFWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPFIILALWGVIM 272
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 273 TGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLA-NTAYERTHSRTMILARGLQM 351
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 197935806 352 IFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLTGLGT 401
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
57-410 |
1.28e-63 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 214.02 E-value: 1.28e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 57 LATDPLSTPLLVLTCWLLPLMILASQNHINpepiSRQRSYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITR 136
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWHSVK----YLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 137 WGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVL---QYSQPLQLNSWghmfWWAGCLIAFLVKMPLYGV 213
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLascSHVVSEQTQKW----IFLGIFLAMAVKIPIFPF 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 214 HLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPL-SKELAYPFIILALWGVIMTGSICLRQTDLKSLIAYSSV 292
Cdd:MTH00226 250 HIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSV 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 293 SHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPP 372
Cdd:MTH00226 330 AHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPP 409
|
330 340 350
....*....|....*....|....*....|....*...
gi 197935806 373 LPNLMGELMIITTLFNWSPWTILLTGLGTLITAGYSLY 410
Cdd:MTH00226 410 SGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
57-411 |
1.70e-55 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 192.17 E-value: 1.70e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 57 LATDPLSTPLLVLTCWLLPLMILASQNhINPEPisrqRSYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITR 136
Cdd:PRK12561 55 LGVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 137 WGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQQSTG--TLSMLVL---QYSQPLQLnswghmFWWAGCLIAFLVKMPLY 211
Cdd:PRK12561 130 WGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDtfTFDLAELgakSYPLALEL------LLYAGFLIAFGVKLPIF 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 212 GVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMV-MLDPLSKELAYPFIILALWGVIMTGSICLRQTDLKSLIAYS 290
Cdd:PRK12561 203 PLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYS 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 291 SVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLAL 370
Cdd:PRK12561 283 SVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLAL 362
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 197935806 371 PPLPNLMGELMI---ITTLFNWSPW----TILLTGLGTLITAGYSLYM 411
Cdd:PRK12561 363 PGMSGFVSELTVflgITSSDVYSSTfrtiTILLAAVGLILTPIYLLSM 410
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
21-403 |
1.03e-46 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 166.86 E-value: 1.03e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 21 KWLWTTTTTHSLLIASISLTWLKWTSEA------GWTSS-NTYLATDPLSTPLLVLTCWLLPLMILASQNHINPEpiSRQ 93
Cdd:COG0651 29 QRALSLLASLALLALALALLLQVLAGGPlvyalgGWPAPfGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHE--RRG 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 94 RSYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQQSTG 173
Cdd:COG0651 107 RRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATG 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 174 TLSMLVLQYSQPLQLNSWGHMFWWAgCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDP 253
Cdd:COG0651 186 TLNMADLAARLAELDPGLLLAAFAL-LLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFG 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 254 --LSKELAYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLA 331
Cdd:COG0651 265 adPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAA 344
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 197935806 332 NTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPWT----ILLTGLGTLI 403
Cdd:COG0651 345 GAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLlaavLLLSSLLTLA 420
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
106-410 |
2.52e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 159.69 E-value: 2.52e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 106 FLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLllqqstgtLSMLVLQYSQP 185
Cdd:MTH00094 74 ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL--------KNFFFFSLCYF 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 186 LQLNSWGHMFWwagCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELaypFIIL 265
Cdd:MTH00094 146 DFFLSWEMFFI---LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFVYNNF---WIIF 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 266 ALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMIL 345
Cdd:MTH00094 220 SLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYF 299
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 197935806 346 ARGLQMIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLTGLGTLITAGYSLY 410
Cdd:MTH00094 300 MNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLF 364
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
44-455 |
2.82e-43 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 159.49 E-value: 2.82e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 44 WTSEAGWTSSntyLATDPLSTPLLVLTCWLLPLMILASQnhinpePIS-RQRSYITLLASLQTFLIMAFGATEIIMFYIM 122
Cdd:PRK02546 73 WLPQLGLTWS---VGADGLSMPLILLTGFITTLAVLAAW------PVTfKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLA 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 123 FEATLIPTLIIITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLS--MLVL---QYSQPLQLnswghmFWW 197
Cdd:PRK02546 144 WELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTfdMTALaakDFGLGFQL------LCY 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 198 AGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYP-FIILALWGVIMTGSI 276
