|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
1-635 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 665.17 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 1 MYLLIVVLPLVGTLATGLGGRWLGRKGANVFSTVCVFMCLFFSLIAFFEVGLCGVPCYMSVGTWISSGALKISWGFLFDS 80
Cdd:MTH00210 1 MYILVLFLPLLSAIISGLFGRKIGTKGAGILTSSCIVISAIVSCCIFYETTLNGSATYIKLWRWFDSELLTTYFGLQFDS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 81 LTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLCA 160
Cdd:MTH00210 81 LTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 161 NQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYELVFSLASLYKDYNVhflgfsinfLTLIGFFLLIGAVGKSAQLGLH 240
Cdd:MTH00210 161 NKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKES---------LTIICLLLFIGAVGKSAQLGLH 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 241 TWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYSTCSQL 320
Cdd:MTH00210 232 TWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQL 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 321 GYMVFACGLSYYNISMFHLVNHAFFKALLFLSAGSVIHALSNEQDMRRMGSLATNLPITYSAMLIGSLSLAGFPFLTGFY 400
Cdd:MTH00210 312 GYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFY 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 401 SKDLIIEITQISYYSnlqinfgVFACWLANISVFFTSFYTFRLLFLTFIKNSNNYRKHMDNVHESSLLILLPLILLGIAS 480
Cdd:MTH00210 392 SKDLILELTYDKYYI-------AFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGVHESSWNITFPLLLLAFGS 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 481 IFVGFFTKDLFVGigtpfwknaiNILPSscslleveFMSHLIKWLPFILSVFGAIFAYTI---NVGWLKNNIKFAYMYMF 557
Cdd:MTH00210 465 IFVGYLGKEVVLS----------NVIPP--------IVPNSIKMIPLLFSLLGALLAFVIynsMVFLIKISRRGVSIRLY 526
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 385153535 558 RKLAFLLSKKIYWDKLYNSIIVSSLMNFGYTISFKNIDRGFIELLGPYGISRIIKNWSMKIIRIQTGQVTHYTFFVVF 635
Cdd:MTH00210 527 HVIYTFLNSAWQFNYVINHFIVKNIWKFGHLITYRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYALIMII 604
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-636 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 638.36 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 1 MYLLIVVLPLVGTLATGLGGRWLGRKGANVFSTVCVFMCLFFSLIAFFEV-GLCGVPCYMSVGTWISSGALKISWGFLFD 79
Cdd:PRK06590 4 LLWLIVLLPLIGALILGLFGRRIGEKWAHLVGTGLVGLSALLSLVVFFDFlLGGGRAFSQTLWTWISVGDFDVDFGLRVD 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 80 SLTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLC 159
Cdd:PRK06590 84 GLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPS 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 160 ANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYELVFSLAslykdynVHFLGFSINFLTLIGFFLLIGAVGKSAQLGL 239
Cdd:PRK06590 164 AGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVFAAA-------PQFFGLGWSALTLICLLLFIGAMGKSAQFPL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 240 HTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYSTCSQ 319
Cdd:PRK06590 237 HTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQ 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 320 LGYMVFACGLSYYNISMFHLVNHAFFKALLFLSAGSVIHALSNEQDMRRMGSLATNLPITYSAMLIGSLSLAGFPFLTGF 399
Cdd:PRK06590 317 LGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGF 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 400 YSKDLIIEITQISYysnlqinfGVFACWLANISVFFTSFYTFRLLFLTFiknSNNYRKHMDNVHESSLLILLPLILLGIA 479
Cdd:PRK06590 397 FSKDEILEAAFANG--------HINLFVAGLVGAFLTAFYSFRLIFLVF---HGKEKEKIHHPHESPAVMTLPLIVLAVL 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 480 SIFVGFFTKDLFVGigtpfwknainILPSSCSLLEVEFMSHL---IKWLPFILSVFGAIFAYT--INVGWLKNNIKFAym 554
Cdd:PRK06590 466 SVFAGALIVPPFLG-----------VLPLTTELAHGEAEHHLpvwVALLPLVVALAGIALAWLlyLKKPTLPTSIAAP-- 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 555 ymFRKLAFLLSKKIYWDKLYNSIIVSSLMNFGYTIsFKNIDRGFIELLGPyGISRIIKNWSMKIIRIQTGQVTHYTFFVV 634
Cdd:PRK06590 533 --GRFLYTLLRNKYYFDELYEKVFVKPGLALARLL-WKDGDDGIIDGLVP-NSARLVGGGSRVLRRLQTGYLRHYAASML 608
|
..
gi 385153535 635 FG 636
Cdd:PRK06590 609 IG 610
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
1-636 |
0e+00 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 623.25 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 1 MYLLIVVLPLVGTLATGLGGRWLGRKGANVFSTVCVFMCLFFSLIAFFEVGLCGVPCYMSVGTWISSGALKISWGFLFDS 80
Cdd:MTH00020 1 MYLLVLFLPLLGALLSGLFGRKIGEKGAGILTSSCLIISLSWSFLIFYEILFNSSTTYIKLWRWLDSDLLTVYFGLQFDG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 81 LTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLCA 160
Cdd:MTH00020 81 LVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 161 NQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYELVFSLASLYKDYNvhflgfsinfLTLIGFFLLIGAVGKSAQLGLH 240
Cdd:MTH00020 161 NKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVVSAPSSD----------ITLICLFLFIGAVGKSAQLGLH 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 241 TWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYSTCSQL 320
Cdd:MTH00020 231 TWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 321 GYMVFACGLSYYNISMFHLVNHAFFKALLFLSAGSVIHALSNEQDMRRMGSLATNLPITYSAMLIGSLSLAGFPFLTGFY 400
Cdd:MTH00020 311 GYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFY 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 401 SKDLIIEITQISYYSnlqinfgVFACWLANISVFFTSFYTFRLLFLTFIKNSNNYRKHMDNVHESSLLILLPLILLGIAS 480
Cdd:MTH00020 391 SKDLILELAFGQYYL-------IFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLKKAVFFHLHEGDWNLLLPLGILALGS 463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 481 IFVGFFTKDLFVGIGTpfwkNAINILPSScsllevefmshlIKWLPFILSVFGAIFAYTInVGWLKNNIKFAYMYMFRKL 560
Cdd:MTH00020 464 IFVGYLAKEMIWSFQI----TLPPIVPLS------------IKLLPVFLSLGGIGLVIIL-YFYSSKTFRVPFSFIGRNS 526
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 385153535 561 AFLLSKKIYWDKLYNSIIVSSLMNFGYTISFKNIDRGFIELLGPYGISRIIKNWSMKIIRIQTGQVTHYTFFVVFG 636
Cdd:MTH00020 527 YTFLGSAWQFNYILNYFLIKKIWKGGHLISYRTIDKGVLELVGPKGISNFLIILTQGLSSLQSGLVFNYALVILIG 602
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
1-636 |
0e+00 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 585.02 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 1 MYLLIVVLPLVGTLATGLGGRWLGRKGANVFSTVCVFMCLFFSLIAFFEV--GLCGVPCYMSVGTWISSGALKISWGFLF 78
Cdd:TIGR01974 2 LIFLIVFLPLIGFLIAGLFGRRIGERVSGIIGIGSVGLSAALSAFVFVDFflNGEGEAFTQSLFPWISVGGFQVDFGLRL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 79 DSLTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRL 158
Cdd:TIGR01974 82 DGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKP 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 159 CANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYELVFSLASlykdyNVHFlgfsiNFLTLIGFFLLIGAVGKSAQLG 238
Cdd:TIGR01974 162 SANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAP-----GAFF-----SALTLICLLLFIGAMGKSAQLP 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 239 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYSTCS 318
Cdd:TIGR01974 232 LHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMS 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 319 QLGYMVFACGLSYYNISMFHLVNHAFFKALLFLSAGSVIHALSNEQDMRRMGSLATNLPITYSAMLIGSLSLAGFPFLTG 398
Cdd:TIGR01974 312 QLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAG 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 399 FYSKDLIIEITQISyysnlqiNFGVFACWLANISVFFTSFYTFRLLFLTFikNSNNYRKHMDNVHESSLLILLPLILLGI 478
Cdd:TIGR01974 392 FFSKDLILEAAFAS-------GTHSFLFVAGLIGAFLTAFYSFRLIFMVF--HGKERHEADAHPHESPLVMLLPLIVLAV 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 479 ASIFVGFFTKDLFVGIGTPFWKNAINIlpsscslLEVEFMSHLIKWLPFILSVFGAIFAYTInvgWLKNN-IKFAYMYMF 557
Cdd:TIGR01974 463 GSVFAGFFIVPLFEFLKGVLPTSAEPA-------LEHHHVPALEIWSPTAVAILGILLAYLL---YLGNPtLPAKIAQRH 532
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 385153535 558 RKLAFLLSKKIYWDKLYNSIIVSSLMNFGYTISfKNIDRGFIELLGPyGISRIIKNWSMKIIRIQTGQVTHYTFFVVFG 636
Cdd:TIGR01974 533 SGLYRLLLNKWYFDELYDKVFVKPYLFLGKLLW-KDPDDKIIDGFGP-GIARLVGAISKRLRKSQTGYLRWYAASMVVG 609
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-636 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 560.54 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 1 MYLLIVVLPLVGTLATGLGGRWLGRKGANVFSTVCVFMCLFFSLIAFFEVGlcGVPCYMSVGTWISSGALKISWGFLFDS 80
Cdd:COG1009 3 LLWLIPLLPLLGALLAGLLGRRLGRRAAGWLAALAPLAAFVLSLLLFPAVL--GGEVVVELYTWIPVGSLGLDFGFRLDG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 81 LTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLCA 160
Cdd:COG1009 81 LSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 161 NQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYELVFSLASLykdynvhflGFSINFLTLIGFFLLIGAVGKSAQLGLH 240
Cdd:COG1009 161 RRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPT---------ILSSPLLTLILLLLLLGAFGKSAQFPLH 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 241 TWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYSTCSQL 320
Cdd:COG1009 232 FWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQL 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 321 GYMVFACGLSYYNISMFHLVNHAFFKALLFLSAGSVIHALsNEQDMRRMGSLATNLPITYSAMLIGSLSLAGFPFLTGFY 400
Cdd:COG1009 312 GYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFF 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 401 SKDLIIEITQISYysnlqiNFGVFACWLANISVFFTSFYTFRLLFLTFIKNSNNyrKHMDNVHESSLLILLPLILLGIAS 480
Cdd:COG1009 391 SKEAILEAALEAG------GLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRP--KTPKHPHESPWLMTLPLVVLAVLS 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 481 IFVGFFTKDLFVGigtpFWKNAiNILPSSCSLLEvefmSHLIKWLPFILSVFGAIFAYTInvgWLKNNIKFAYmYMFRKL 560
Cdd:COG1009 463 LVLGLLLPGLLEG----LLAPA-AVLGGELHLAH----GLLLNALPLLLSLLGIALGYLL---YLKRPLPALA-ERLKPL 529
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 385153535 561 AFLLSKKIYWDKLYNSIIVSSLMNFGYTISFkniDRGFIELLgPYGISRIIKNWSMKIIRIQTGQVTHYTFFVVFG 636
Cdd:COG1009 530 YRLLANKWYFDELYDALFVKPVRALARFLWF---DRYVIDGI-VNGLARLTLFSGRLLRRLQTGYLQFYALTILLG 601
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
1-634 |
6.28e-156 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 465.59 E-value: 6.28e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 1 MYLLIVVLPLVGTLATGLGGRWLGRKGANVFSTVCVFMCLFFSLIAFFEVGLCGVPCYMSVGTWISSGALKISWGFLFDS 80
Cdd:MTH00032 1 MYLLVLLLPFINAFLLGFFGRLIGTIGSGILSTICMGSSTLIALFLAYEVLINDAVVHIELYKWIESEIFITHIGLLYDT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 81 LTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLCA 160
Cdd:MTH00032 81 LSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 161 NQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYeLVFSLASLYK------DYNVHFLGFSINFLTLIGFFLLIGAVGKS 234
Cdd:MTH00032 161 NKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDF-LTFNGGSVGSgimdrgYYGGGAYESPLAPFAIIGILLLIGCIGKS 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 235 AQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAY 314
Cdd:MTH00032 240 AQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAY 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 315 STCSQLGYMVFACGLS-YYNISMFHLVNHAFFKALLFLSAGSVIHALS-NEQDMRRMGSLATNLPITYSAMLIGSLSLAG 392
Cdd:MTH00032 320 STCSQLGYMVLIIGIEgSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMG 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 393 FPFLTGFYSKDLIIEITQ------ISYYSNLQINFG-----------------------VFACWLANISVFFTSFYTFRL 443
Cdd:MTH00032 400 LPYLTGFYSKDLILELTYsgrnmgIPFGSSLLKIQGdigikkddrgsiggpegypsrgsAFAFWLGTVAALLTAFYSIRL 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 444 LFLTFIKNSNNYRKHMDNVHES--SLLILLPLILLGIASIFVGFFTKDLFVG-IGTPFWKNAINILPSSCSLLEVEfmsh 520
Cdd:MTH00032 480 VYITFIISPNSPKESLISSHINivDKRVLTVLSLLCFGAIFVGYLIQDILIGdIEHPIVPPLIKVMPTLMGLFGMG---- 555
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 521 likwlpfiLSVFGAIFAYTINVGWLKNNIKFAYMYmfrKLAFLLSKKIYWDKLYNSIIVSSLMNFGYTISFKNIDRGFIE 600
Cdd:MTH00032 556 --------LCLWAQKGTREGELYWGFDPIGPSFLL---SIYSFLGGAWQGDHLINKLVAIPLFSFGHWGIYKTLDRGWLE 624
|
650 660 670
....*....|....*....|....*....|....
gi 385153535 601 LLGPYGISRIIKNWSMKIIRIQTGQVTHYTFFVV 634
Cdd:MTH00032 625 LFGPQGISTIALRVSQFISNLQSGVISRYALVLL 658
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
4-448 |
7.54e-120 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 372.43 E-value: 7.54e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 4 LIVVLPLVGTLATGLG----GRWLG--RKGANVFSTVCVFMCLFFSLIAFFEvGLCGVPCYMSVGTWISSGALKISWGFL 77
Cdd:PRK07376 10 LIPVLPLLGAVLVGLGlisfNQTTNrlRQPVAVLLISLVGAAAVLSYALLWS-QIQGHEPYERLFEWASAGDFHLPMGYV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 78 FDSLTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTR 157
Cdd:PRK07376 89 IDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 158 LCANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYELV-FSLASLYKDYNVhflgfSINFLTLIGFFLLIGAVGKSAQ 236
Cdd:PRK07376 169 KGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIaDRLSELVSSGAV-----SGWLALLLCILVFLGPMAKSAQ 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 237 LGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYST 316
Cdd:PRK07376 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYST 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 317 CSQLGYMVFACGLSYYNISMFHLVNHAFFKALLFLSAGSVIHALSN--------EQDMRRMGSLATNLPITYSAMLIGSL 388
Cdd:PRK07376 324 ISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCL 403
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 385153535 389 SLAGFPFLTGFYSKDliiEITQISYYSNLqinfgvfACWLAN-ISVFFTSFYTFRLLFLTF 448
Cdd:PRK07376 404 AISGIPPFAGFWSKD---EILGAAFEANP-------ALWFVGfLTAGMTAFYMFRMYFLTF 454
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
63-629 |
8.47e-118 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 364.87 E-value: 8.47e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 63 TWISSGALKISWGFLFDSLTTTMLVV---IT-SISSlvhlYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFL 138
Cdd:MTH00004 67 PWIFTTTFNIPISFKLDQYSLMFLPIalfVTwSILE----FSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFI 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 139 GWEGVGLASYLLINFWYTRLCANQAAIKALVVNRVGDLGLslgIFSIFYL---FGSVDYELVFSLASlykdynvhflgfs 215
Cdd:MTH00004 143 GWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGL---ILSMAWLamtLNTWEIQQLFSPTQ------------- 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 216 INFLTLIGffLLIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTA 295
Cdd:MTH00004 207 TPTLPLLG--LILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTT 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 296 FFASIVGVFQNDIKRVIAYSTCSQLGYMVFACGLSYYNISMFHLVNHAFFKALLFLSAGSVIHALSNEQDMRRMGSLATN 375
Cdd:MTH00004 285 LFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKT 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 376 LPITYSAMLIGSLSLAGFPFLTGFYSKDLIIEITQISYysnlqINfgVFACWLANISVFFTSFYTFRLLFLTFIKNSNNy 455
Cdd:MTH00004 365 LPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSY-----LN--AWALLLTLLATSFTAAYSLRMILLVQTGFPRT- 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 456 rKHMDNVHESSLLILLPLILLGIASIFVGFFTKdlfvgigtpfwknaINILPSSCSLLEvefMSHLIKWLPFILSVFGAI 535
Cdd:MTH00004 437 -PPTTPINENTPTIINPITRLALGSILAGLLIS--------------STILPTKTPPMT---MPTTTKLAALIVTILGIL 498
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 536 FA--YTINVGWLKNNIKFAYMYMFRKLAFllskkiywdklYNSI----IVSSLMNFGYTISFKNIDRGFIELLGPYGISR 609
Cdd:MTH00004 499 LAleLSNMTTTLTPPKQNTLHNFSNQLAF-----------FNPLthrlLPMTLLKSSQKIATHLIDLSWLEKMGPKGLAN 567
|
570 580
....*....|....*....|
gi 385153535 610 IIKNWSMKIIRIQTGQVTHY 629
Cdd:MTH00004 568 LQLTASKTLTTLQKGLIKNY 587
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
41-632 |
6.22e-117 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 363.14 E-value: 6.22e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 41 FFSLIA-FFEVGLCGVPCYMSVGTWISSGALKISWGFLFDSLTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEI 119
Cdd:MTH00208 67 FLSLINlLIWILLGCPNINISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLII 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 120 FTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLCANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYELVFS 199
Cdd:MTH00208 147 FLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILS 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 200 LASlykdynvhflgfSINFLTLIGFF-LLIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIID 278
Cdd:MTH00208 227 LNN------------SNSFLINILLFgILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLIS 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 279 LSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYSTCSQLGYMVFACGLSYYNISMFHLVNHAFFKALLFLSAGSVIH 358
Cdd:MTH00208 295 NSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIH 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 359 ALSNEQDMRRMGSLATNLPITYSAMLIGSLSLAGFPFLTGFYSKDLIIEITQISyYSNLqinFGVFacwLANISVFFTSF 438
Cdd:MTH00208 375 SLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLAS-ISNL---LSII---LALIATLLTAV 447
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 439 YTFRLLFLTFIKNSNNYRkhMDNVHESSLLILLPLILLGIASIFVGFFtkdlfvgIGTPFWKNAINILPSscsllevefm 518
Cdd:MTH00208 448 YSFRIIFFCFLNNPSFSP--LSPISEENPNLTNPLLRLAIGTIISGWF-------FSNFVFNLPPLTLPL---------- 508
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 519 shLIKWLPFILSVFGAIFAYTINVGWLKNNIKFAYMYmfrklafLLSKKIYWDKLYNSIIVSSLMNFGYTISFKNIDRGF 598
Cdd:MTH00208 509 --ILKSLPLIVTIIGAAFSFSFLLSLSSNPINSNFFS-------FLSNQWFFVNISHSIIISFSFFTSLFGSTRTLDRGW 579
|
570 580 590
....*....|....*....|....*....|....
gi 385153535 599 IELLGPYGISRIIKNWSMKIIRIQTGQVTHYTFF 632
Cdd:MTH00208 580 SENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLS 613
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
23-629 |
4.30e-112 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 349.64 E-value: 4.30e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 23 LGRKGANVFSTVCVFMCLFFSLIAFFEVGLCGVPCYMSVGTWISSGALKISWGFLFDSLTTTMLVVITSISSLVHLYSIQ 102
Cdd:MTH00211 22 LPLNNSKLHIKKAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLW 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 103 YMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLCANQAAIKALVVNRVGDLGLSLGI 182
Cdd:MTH00211 102 YMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSM 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 183 FSIFYLFGSvdyelvfslaslykdYNVHFLGFSINFLTLIGFFLLIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATM 262
Cdd:MTH00211 182 VWLLLNLNS---------------WEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTM 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 263 VTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYSTCSQLGYMVFACGLSYYNISMFHLVNH 342
Cdd:MTH00211 247 VVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTH 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 343 AFFKALLFLSAGSVIHALSNEQDMRRMGSLATNLPITYSAMLIGSLSLAGFPFLTGFYSKDLIIEITQISYYSnlqinfg 422
Cdd:MTH00211 327 AFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLN------- 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 423 VFACWLANISVFFTSFYTFRLLFLTFIKNSNNYrkHMDNVHESSLLILLPLILLGIASIFVGFFTKDLFVGIGTpfwkna 502
Cdd:MTH00211 400 AWALLLTLLATSLTAAYSFRLIFLSLGGYPRFL--SLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKP------ 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 503 inilpsscsllEVEFMSHLIKWLPFILSVFGAIFAYTInVGWLKNNIKFAYMYMFRKLAFllskkiywdklYNSII---- 578
Cdd:MTH00211 472 -----------EILSLPFLLKLMPLLVTIVGLLLGLEL-VNLTHKQLKTSTLSFSNMLGY-----------YPPIIhrll 528
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|.
gi 385153535 579 VSSLMNFGYTISFKNIDRGFIELLGPYGISRIIKNWSMKIIRIQTGQVTHY 629
Cdd:MTH00211 529 PKLSLKWGQTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSY 579
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
4-448 |
1.70e-108 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 344.57 E-value: 1.70e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 4 LIVVLPLVGTLATGLGgRWLGRKGANVFSTVCVFMCLFFSLIA-FFEVGLC-----GVPCYMSVGTWISSGALKISWGFL 77
Cdd:CHL00025 10 IIPFLPLPVPMLIGLG-LLLFPTATKNLRRMWAFPSILLLSIVmIFSLNLSiqqinGSSIYQYLWSWTINNDFSLEFGYL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 78 FDSLTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTR 157
Cdd:CHL00025 89 IDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 158 LCANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYELVFS-LASLYKDYNVHFLgfsinFLTLIGFFLLIGAVGKSAQ 236
Cdd:CHL00025 169 PIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEiFNNLIYNNEVNLL-----FATLCAFLLFLGPVAKSAQ 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 237 LGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYST 316
Cdd:CHL00025 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYST 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 317 CSQLGYMVFACGLSYYNISMFHLVNHAFFKALLFLSAGSVIHAL--------SNEQDMRRMGSLATNLPITYSAMLIGSL 388
Cdd:CHL00025 324 MSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTL 403
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 389 SLAGFPFLTGFYSKDliiEITQISYYSNLqiNFGVFACWLANisvfFTSFYTFRLLFLTF 448
Cdd:CHL00025 404 SLCGIPPLACFWSKD---EILNDSWLYSP--IFAIIAWSTAG----LTAFYMFRIYLLTF 454
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
64-629 |
1.20e-104 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 330.33 E-value: 1.20e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 64 WISSGALKISWGFLFDSLTT----TMLVVITSISSlvhlYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLG 139
Cdd:MTH00066 66 WMNIFNFNINSSFKFDQYSIiflpIALFVTWSILE----FAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIG 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 140 WEGVGLASYLLINFWYTRLCANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYELVFSLaslykdynvhflgFSINFL 219
Cdd:MTH00066 142 WEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLL-------------NDNSTL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 220 TLIGFFLliGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFAS 299
Cdd:MTH00066 209 PLLGLIL--AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 300 IVGVFQNDIKRVIAYSTCSQLGYMVFACGLSYYNISMFHLVNHAFFKALLFLSAGSVIHALSNEQDMRRMGSLATNLPIT 379
Cdd:MTH00066 287 ACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPIT 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 380 YSAMLIGSLSLAGFPFLTGFYSKDLIIEITQISYysnlqINFgvFACWLANISVFFTSFYTFRLLFLTfiknSNNYRKH- 458
Cdd:MTH00066 367 TSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSN-----LNS--WALILTLIATSFTAVYSFRIIYFS----SMKFPRSl 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 459 -MDNVHESSLLILLPLILLGIASIFVGFFTkdlfvgigtpfwknAINILPSSCSLLEvefMSHLIKWLPFILSVFGAIFA 537
Cdd:MTH00066 436 pLSPINENNPLIINPIKRLAWGSIIAGLLI--------------IFNILPMKPQILT---MPTFMKLAALLVTLLGLLIA 498
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 538 YTI-NVGWLKNNIKFAYMYmFRKLAFllskkiywdklYNSII----VSSLMNFGYTISFKNIDRGFIELLGPYGISriik 612
Cdd:MTH00066 499 LDLaKITSKTTPKTKMHSF-SNLLAF-----------FPTIIhrlsPKTNLNSGQNIATHLTDMTWYEKSGPKGLT---- 562
|
570 580
....*....|....*....|.
gi 385153535 613 NWSMKIIR----IQTGQVTHY 629
Cdd:MTH00066 563 NQQLPPIKtitnIQTGLIKTY 583
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
64-447 |
1.20e-102 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 325.27 E-value: 1.20e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 64 WISSGALKISWGFLFDSLTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGV 143
Cdd:MTH00108 68 WMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGV 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 144 GLASYLLINFWYTRLCANQAAIKALVVNRVGDLG--LSLGIFSIFYlfGSVDYELVFSLASlykdynvhflgfSINFLTL 221
Cdd:MTH00108 148 GIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGfiLAMAWFLLNL--NSWDLQQIFMLNP------------NNSNLPL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 222 IGffLLIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIV 301
Cdd:MTH00108 214 MG--LLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAIC 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 302 GVFQNDIKRVIAYSTCSQLGYMVFACGLSYYNISMFHLVNHAFFKALLFLSAGSVIHALSNEQDMRRMGSLATNLPITYS 381
Cdd:MTH00108 292 ALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTST 371
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 385153535 382 AMLIGSLSLAGFPFLTGFYSKDLIIEITQISYysnlqINfgVFACWLANISVFFTSFYTFRLLFLT 447
Cdd:MTH00108 372 ALIIGSLALTGMPFLTGFYSKDLIIEAANTSY-----TN--AWALLITLIATSLTAAYSTRIIFFA 430
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
103-445 |
7.43e-99 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 315.62 E-value: 7.43e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 103 YMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLCANQAAIKALVVNRVGDLGLslgI 182
Cdd:MTH00137 111 YMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---I 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 183 FSIFYL---FGSVDYELVFSLAslyKDYNvhflgfsinfLTLIGFFLLIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHA 259
Cdd:MTH00137 188 LAMAWMatnLNSWEIQQIFALS---KDFD----------LTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHS 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 260 ATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYSTCSQLGYMVFACGLSYYNISMFHL 339
Cdd:MTH00137 255 STMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHI 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 340 VNHAFFKALLFLSAGSVIHALSNEQDMRRMGSLATNLPITYSAMLIGSLSLAGFPFLTGFYSKDLIIEITQISYysnlqI 419
Cdd:MTH00137 335 CTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSH-----L 409
|
330 340
....*....|....*....|....*.
gi 385153535 420 NfgVFACWLANISVFFTSFYTFRLLF 445
Cdd:MTH00137 410 N--AWALTLTLIATSFTAVYSLRVVF 433
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
37-635 |
1.36e-84 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 277.02 E-value: 1.36e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 37 FMCLFFSLIAFFEVGLcgvpcymsvgtwISSGALKISWGFLFD--SLTTTMLVVItsISSLVHLYSIQYMEYDPHCPRFM 114
Cdd:MTH00165 23 LYFLLNDYSLFIEWEL------------FSLNSSSIVMTFLFDwmSLLFMSFVLF--ISSMVIYYSKSYMSGDKNINRFI 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 115 SFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLCANQAAIKALVvNRVGDLGLSLGIfSIFYLFGSVDY 194
Cdd:MTH00165 89 YLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALS-NRIGDVAILLSI-AWMMNFGSWNF 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 195 elVFSLASLYKDynvhflgfsiNFLTLIGFFLLIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCS 274
Cdd:MTH00165 167 --IFYLDFMKNS----------FEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 275 PIIdLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYSTCSQLGYMVFACGLSYYNISMFHLVNHAFFKALLFLSAG 354
Cdd:MTH00165 235 NLL-FSSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 355 SVIHALSNEQDMRRMGSLATNLPITYSAMLIGSLSLAGFPFLTGFYSKDLIIEITQISYysnlqINFGVFacWLANISVF 434
Cdd:MTH00165 314 SIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSN-----LNFFIF--FLFFFSTG 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 435 FTSFYTFRLLFLTFIKNSNNYRKHmdNVHESSLLILLPLILLGIASIFVGFFTkdlfvgigtpFWknaiNILPSSCSLle 514
Cdd:MTH00165 387 LTVSYSFRLIYYSMSGDFNLKSLN--NLSDESKFMLKSMILLLFMSIFGGSML----------SW----LIFPEPYMI-- 448
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 515 veFMSHLIKWLPFILSVFGAIFAYTINVGWLKNNIKFAYMYmfrKLAFLLSKKIYWDKLYNSIIVSSLMNFGYtISFKNI 594
Cdd:MTH00165 449 --CLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLKSLKNY---KLSSFLGSMWFMPFLSTYGISYYPLNLGS-LSLKSF 522
|
570 580 590 600
....*....|....*....|....*....|....*....|.
gi 385153535 595 DRGFIELLGPYGISRIIKNWSMKIIRIQTGQVTHYTFFVVF 635
Cdd:MTH00165 523 DQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFLL 563
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
35-635 |
1.32e-80 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 266.32 E-value: 1.32e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 35 CVFMCLFFSLIAFFEVGLCGVPCYmsvgTWISSGALKISWGFLFDSLTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFM 114
Cdd:MTH00151 13 SYSVFLFPLLGYFGLNGISLIFEW----ELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFM 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 115 SFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFwYTRLCANQAAIKALVVNRVGDlglSLGIFSIFYLFGSVDY 194
Cdd:MTH00151 89 WLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIY-YQNKKSLSAGMLTALTNRIGD---VLILLSIALLVLLGHW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 195 ELVFslaslykdynvhflGFSINFLTLIGFFLLIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCS 274
Cdd:MTH00151 165 SILS--------------MWDFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFF 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 275 PIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYSTCSQLGYMVFACGLSYYNISMFHLVNHAFFKALLFLSAG 354
Cdd:MTH00151 231 PFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAG 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 355 SVIHALSNEQDMRRMGSLATNLPITYSAMLIGSLSLAGFPFLTGFYSKDLIIEitqISYYSNLqinfGVFACWLANISVF 434
Cdd:MTH00151 311 SIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILE---SSLMSPT----SLLMVLLMFVGVG 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 435 FTSFYTFRLLFltFIKNSNNYRKHMDNVHESSLLILLPLILLGIASIFVGFFTKDLFVGIGTPFWknainilpsscslle 514
Cdd:MTH00151 384 LTALYSARLSF--CLVWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFF--------------- 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 515 vefMSHLIKWLPFILSVFGAIFAYtinVGWLKNNIKFAYM---YMFRKLAFLlskkiywdklyNSIIVSSLMNFGY---T 588
Cdd:MTH00151 447 ---LPSYLKLLIGFVILLGLFLSF---GFWDSGFSSSKMVklsFFFSSMWFL-----------SPLSSQPLKSLSLklsN 509
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 385153535 589 ISFKNIDRGFIELLGPYGISRIIKNWSMKIIRIQTGQVTHYTFFVVF 635
Cdd:MTH00151 510 SSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILL 556
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
65-635 |
2.08e-75 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 252.26 E-value: 2.08e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 65 ISSGALKISWGFLFDSLTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVG 144
Cdd:MTH00209 37 LSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLIFVPNLITLLLGWDGLG 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 145 LASYLLINFWYTRLCANQAAIKALVvNRVGDLGLslgIFSIFYlfgsvdyelvfslASLYKDYNVHFLGFSINFLTLIGF 224
Cdd:MTH00209 117 LVSYLLVIYYQNSKSLSAGMLTALT-NRVGDALL---ILSIAW-------------MLMHGNWNIFYLNFNSNLGSVISV 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 225 FLLIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVGVF 304
Cdd:MTH00209 180 LIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASMSANV 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 305 QNDIKRVIAYSTCSQLGYMVFACGLSYYNISMFHLVNHAFFKALLFLSAGSVIHALSNEQDMRRMGSLATNLPITYSAML 384
Cdd:MTH00209 260 ESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSICLN 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 385 IGSLSLAGFPFLTGFYSKDLIIEitqisyySNLQINFGVFACWLANISVFFTSFYTFRLLFLTFIKNSNNyrKHMDNVHE 464
Cdd:MTH00209 340 IANLSLCGIPFLAGFYSKDLILE-------SMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSS--KSLNSSFD 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 465 SSLLILLPLILLGIASIFVGFFTKDLFVgigtpfwknainilpsscSLLEVEFMSHLIKWLPFILSVFGAIFAYTinvgw 544
Cdd:MTH00209 411 QNKLNLKPMLVLTLGSITGGSVMSWVMV------------------PSVNSVVLPWFLKLLPIMLILFGVLLMYM----- 467
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 545 LKNNIKFAYMYMfrKLAFLLSKKIYWDKLYNSIIVSSLMNFGYTiSFKNIDRGFIELLGPYGISRIIKNWSMKIIRIQTG 624
Cdd:MTH00209 468 VLKKNFFLIKGY--KVNYFLSQMWFLPDLSSQPVNKFTMKLSKT-MLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNN 544
|
570
....*....|.