Cdd:PRK02546 217 AGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLGVVNIIYAALT 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 277 CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHsrTMIL------ARGLQ 350
Cdd:PRK02546 297 SFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTH--TLMLdemggvGQKMR 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 351 MIFPLtamwWFAANLANLALPPLPNLMGELMIITTLFNWSPWT-------ILLTGLGTLITAGYSLYMFLMSQRGPTPHH 423
Cdd:PRK02546 375 KMFAM----WTACSLASLALPGMSGFVAELMVFVGFATSDAYTlpfrvvvVFLAAVGVILTPIYLLSMLREIFFGPENKE 450
|
410 420 430
....*....|....*....|....*....|....*
gi 197935806 424 ITG---LQPFHTREHLLMALHLTPVILLVTKPELM 455
Cdd:PRK02546 451 LVShekLVDAEPREVFIIACLLVPIIGIGLYPKLV 485
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
57-411 |
1.46e-40 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 151.64 E-value: 1.46e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 57 LATDPLSTPLLVLTCWLLPLMILASQnhinpePISRQ-RSYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIIT 135
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 136 RWGNQtERLNAGTYFLFYTLAGSLPLLVALLLL-----QQSTGTLSMLVLQySQPLQLnswgHMFWWAGCLIAFLVKMPL 210
Cdd:CHL00011 154 MWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMglygsNEPTLNFETLANQ-SYPVAL----EILFYIGFLIAYAVKLPI 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 211 YGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPF-IILALWGVIMTGSICLRQTDLKSLIAY 289
Cdd:CHL00011 228 IPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWlVIVGAIQIIYAASTSLGQRNLKKRIAY 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 290 SSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERThsRTMILAR--GLQMIFPLTAMWWFAANLAN 367
Cdd:CHL00011 308 SSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMAS 385
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 197935806 368 LALPPLPNLMGELM----IITTLFNWSPWTILLT---GLGTLITAGYSLYM 411
Cdd:CHL00011 386 LALPGMSGFVAELIvffgIITSQKYLLMPKILITfvmAIGMILTPIYLLSM 436
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
31-411 |
2.11e-40 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 151.39 E-value: 2.11e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 31 SLLIASISLTW--------------LKWTSEAGWTSS---NTYLATDPLSTPLLVLTCWLLPLMILASQnhinpEPISRQ 93
Cdd:PRK06473 32 ALVIASVLLLLslvlafqfdpgnpnQQFTEFIPWIDSlglSYHLGVDGLSLPLLVLNSLLTLIAIYSSD-----ESIQRP 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 94 RSYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQtERLNAGTYFLFYT-LAGSLPLLVALLLLQQST 172
Cdd:PRK06473 107 RFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTaISGILILVSFLGLVWLSG 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 173 GTLSMLVLQYSQPLQLNSwgHMFWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLD 252
Cdd:PRK06473 186 ASSFDYEPLRSHTLPLST--QLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLF 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 253 PLSKELAYPFiiLALWGVI--MTGSIC-LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFC 329
Cdd:PRK06473 264 PEAWVYLAPW--LATWAVVsvLYGASCaIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFL 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 330 LANTAYERTHSRTMILARGL---QMIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLTGLGTLITAG 406
Cdd:PRK06473 342 LVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAV 421
|
....*
gi 197935806 407 YSLYM 411
Cdd:PRK06473 422 YFLLL 426
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-110 |
2.73e-32 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 118.78 E-value: 2.73e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 1 MLKVLIPTIMLFPTIWLSSPKWLWTTTTTHSLLIASISLTWLKWTSEAGWTSSNTYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 197935806 81 SQNHINPEPISRQRSYITLLASLQTFLIMA 110
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
41-407 |
1.48e-27 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 114.81 E-value: 1.48e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 41 WLKWTSEAGWTSSntyLATDPLSTPLLVLTCWLLPLMILASQnhinpEPISRQRSYITLLASLQTFLIMAFGATEIIMFY 120
Cdd:PRK07363 62 YLPWNEPLGLSYS---LGVDGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFF 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 121 IMFEATLIPTLIIITRWGNQtERLNAGTYFLFYT-LAGSLPLLVALLLLQQSTGTLSMLVLQYSQPLQLNSwgHMFWWAG 199
Cdd:PRK07363 134 LFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTaVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNT--QLILLTG 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 200 CLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPfiILALWGVI--MTGS-I 276
Cdd:PRK07363 211 LLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTIsvIYGAlS 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 277 CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMI---F 353
Cdd:PRK07363 289 AIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgL 368
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 197935806 354 PLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLTGLGTLITAGY 407
Cdd:PRK07363 369 PLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY 422
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
201-448 |
2.40e-27 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 114.26 E-value: 2.40e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLD-PLSKELAYP-FIILALWGVIMTGSICL 278
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaAIGSDFPGRlLLIFGLLSVLVAAFFLL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 279 RQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAM 358
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGW 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 359 WWFAANLANLALPPLPNLMGELMIITTLFNWSPWT---ILLTGLGTLITAgyslyMFLMSQRgptphHITGLQPFHTREH 435
Cdd:PRK06458 381 GLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLiaiLLLLLLTLAFAA-----LVRRVAG-----MVFGEPPEAVNRG 450
|
250
....*....|...