gi 385153535 625 QVTHYTFFVVF 635
Cdd:MTH00209 545 SLKLFVTFMML 555
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
77-631 |
4.12e-66 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 227.73 E-value: 4.12e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 77 LFDSLTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYT 156
Cdd:MTH00207 54 ILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQN 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 157 RLCANQAAIKALVvNRVGDLGLSLGI--------FSIFYLFGSvdyelvfslaslykdynvhflgfsiNFLTLIGFFLLI 228
Cdd:MTH00207 134 PKSLGAGMITALT-NRIGDVMLLLSIgwtlnqghWSITNMWQT-------------------------DMNNYIALSIMI 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 229 GAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIidLSSNILF--LITIIGSSTAFFASIVGVFQN 306
Cdd:MTH00207 188 AAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPF--LSSTYWFnpALLLTASLTMLMAGLSAMTEC 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 307 DIKRVIAYSTCSQLGYMVFACGLSYYNISMFHLVNHAFFKALLFLSAGSVIHALSNEQDMRRMGSLATNLPITYSAMLIG 386
Cdd:MTH00207 266 DMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIA 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 387 SLSLAGFPFLTGFYSKDLIIEITQISYYSNLQINFGVFAcwlanisVFFTSFYTFRLLFLTFIknSNNYRKHMDNVHESS 466
Cdd:MTH00207 346 NLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLA-------TALTAAYSTRFTLAVLW--SPNSSSPYHHLEDED 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 467 LLILLPLILLGIASIFVGfftkdlfvgigtpfwkNAIN-ILPsscSLLEVEFMSHLIKWLPFILSVFGAIFAYTInvgwL 545
Cdd:MTH00207 417 KSLTTPMLLLTLGAITSG----------------SALNwWLP---TPQEEPILPLQYKLLPLLVVTLGALLAWLF----T 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 546 KNNIKFAYMYMFRKLAFLLSKKI-YWDKLYNSIIVSSLMNFGYTiSFKNIDRGFIELLGPYGISRIIKNWSMKIIRIQTG 624
Cdd:MTH00207 474 TPNITKTPLLINNPLSHFASCLMwFLVPLSSQFIMSTPMNLSHN-YLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKN 552
|
....*..
gi 385153535 625 QVTHYTF 631
Cdd:MTH00207 553 IPNNYLM 559
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
20-425 |
2.24e-62 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 221.33 E-value: 2.24e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 20 GRWLGRKGANVFSTVCVFmcLFFSLIAFFEVGLCGVPCYMSVgTWISSgaLKISWGFLFDSLTTTMLVVITSISSLVHLY 99
Cdd:PRK12647 9 HRLFGRNAGWLLALLPLA--LFLYFLSFIPEIAAGETVRGGY-AWVPS--LGVNLSFLLDGLSLTFALLITGIGTLIVLY 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 100 SIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLCANQAAIKALVVNRVGDLGLS 179
Cdd:PRK12647 84 AGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 180 LGIFSIFYLFGSvdyelvFSLASLYKDYNV---HFLGFSINFLtligffLLIGAVGKSAQLGLHTWLPDAMEGPTPVSAL 256
Cdd:PRK12647 164 AGLILLGNVTGT------YSLSELLASGDVireHPLYLAILLL------VLGGAFTKSAQFPFHFWLPNAMEAPTPVSAY 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 257 IHAATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYSTCSQLGYMVFACGL-SYYNIS 335
Cdd:PRK12647 232 LHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLgSELAIK 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 336 --MFHLVNHAFFKALLFLSAGSVIHAlSNEQDMRRMGSLATNLPITYSAMLIGSLSLAGFPFLTGFYSKDLIIE-ITQIS 412
Cdd:PRK12647 312 aaVLFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEaLLEAP 390
|
410
....*....|...
gi 385153535 413 YYSNLQINFGVFA 425
Cdd:PRK12647 391 LWSLILTVAAVLG 403
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
130-407 |
1.49e-61 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 207.17 E-value: 1.49e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 130 ADNFVQMFLGWEGVGLASYLLINFWYTRLCANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYELVFslaslykdyNV 209
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELS---------KA 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 210 HFLGFSINFLTLIGFFLLIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIhAATMVTAGVFLIVRCSPIIDLSSN-ILFLI 287
Cdd:pfam00361 72 LTGGLNSSGLLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPfIQQIL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 288 TIIGSSTAFFASIVGVFQNDIKRVIAYSTCSQLGYMVFACGL-SYYNI--SMFHLVNHAFFKALLFLSAGSVIHALSNEQ 364
Cdd:pfam00361 151 LILAIISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAgTIYGIqaAIFHLLTHGLFSAGLFLCAGSVIYRRVHTR 230
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 385153535 365 DMRRMGSLATNLPITYSAMLIGSLSLAGFPFLTGFYSKDLIIE 407
Cdd:pfam00361 231 NIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-407 |
3.35e-60 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 207.69 E-value: 3.35e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 1 MYLLIVVLPLVGTLATGLGGRWlgRKGANVFSTVCVFMCLFFSLIAFFEVGLCGVPCYMsVGTWissgALKISWGFLFDS 80
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLGRR--RRLQRALSLLASLALLALALALLLQVLAGGPLVYA-LGGW----PAPFGIVLVADR 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 81 LTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLcA 160
Cdd:COG0651 77 LSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE-A 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 161 NQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYElvfslaslykDYNVHFLGFSINFLTLIGFFLLIGAVGKSAQLGLH 240
Cdd:COG0651 156 LRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMA----------DLAARLAELDPGLLLAAFALLLVGFGIKAALFPLH 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 241 TWLPDAM-EGPTPVSALIHAAtMVTAGVFLIVRCSPII---DLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYST 316
Cdd:COG0651 226 FWLPDAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSS 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 317 CSQLGYMVFACGLSYYNI---SMFHLVNHAFFKALLFLSAGSVIHALsNEQDMRRMGSLATNLPITYSAMLIGSLSLAGF 393
Cdd:COG0651 305 VSQIGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERAT-GTRDLDKLGGLGKRMPLTAAAFLIGALALAGL 383
|
410
....*....|....
gi 385153535 394 PFLTGFYSKDLIIE 407
Cdd:COG0651 384 PPLSGFVSKWLLLQ 397
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
70-486 |
6.06e-57 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 206.62 E-value: 6.06e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 70 LKISWGFLFDSLTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYL 149
Cdd:TIGR00940 65 LGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 150 LINFWYTRLCANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSvdYELVFSLASLYKDYNVHFLGFSInfltligFFLLIG 229
Cdd:TIGR00940 145 LISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGS--FSIDAVIASADAIRNSPLFGTAM-------VLVLLG 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 230 AVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIK 309
Cdd:TIGR00940 216 AFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLK 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 310 RVIAYSTCSQLGYMVFACGLSYYNI----------------SMFHLVNHAFFKALLFLSAGSVIHAlSNEQDMRRMGSLA 373
Cdd:TIGR00940 296 GILAFSTISQLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLF 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 374 TNLPITYSAMLIGSLSLAGFPFLTGFYSKDLIIEITQISYYSNL--QINFGVFACWLANISVFFTSFYTFRLLFLTFIK- 450
Cdd:TIGR00940 375 HIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAITAHLVNPfdTVTLGYLFPYVATVASVFTFVYSLRFIHGVFFGr 454
|
410 420 430
....*....|....*....|....*....|....*..
gi 385153535 451 -NSNNYRKHmdnVHESSLLILLPLILLGIASIFVGFF 486
Cdd:TIGR00940 455 pKPEDLPRK---PHEPPRWMLASPDILVLLVLVFGLF 488
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
63-448 |
8.15e-57 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 206.31 E-value: 8.15e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 63 TWISSgaLKISWGFLFDSLTTTMLVVITSISSLVHLYSIQYMEYDPH-CPRFMSFLEIFTFFMIVLVTADNFVQMFLGWE 141
Cdd:PRK12645 63 PWIPS--LGINFTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEqLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 142 GVGLASYLLINFWYTRLCANQAAIKALVVNRVGDLGLsLGIFSIFYLF-GSVDYELVFSLASLYKDYnvhflGFSINFLT 220
Cdd:PRK12645 141 LTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSM-LGGFILLYIMtGSFSIREMIANADEIQNS-----PLFIPAMI 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 221 LIgfflLIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASI 300
Cdd:PRK12645 215 LI----LLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSL 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 301 VGVFQNDIKRVIAYSTCSQLGYMVFACGLS----YYNIS------------MFHLVNHAFFKALLFLSAGSVIHAlSNEQ 364
Cdd:PRK12645 291 NAVKQTDLKGILAFSTVSQLGLIMSLLGIGaaslHYQGDdskiyaaaitaaIFHLINHATFKGSLFMIVGIVDHE-TGTR 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 365 DMRRMGSLATNLPITYSAMLIGSLSLAGFPFLTGFYSKDL----IIEITQISYYS--NLQINFGVFAcWLANIsvfFTSF 438
Cdd:PRK12645 370 DIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMffesMLNATEANLFSldTWGVLFPVIA-WVASV---FTFV 445
|
410
....*....|
gi 385153535 439 YTFRLLFLTF 448
Cdd:PRK12645 446 YSIIFIFKTF 455
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-402 |
6.37e-56 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 205.04 E-value: 6.37e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 1 MYLLIVVLPLVGTLATGLGGRwLGRKGANVFSTVCVFMCLFFSLIAFFEVGLCGVPCYMSvgTWISsgALKISWGFLFDS 80
Cdd:PRK12648 2 SLLLLVLLPFLGALLAALLPR-NARNAEAWLAGLVALAALVLLALLYPAVAAGEVIRAEI--EWLP--ALGLNLSLRLDG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 81 LTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLCA 160
Cdd:PRK12648 77 LAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADA 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 161 NQAAIKALVVNRVGDLGLSLGIFSIFYLFGSvdYELVFSLAS--------LYkdynvhflgfsINFLTLIgfflLIGAVG 232
Cdd:PRK12648 157 RRGARMALTVTGAGGLALLAGVLLLGHIVGS--YDLDVVLAAgdlirahpLY-----------PPALVLI----LLGAFT 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 233 KSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVI 312
Cdd:PRK12648 220 KSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLL 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 313 AYSTCSQLGYMVFACGLSyyniS-------MFHLVNHAFFKALLFLSAGSVIHAlSNEQDMRRMGSLATNLPITYSAMLI 385
Cdd:PRK12648 300 AYSTISHLGLITLLLGLG----SplaavaaIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMV 374
|
410
....*....|....*..
gi 385153535 386 GSLSLAGFPFLTGFYSK 402
Cdd:PRK12648 375 AAAAMAGVPLLNGFLSK 391
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
64-596 |
1.34e-54 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 199.98 E-value: 1.34e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 64 WISSgaLKISWGFLFDSLTTTMLVVITSISSLVHLYSIQYMEYD-PHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEG 142
Cdd:PRK12646 64 WMKT--LDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRkDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 143 VGLASYLLINFWYTRLCANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYELVFSLAslykdynvHFLGFSINFLTLI 222
Cdd:PRK12646 142 TSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQA--------DHIKNHGLFIPMI 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 223 gFFLLIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVG 302
Cdd:PRK12646 214 -FMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITA 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 303 VFQNDIKRVIAYSTCSQLGYMVFACGL-------------SYYNIS----MFHLVNHAFFKALLFLSAGSVIHAlSNEQD 365
Cdd:PRK12646 293 LKQWDLKGILAYSTISQLGMIMAMVGIgggyaqhqqdaiaSIYVFVlfaaLFHLMNHAIFKCALFMGVGIIDHE-AGTRD 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 366 MRRMGSLATNLPITYSAMLIGSLSLAGFPFLTGFYSKDLIIE-ITQISYYSNLQINFGVFACWLANISVFFTSFYTFRLL 444
Cdd:PRK12646 372 IRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDaLTQTGQLSQFSLISMIIIVFIGVIASIFTFTYALYMV 451
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 445 FLTFIKNSNNYRKHMDNVHESSLLILLPLILLGIASIFvgFFTKDLFVgigtpfwKNAINILPSSCSLLEVE---FMSHL 521
Cdd:PRK12646 452 KEVFWGKYDSKVFTKKNIHEPWLFSLPSLILMVLVPVI--FFVPNIFG-------KGIIVPALRSVSGGNHQvdqLAPHV 522
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 385153535 522 IKWLPFILSVFGAIFAYTInvgwlknnikfaymymfrklAFLLSKKIYWDKLYNSIIVSSLMNFGYTISFKNIDR 596
Cdd:PRK12646 523 SQWHGFNIPLLLTIIIILL--------------------GSVLAIKVDWKKVFTGKIRQISISKSYEMVYRHFEK 577
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
3-406 |
2.48e-53 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 190.57 E-value: 2.48e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 3 LLIVVLPLVGTLATGLGgrwLGRKGAnvfstvcvFMCLFFSLIAFFEVGLCGVPCYMSVGTWISSGALKIS----WGFLF 78
Cdd:PRK06525 5 LLTLLLPFIGALVVFFL---PGRRAA--------ELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNLGdvalFGLVI 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 79 DSLTTTMLVVITSISSLVHLYSIQYM-----EYDPH--CPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLI 151
Cdd:PRK06525 74 DPVSVLIGFVVVLLGLLVTLYSTGYMspgnrEHPVHegTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALI 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 152 NFwYTRLCANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDyelVFSLASLYKDynvhflgfsinfLTLIGF-FLLIGA 230
Cdd:PRK06525 154 SY-YQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFA---LSALSGLHGS------------LKYLVFlGILFAA 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 231 VGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCspIIDLSS---NILFLITIIGSSTAFFASIVGVFQND 307
Cdd:PRK06525 218 WGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA--IQSMGPiphVIGYVGAVMAIVTLLYGFLMYLPQQD 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 308 IKRVIAYSTCSQLGYMVFACGLSYY------NISMFHLVNHAFFKALLFLSAGSVIHALSNeQDMRRMGSLATNLPITYS 381
Cdd:PRK06525 296 MKRLLAYSTITQLGYMFFGLSLAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSCGT-RLLPRLRGVLKKLPLVGV 374
|
410 420
....*....|....*....|....*
gi 385153535 382 AMLIGSLSLAGFPFLTGFYSKDLII 406
Cdd:PRK06525 375 GFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
63-407 |
3.50e-51 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 190.04 E-value: 3.50e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 63 TWISSGALKISwgFLFDSLTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEG 142
Cdd:PRK12649 65 SWLPSAGVEFS--IYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWEL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 143 VGLASYLLINFWYTRLCANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYELVFSLASLYKDYNVHFLgfsiNFLTLI 222
Cdd:PRK12649 143 TSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPL----FLITLI 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 223 gfFLLIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVG 302
Cdd:PRK12649 219 --LIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLA 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 303 VFQNDIKRVIAYSTCSQLGYMVFACGLSYYN-------ISMFHLVNHAFFKALLFLSAGSVIHALSNeQDMRRMGSLATN 375
Cdd:PRK12649 297 FRQTDIKAILAYSTISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEAAT-RDIRKLGGLRKE 375
|
330 340 350
....*....|....*....|....*....|..