gi 197935806 436 LLMALHLTPVILL 448
Cdd:PRK06458 451 DLGWLTTSPMFVH 463
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-407 |
2.53e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 108.04 E-value: 2.53e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 57 LATDPLSTPLLVLTCWLLPLMILASQnhinPEPISRQRSYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITR 136
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAI----GYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAM 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 137 WGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQ----YSQPLQLNSwghmfwwAGCLIAFLVKMPLYG 212
Cdd:PRK08375 149 GGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAgalaENPTVVTAF-------GFVLLALALKAAVFP 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 213 VHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMV----MLDPLSKELAYPFIILALWGVIMTGSICLRQTDLKSLIA 288
Cdd:PRK08375 221 LHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFtvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 289 YSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANL 368
Cdd:PRK08375 301 YSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLI 380
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 197935806 369 ALPPLPNLMGELMIITTLFN-WSPWTILLTGLGTLITAGY 407
Cdd:PRK08375 381 GVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
5-423 |
2.27e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 105.82 E-value: 2.27e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 5 LIPTIMLFPTIWLSSPKWLWTTTTTHSLLIASISLTWLKWTSE------AGWTSS-NTYLATDPLSTPLLVLTCWLLPLM 77
Cdd:PRK12667 19 LLPLLSILLKGNRKIQKIYALLVSLITLILSILLFIQVYSSNKpivylfGGWPAPiGIVYEVDLLGALLGLLTALVMFLI 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 78 ILASQNHInpEPISRQRSYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAG 157
Cdd:PRK12667 99 LIYSYWYL--EHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVG 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 158 SLPLLVALLLLQQSTGTLSMLVL-----QYSQPLQLNSWGHMFWWAG-----CLIAFLVKMPLYGVHLWLPKAHVEAPVA 227
Cdd:PRK12667 177 TTLYFLALAFLYATFGTLNMADLsakirGLSFPLTGGLAGNPPLALGvalalALWAFTIKAAIFPNHFWLPDAHPAAPSP 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 228 GSMVLAAVLLKLGGYGMMRMMVM-------LDPLSKELAYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAG 300
Cdd:PRK12667 257 VSAMLSGLVVNVGAYAIIRFLYTifgispsLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFM 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 301 GILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPPLPNLMGEL 380
Cdd:PRK12667 337 GIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKL 416
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 197935806 381 MIITTLFNWSPWTILLTGL-GTLITAGYSLYMFLMSQRGPTPHH 423
Cdd:PRK12667 417 LLFNALLESGFYLPALVLLiASAISLVGYFRAWYSLFFGKPKSG 460
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-404 |
3.66e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 89.63 E-value: 3.66e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 91 SRQRSYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITrWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQ 170
Cdd:PRK07234 91 AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 171 STGTLSMLVLQYSQPLqlnswghmfwwAGCLIA--FLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMM 248
Cdd:PRK07234 170 ANGTFAFSGLATADPE-----------AFALIAlgLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 249 VMLDPLSKELAYPFIILALWGVImtgsICLRQTDLKSLIAYSSVSHMGLVAGGILIqtpwgfsgAIILMIAHGLVSSALF 328
Cdd:PRK07234 239 LDVPGLDLIVRIFGVGTALLGVL----FALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLF 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 329 CLANTAYERTHS--RTMILARGLQMifPLTamwwfaanLANLALPPLPNLMG---ELMIITTLFNWSPWTILLTGLGTLI 403
Cdd:PRK07234 307 LCAGALPSRNFTelISQMLGIGKWI--PLT--------MASFSIAGFPLLAGfvsKVLTLKNLLPWQAIALNLAAVGTAA 376
|
.
gi 197935806 404 T 404
Cdd:PRK07234 377 S 377
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
201-432 |
4.99e-19 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 89.43 E-value: 4.99e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPFIILALwGVIMTGSIC--- 277
Cdd:PRK08676 213 FIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsm 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 278 LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTA 357
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAA 371
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 197935806 358 MWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLTgLGTLITAGYSLYMFLMSQRGPTPHHITGLQPFHT 432
Cdd:PRK08676 372 WGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAV-LLLLLLAASSFAIFLLKAFTRVSEGNADRPVFRT 445
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
57-387 |
2.03e-17 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 84.78 E-value: 2.03e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 57 LATDPLSTPLLVLTCWLLPLMILASQNHINPEPISRQRSYITLLASLQTF-LIMAFGATEIIMFYIMFEATLIPTLIIIT 135
Cdd:PRK08667 73 FHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMALSSFFLVM 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 136 RWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQYSQPLQLNSWGHMFwwagclIAFLVKMPLYGVHL 215
Cdd:PRK08667 153 NDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFLLLF------LGFGIKAGIIPFHK 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 216 WLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRmmVMLDPLSKELAYPFIIL------ALWGVIMTgsicLRQTDLKSLIAY 289
Cdd:PRK08667 227 WLPYAHPASPSNVSALMSGVMLKVAVYGLVR--FLMDVLSPELWWGVLILlagsisALLGVIYA----LKEHDLKGLLAY 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 290 SSVSHMGLVAGGILIQTPWGFSG-----------AIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAM 358
Cdd:PRK08667 301 SSIENIGIILMGIGLYVIFGVYGldtlallalggALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSA 380
|
330 340
....*....|....*....|....*....
gi 197935806 359 WWFAANLANLALPPLPNLMGELMIITTLF 387
Cdd:PRK08667 381 LFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
92-453 |
3.99e-17 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 83.46 E-value: 3.99e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 92 RQRSYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITrWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQS 171
Cdd:PRK12663 106 RRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGT 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 172 TGTLSMLVLQysqpLQLNSWGH----MFWWAGCLIAFLVKMPLYGVHlWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRM 247
Cdd:PRK12663 185 FGTLNMAHIA----MRLNDMGDtatlTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRV 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 248 MVMLDPLSKELAYPFIILALWGVIMTGSI-CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSA 326
Cdd:PRK12663 260 FTLLFPQERELLHPLLATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTA 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 327 LFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLTGLGTLITAG 406
Cdd:PRK12663 340 LFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITM 419
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 197935806 407 YSLY-MFLMSQRGPTPHHITGLQPFHTREHLLMALHLTPVILLVTKPE 453
Cdd:PRK12663 420 YSLFrIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILAVVVIAMGIAAE 467
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
105-410 |
2.85e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 81.17 E-value: 2.85e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 105 TFLI------MAFGATEIIMFYIMFEATLIPTLIIITRwGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSML 178
Cdd:PRK12665 116 TYLIlvagvsNAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 179 vlQYSQPLQ-LNSWGHMFWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPlSKE 257
Cdd:PRK12665 195 --DLAVRLDeLPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGG 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 258 LAYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYER 337
Cdd:PRK12665 272 LDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQ 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 197935806 338 THSRTMILARGLQMIFPLTAMWWF--AANLAnlALPPLPNLMGELMIITT-LFNWSPWTILLTGlGTLITAGYSLY 410
Cdd:PRK12665 352 AGSSSLRRLGGLAKASPLLAVLFFvpALNLG--GIPPFSGFIGKVALLEAgAEDGTWLAWALVA-GGVVTSLLTLY 424
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
73-386 |
2.52e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 78.11 E-value: 2.52e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 73 LLPLMILASQNHINPEPISRQRSYITLLASLQ-TFLIMAFGATEIIMFYIMFEATLIPTLIIITRwGNQTERLNAGTYFL 151
Cdd:PRK08668 76 MISLLVIFSVAFFMVSEKTKNDAYFNMFALMSlAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFV 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 152 FYTLaGSLPLLVALLLLQQSTGTLSMLVLqySQPLQLNSWGHMFWWAGCLI--AFLVKMPLYGVHLWLPKAHVEAPVAGS 229
Cdd:PRK08668 155 LSAI-GAYAMLYAIFLIYAKTGTFDFADI--SQGLINDTSTGFALIVFLFLlaFGVAKAGIFPLHVWAPDAYSEAPQSFS 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 230 MVLAAVLLKLGGYGMMRMMVMLdPLSK------------ELAYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGL 297
Cdd:PRK08668 232 AVLSGQLSKLGAYGFLLVLYVL-PGTKlfsefgtyrgvpLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 298 VAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPPLPNLM 377
Cdd:PRK08668 311 ILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFA 390
|
....*....
gi 197935806 378 GELMIITTL 386
Cdd:PRK08668 391 SKWLIFEAL 399
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-402 |
5.71e-14 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 74.19 E-value: 5.71e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 214 HLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRMmvmlDPLSKELAYPFIILALWGV---IMTGSICLRQTDLKSLIAY 289
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARL----NPVLGGTPLWQTILPLFGGltmLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 290 SSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLA 369
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
170 180 190
....*....|....*....|....*....|...
gi 197935806 370 LPPLPNLMGELMIITTLFNWSPWTILLTGLGTL 402
Cdd:PRK12647 370 LPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
91-409 |
3.39e-13 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 72.00 E-value: 3.39e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 91 SRQRSYITLLASLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTyfLFYTLAGSLPLLVALLLLQQ 170
Cdd:PRK12650 107 KGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAAT 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 171 STGTLSMlvlqySQPLQLNSWGHMFWWAGcLIAFLVKMPLYG------VHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGM 244
Cdd:PRK12650 185 QTGTTSL-----SGILHSDVWAEKPGLTT-VVAVLIAVAAFTksaqfpFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLL 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 245 MRmmvmLDPLSKELA---YPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHG 321
Cdd:PRK12650 259 LR----FSPVFHDVAvwnWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHA 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 322 LVSSALFCLANTAYERTHSRTM--ILARGLQMIFPLTAMWWFAANLAnlALPPLPNL-----MGELMIITTLFNWSPWTI 394
Cdd:PRK12650 335 LFKSSLFMLIGVVDHQAGTRDIrrLGSLWRRMPFTFVSVTIAALSMA--AVPPLFGFvskegMLTAFLEAPGGNAGVVLL 412
|
330
....*....|....*.
gi 197935806 395 LLT-GLGTLITAGYSL 409
Cdd:PRK12650 413 LVGaALGAVFTFAYSA 428
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
201-407 |
8.82e-13 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 70.18 E-value: 8.82e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLS--KELAYPFIILALWGVIMTGSICL 278
Cdd:PRK08377 213 IFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAELSAL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 279 RQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAM 358
Cdd:PRK08377 293 RQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTAL 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 197935806 359 WWFAANLANLALPPLPNLMGELMIITTLFNWS-PWTILLTGLGTLITAGY 407
Cdd:PRK08377 373 ALTIGALSTVGIPLFNVFWSKFRIILAGLSAGyTWPVALVLGASVVEAVY 422
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
214-424 |
5.03e-12 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 67.87 E-value: 5.03e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 214 HLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRMMVMLDpLSKELAYPFIILALWGVIMTGSICLRQTDLKSLIAYSSV 292
Cdd:COG1009 231 HFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFA-LSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTV 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 293 SHMGLVAGGILIQtpwGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPP 372
Cdd:COG1009 309 SQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPP 385
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 197935806 373 LPNLMGELMIITTLFNWSPWTILLTGLGTL---ITAGYSLYMFLM----SQRGPTPHHI 424
Cdd:COG1009 386 FAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLvffgKPRPKTPKHP 444
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
198-402 |
1.05e-11 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 66.54 E-value: 1.05e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 198 AGCLIAFLVKMPLYGVHLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRMMVMLDPLSKELAYPFIILALWGVIMTGSI 276
Cdd:PRK06525 211 LGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLM 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 277 CLRQTDLKSLIAYSSVSHMGLVAGGILIQ---TPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIF 353
Cdd:PRK06525 290 YLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKL 369
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 197935806 354 PLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLTGLGTL 402
Cdd:PRK06525 370 PLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
9-460 |
5.40e-11 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 64.37 E-value: 5.40e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 9 IMLFPTIWLSSPKWLWTTTTTHSLLIASISLTWLKWTSEAGWTSSNTYLAtDPLSTPLLVLTCWLLPLMILASQNHINPE 88
Cdd:COG1007 19 VLLLLDLFLPRRSRRLLAGLALLGLLLALALLLLALGGGTGTAFGGMFVV-DGFALFFKLLILLAALLVLLLSRDYLERR 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 89 PISRQRSYITLLASLQTFLIMAfGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGT-YFLFYTLA----------- 156
Cdd:COG1007 98 GLLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSsgfllygisll 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 157 -GSlpllvallllqqsTGTLSMLVLqySQPLQLNSWGHMFWWAGC---LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVL 232
Cdd:COG1007 177 yGA-------------TGSLNLAGI--AAALAAGGANSPLLLLGLvlvLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 233 AAVLlKLGGYGM-MRMMVM-LDPLSKELAYPFIILALwgVIMT-GSIC-LRQTDLKSLIAYSSVSHMGLVAGGILIQTPW 308