gi 385153535 376 LPITYSAMLIGSLSLAGFPFLTGFYSKDLIIE 407
Cdd:PRK12649 376 MPITFIVASIAALAMAGIPPLNGFLSKEMFYE 407
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
3-486 |
5.01e-51 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 191.02 E-value: 5.01e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 3 LLIVVLPLVGTLATGLGGRWLGRKGANVFSTVcvFMCLFFSLIAFFEVGLCGVPCYMSVgTWIS---SGALKISWGFLFD 79
Cdd:PRK12650 2 LAVLALAALAVVLAPPLVRVLDRKAGWPLAAI--FVAAAGLLLKELPPILDGDALTWSV-TWIPdllGNGVDVNLALRAD 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 80 SLTTTMLVVITSISSLVHLYSIQYMeydPHCPRFMSFLEIFTFFM---IVLVTADNFVQMFLGWEGVGLASYLLINfwYT 156
Cdd:PRK12650 79 ALSLFFALLALVIGAVVFIYSARYL---PRKKGNTSFYLLMTAFMaamLLLVLADDVVVLFVAWELVSLASFFLIA--RS 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 157 RLCANQAAIKALVVNRVGDLGL--SLGIFSIfyLFGSVDYELVfsLASlykdynvHFLGFSINFLTLIGFFLLIGAVGKS 234
Cdd:PRK12650 154 GSGGEAGSIRTLILTFFGGLTLlaAVAIAAT--QTGTTSLSGI--LHS-------DVWAEKPGLTTVVAVLIAVAAFTKS 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 235 AQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAY 314
Cdd:PRK12650 223 AQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAY 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 315 STCSQLGYMVFACGL-SYYNIS--MFHLVNHAFFKALLFLSAGSVIHAlSNEQDMRRMGSLATNLPITYSAMLIGSLSLA 391
Cdd:PRK12650 303 STVSQLGWIVATIGVgTPFALTaaVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSMA 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 392 GFPFLTGFYSKDLIIEitqisyySNLQINFGVFACWL----ANISVFFTSFYTFRLLFLTFIKNSNNyrkhMDNVHESSL 467
Cdd:PRK12650 382 AVPPLFGFVSKEGMLT-------AFLEAPGGNAGVVLllvgAALGAVFTFAYSARLVLGAFVDGPRD----MSHVKEAPV 450
|
490
....*....|....*....
gi 385153535 468 LILLPLILLGIASIFVGFF 486
Cdd:PRK12650 451 SLWLPAALPGALSLPLGLV 469
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
3-407 |
5.55e-51 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 190.91 E-value: 5.55e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 3 LLIVVLPLVGTLATGLGGRWLGRKGANVFSTVcVFMCLFFSLIAFFEVGLCGVPcyMSVGTWISSgaLKISWGFLFDSLT 82
Cdd:PRK12644 2 LALLLAHAVAALLAPLLVRRLGRRAFYVLALV-PAAAFVWVLAQWPAVLAGGAP--TEVVPWIPS--LGLDLAFRLDALA 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 83 TTMLVVITSISSLVHLYSIQYMEYD-PHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLCAN 161
Cdd:PRK12644 77 ALMSLLVLGVGALVLLYCARYFDDDePRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAASR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 162 QAAIKALVVNRVGDLGLSLGIFSI-----FYLFGSVdyeLVFSLASLYKDYNVhflgfsinfltligFFLLIGAVGKSAQ 236
Cdd:PRK12644 157 RAALQALLVTTAGGLAMLVGIIILgqaagTYRLSEL---LADPPTGPAVSVAV--------------VLILVGALSKSAI 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 237 LGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYST 316
Cdd:PRK12644 220 VPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGT 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 317 CSQLGYMVFACGLSYYN-----ISMfhLVNHAFFKALLFLSAGSVIHAlSNEQDMRRMGSLATNLPITYSAMLIGSLSLA 391
Cdd:PRK12644 300 VSQLGFLTVLVGIGTRDaalagLAM--LLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMA 376
|
410
....*....|....*.
gi 385153535 392 GFPFLTGFYSKDLIIE 407
Cdd:PRK12644 377 GLPPLLGFVAKEAALE 392
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
29-401 |
1.74e-49 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 182.80 E-value: 1.74e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 29 NVFSTVCVFmclFFSLIAFFEVGLCGvPCYMSVgTWISSGALKISWGFLFDSLTTTMLVVITSISSLVHLYSIQYMEYDP 108
Cdd:PRK07390 43 NLLMTLLAF---VHSLLALRAIWNQP-PQQLSF-PWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDW 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 109 HCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLCANQAAIKALVVNRVGDLGLSLGIFSIFYL 188
Cdd:PRK07390 118 GLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPL 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 189 FGSVDYElvfSLASLYKDYNVhflgfSINFLTLIGFFLLIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAAtMVTAGVF 268
Cdd:PRK07390 198 AGTLNFS---DLAAWAATANL-----DPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASILRNSV-VVATGAW 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 269 LIVRCSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYSTCSQLGYMVFACGLSYYNISMFHLVNHAFFKAL 348
Cdd:PRK07390 269 VLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKAL 348
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 385153535 349 LFLSAGSVIhALSNEQDMRRMGSLATNLPITYSAMLIGSLSLAGFPFLTGFYS 401
Cdd:PRK07390 349 LFMSVGSII-LTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-407 |
8.55e-42 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 158.50 E-value: 8.55e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 3 LLIVVLPLVGTLATGLGGRWLGRKGAnVFSTVCVFMclFFSLIAFFEVGLCGVPCYMSVGTWISSgalkISWGFLFDSLT 82
Cdd:PRK08375 7 PLLVAVPLLAAALIVLLPKRRRLRWA-LALLVAALT--FALAISLLPQVLDGGVIAYVVGGWPPG----IGIELRADSLS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 83 TTMLVVITSISSLVHLYSIQYMEydPHCPRFMS-FLEIFTFFMIVLVTADNFvQMFLGWEGVGLASYLLINFWYTRLCAN 161
Cdd:PRK08375 80 ALFLLVTSILAIAALLYAIGYGE--HRQTRFYAlFLLLLAGLLGALLTADLF-NLFVFLEIMSLSSYALVAMGGDRRALA 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 162 qAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYELVFSLASlykdynvhflgfSINFLTLIGFFLLIGAVGKSAQLGLHT 241
Cdd:PRK08375 157 -AARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------------ENPTVVTAFGFVLLALALKAAVFPLHT 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 242 WLPDAMEGPTPVSALIHAATMVTAGVFLIVRCS-----PIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYST 316
Cdd:PRK08375 224 WLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYST 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 317 CSQLGYMVFacGLSYYNI-----SMFHLVNHAFFKALLFLSAGSVIHAlSNEQDMRRMGSLATNLPITYSAMLIGSLSLA 391
Cdd:PRK08375 304 VSQMGYILL--GLALLTPlalaaGLLHLLHHALMKGALFLAAGAIEVT-YGTRRLSELSGLGRRMPLTAAAFAVASLSLI 380
|
410
....*....|....*.
gi 385153535 392 GFPFLTGFYSKDLIIE 407
Cdd:PRK08375 381 GVPPTSGFVSKWYLVV 396
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-439 |
2.09e-41 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 157.95 E-value: 2.09e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 4 LIVVLPLVGTLATGLGGRwLGRKGANVFSTVCVFMCLFFSLIAFFEVGLCGVPCYM------SVGTWISSGALKISWGFL 77
Cdd:PRK08376 9 LLIIIPLFGAFSMPIVSL-LGGKAREIWAVLISFLTLIVALLVFYEVWNNGTIVYVlgaespTLTLPFGSGGFPIRIIWE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 78 FDSLTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTR 157
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 158 LCANQAAIKALVvnrVGDLGLSLGIFSIFYLFGSVDyelvfSLASLYKDYNVHFLGFSINFLTLIgfFLLIGAVGKSAQL 237
Cdd:PRK08376 168 WEAIEAGIKYMF---VGSLASSMVLLGIALLYGQYG-----TLNMAYLAVKMSENPTVVAKIALA--LFIAGLAMKSGAV 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 238 GLHTWLPDAM-EGPTPVSALIHAATMvtAGVFLIVR-CSPIIDLSSNILFL---ITIIGSSTAFFASIVGVFQNDIKRVI 312
Cdd:PRK08376 238 PVHMWLPDAYpAAPSSISAMLLVIKQ--AGLYALARvLFSIYGPAINLATVgwvIIILGCLTMFVGVAMAVVQKDVKRLL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 313 AYSTCSQLGYMVFACGL-----------SYYNISM----FHLVNHAFFKALLFLSAGSVIHALSNeQDMRRMGSLATNLP 377
Cdd:PRK08376 316 AYHSVSQIGYMLLGLGVglaalgdpamaSYGEIALaggiYHIVNHALYKALLFLTAGAVIYETGT-RNLNELGGLARTMP 394
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 378 ITYSAMLIGSLSLAGFPFLTGFYSKDLIieitqisYYSNLQIN--FGVFA------CWLANISVFFTSFY 439
Cdd:PRK08376 395 KTTIAFLIGAAAIVGLPPFNGFASKWLI-------YESSALFNpiLGVIAmigsvlTLASFVKVFHTAFF 457
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
2-392 |
4.88e-40 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 154.09 E-value: 4.88e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 2 YLLIVVLP--LVGTLATGLG-GRWLGRKGANVFStvcvfmclFFSLIAFFEVGLCGVPCYMSVgTWISSGALKISwgflf 78
Cdd:PRK08168 3 LSVCALLPavLMSLAAGGLLlSRWLTRALWRIAQ--------AASLAGLFLALLGLVLFATGA-AWPAAAWLEVS----- 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 79 dSLTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRL 158
Cdd:PRK08168 69 -GLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 159 CANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSvdyelvFSLASLYKDYNvhfLGFSINFLTLIGFFLLIGAVGKSAQLG 238
Cdd:PRK08168 148 FARLAAHKKFIADRLAELLLLAAAALAYLEVGS------LSLSALWAHLA---AQGASPSLQAAALLLVLAVILKTAQLP 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 239 LHTWLPDAMEGPTPVSALIHAAtMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYSTCS 318
Cdd:PRK08168 219 VHGWLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVA 297
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 385153535 319 QLGYMVFACGLSYYNISMFHLVNHAFFKALLFLSAGSVIhalsnEQDMRRMGSLATNLPITYSAMLIGSLSLAG 392
Cdd:PRK08168 298 QMGFMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV-----RDTRLRRLQGPQSAAGVVSLLLAPLLSAAL 366
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
72-452 |
1.58e-39 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 152.76 E-value: 1.58e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 72 ISWGFLFDSLTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLI 151
Cdd:MTH00095 37 LSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLV 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 152 NFWYTrLCANQAAIKALVVNRVGDlglslgiFSIFYLFGSVDYelvfslaslykdYNVHFLGFSInFLTLIGFFLLIGAV 231
Cdd:MTH00095 117 LFYNN-WDSNSGAMNTALTNRIGD-------FFIFLFFSGFIF------------SSYYFFSFSF-FSSSMILMLLLTSF 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 232 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIdLSSNILFLITIIGSSTAFFASIVGVFQNDIKRV 311
Cdd:MTH00095 176 TKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLI-LNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKV 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 312 IAYSTCSQLGYMVFACGLSYYNISMFHLVNHAFFKALLFLSAGSVIHALSNEQDMRRMGSLATNLPITYSAMLIGSLSLA 391
Cdd:MTH00095 255 VALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLC 334
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 385153535 392 GFPFLTGFYSKDLIIEItqisYYSNlqiNFGVFACWLANISVFFTSFYTFRLLFLTFIKNS 452
Cdd:MTH00095 335 GLMFTSGMVSKELILEL----FFFN---NYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFS 388
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-450 |
1.95e-37 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 146.65 E-value: 1.95e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 4 LIVVLPLVGTLATGLGGRWLG--RKGANVFSTVCVFMCLFFSLIAFFEVGLCGVPCYMSVGTWISsgalKISWGFLFDSL 81
Cdd:PRK12667 8 LTPILLVLFAFLLPLLSILLKgnRKIQKIYALLVSLITLILSILLFIQVYSSNKPIVYLFGGWPA----PIGIVYEVDLL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 82 TTTMLVVITSISSLVHLYSIQYMEY-DPHCPRFMSFLEIFTFFMIVLVTADNFvQMFLGWEGVGLASYLLINFWYTRLCA 160
Cdd:PRK12667 84 GALLGLLTALVMFLILIYSYWYLEHeSGPEWYYTLLLGLEAGMLGILLTGDAF-NLFVMLEVLSISAYGLVAYYRDRGDA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 161 NQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDY-ELVFSLASLYKDYNVHFLGFSINFLTLIGFFLLIGAVGKSAQLGL 239
Cdd:PRK12667 163 VEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMaDLSAKIRGLSFPLTGGLAGNPPLALGVALALALWAFTIKAAIFPN 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 240 HTWLPDAM-EGPTPVSALIhAATMVTAGVFLIVR--------CSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKR 310
Cdd:PRK12667 243 HFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRflytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKR 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 311 VIAYSTCSQLGYMVFACGL-SYYNI--SMFHLVNHAFFKALLFLSAGSVIHAlSNEQDMRRMGSLATNLPITYSAMLIGS 387
Cdd:PRK12667 322 LLAYSTISHMGYIFMGIGIgTQLGLaaALFHIINHAIAKSLLFLASGVFIHA-AGTRDIDELAGLGRKMPIASFAFLIGA 400
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 385153535 388 LSLAGFPFLTGFYSKDLIieitqisYYSNLQINFGVFACWLANISVfFTSFYTFRLLFLTFIK 450
Cdd:PRK12667 401 LSLVGIPPLNGFFSKLLL-------FNALLESGFYLPALVLLIASA-ISLVGYFRAWYSLFFG 455
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
1-405 |
3.25e-37 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 147.73 E-value: 3.25e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 1 MYLLIVVLP-LVGTLATGLGGRWLGRKGANVfsTVCVFMCLFFSLIAFFEVGLCGVPcymSVGTWISSGALKISWG---F 76
Cdd:PRK06521 2 MLALQLLLLsLLLYLALGLAGLLLLRRPRLA--IRLSGPTGLLGGLLGLASGLTALF---AGPTLAAVLPLGLPFLpfhL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 77 LFDSLTTTMLVVITSISSLVHLYSIQYM-EYDPHCPRFMSFL-EIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFW 154
Cdd:PRK06521 77 RLDALSAFFLLVISLLGAAASLYSLGYFrEYEGKGPGAMGFFyNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIAN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 155 YTRLCANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYElVFSLASLykdynVHFLGFSINFLTLIGFflliGAvgKS 234
Cdd:PRK06521 157 HREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFA-AMRAAHL-----SPFWASLVFLLALFGF----GA--KA 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 235 AQLGLHTWLPDAM-EGPTPVSALIhAATMVTAGVFLIVRCSpiIDLSSNIL----FLITIIGSSTAFFASIVGVFQNDIK 309
Cdd:PRK06521 225 GLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVV--FDLLGAPGwwwgVLVLALGAISAVLGVLYALAEHDLK 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 310 RVIAYSTCSQLGYMVFACGLSYYNIS--------------MFHLVNHAFFKALLFLSAGSVIHALSnEQDMRRMGSLATN 375
Cdd:PRK06521 302 RLLAYSTIENIGIIFVGLGLAMVFIAygmpllaalaltaaLYHLLNHALFKSLLFLGAGAVLHATG-TRDMEKLGGLIRR 380
|
410 420 430
....*....|....*....|....*....|
gi 385153535 376 LPITYSAMLIGSLSLAGFPFLTGFYSKDLI 405
Cdd:PRK06521 381 MPWTAWAFLIGCLAISALPPLNGFVSEWLL 410
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
3-406 |
8.41e-31 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 126.35 E-value: 8.41e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 3 LLIVVLPLVGTLATGLGGRWlGRKGANVFSTVCVFMCLFFSLIAF--FEVGLCGVpCYMSVGTWISSgaLKISWGFLFDS 80
Cdd:COG1008 7 SLLILLPLLGALLLLLLPRR-NARLARWVALAVSLLTLLLSLYLLagFDPGTGGF-QFVESYPWIPS--LGISYHLGVDG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 81 LTTTMLVVITSISSLVHLYSIQYMEYDPHcpRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFW-YTRlc 159
Cdd:COG1008 83 ISLPLVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWgGER-- 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 160 ANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDyelvFSLASLYKdynvhfLGFSINFLTLIGFFLLIG-AVgKSAQLG 238
Cdd:COG1008 159 RIYAAIKFFLYTLAGSLLMLVAILALYFLAGALT----FDIAELAA------APLPLTAQLLLFLAFFIAfAV-KVPMFP 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 239 LHTWLPDA-MEGPTPVSAlIHAATMVTAGVFLIVR-CSPII-DLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYS 315
Cdd:COG1008 228 FHTWLPDAhVEAPTAGSV-LLAGVLLKMGGYGLLRfALPLFpEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYS 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 316 TCSQLGYMVFACG-LSYYNIS--MFHLVNHAFFKALLFLSAGsVIHALSNEQDMRRMGSLATNLPITYSAMLIGSLSLAG 392
Cdd:COG1008 307 SVSHMGFVLLGIFaLNPLGLQgaVLQMVSHGLITAALFLLVG-VLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLG 385
|
410
....*....|....