Cdd:COG1007 242 ATAP-KIAAFAAlLRLLVEaFPGLAADWQLLLAVLAV--LSMTvGNLAaLAQTNVKRMLAYSSIAHAGYLLLGLAAGTPL 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 309 GFSGAIILMIAHGLVSSALF-CLANTAYERTHSRTMILARGLQMIFPLTAmWWFAANLANLA-LPPLPNLMGELMIITTL 386
Cdd:COG1007 319 GVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLA-LAMTIFLLSLAgIPPTAGFFGKFYVFSAA 397
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 197935806 387 FNWSPWTILLTG-LGTLITAGYSL----YMFLmsqRGPTPHHITGLQPFHTrehLLMALHLTPVILLVTKPELMWGWCY 460
Cdd:COG1007 398 VEAGLYWLAVIAvLNSVISAYYYLrvvkAMYF---DEPEEEAPISAPPGLR---VALVIAALLVLLLGIFPGPLLDLAA 470
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-402 |
1.04e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 63.43 E-value: 1.04e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPFI-ILALWGVIMtGSI-CL 278
Cdd:PRK07691 216 LFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLIlILALLTIIF-GVIgAV 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 279 RQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAM 358
Cdd:PRK07691 295 AYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGW 374
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 197935806 359 WWFAANLANLALPPLPNLMGELMIITTLFN----WSPWTILLTGLGTL 402
Cdd:PRK07691 375 MFFIAALSLAGIPPLSGFYGKFFIVEGTFEagfyVSGIIVLLSSLLVL 422
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-404 |
2.11e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 62.81 E-value: 2.11e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 119 FYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQYSqpLQLNSWG-HMFWW 197
Cdd:PRK08376 146 FFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVK--MSENPTVvAKIAL 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 198 AGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLaaVLLKLGG-YGMMRMMVMLDPLS---KELAYPFIILALWGVIMT 273
Cdd:PRK08376 224 ALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAinlATVGWVIIILGCLTMFVG 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 274 GSICLRQTDLKSLIAYSSVSHMG---------LVAGGILIQTPWGF---SGAIILMIAHGLVSSALFCLANTAYERTHSR 341
Cdd:PRK08376 302 VAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEialAGGIYHIVNHALYKALLFLTAGAVIYETGTR 381
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 197935806 342 TMILARGLQMIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLTGLGTLIT 404
Cdd:PRK08376 382 NLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLT 444
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-414 |
3.44e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 61.76 E-value: 3.44e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAY-----PFIILALWGVIMTGS 275
Cdd:PRK06589 217 FIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIfaefnWLIFIPIVSIFYSSL 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 276 ICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPL 355
Cdd:PRK06589 297 KALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPL 376
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 197935806 356 TAMWWFAANLANLALPPLPNLMGELMIITTLFNWS-PWT-ILLTGLGTLITAGYSLYMFLM 414
Cdd:PRK06589 377 ISFIISISSLSLIGIPIFSGFISKFLILLAASEQNqPWLsIIVMLVVIASSILSALYLLKI 437
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
113-411 |
3.93e-10 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 62.08 E-value: 3.93e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 113 ATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSML-VLQYSQPLQLNSW 191
Cdd:PRK12646 129 SDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeILGQADHIKNHGL 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 192 gHMFWWAGCLIAFLVKMPLYGVHLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRMMVMLDpLSKELAYPFIILALWGV 270
Cdd:PRK12646 209 -FIPMIFMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG-LSNMYIYIVTFVGLITM 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 271 IMTGSICLRQTDLKSLIAYSSVSHMGLVA-----GGILIQTPWG----------FSGAIILMiAHGLVSSALFCLANTAY 335
Cdd:PRK12646 286 LFGSITALKQWDLKGILAYSTISQLGMIMamvgiGGGYAQHQQDaiasiyvfvlFAALFHLM-NHAIFKCALFMGVGIID 364
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 336 ERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSP-------WTILLTGLG---TLITA 405
Cdd:PRK12646 365 HEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQlsqfsliSMIIIVFIGviaSIFTF 444
|
....*.
gi 197935806 406 GYSLYM 411
Cdd:PRK12646 445 TYALYM 450
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
170-409 |
1.19e-09 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 60.23 E-value: 1.19e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 170 QSTGTLSMLVLqySQPLQLNSWGHMFWWAGcLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMV 249
Cdd:PRK08042 159 QRYGTLDLRLL--DMRMQQLPLGSDIWLLG-VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSL 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 250 MLDPLSKELAYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLV-----AG--GILIQTP----WGFSGAIILMI 318
Cdd:PRK08042 236 LGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgAGvtGIALEQPaliaLGLVGGLYHLL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 319 AHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLTG 398
Cdd:PRK08042 316 NHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVAR 395
|
250
....*....|..
gi 197935806 399 -LGTLITAGYSL 409
Cdd:PRK08042 396 lLGPLLAVGLAI 407
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
208-373 |
3.65e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 59.13 E-value: 3.65e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 208 MPLygvHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRmmVMLDPL-SKELAYPFIILALWGVIMTGSI--CLRQTDLK 284
Cdd:PRK06521 227 VPL---HVWLPRAHPAAPSHVSALMSGVMLKVAIYGILR--VVFDLLgAPGWWWGVLVLALGAISAVLGVlyALAEHDLK 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 285 SLIAYSSVSHMGLV-----------AGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIF 353
Cdd:PRK06521 302 RLLAYSTIENIGIIfvglglamvfiAYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRM 381
|
170 180
....*....|....*....|
gi 197935806 354 PLTAMWWFAANLANLALPPL 373
Cdd:PRK06521 382 PWTAWAFLIGCLAISALPPL 401
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-331 |
5.31e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 58.21 E-value: 5.31e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMM-----VMLDPLSKELAYPFIILALWGVIMTGS 275
Cdd:PRK12662 216 MVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkANFVFTTLPFNNVFMILAALAIVFGSV 295
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 197935806 276 ICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLA 331
Cdd:PRK12662 296 LAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVS 351
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
94-424 |
7.88e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 57.92 E-value: 7.88e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 94 RSYITLLASLQTFLIMAFGATEIIMFyIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTG 173
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 174 TLSMLVLQYSQPLQLNSWGHMFWWAGCLIAFL------VKMPLYgvhLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMR 246
Cdd:PRK12649 191 TYDIATILQDSELIENIKGHPLFLITLILIFIgaaaksAQGPFY---IWLPNA-MEAPTPVSAFLhSATMVKAGVYLVAR 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 247 MmvmlDPLSKELAYPFIILALWGVI---MTGSICLRQTDLKSLIAYSSVS---HMGLVAGGILIQTP-WGFSGAIILMIA 319
Cdd:PRK12649 267 I----HPIFSGTEAWFILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISqlaYLMTMYGYTTYHEPgLGVAAATFHLLN 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 320 HGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWS-----PWTI 394
Cdd:PRK12649 343 HATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYETSVEMGaliggPFTI 422
|
330 340 350
....*....|....*....|....*....|....*...
gi 197935806 395 LLTG---LGTLITAGYSLYM----FLMSQ-RGPTPHHI 424
Cdd:PRK12649 423 IIPAvavLGGVFTFAYSIKLidgiFLGERtHDHLPHHI 460
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-403 |
2.81e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 56.01 E-value: 2.81e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 201 LIAFLVKMPLYGVHLWLPKAHVEA--PVAGsmvLAAVLLKLGGYGMMRM-MVMLDPLSKELAYPFIILALWGVIMT---G 274
Cdd:PRK12666 217 LVVFLIKAAMWPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLsTLLFGPEAGASAGFGQDWLLPGGLATlafG 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 275 SI-CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLAN-----------------TAYE 336
Cdd:PRK12666 294 AIgVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADlverqrgaaadrlavtpELYD 373
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 197935806 337 RTHSRTMILARGLQMIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFN----WSPW----TILLTGLGTLI 403
Cdd:PRK12666 374 LDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLNppgaGAAWwlwaLVLLSGLAALI 448
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
106-345 |
1.13e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 53.77 E-value: 1.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 106 FLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQYSqp 185
Cdd:MTH00062 83 FSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSD-- 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 186 lqlNSWGHMFWWAGCLIaFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKeLAYPFIIL 265
Cdd:MTH00062 161 ---DSVSLIVYYVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF-LGYLFLCC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 266 ALWGVIMTGSicLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMIL 345
Cdd:MTH00062 236 LFSVFFLITA--CSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVL 313
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
263-383 |
2.38e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 53.11 E-value: 2.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 263 IILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRT 342
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 197935806 343 MILARGLQMIFPLTAMWWFAANLANLALPPLPNLMGELMII 383
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLA 390
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
201-328 |
5.03e-07 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 51.75 E-value: 5.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLlKLGGYGM-MRMMVM-LDPLSKELAYPFIILALWGVIMTGSICL 278
Cdd:PRK05777 211 LVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLLVVaFGGLSEDWQQVLAIIAIASMLVGNLAAL 289
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 197935806 279 RQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALF 328
Cdd:PRK05777 290 SQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
96-456 |
3.07e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 49.56 E-value: 3.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 96 YITLLASLQTFLIMAFgATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTL 175
Cdd:TIGR01770 105 YILLLFALLGIFLLVS-SNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 176 SMLVL-QYSQPLQLNSWGHMFWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMV-MLDP 253
Cdd:TIGR01770 184 NFEDLlLFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLyILFG 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 254 LSKELAYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALF-CLAN 332
Cdd:TIGR01770 264 FSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgVLSL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 333 T-AYERTHSRTMILARGLQMIFPLTAMwWFAANLANLA-LPPLPNLMGELMIITTLFNWSPWTI-LLTGLGTLITAGYSL 409
Cdd:TIGR01770 344 LrSYKDEWIEYISDFAGLFKTNPILAI-LILIFMFSLAgIPPLAGFFGKFYVFFALLKSGLYWLaVIAVLTSVIGAFYYL 422
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 197935806 410 ----YMFLmsqrgPTPHHITGLQPFHTREHLLMALHLTPVILLVTKPELMW 456
Cdd:TIGR01770 423 rvvkVMYF-----DKPERRIPSNPQSKAQSLLLSISALFILFLGLFPSLIL 468
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
197-414 |
3.11e-06 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 49.64 E-value: 3.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 197 WAGCLIAFLVKM---------PLygvHLWLPKAhVEAPV-------AGSMVLAAVLLklggygMMRMmvmlDPLSKELAY 260
Cdd:PRK07376 224 WLALLLCILVFLgpmaksaqfPL---HVWLPDA-MEGPTpisalihAATMVAAGVFL------VARM----YPVFEQFPA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 261 PFIILALWGVI---MTGSICLRQTDLKSLIAYSSVSHMG--LVAGGIliqtpWGFSGAIILMIAHGLVSSALFCLANT-- 333
Cdd:PRK07376 290 VMTVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGymVMAMGC-----GAYSAGLFHLMTHAYFKAMLFLGSGSvi 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 334 -------AYERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPwtiLLTGLGTLiTAG 406
Cdd:PRK07376 365 hgmeevvGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANP---ALWFVGFL-TAG 440
|
....*....