gi 385153535 393 FPFLTGFYSKDLII 406
Cdd:COG1008 386 LPGTSGFVGEFLVL 399
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
3-406 |
2.06e-29 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 122.35 E-value: 2.06e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 3 LLIVVLPLVGTLATGLGGRWLGRKGANVFSTVCVFMClffSLIAFFEVglcgvpcymsvgtwISSGALKISWGFLF-DSL 81
Cdd:PRK06458 8 ALLLLIPLLASLLLFALRKRRLVATLNVLGITLTLIL---ALWLVFTV--------------PDAGEIFAAGLWFFiDDL 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 82 TTTMLVVITSISSLVHLYSIQYMEYDPHCPR--------FMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINF 153
Cdd:PRK06458 71 NVFFLALIGVVGFLTSLYSIGYMRHEVEHGElspvtlrlYYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLSSALLVGI 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 154 WYTRlCANQAAIKALVVNRVGdlgLSLGIFSIFYLFGSVDYELVF-SLASLYKDYNVHFLGFSINFLTLIGFFLLIGAVG 232
Cdd:PRK06458 151 YRTR-ASLEAAWKYIIICSVG---VAFALFGTILVYANAATVMGDgEMAILWTELLKHASLLDPTLMKLAFVFLLIGFGT 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 233 KSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAgVFLIVRCSPIIDLSSNILF---LITIIGSSTAFFASIVGVFQNDI 308
Cdd:PRK06458 227 KVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDAAIGSDFpgrLLLIFGLLSVLVAAFFLLRQRDI 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 309 KRVIAYSTCSQLGYMVFACGL--SYYNIS-MFHLVNHAFFKALLFLSAGSVIHAlSNEQDMRRMGSLATNLPITYSAMLI 385
Cdd:PRK06458 306 KRLFAYSSIEHMGLIAFALGIggPLGIFAaLLHMLNHSLTKSAIFFASGNVLQK-YGTRDINVIRGLLKVSPLTGWGLML 384
|
410 420
....*....|....*....|.
gi 385153535 386 GSLSLAGFPFLTGFYSKDLII 406
Cdd:PRK06458 385 GALAIAGMPPFGVFISEFLIL 405
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
4-407 |
4.92e-29 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 122.41 E-value: 4.92e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 4 LIVVLPLVGTLATglggrWLGRKGANVFSTVCVFMCLFFSLIAFFevglcGVPCYMSVGTWISSGALKI-------SWGF 76
Cdd:PRK08668 5 LLLLTPLIGSVLA-----YLLKKINEKIGVIGNALPLLFLIKLYF-----TLKVGTGEKLTLFFGGFKLtftlthlSWFF 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 77 LFDSLTTTMLVVITSISSLVHLYSIQYMEYdphcprFMSFLEIFTFFMivlvtADNFVQMFLGWEGVGLASYLLINFWYT 156
Cdd:PRK08668 75 AMISLLVIFSVAFFMVSEKTKNDAYFNMFA------LMSLAGVLGVFL-----ANDLLTLYIFWEIMTFSSFMMVPMGKK 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 157 RlcANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYELVfsLASLYKDYnvhflgfSINFLTLIGFFLLIGAVGKSAQ 236
Cdd:PRK08668 144 E--SRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADI--SQGLINDT-------STGFALIVFLFLLAFGVAKAGI 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 237 LGLHTWLPDAM-EGPTPVSALIHAAtMVTAGVFLIVRCSPIIdLSSNIL-------------FLITIIGSSTAFFASIVG 302
Cdd:PRK08668 213 FPLHVWAPDAYsEAPQSFSAVLSGQ-LSKLGAYGFLLVLYVL-PGTKLFsefgtyrgvplfnYILAWLGNISIIVGTLMA 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 303 VFQNDIKRVIAYSTCSQLGYMVFACGLSY---YNISMFHLVNHAFFKALLFLSAGSVIHAlSNEQDMRRMGSLATNLPIT 379
Cdd:PRK08668 291 ILQEDIKKLIAYSSVANGGYILVGLGLGTslgFAGGLFHVFNHALFKGLFFLIFAAVIYR-TGTTKISEMGGLIEKMPFT 369
|
410 420
....*....|....*....|....*...
gi 385153535 380 YSAMLIGSLSLAGFPFLTGFYSKDLIIE 407
Cdd:PRK08668 370 FAMYLVAIISLAGIPPMSGFASKWLIFE 397
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
76-407 |
9.04e-29 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 121.76 E-value: 9.04e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 76 FLFDSLTTTMLVVITSISSLVHLYSIQYMEYDPHCPR---FMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLIN 152
Cdd:PRK08667 73 FHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVM 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 153 FWYTRLCANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYELvfslaslykdynvhfLGFSINFLTLIGFFLLIGAVG 232
Cdd:PRK08667 153 NDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSP---------------LGASAGILSLVFLLLFLGFGI 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 233 KSAQLGLHTWLPDAMEG-PTPVSALIhAATMVTAGVFLIVRCspIIDLSSNIL---FLITIIGSSTAFFASIVGVFQNDI 308
Cdd:PRK08667 218 KAGIIPFHKWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRF--LMDVLSPELwwgVLILLAGSISALLGVIYALKEHDL 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 309 KRVIAYSTCSQLG--------YMVFAC-GLSYYNI-----SMFHLVNHAFFKALLFLSAGSVIHAlSNEQDMRRMGSLAT 374
Cdd:PRK08667 295 KGLLAYSSIENIGiilmgiglYVIFGVyGLDTLALlalggALFHSLNHALFKSLLFLTAGSVVHA-TGTRNIEKMGGLVK 373
|
330 340 350
....*....|....*....|....*....|...
gi 385153535 375 NLPITYSAMLIGSLSLAGFPFLTGFYSKDLIIE 407
Cdd:PRK08667 374 LMPYTSALFLVGAVSIAALPPFNGFASELLLYE 406
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
128-406 |
7.17e-28 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 118.84 E-value: 7.17e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 128 VTADNFVQMFLGWEGVGLASYLLInfWYTRlcaNQAAIKA----LVVNRVGDLGLSLGIFSIFYLFGSVDYELVFSLASL 203
Cdd:PRK12668 110 VFAGDLLTLFVFWELMAFTSTFLV--WARG---TKAAVRAgfryLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGT 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 204 YkdynvhflgfsiNFLTLIGFFLligavgKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLssni 283
Cdd:PRK12668 185 A------------AWLILIGFGV------NAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTEL---- 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 284 lfLITIiGSSTAFFASIVGVFQNDIKRVIAYSTCSQLGYMVFACGLSY---YNISMFHLVNHAFFKALLFLSAGSVIHAL 360
Cdd:PRK12668 243 --LIYI-GAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTalaINGAVAHAFNHILYKGLLFMSAGAVLYRT 319
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 385153535 361 SnEQDMRRMGSLATNLPITYSAMLIGSLSLAGFPFLTGFYSKDLII 406
Cdd:PRK12668 320 G-TEKLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMII 364
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
36-454 |
1.17e-26 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 114.59 E-value: 1.17e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 36 VFMCLFFSLIAFFEVGLCGVPCYMSVGTWiSSGALKISWGFLFDSLTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMS 115
Cdd:MTH00063 2 VLLVSLLLCLLIFFLFLVGVSSSVSLNFL-SFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 116 FLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLCAnQAAIKALVVNRVGDLGLslgifsiFYLFGSVDYe 195
Cdd:MTH00063 81 LIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSL-RASVVTLVSSRFGDVCL-------FLLIGLSCW- 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 196 lvfslaslykdynvhflGFSINFLTLIGFFLLIGAvgKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSP 275
Cdd:MTH00063 152 -----------------GGSGSFLCCLFFFLIVFT--KSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDY 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 276 IIDLSSNILF-----LITIIGSSTAFFasivgvFQNDIKRVIAYSTCSQLGYMVFACGLSYYNISMFHLVNHAFFKALLF 350
Cdd:MTH00063 213 LLGFSWLSIFfsvllLLTIFITGVSSL------FFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLF 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 351 LSAGSVIHALSNEQD--MRRMGSLATNLPITYSAMLIgsLSLAGFPFLTGFYSKDLIieitqISYYSNLQINFGVfaCWL 428
Cdd:MTH00063 287 MLVGDVMSGSGGSQSsnCVYSSILYGSWNLFYLFLLV--LGLSGVPFIGVFFSKHFL-----LSSFSSVVFNVSL--LLV 357
|
410 420
....*....|....*....|....*.
gi 385153535 429 ANISVFFTSFYTFRLLFLTFIKNSNN 454
Cdd:MTH00063 358 VILCVFLSYLYSFRLCLILFGVKSSL 383
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
75-453 |
1.83e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 113.37 E-value: 1.83e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 75 GFLFDSLTTTMLVVITSISSLVHLYSIQYME--YDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLIN 152
Cdd:PRK06589 78 GLHLEPLGLIFLLLIGFLWICALLYTPKYLAinNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIG 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 153 FWYTRLCANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYElvfSLASLYKDYnvhflgfsinflTLIGFFLLIGAVG 232
Cdd:PRK06589 158 HTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFV---SGGLFSKNQ------------SIILLLMFIYGIA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 233 KSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILFL------ITIIGSSTAFFASIVGVFQN 306
Cdd:PRK06589 223 KTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIfaefnwLIFIPIVSIFYSSLKALKTD 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 307 DIKRVIAYSTCSQLGY-MVFACGLS--YYNISMFHLVNHAFFKALLFLSAGSvIHALSNEQDMRRMGSLATNLPITYSAM 383
Cdd:PRK06589 303 NIKKILAYSTISQLSLaLLSAFILTpkALGAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFII 381
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 385153535 384 LIGSLSLAGFPFLTGFYSKDLIIEitqiSYYSNLQINFGVFACWLANISVFFTSFYTFRLL----FLTFIKNSN 453
Cdd:PRK06589 382 SISSLSLIGIPIFSGFISKFLILL----AASEQNQPWLSIIVMLVVIASSILSALYLLKILssiyKPSLSENSF 451
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
76-402 |
3.23e-26 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 112.52 E-value: 3.23e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 76 FLFDSLTTTMLVVITSISSLVHLYSIQYME-YDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFW 154
Cdd:COG1007 66 FVVDGFALFFKLLILLAALLVLLLSRDYLErRGLLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 155 YTRLCANQAAIKALVvnrvgdLG-LSLGIF----SIFYLF-GSVDY-ELVFSLASLYKDYNVHFLGFsinFLTLIGFFLL 227
Cdd:COG1007 146 RDDRRSSEAALKYFL------LGaLSSGFLlygiSLLYGAtGSLNLaGIAAALAAGGANSPLLLLGL---VLVLAGLAFK 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 228 IGAVgksaqlGLHTWLPDAMEG-PTPVSALIHAATMVtAGVFLIVR--CSPIIDLSSNILFLITIIGSSTAFFASIVGVF 304
Cdd:COG1007 217 LSAV------PFHMWTPDVYEGaPTPVTAFLATAPKI-AAFAALLRllVEAFPGLAADWQLLLAVLAVLSMTVGNLAALA 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 305 QNDIKRVIAYSTCSQLGYM---VFACGLSYYNISMFHLVNHAFFKALLFLSAGSVIHALSNEQDMRRMGSLATNLPITYS 381
Cdd:COG1007 290 QTNVKRMLAYSSIAHAGYLllgLAAGTPLGVSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLAL 369
|
330 340
....*....|....*....|.
gi 385153535 382 AMLIGSLSLAGFPFLTGFYSK 402
Cdd:COG1007 370 AMTIFLLSLAGIPPTAGFFGK 390
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
4-406 |
3.04e-25 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 109.86 E-value: 3.04e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 4 LIVVLPLVGTLATGLGGRWlgrkGANVFSTVCVFMCLFFSLIA---FFEVGLCGVPCYMSVGTWISSGALKISWGflfdS 80
Cdd:PRK08377 7 LLIALPLISAFFVPVIKGI----GKSAVRYYLILITLLQTGIAgwvFMEVYTTGKPIIIMAGGWKPPVGINLYIG----P 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 81 LTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFvQMFLGWEGVGLASYLLINFWYTRLCA 160
Cdd:PRK08377 79 FAALFVLIIAIVSFIMSIFSLKAVEVEPIDKYAMLFLLLMLGATGMIATGDIF-NLFVFMEITAITAYALTAYNKTGEAA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 161 nQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYELVFSLASLYKDYnvhflgfsinfLTLIGFFLLIGAVGKSAQL-GL 239
Cdd:PRK08377 158 -EASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGTIDPT-----------VAQVGLALLIFGLAVEAELfPL 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 240 HTWLPDAMEG-PTPVSALIhAATMVTAGVFLIVRCSPIIDLS---SNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYS 315
Cdd:PRK08377 226 NAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNAngwSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYS 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 316 TCSQLGYMVFACGL---SYYNISMFHLVNHAFFKALLFLSAGSVIHALSNEQdMRRMGSLATNLPITYSAMLIGSLSLAG 392
Cdd:PRK08377 305 SIGQVGMIALALALgtqAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVG 383
|
410
....*....|....
gi 385153535 393 FPFLTGFYSKDLII 406
Cdd:PRK08377 384 IPLFNVFWSKFRII 397
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
224-407 |
1.13e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 107.73 E-value: 1.13e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 224 FFLLIGAVG-KSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDlssNILFLITIIGSSTAFFASIVG 302
Cdd:PRK07234 187 FALIALGLLvKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVP---GLDLIVRIFGVGTALLGVLFA 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 303 VFQNDIKRVIAYSTCSQLGYMVFACglsyyNISMFHLVNHAFFKALLFLSAGsVIHALSNEQDMRRMGSLATNLPITysa 382
Cdd:PRK07234 264 LLEKDLKRMLAFSTISQLGFILAAP-----LVGGLYALAHGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIPLT--- 334
|
170 180
....*....|....*....|....*
gi 385153535 383 mlIGSLSLAGFPFLTGFYSKDLIIE 407
Cdd:PRK07234 335 --MASFSIAGFPLLAGFVSKVLTLK 357
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-402 |
1.44e-23 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 104.52 E-value: 1.44e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 1 MYLLIVVLP----LVGTLATGLGGRWLGRKGANVFSTVCVFMCLFFSLIAFFevglcgvpcYMSVGTWISSGALKIswgf 76
Cdd:PRK05777 5 SLNLILLLPelilLGAAVVLLLIDAFVRRHSRRATLAVLALLLALVALLFVL---------GAAGGGTAFGGMLVV---- 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 77 lfDSLTTTMLVVITSISSLVHLYSIQYMEyDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYT 156
Cdd:PRK05777 72 --DGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRD 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 157 RLCANQAAIKALVvnrVGDL--GLSLGIFSIFYLF-GSVDYELVFSLASLYKDYNVHFLgFSINFLtLIGFFLLIGAVgk 233
Cdd:PRK05777 149 RRRSLEAAIKYFV---LGALasGFLLYGMSLLYGAtGSLSFAGIAKALADGSGNSLLLL-FGLVFL-LVGLAFKLSAV-- 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 234 saqlGLHTWLPDAMEG-PTPVSALIHAATMVTA-GVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRV 311
Cdd:PRK05777 222 ----PFHMWTPDVYEGaPTPVTAFLATAPKIAAfAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRL 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 312 IAYSTCSQLGYM---VFACGLSYYNISMFHLVNHAFFKALLFLSAGSVIHALSNEQDMRRMGSLATNLPITYSAMLIGSL 388
Cdd:PRK05777 298 LAYSSIAHAGYLlvgLAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFML 377
|
410
....*....|....