gi 197935806 407 YS-LYMFLM 414
Cdd:PRK07376 441 MTaFYMFRM 449
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
201-450 |
5.15e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 49.15 E-value: 5.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 201 LIAFLVKMPLYGVHLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRMMvmldPLSKELA---YPFIILALWGVIMTGSI 276
Cdd:PRK12644 210 LVGALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLA----PGFADVPvwrPTVLVLGLATMLLGGWR 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 277 CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLT 356
Cdd:PRK12644 285 ALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVL 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 357 AMWWFAANLANLALPPLPNLMGELMIITTLFN------WSPWTILLTGLGTLITAGYSL-YMFLMSQRGPTPHHITGLQP 429
Cdd:PRK12644 365 AVVAALAAASMAGLPPLLGFVAKEAALEAVLHdgalgpAGPVVLAGIVLGSILTVAYSLrFLWGAFARKPGAFPSVAVTE 444
|
250 260
....*....|....*....|.
gi 197935806 430 FHTREHLLMAlhlTPVILLVT 450
Cdd:PRK12644 445 MHRPSPLFLA---PPAVLAVL 462
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
201-415 |
1.55e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 46.80 E-value: 1.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLlKLGgygMMRMMVMLDPLSkELAYPFIILALWGVIMTGSICLRQ 280
Cdd:MTH00144 91 LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVA---PLFLLSNFLDLY-WLAYLLCVISVLSALVGSIGGLNQ 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 281 TDLKSLIAYSSVSHMGLVAGGILiqtpWGFSGAIILMIAHGLVSSALFCLANtaYERTHSRTMILARGLQMIFPLTAMWW 360
Cdd:MTH00144 166 TQVRALLAYSSISHTGWMLVAIL----HGSWLMWMYFLIYIVSSGFLFFSLW--SGDSGSMKDLGSLKPSYKTGLSIISL 239
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 197935806 361 FaanLANLALPPLPNLMGELMIITTLFNWSPW-TILLTGLGTLITAGYSLYMFLMS 415
Cdd:MTH00144 240 L---LSLGGLPPFLGFCSKLLVLISSMESSPLlLILLLLLGSLISLFFYLSVFFSS 292
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
172-387 |
1.32e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 41.31 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 172 TGTLSMLVLQYSQPLQLNSWGhmfwwagcliaFLVKMPLYGVHL--WLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRmMV 249
Cdd:PRK06459 147 SGTTNFSYLPSPVPLILASFG-----------FIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILK-MT 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 250 MLDPLSKELAYPFIILALWGV-IMTGSICLRQTD-LKSLIAYSSVSHMG--LVAGGILIQTPWGFS--------GAIILM 317
Cdd:PRK06459 215 ILTQTIPIGYFGLTILAIGAFsILFGALYAYVSEnVKGLLAFSTIENNGaiLVALGLYMVTKQLITsiehfsliTVILYS 294
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 318 IAHGLVSSALFCLANTAYERTHSRTMILARGLQMIfpltAMWWFAANLAnlALPPLPNLMGELMIITTLF 387
Cdd:PRK06459 295 FAHSVAKTGLFLSSGLQEKQSITYSKKIRNRWIEL----GLTLLASSLS--GLLPNIGGVASWLLLESLF 358
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
57-383 |
1.32e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 41.10 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 57 LATDPLSTPLLVLTCWLLPLMILASQNHINPEP-ISRQRSYITLLaslqTFLIMAFGATE-IIMFYIMFEATLIPTLIII 134
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYLSLF----TFLMMVLVTSDnYLQLFIGWEGVGVCSYLLV 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 135 TRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVLQ-------------YSQPLQLNSWGHmfwWAGCL 201
Cdd:MTH00032 152 AFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsvgsgimdrgyYGGGAYESPLAP---FAIIG 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 202 IAFLV----KMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMvmldPLSKELAYPFIILALWGVI---MTG 274
Cdd:MTH00032 229 ILLLIgcigKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 275 SICLRQTDLKSLIAYSSVSHMGLVAggILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTH--SRTMILARGLQMI 352
Cdd:MTH00032 305 TVGLVQNDLKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvdEQDMRKMGGLIHS 382
|
330 340 350
....*....|....*....|....*....|.
gi 197935806 353 FPLTAMWWFAANLANLALPPLPNLMGELMII 383
Cdd:MTH00032 383 IPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
212-302 |
3.31e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 40.06 E-value: 3.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 212 GVHLWLPKAhVEAPV-------AGSMVLAAVLLklggygMMRMMVMLDPLSKELAYPFIILALwGVIMTGSICLRQTDLK 284
Cdd:MTH00020 228 GLHTWLPDA-MEGPTpvsalihAATMVTAGVFL------LIRSSPLFEQAPLALIIVTIVGSL-TVFFAATVGLVQNDLK 299
|
90 100
....*....|....*....|
gi 197935806 285 SLIAYSSVSHMG--LVAGGI 302
Cdd:MTH00020 300 KVIAYSTCSQLGymVVACGL 319
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
198-427 |
4.08e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 39.68 E-value: 4.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 198 AGCLIAF--LVKMPLYGVHLWLPKAhVEAPVAGSMVLAAVLLKLGGYGMMRMMvmldPLSKELAYPFIILALWGVIMT-- 273
Cdd:PRK08168 202 AALLLVLavILKTAQLPVHGWLIQV-MEAPTPVSALLHAGVVNLGGFVLIRFA----PLLEQAPPARWLLVLVGLATAvl 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 274 -GSICLRQTDLKSLIAYSSVSHMGLvaggILIQTPWG-FSGAIILMIAHGLVSSALFCLANTAYERTHSRTM-------- 343
Cdd:PRK08168 277 aGLVMLTRISIKVRLAWSTVAQMGF----MLLECGLGlYELALLHLVAHSLYKAHAFLSASEAVRDTRLRRLqgpqsaag 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 344 ---ILARGLQMIFPLTA--MWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLTGLGTLI--TAGYSLYMFLMSQ 416
Cdd:PRK08168 353 vvsLLLAPLLSAALVLLlqSLLPLGAWPWWWSAVLALAWAPLLWQPCASGASTLSGLGLGLLLVAglTALAFLAHLLPLG 432
|
250
....*....|.
gi 197935806 417 RGPTPHHITGL 427
Cdd:PRK08168 433 LADAPGPALGL 443
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
214-392 |
5.00e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 39.12 E-value: 5.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 214 HLWLPKAhVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDpLSKELAYPFIILALWGVIMTGSICLRQTDLKSLIAYSSVS 293
Cdd:PRK07390 241 HLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQPVLA-LSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSA 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 294 HMGLVAGGILIQTPwgfSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAMWWFAANLANLALPPL 373
Cdd:PRK07390 319 YLGLVFIAVGLQQP---DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPL 395
|
170
....*....|....*....
gi 197935806 374 PNLMGELMIITTLFNWSPW 392
Cdd:PRK07390 396 GGFWALLRLADGLWAVSPW 414
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
216-411 |
5.01e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 39.24 E-value: 5.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 216 WLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYPFIILALwGVIMTGSICLRQTDLKSLIAYSSVSHM 295
Cdd:MTH00209 197 WLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSL-TTLMASMSANVESDLKKIIALSTLSQL 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 296 GLVAGGILIQTPwgfSGAIILMIAHGLVSSALF-CLANTAYERTHSRTMILARGLQMIFPLTAMwwfAANLANLALPPLP 374
Cdd:MTH00209 276 GLMMCSLGLNQP---ELAFFHLITHALFKALLFiCAGNIIHSHGHSQDIRMVGNLWYQMPITSI---CLNIANLSLCGIP 349
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 197935806 375 NLMG---ELMIITTLF--NWSPWTILLTGLGTLITAGYSLYM 411
Cdd:MTH00209 350 FLAGfysKDLILESMLesNMPIMTLILMFLSTSLTAAYSMRL 391
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
265-397 |
7.30e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 38.22 E-value: 7.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 265 LALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLvaggILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMI 344
Cdd:MTH00011 153 MAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGW----MTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSK 228
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 197935806 345 LARglqmIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLT 397
Cdd:MTH00011 229 ISS----MSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLV 277
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
112-406 |
7.75e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 38.47 E-value: 7.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 112 GATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAG-TYFLFYTLAgSLPLLVALLLLQQSTGTLSMLVLQYSQPLQLNS 190
Cdd:MTH00196 11 SSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGlKYFVLGALS-SGLFLFGCALLCGTTGGLHLSYINLVLNSGQSF 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 191 WGHMFWWAGCLI--AFLVKMPLYGVHLWLPKAHVEAPVAgSMVLAAVLLKLGGYGMMrmmvmldpLSKELAYPFIILALW 268
Cdd:MTH00196 90 SSVSVPIGYLLIivALLFKLSVAPFHMWAPDVYEGAPTK-TTALLAIVPKLGIFSIL--------VSIGLNVNILLIGGL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 269 GVIMTGSI-CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAyeRTHSRTMILAR 347
Cdd:MTH00196 161 FSLFVGAIgALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIILAL--NVYKNLIIEFS 238
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 197935806 348 GLQMIFPLTAMWWFAANLANLALPPLPNLMGELMIITTLFNWSPWTILLTGLGTLITAG 406
Cdd:MTH00196 239 GLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAG 297
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
214-298 |
9.33e-03 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 38.37 E-value: 9.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197935806 214 HLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRMMvmldPLSKELAYPFIILALWGVIMT--GSI-CLRQTDLKSLIAY 289
Cdd:PRK12645 230 YIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVARFT----PIFAGSQVWFWTVTLVGLITLfwGSLnAVKQTDLKGILAF 304
|
....*....
gi 197935806 290 SSVSHMGLV 298
Cdd:PRK12645 305 STVSQLGLI 313
|
|
| |