gi 385153535 389 SLAGFPFLTGFYSK 402
Cdd:PRK05777 378 SLAGIPPTAGFWGK 391
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
4-406 |
1.26e-18 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 89.23 E-value: 1.26e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 4 LIVVLPLVGTLATGLGGRwLGRKGANVFSTVCVFMCLFFSLIAFFEVGLCGVPCYMS-VGTWISsgALKISWGFLFDSLT 82
Cdd:TIGR01972 3 LLIFLPLIGALLILLLPS-NKDGKARWIALVVALATLLLSLLLLFQFDPTGSGFQFTeDIPWIP--ALGISYHLGVDGIS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 83 TTMLVVitsiSSLVHLYSIQYMEYDPHCPR--FMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFW--YTRL 158
Cdd:TIGR01972 80 LLLVLL----TALLTLLAILASWESIQKRVkeFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWggPNRI 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 159 canQAAIKALVVNRVGDLGLSLGIFSIFYLFGsvdyeLVFSLASLYKdynvHFLGFSINFLTLIGFFLLIGAvgKSAQLG 238
Cdd:TIGR01972 156 ---YAAMKFFLYTLAGSLLMLLAILGLYFLGG-----GTFDLLELLN----LPLPFGVQTWLFLAFFIAFAV--KVPLFP 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 239 LHTWLPDAM-EGPTPVSALIHAATMVTAGVFLIVRCSPII-DLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYST 316
Cdd:TIGR01972 222 LHTWLPDAHvEAPTAGSVILAGVLLKMGTYGFLRFNLPLFpDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSS 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 317 CSQLGYM---VFACGLSYYNISMFHLVNHAFFKALLFLSAGsVIHALSNEQDMRRMGSLATNLPITYSAMLIGSLSLAGF 393
Cdd:TIGR01972 302 ISHMGFVllgIFSFNELGISGAVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGL 380
|
410
....*....|...
gi 385153535 394 PFLTGFYSKDLII 406
Cdd:TIGR01972 381 PGTSGFVGEFLIL 393
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
50-357 |
4.40e-18 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 87.78 E-value: 4.40e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 50 VGLCGVPCYMSVGTWISSGALKISWGFLFDSLTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVT 129
Cdd:PRK08601 42 IGILALPSLVALLGLIGANGDVVVGPWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 130 ADNFVQMFLGWEGVGLASYLLINFWYTRLCANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYELVFSLASLykdynv 209
Cdd:PRK08601 122 SGDLRLMALCWGATLLGLTLLIGLNKGWKVAREAAKISGMLFLISWLALALAIVWLFIATGEWQLTSVLSNENL------ 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 210 hfLGFSINFLTLIGFFLLIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAAtMVTAGVFLIVRCSPII--DLSSNILFLI 287
Cdd:PRK08601 196 --AQLGTWEKTGINLLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFhdDIAQILLLIF 272
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 288 TIIGSSTAFFASIVgvfQNDIKRVIAYSTCSQLGYMVFACGLSYYNISMFHLVNHAFFKALLFLSAGSVI 357
Cdd:PRK08601 273 ASISVLIGTGISLV---QVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
4-406 |
5.54e-18 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 87.57 E-value: 5.54e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 4 LIVVLPLVGTLATGLGGRwLGRKGANVFSTVCVFMCLFFSLIAFFEVGLcGVPCYMSV--GTWISSGALKISWGFlfDSL 81
Cdd:PRK05846 8 LLIFLPLIGGLLVLLTER-FGARLARWIALIGTLLTLLLSLVLWIGFDS-SNAGFQFVekHPWIPRFGISYHLGV--DGI 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 82 TTTMLVVITSISSLVHLYSIQYMEYDPHcpRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWyTRLCAN 161
Cdd:PRK05846 84 SLLLVVLTALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVW-GGKNRI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 162 QAAIKALVVNRVGDLGLSLGIFSIFYLfgSVDYELVFSLASLYKdynvhfLGFSINFLTLIGFFLLIGAVGKSAQLGLHT 241
Cdd:PRK05846 161 YAATKFFLYTLLGSLLMLVAIIYLVVV--YYNATGTFDIADLLN------LPLPPGVQYWLFLAFFIAFAVKMPMFPLHT 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 242 WLPDAM-EGPTPVSaLIHAATMVTAGVFLIVR-CSPI-IDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYSTCS 318
Cdd:PRK05846 233 WLPDAHvQAPTAGS-VLLAGILLKMGAYGLLRfSLPLfPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSIS 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 319 QLGYMV---FACGLSYYNISMFHLVNHAFFKALLFLSAGSVIHALSNEqDMRRMGSLATNLPITYSAMLIGSLSLAGFPF 395
Cdd:PRK05846 312 HMGFVTlgiFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTR-DIADYGGLAKVMPVLAAFFLFFAMASLGLPG 390
|
410
....*....|.
gi 385153535 396 LTGFYSKDLII 406
Cdd:PRK05846 391 TSGFVGEFLIL 401
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
172-399 |
1.07e-17 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 86.80 E-value: 1.07e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 172 RVGDLGLSLGIFSIFYLFGSVDYELVFSLASLYKdynvhfLGFSINFLTLIGFFLLIGAVGksaqlgLHTWLPDAMEGPT 251
Cdd:PRK08042 144 RLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLP------LGSDIWLLGVIGFGLLAGIIP------LHGWVPQAHANAS 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 252 PVSALIHAATMVTAGVFLIVRCSPI---IDLSSNILFLItiIGSSTAFFASIVGVFQNDIKRVIAYSTCSQLGYMVFACG 328
Cdd:PRK08042 212 APAAALFSTVVMKIGLLGILTLSLLggnAPLWWGVALLV--LGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLG 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 329 LSYYNIS--------------MFHLVNHAFFKALLFLSAGSVIHAlSNEQDMRRMGSLATNLPITYSAMLIGSLSLAGFP 394
Cdd:PRK08042 290 AGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALP 368
|
....*
gi 385153535 395 FLTGF 399
Cdd:PRK08042 369 PLNGF 373
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
76-409 |
4.30e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 84.62 E-value: 4.30e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 76 FLFDSLTTTMLVVITSISSLVHLYSIQYMEYDphcpRFMSFLEIFTFFMIVLV-----TADNFvQMFLGWEGVGLASYLL 150
Cdd:PRK07691 73 FVADMFAALLVLTSSIITFLVILYSFQTIGIE----RERYYYYPSVLFMLAGVngaflTGDIF-NLFVFFEVMLMASYVL 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 151 INFWYTRLcANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDY-ELVFSLASLYKDYNvhflgfsiNFLTLIGFFLLIG 229
Cdd:PRK07691 148 IVIGGTKI-QLRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMaDISVKIAELSAGQT--------GLITVVAILFLFV 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 230 AVGKSAQLGLHTWLPDAMEGP-TPVSALIhAATMVTAGVFLIVRCSPII--DLSSNILFLITIIGSSTAFFASIVGVFQN 306
Cdd:PRK07691 219 FATKAGLFPLYFWLPGSYYAPpIAIAALF-GALLTKVGVYAIARTFTLFfsHDTSFTHYLILILALLTIIFGVIGAVAYF 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 307 DIKRVIAYSTCSQLGYMVFacGLSYYNIS-----MFHLVNHAFFKALLFLSAGSVIHaLSNEQDMRRMGSLATNLPITYS 381
Cdd:PRK07691 298 DIKKIIIYNIMIAVGVILV--GVAMMTESgmigaIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGW 374
|
330 340
....*....|....*....|....*...
gi 385153535 382 AMLIGSLSLAGFPFLTGFYSKDLIIEIT 409
Cdd:PRK07691 375 MFFIAALSLAGIPPLSGFYGKFFIVEGT 402
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
64-114 |
2.06e-15 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 70.53 E-value: 2.06e-15
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 385153535 64 WISSGALKISWGFLFDSLTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFM 114
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-402 |
3.23e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 78.62 E-value: 3.23e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 3 LLIVVLPLVGTLATGLGGRwlgRKGANVFSTVCVFMCLFFSLIAFFEVGLCGVPCYmSVGTWISSGALKISwgflFDSLT 82
Cdd:PRK12662 7 ILQVIIPLLSAVVCALLKN---RKLVKIISCIVVAVSFFIALVLFVQVYSGGVIKY-SLGGWGPPYGIELR----VDILS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 83 TTMLVVITSISSLVHLYSIQYMEYD---PHCPRFMS-FLEIFTFFMIVLVTADNF-VQMFLgwEGVGLASYLLINFWYTR 157
Cdd:PRK12662 79 ATMLVLVNFIAVMSVLYGIYPNRKEisvNKIPSFYSaFLLCLGGLLGILVSNDVFnIYVFL--EISSISSYVLVAMGRDK 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 158 lCANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYELVFSLASLYKDYNVHFLGFsinfltligFFLLIGAVGKSAQL 237
Cdd:PRK12662 157 -KALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGV---------LFIMVGLFIKAALF 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 238 GLHTWLPDAM-EGPTPVSALIhAATMVTAGVFLIVRCspIIDLSSNILFLIT--------IIGSSTAFFASIVGVFQNDI 308
Cdd:PRK12662 227 PFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRI--VYDVFKANFVFTTlpfnnvfmILAALAIVFGSVLAILSKDI 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 309 KRVIAYSTCSQLGYMVFACGL-SYYNIS--MFHLVNHAFFKALLFLSAGSVIHALSNeQDMRRMGSLATNLPITYSAMLI 385
Cdd:PRK12662 304 KRIFAYSSISHIGYIILAVSLnTYYGLAaaVAYIVNHSIVKSALFMVSGSISYHFGT-TKLEDCLNLWKSMPKITLAFVL 382
|
410
....*....|....*..
gi 385153535 386 GSLSLAGFPFLTGFYSK 402
Cdd:PRK12662 383 LSLSLIGMPPTSGFVAK 399
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-402 |
2.55e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 76.16 E-value: 2.55e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 4 LIVVLPLVGTLATGLGGRWlgRKGANVFSTVCVFMCLFFSLIAFFEVGLCGvPCYMSVGTWISSgalkisWG--FLFDSL 81
Cdd:PRK12665 7 LPVLLPLLAAALTLVLGRR--PRAQRAISLLALSAVLVLSAVLLYLVDRDG-TQAVQLGGWDAP------IGitLVVDRL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 82 TTTMLVVITSISSLVHLYSI-QYM-EYDPHCPrfmsfLEIF--TFFMIV------LVTADNFvQMFLGWEGVGLASYLLI 151
Cdd:PRK12665 78 SALMLVVSSVVLLAVLVYAIgQGIrDGDEEQP-----VSIFlpTYLILVagvsnaFLAGDLF-NLYVGFEILLVASYVLL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 152 NfwytrLCANQAAIKA----LVVNRVGDLGLSLGIFSIFYLFGSVDyelvfsLASLykdyNVHFLGFSINFLTLIGFFLL 227
Cdd:PRK12665 152 T-----LGATAARVRAgvtyVMVSMVSSLLFLIGIALVYAATGTLN------MADL----AVRLDELPSGTRTALFAVLL 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 228 IGAVGKSAQLGLHTWLPDAM-EGPTPVSAlIHAATMVTAGVFLIVRCSPII---DLSSNILFLItiigsstAFFASIVGV 303
Cdd:PRK12665 217 VAFGIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLfpgGGLDTLLMVV-------ALLTMVVGI 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 304 F----QNDIKRVIAYSTCSQLGYMVFACGLSY---YNISMFHLVNHAFFKALLFLSAGsVIHALSNEQDMRRMGSLATNL 376
Cdd:PRK12665 289 LgaiaQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKAS 367
|
410 420
....*....|....*....|....*.
gi 385153535 377 PITYSAMLIGSLSLAGFPFLTGFYSK 402
Cdd:PRK12665 368 PLLAVLFFVPALNLGGIPPFSGFIGK 393
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
86-407 |
3.03e-13 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 72.29 E-value: 3.03e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 86 LVVITSISSLVHLYSIQYMEydphcprFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLCANQAAI 165
Cdd:TIGR01770 84 LLTFFFALSYLSKEKINKFE-------FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGL 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 166 KALVVNRVGDLGLSLGIFSIFYLFGSVDYELVFSlaslykdyNVHFLGFSINFLTLIGFFLLIGAVGKSAQLGLHTWLPD 245
Cdd:TIGR01770 157 KYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLL--------FLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPD 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 246 AMEG-PTPVSALIHAATMVTA-GVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYSTCSQLGYM 323
Cdd:TIGR01770 229 VYEGaPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYI 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 324 VFACGLSYYNiSMFHLVNHAFFKALLFLSAGSVIHALSNEQD-----MRRMGSLATNLPITYSAMLIGSLSLAGFPFLTG 398
Cdd:TIGR01770 309 LIGLLAGTLE-GIKAVLFYIFIYALMSLGAFGVLSLLRSYKDewieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAG 387
|
....*....
gi 385153535 399 FYSKDLIIE 407
Cdd:TIGR01770 388 FFGKFYVFF 396
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
119-444 |
2.01e-12 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 70.06 E-value: 2.01e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 119 IFTFFMIVLVTAD-------NFVQMFLGWEGVGLASYLLINFW--YTRLcanQAAIKALvvnrvgdlgLSLGIFSIFYLF 189
Cdd:PRK12561 88 LFYFLMLVLYSAQigvflaqDLLLFFLMWELELVPVYLLISIWggQKRL---YAATKFI---------LYTALASIFILV 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 190 GSVDYEL-----VFSLASL-YKDYnvhflGFSINFLTLIGFflLIGAVGKSAQLGLHTWLPDAM-EGPTPVSalihaatM 262
Cdd:PRK12561 156 AGLALALsgdtfTFDLAELgAKSY-----PLALELLLYAGF--LIAFGVKLPIFPLHTWLPDAHgEASAPVS-------M 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 263 VTAGVFLI------------------VRCSPIIdlssNILFLITIIGSSTAFFAsivgvfQNDIKRVIAYSTCSQLGYMV 324
Cdd:PRK12561 222 ILAGVLLKmggyalirfnvqmlpdahVYFAPAL----AILGVVNIIYGALNAFA------QDNVKRRLAYSSVSHMGFVL 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 325 FacGLSYYN---IS--MFHLVNHAFFKALLFLSAGSV---IHALSneqdMRRMGSLATNLPITYSAMLIGSLSLAGFPFL 396
Cdd:PRK12561 292 L--GIAAFTdlgISgaMLQMISHGLIAAALFFLTGVTyerTHTLS----IPNMGGLAKVMPKTFALFTASSMASLALPGM 365
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 385153535 397 TGFYSKDLI-IEITQISYYSNLqinFGVFACWLANISVFFTSFYTFRLL 444
Cdd:PRK12561 366 SGFVSELTVfLGITSSDVYSST---FRTITILLAAVGLILTPIYLLSML 411
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
220-453 |
1.12e-11 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 67.67 E-value: 1.12e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 220 TLIGFFLLigAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPII-DLSSNIL-FLITIIGSSTAFF 297
Cdd:PRK12663 208 TIALLFLL--AFGMKAALFPFMWLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfPQERELLhPLLATMAAITMVI 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 298 ASIVGVFQNDIKRVIAYSTCSQLGYMVFACGL---SYYNISMFHLVNHAFFKALLFLSAGSVIhALSNEQDMRRMGSLAT 374
Cdd:PRK12663 286 GALGALAYKDIRRIAGYQVISSIGFILLGLALgtpAGINGAIFYLVHDMVVKTALFLIAGSLV-RLTGYRSLQYLGGLYR 364
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 385153535 375 NLPITYSAMLIGSLSLAGFPFLTGFYSKDLIIEitqisyySNLQINFGVFACwLANISVFFTSFYTFRLLFLTFIKNSN 453
Cdd:PRK12663 365 KEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQ-------GALDNGAYILLA-LMLITSLITMYSLFRIFFLAYWGDKD 435
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
130-405 |
1.75e-11 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 67.03 E-value: 1.75e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 130 ADNFVQMFLGWEGVGLASYLLINFWyTRLCANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYElvfslaslYKDYNV 209
Cdd:PRK06473 126 AQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFD--------YEPLRS 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 210 HFLGFSINFLTLIGffLLIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIhAATMVTAGVFLIVR--CSPIIDLSSNILFL 286
Cdd:PRK06473 197 HTLPLSTQLLLLAP--ILVGFGIKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRfgVGLFPEAWVYLAPW 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 287 ITIIGSSTAFFASIVGVFQNDIKRVIAYSTCSQLGYMVFACGLSY---YNISMFHLVNHAFFKALLFLSAGsVIHALSNE 363
Cdd:PRK06473 274 LATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATplsILAAVFQMISHGLISALLFLLVG-VVYKKTGS 352
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 385153535 364 QDMRRMGSLAT---NLPITYSAMLIGSLSLAGFPFLTGFYSKDLI 405
Cdd:PRK06473 353 RDVDVLRGLLNperGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
1-399 |
3.98e-11 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 65.89 E-value: 3.98e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 1 MYLLIVVLPLVGTLATGLGGRWLGRKGANVFSTVCVFMCLFFS--LIAFFEVGLCGVPcYMSVGTWISSGALKISWGFlf 78
Cdd:PRK07363 1 MLSVLLWLPILGAIIIGFFPGNLPSARLRQITLVFAVLVLAWSlfLLTQFDLSDPGMQ-FQEYLPWNEPLGLSYSLGV-- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 79 DSLTTTMLVvITSISSLVHLYSIqymEYDPHCPR-FMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTR 157
Cdd:PRK07363 78 DGLSLPLLV-LNSLLTWIAIYSI---GENTERPRlYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 158 LCAnQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYelvfslaslykDYNVHFL-GFSINFLTLIGFFLLIGAVGKSAQ 236
Cdd:PRK07363 154 KRG-YASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSF-----------DYDAISTqNLSLNTQLILLTGLLLGFGIKIPL 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 237 LGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVR--CSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAY 314
Cdd:PRK07363 222 VPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRfgLQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAY 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 315 STCSQLGYMVFAC----GLSYYNiSMFHLVNHAFFKALLFLSAGsVIHALSNEQDMRRMGSLAT---NLPITYSAMLIGS 387
Cdd:PRK07363 302 SSIGHMGYILVAAaagtQLSLLG-AVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMNpirGLPLTSALLVLAG 379
|
410
....*....|..
gi 385153535 388 LSLAGFPFLTGF 399
Cdd:PRK07363 380 MASAGIPGLVGF 391
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
209-414 |
5.92e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 65.16 E-value: 5.92e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 209 VHFLGFSINFLTLIGFFLLIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIhAATMVTAGVFLIVRCSPIIDLS------S 281
Cdd:PRK08676 195 AHASLLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSgaaeqfS 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 282 NILFLITIIGSSTAFFASIVgvfQNDIKRVIAYSTCSQLGYMVFACGLSY---YNISMFHLVNHAFFKALLFLSAGsVIH 358
Cdd:PRK08676 274 NVLIGLGIFSIAVAAFSMLS---QRNLKKLIAFSSIEHMGLMLLGIGIGTplaLFWMLFHMLAHSLVKSGLFFSAG-ILH 349
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 385153535 359 ALSNEQDMRRMGSLATNLPITYSAMLIGSLSLAGFPFLTGFYSK-DLIIEITQISYY 414
Cdd:PRK08676 350 RQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKfFILLQLGGISVW 406
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
89-445 |
6.70e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 61.86 E-value: 6.70e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 89 ITSISSLVHLYSIQYMeydphCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLCANQAAIKAL 168
Cdd:MTH00226 114 IVPCSILISWHSVKYL-----TKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFF 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 169 VVNRVGDLGLSLGIFSIFYLFGSVDYELVFSLASLYKDYNVHFLgfsinfltLIGFFLLIGAvgKSAQLGLHTWLPDA-M 247
Cdd:MTH00226 189 FYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSEQTQKWI--------FLGIFLAMAV--KIPIFPFHIWLPKAhV 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 248 EGPTPVSALIhAATMVTAGVFLIVRCS-PIIDL-SSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYSTCSQLGYMVF 325
Cdd:MTH00226 259 EAPVAGSVLL-AGILLKLGGYGLVRLSwPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSI 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 326 AcgLSYYNI-----SMFHLVNHAFFKALLFLSAgSVIHALSNEQDMRRMGSLATNLPITYSAMLIGSLSLAGFPFLTGFy 400
Cdd:MTH00226 338 T--LVTHDIigltgSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF- 413
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 385153535 401 skdlIIEITQISYYSNLQINFGVFACWLANISVFFTSFYTFRLLF 445
Cdd:MTH00226 414 ----IGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTF 454
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
75-402 |
1.01e-09 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 61.17 E-value: 1.01e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 75 GFLFDSLTTTMLVVITSISSLVHLYSIQYMEydphCPRfMSFLEIFTFFM------IVLVTADNFVQMFLGWEGVGLASY 148
Cdd:CHL00049 74 NFQTNNFNEIFQFLILLCSTLCIPLSVEYIE----CTE-MAITEFLLFVLtatlggMFLCGANDLITIFVALECLSLCSY 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 149 LLINFWYTRLCANQAAIKALVVnrvGDLGLSLGIFSIFYLFGSVDYELVFS--LASLYKDYNVHFLGFSINFltligFFL 226
Cdd:CHL00049 149 LLSGYTKKDVRSNEATMKYLLM---GGASSSILVYGFSWLYGLSGGEIELQeiVNGLINTQMYNSPGISIAL-----IFI 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 227 LIGAVGKSAQLGLHTWLPDAMEG-PTPVSALIHAATMVtAGVFLIVRCSPII--DLSSNILFLITIIGSSTAFFASIVGV 303
Cdd:CHL00049 221 TVGIGFKLSLAPFHQWTPDVYEGsPTPVVAFLSVTSKV-AASALATRIFDIPfyFSSNEWHLLLEILAILSMILGNLIAI 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 304 FQNDIKRVIAYSTCSQLGYMVFACGLSYYNISMFHLVNHAFFKALLFLSAGSVIHALS---NEQDMRRMGSLATNLPITY 380
Cdd:CHL00049 300 TQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLGTFACIVLFGlrtGTDNIRDYAGLYTKDPFLA 379
|
330 340
....*....|....*....|..
gi 385153535 381 SAMLIGSLSLAGFPFLTGFYSK 402
Cdd:CHL00049 380 LSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
137-444 |
7.49e-09 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 58.56 E-value: 7.49e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 137 FLGWEGVGLASYLLINFW--YTRLcanQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYELVfSLASlyKDynvhflgF 214
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWggKKRQ---YAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMT-ALAA--KD-------F 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 215 SINFLTLIGFFLLIGAVGKSAQLGLHTWLPDAM-EGPTPVSALIhAATMVTAGVFLIVRCSPIIDLSSNILF--LITIIG 291
Cdd:PRK02546 208 GLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHgEATAPVHMLL-AGILLKMGGYALLRMNAGMLPDAHAQFapLLIVLG 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 292 SSTAFFASIVGVFQNDIKRVIAYSTCSQLGYMVFACGlSYYNI----SMFHLVNHAFFKALLFLSAGSV---IHALSNEQ 364
Cdd:PRK02546 287 VVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIG-SFTDLgtsgAMLQMISHGLIGASLFFLVGATydrTHTLMLDE 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 365 dmrrMGSLATNLPITYSAMLIGSLSLAGFPFLTGFYSKDLIIEITQISYYSNLQinFGVFACWLANISVFFTSFYTFRLL 444
Cdd:PRK02546 366 ----MGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATSDAYTLP--FRVVVVFLAAVGVILTPIYLLSML 439
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
305-446 |
1.31e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 57.73 E-value: 1.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 305 QNDIKRVIAYSTCSQLGYMVFACGL-SYYNIS--MFHLVNHAFFKALLFLSAGSVIHaLSNEQDMRRMGSLATNLPITYS 381
Cdd:PRK06277 287 QTDYKRLLAYHAISQGGYVAAGLALgTPLGIVagIFHAINHVIYKSALFLGAGIVSY-RTKTSNLRKLGGLLPVMPVVAF 365
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 385153535 382 AMLIGSLSLAGFPFLTGFYSKDLIIEITQISYYSNLQInfgvfACWLANISVFFTSFYTFRLLFL 446
Cdd:PRK06277 366 MVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAI-----IMIIVSIGTFVSMMKAFYLIYL 425
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
64-399 |
2.03e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 57.00 E-value: 2.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 64 WISSGALKISWGFLFDSLTTTMLVVI------TSISSLVHLYSIQYMEYDphcprFMSFLEIFTFFMIVLVTADNFVQMF 137
Cdd:MTH00204 64 WIISPTLNFQWGPLVFAVDGVSLFFIllttllIPICILISWKSIKFLFKE-----FLLCLLFLEVLLIGVFSVLDLLLFY 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 138 LGWEGVGLASYLLINFWYTRLCANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYELVFSLAslykdynvhfLGFSIN 217
Cdd:MTH00204 139 ILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIK----------LPLSIQ 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 218 FLTLIGFFLLIGAvgKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILF-LITIIGSSTA 295
Cdd:MTH00204 209 KWLLVGFFLSLAV--KIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFApLIVMLSVIAV 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 296 FFASIVGVFQNDIKRVIAYSTCSQLGYM---VFACGLSYYNISMFHLVNHAFFKALLFLsAGSVIHALSNEQDMRRMGSL 372
Cdd:MTH00204 287 IYGSLTTCRQVDFKRLIAYSSVAHMGLVplgLFTHTIEGLVAAVFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGL 365
|
330 340
....*....|....*....|....*..
gi 385153535 373 ATNLPITYSAMLIGSLSLAGFPFLTGF 399
Cdd:MTH00204 366 TLTMPLFVIIMLVLSLANMGFPLSCNF 392
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
63-356 |
1.71e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 54.41 E-value: 1.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 63 TWISSGALKISWGFLFDSLTTTMLVVITSISSLVHLYSIQYMEYDphcpRFMSFLEIFTFF-MIVLVTADNFVQMFLGWE 141
Cdd:PRK06459 27 TMISSIILLITSIYEYNGVLSFFSIISTIVWILASLYSIEYDHYG----KWLSSLYILTILgMAIVLTSDNYLLFLAGWE 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 142 GVGLASYLLINFWYTRlcaNQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYELVFSLASLykdynvhfLGFSINFLTL 221
Cdd:PRK06459 103 IMTIPSYVAIALTKKN---KRPAFVFMAFGELSTVLILAGFAWAFIISGTTNFSYLPSPVPL--------ILASFGFIIK 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 222 IGFFLLIgavgksaqlgLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILF--LITIIGSSTAFFAS 299
Cdd:PRK06459 172 MGMMPFL----------VSEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFglTILAIGAFSILFGA 241
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 300 IVGVFQNDIKRVIAYSTCSQLGYMVFACGL---SYYNIS----------MFHLVNHAFFKALLFLSAGSV 356
Cdd:PRK06459 242 LYAYVSENVKGLLAFSTIENNGAILVALGLymvTKQLITsiehfslitvILYSFAHSVAKTGLFLSSGLQ 311
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
239-407 |
5.77e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 52.23 E-value: 5.77e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 239 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSsnilfLITIIGSSTAFFASIVGVFQNDIKRVIAYSTCS 318
Cdd:MTH00070 111 FHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSN-----LLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 319 QLGYMV----FACGLSYYNISMFHLVNHAFFKALLFLSAGSvihalsneqdMRRMGSLATNLPITYSAMLIGSLSLAGFP 394
Cdd:MTH00070 186 HLGWMIiiltFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTN----------INKLSSSWSKNPTLTSMMMLTLLSLGGLP 255
|
170
....*....|...
gi 385153535 395 FLTGFYSKDLIIE 407
Cdd:MTH00070 256 PTTGFIPKWLILQ 268
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
237-407 |
1.21e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 50.98 E-value: 1.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 237 LGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSsnilfLITIIGSSTAFFASIVGVFQNDIKRVIA 313
Cdd:MTH00112 106 LGLapfHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPT-----LLLTLAILSTLIGGWGGLNQTQLRKIMA 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 314 YSTCSQLGYMV----FACGLSYYNISMFHLVNHAFFKALLFLSAGSvihalsneqdMRRMGSLATNLPITYSAMLIGSLS 389
Cdd:MTH00112 181 FSSIAHLGWMIaiitYSPKLTLLTFYIYILMTTPMFLTLNTTSTKT----------LKDMMTSWTKSPTLNTTLMLTLLS 250
|
170
....*....|....*...
gi 385153535 390 LAGFPFLTGFYSKDLIIE 407
Cdd:MTH00112 251 LAGLPPLTGFMPKWLILQ 268
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
72-324 |
3.91e-06 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 49.97 E-value: 3.91e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 72 ISWGFLFDSLTTTMLVVITSISSLVHLYSIQYMEYDPHCPR--FMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYL 149
Cdd:MTH00044 53 LSLSLATDSLSSPLIILSCWLAPLSLLASINHLSNNSPNNQrtFISLIIIILTALIITFSSLELILFYIAFETTLIPTLI 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 150 LINFWYTRLCANQAAIKALVVNRVGDLGLSLGIFSIFylfgSVDYELVFSLASLYKdynvhFLGFSINFLTLIGFFLLIG 229
Cdd:MTH00044 133 LITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIY----SSSSSLSIPLSELNW-----LTSLSSNSSSIWWIFCILA 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 230 AVGKSAQLGLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLIVRCSPIIDLSS--NILFLITIIGSSTAFFASIVGVFQN 306
Cdd:MTH00044 204 FLVKMPIYGFHLWLPKAhVEAPVAGS-MILAAILLKLGGYGLIRLINLFSLPSanNISFILIVFCCWGALITSIICLRQT 282
|
250
....*....|....*...
gi 385153535 307 DIKRVIAYSTCSQLGYMV 324
Cdd:MTH00044 283 DLKALIAYSSVGHMSLVA 300
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
225-407 |
5.85e-06 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 49.01 E-value: 5.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 225 FLLIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIvrcspIIDLSSNILFLITIIGSSTAFFASIVGVF 304
Cdd:MTH00011 93 MLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSIL-----FFFTSHNILPMMTSMAAMSALAGGLGGMN 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 305 QNDIKRVIAYSTCSQLGYMVFACGLSyYNISMFHLVNHAFFKALLFLsagsvIHALSNEQDMRRMGSLATNLPITYSAML 384
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMTMISVFS-PSMAILYFMTYIIITTPLML-----LFAYLNAFSTKFNSKISSMSQTTSMSLF 241
|
170 180
....*....|....*....|...
gi 385153535 385 IGSLSLAGFPFLTGFYSKDLIIE 407
Cdd:MTH00011 242 IMLLSLGGLPPFTGFMPKLMAIE 264
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
124-406 |
6.21e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 48.87 E-value: 6.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 124 MIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLCANQAAIKALVVnrvGDLGLSLGIFSIFYLFGSVDyELVFSLASL 203
Cdd:MTH00196 6 ILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVL---GALSSGLFLFGCALLCGTTG-GLHLSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 204 YKDYNVHFLGFSInfltLIGFFLLIGAV-GKSAQLGLHTWLPDAMEG-PTPVSALIhaATMVTAGVFLIVRCspiIDLSS 281
Cdd:MTH00196 82 VLNSGQSFSSVSV----PIGYLLIIVALlFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFSILVS---IGLNV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 282 NILFLITIIgssTAFFASIVGVFQNDIKRVIAYSTCSQLGYMVFACGLSYY---NISMFHLVNHAFFKALLFlsagSVIH 358
Cdd:MTH00196 153 NILLIGGLF---SLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFesiQASLVYLFIYIIMSICVF----SIIL 225
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 385153535 359 ALSNEQDMR-RMGSLATNLPITYSAMLIGSLSLAGFPFLTGFYSKDLII 406
Cdd:MTH00196 226 ALNVYKNLIiEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL 274
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
5-402 |
6.94e-06 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 49.28 E-value: 6.94e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 5 IVVLPLVGTLATGLGGrwlGRKGANVFSTVCVFmCLFFSLIAFfevglcgvpcymsVGTWISSGALKISWGFLFDSLTTT 84
Cdd:PRK02504 20 IVILTLLGVLLVDLIG---GRTASRWLPYLAIA-GLGAALVAL-------------ALQWDNPNPISFLGSFNADNLSIA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 85 MLVVITSISSLVHLYSIQYMEYD-PHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLCANQA 163
Cdd:PRK02504 83 FRAIIALSTLVTLLMSWRYVEQSgTPLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 164 AIKALVVNrvgdlGLSLGIFsifyLFG-SVDYELvfSLASLYKDYNVHFLGFSINFLTLIGFFLLIGAVG-KSAQLGLHT 241
Cdd:PRK02504 163 ALKYLLIG-----AASSAIF----LYGsSLLYGL--SGGSTQLSAIALALITSPSLGLALALVFVIAGIAfKISAVPFHQ 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 242 WLPDAMEG-PTPVSALIHAATMvTAGVFLIVR----CSPIIDLSSNILFLITIIGSSTafFASIVGVFQNDIKRVIAYST 316
Cdd:PRK02504 232 WTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRllvtAFPSFDEQWKLLFTALAILSMV--LGNVVALAQTSMKRMLAYSS 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 317 CSQLGYMV--FACGLSYYNISM-FHLVNHAFFKALLFlsAGSVIHALSNEQD-MRRMGSLATNLPITYSAMLIGSLSLAG 392
Cdd:PRK02504 309 IGQAGFVMigLVAGTEAGYASMvFYLLAYLFMNLGAF--ACVILFSLRTGTDqISDYAGLYQKDPLLTLGLSLCLLSLGG 386
|
410
....*....|
gi 385153535 393 FPFLTGFYSK 402
Cdd:PRK02504 387 IPPLAGFFGK 396
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
212-406 |
1.47e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 47.57 E-value: 1.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 212 LGFSINFLTLIGFFLLIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIvrcsPIIDLSSNILFLITIIG 291
Cdd:MTH00144 76 IMYNLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLL----SNFLDLYWLAYLLCVIS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 292 SSTAFFASIVGVFQNDIKRVIAYSTCSQLGYMVFACGLSYYnISMFHLVNHAFFKALLFLSAGSvihalSNEQDMRRMGS 371
Cdd:MTH00144 152 VLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSW-LMWMYFLIYIVSSGFLFFSLWS-----GDSGSMKDLGS 225
|
170 180 190
....*....|....*....|....*....|....*
gi 385153535 372 LATNLPITYSAMLIGsLSLAGFPFLTGFYSKDLII 406
Cdd:MTH00144 226 LKPSYKTGLSIISLL-LSLGGLPPFLGFCSKLLVL 259
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
286-405 |
2.59e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 47.42 E-value: 2.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 286 LITIIGSSTAFFASIVGVFQNDIKRVIAYSTCSQLGYMVFACGLSY-----YNISMFHLVNHAFFKALLFLSAGSVIHAl 360
Cdd:PRK12664 203 ILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVINR- 281
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 385153535 361 SNEQDMRRMGSLaTNLPITYSAMLIGSLSLAGFPFLTGFYSKDLI 405
Cdd:PRK12664 282 TRKFNLNRVGGL-FKMSLEAMCCIIAILNMGAFPGTAGFVSKSLI 325
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
79-324 |
6.10e-05 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 45.89 E-value: 6.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 79 DSLTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRL 158
Cdd:MTH00014 58 DMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQP 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 159 CANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSvdyelvFSLASLYKDYNVHFLGFSINFLTLIGFFLligavgKSAQLG 238
Cdd:MTH00014 138 ERLQASFYLMIYTVTASLPLLMSILLIFYTNNS------LSMLMSSMEPPSIYLMNLWWLITILAFMV------KMPLYT 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 239 LHTWLPDA-MEGPTPVSALIHAATMVTAGVFLIVRCSPIIDLSSNILFLITIIGSSTAFFASIVGVFQNDIKRVIAYSTC 317
Cdd:MTH00014 206 VHLWLPKAhVEAPVAGSMILAGILLKLGGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSV 285
|
....*..
gi 385153535 318 SQLGYMV 324
Cdd:MTH00014 286 GHMGLMT 292
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
28-324 |
8.34e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 45.36 E-value: 8.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 28 ANVFSTVCVFMCLFFSLIAFFEVGlcgvpcymsvgtwissgalkISWGFLFDSLTTTMLVVITSISSLVHLYSIQYMEYD 107
Cdd:MTH00205 25 SNLLLIGLFFSSFFFSNSFLMTSF--------------------ISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 108 PHCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLCANQAAIKALVVNRVGDLGLSLGIFSIFY 187
Cdd:MTH00205 85 KNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNS 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 188 LFGSVDYELVFSLAslykdynvhflgFSINFLTLIGFFLLIGAVGKSAQLGLHTWLPDA-MEGPTpvsalihAATMVTAG 266
Cdd:MTH00205 165 LNFSLSMFFNFPLN------------FSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAhVEAPV-------SGSMILAG 225
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 385153535 267 VFL----------IVRCSPIIDLSSNILFLITIIGsstAFFASIVGVFQNDIKRVIAYSTCSQLGYMV 324
Cdd:MTH00205 226 VLLklggygliriTSMLYKLNSNFSELFFSISLWG---GVMTGMICLRQVDLKSLIAYSSVGHMGLMV 290
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
184-444 |
1.58e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 44.85 E-value: 1.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 184 SIFYLFGSVDY--------ELVFSLASLYKDYNVHFLGFSINFLtligfFLLIGAVGKSAQLGLHTWLPDAMEG-PTPVS 254
Cdd:MTH00198 260 SGFYLFGCALYfgftgnegMLGTILSATLETTNIELRQGSLGYL-----FITVAILFKLAAAPFHMWTPDVYEGaPTPTT 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 255 ALIHAATMVTAGVFLIvrcSPIIdlSSNILFLITIIgsstaffASIVGVF----QNDIKRVIAYSTCSQLGYMVFACGLS 330
Cdd:MTH00198 335 ALIAIIPKFTVYILLT---SLVI--TSKLLLSVAII-------SLVVGAFgalnQTRIKRLLAYSGIGHIGFILIGVSAG 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 331 YYN--------ISMFHLVNHAFFKALLFLSAGSVIHALSNEQD--------MRRMGS---LATNLPITYSAMLIGSLSLA 391
Cdd:MTH00198 403 TYEslqaswtyAVTYLVSALASFTVICTLEEFGTRTPTSRQRDgsfgnynlVRRLVDltiLSRGQPYIAFSLAIVFLSLA 482
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 385153535 392 GFPFLTGFYSKDLI-IEITQISYYSNLQINFGVfaCWLANISVFFTSFYTFRLL 444
Cdd:MTH00198 483 GIPPLLGFLGKWFIlVGSIKIAFSSSLSIYYLV--ALFAIICTCISAFYYIRIV 534
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
439-635 |
3.32e-04 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 42.15 E-value: 3.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 439 YTFRLLFLTFIKNSNNYRkhMDNVHESSLLILLPLILLGIASIFVGFFTkdlfvgigtpFWknaiNILPSSCSLleveFM 518
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSS--LSPINENNPIMINPIKRLAIGSIIGGSLL----------SW----LIFPKPPMM----TM 60
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 519 SHLIKWLPFILSVFGAIFAY---TINVGWLKNNIKFAYMYMFRKLAFLLSkkiywdkLYNSIIVSSLMNFGYTIsFKNID 595
Cdd:pfam06455 61 PLYLKLLALLVTILGLLLGLelsNLSNKQLKKSLNFNLHSFSGSMWFFPN-------LSHRLIPKLSLKLGQKL-AKQID 132
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 385153535 596 RGFIELLGPYGISRIIKNWSMKIIRIQTGQVTHYTFFVVF 635
Cdd:pfam06455 133 QGWSEKFGPQGIAKTLMTLSKIIQNSQKGLIKIYLLSFLL 172
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
240-452 |
6.94e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 42.23 E-value: 6.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 240 HTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRcspIIDLSSNilFLITIIGSSTAFFASIVGVFQNDIKRVIAYSTCSQ 319
Cdd:MTH00041 112 HFWFPDVLQGLPFLQGLIIATWQKIAPLILLIS---ISNLLNS--NILILCGILSVLVGGWGGLNQTQTRKILAFSSIAH 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 320 LGYMVFACGLSYyNISMFHLVNHAFFKALLFLSAGsvIHALSNeqdMRRMGSLATNLPITYSAMLIGSLSLAGFPFLTGF 399
Cdd:MTH00041 187 LGWIIITSAYSP-NASIIMFLIYIIINTSIFLIGN--NFSLST---LSHLNKLSQLNPISAFLFILSILSLGGLPPLTGF 260
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 385153535 400 YSKDLIIEI----------------TQISYYSNLQINFGVFACWLANISVFFTSFYTFRLLFLTFIKNS 452
Cdd:MTH00041 261 LNKFISLYCliqnnsilisiiliigSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYGVILS 329
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
36-337 |
7.36e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 42.45 E-value: 7.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 36 VFMCLFFSLIAFFEVGLCGVPCYMSVGTWISSGALKISWGFLFDSLTTTMLVVITSISSLVHLYSIQYMEYDPHCPRFMS 115
Cdd:MTH00163 12 IPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKNNYSNLFLF 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 116 FLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFW---YTRLcanQAAIKALVVNRVGDLGLSLGIFSIFYLFGSV 192
Cdd:MTH00163 92 LILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWgyqPERL---QAGIYLLFYTLFASLPLLVGIFYLYNNSGSL 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 193 DYelvfslaslykdynvHFLGFSINFLTLIGFFLLIGAVGKSAQLGLHTWLPDA-MEGPTpvsalihAATMVTAGVFL-- 269
Cdd:MTH00163 169 SF---------------FLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAhVEAPV-------SGSMILAGVLLkl 226
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 385153535 270 ----IVRCSPIIDLSSNIL-FLITIIGSSTAFFASIVGVFQNDIKRVIAYSTCSQLGyMVFACGLSYYNISMF 337
Cdd:MTH00163 227 ggygLLRVMSFFSKLGLKFnYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMG-LVLGGLMTFSYWGLM 298
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
40-463 |
1.18e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 41.85 E-value: 1.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 40 LFFSLIAFFevglcgvpcYMSVGTWISSGALKISWGFLFDSLTTTMLVVITS-ISSLVHLYSIQYMEYDPHCPR--FMSF 116
Cdd:MTH00206 27 FFSFLIALL---------FLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCwLLPLMFLASQNHMKNEPINRQriYITL 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 117 LEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLCANQAAIKALVVNRVGDLGLSLGIFSIFYLFGSVDYel 196
Cdd:MTH00206 98 LIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSL-- 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 197 vfslaslykdYNVHFLGFSINFLTLIGFFLLIGAVGKSAQLGLHTWLPDA-MEGPTpvsalihAATMVTAGVFL------ 269
Cdd:MTH00206 176 ----------YILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAhVEAPV-------AGSMVLAGVLLklggyg 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 270 IVRCSPIIDLSSN-ILFLITIIGSSTAFFASIVGVFQNDIKRVIAYSTCSQLGyMVFACGLSY----YNISMFHLVNHAF 344
Cdd:MTH00206 239 MMRIILILGPSTKlSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMS-LVTAGILSGspwgFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 345 FKALLFLSAGsVIHALSNEQDMRRMGSLATNLPITYSAMLIGSLSLAGFPFLTGFYSKDLIIeitqisyySNLqINFGVF 424
Cdd:MTH00206 318 VSSALFCLAN-LLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLII--------TSL-FSWSNF 387
|
410 420 430
....*....|....*....|....*....|....*....
gi 385153535 425 ACWLANISVFFTSFYTFRLLFLTFIKNSNNYRKHMDNVH 463
Cdd:MTH00206 388 TLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSS 426
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
88-321 |
2.17e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 41.19 E-value: 2.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 88 VITSISSLVHLYSIQYMeydphCPRFMSFLEIFTFFMIVLVTADNFVQMFLGWEGVGLASYLLINFWYTRLCANQAAIKA 167
Cdd:MTH00217 91 LLTPICILISWNSIKFL-----IKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYF 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 168 LVVNRVGDLGLSLGIFSIFYLFGSVDYElvfSLASLYKDYNVHFLGFsinfltlIGFFLLIGAvgKSAQLGLHTWLPDA- 246
Cdd:MTH00217 166 FFYTFIGSVFMLLGIFTLYSYAGTTDYQ---ALCCLKIEKELQYFIF-------LGFFLSLAI--KIPKIPFHIWLPQAh 233
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 385153535 247 MEGPTPVSALIhAATMVTAGVFLIVRCS-PIIDLSSNILF-LITIIGSSTAFFASIVGVFQNDIKRVIAYSTCSQLG 321
Cdd:MTH00217 234 VEAPVAGSVIL-AGVLLKLGGYGFIRFSwPLLPEASEYFSpLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMG 309
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
238-327 |
2.52e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 40.95 E-value: 2.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 238 GLHTWLPDAMegptpVSALIhAATMVTAGVFL------IVRCSPIIDLSSNILFLITII----GsstAFFASIVGVFQND 307
Cdd:MTH00124 211 GLHLWLPKAH-----VEAPI-AGSMVLAAILLklggygIIRITLLLPPLSNTLHYPFLTlalwG---ALMTSLICLRQTD 281
|
90 100
....*....|....*....|
gi 385153535 308 IKRVIAYSTCSQLGYMVFAC 327
Cdd:MTH00124 282 LKSLIAYSSVSHMGLVIAAT 301
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
239-409 |
3.40e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 40.17 E-value: 3.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 239 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPiidlsSNILfLITIIGSSTAFFASIVGVFQNDIKRVIAYSTCS 318
Cdd:MTH00135 111 LHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAP-----TNPT-LLITLGLTSTLVGGWGGLNQTQLRKILAYSSIA 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 319 QLGYMV----FACGLSYYNISMFHLVNHAFFKALLFLSAGSVIhalsneqdmrrmgSLATNLP----ITYSAMLIgSLSL 390
Cdd:MTH00135 185 HLGWMIlvlqFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKIN-------------TLATSWTkapaLTALTPLI-LLSL 250
|
170 180
....*....|....*....|
gi 385153535 391 AGFPFLTGFYSKDLII-EIT 409
Cdd:MTH00135 251 GGLPPLTGFMPKWLILqELT 270
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
218-454 |
5.84e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 39.57 E-value: 5.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 218 FLTLIGFFLLIGAVgkSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPiiDLSSNILFlitIIGSST 294
Cdd:MTH00200 89 MLGPLSETLILLAL--ALKLGLapgHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAP--ALNSNILL---LLGLLS 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 295 AFFASIVGVFQNDIKRVIAYSTCSQLGYMVFACGLSyyniSMFHLVNhaFFKALLFLSAGSVIHALSNEQDMRRMGSLAT 374
Cdd:MTH00200 162 VLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS----PNLALLY--LLLYVIITLTVFLLLNLLNSTKINSLSSSKT 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 375 NLPITYSAMLIGSLSLAGFPFLTGFYSKDLIieITQISYYsnlqiNFGVFACWLANISVFFTSFYTfRLLFLTFIKNSNN 454
Cdd:MTH00200 236 KNPILSMLLGLTLLSLGGLPPLTGFFPKWLI--LQELSKQ-----GLFIYATILLLGSLLSLFFYL-RLSYLTLLTLSPN 307
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
222-323 |
9.91e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 38.99 E-value: 9.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385153535 222 IGFFLlIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIVRCSPII----DLSSNILFLITIIGSSTAFF 297
Cdd:PRK06591 217 IGFFL-IGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIigyeTIKTAITNFIRPIALATLII 295
|
90 100
....*....|....*....|....*.
gi 385153535 298 ASIVGVFQNDIKRVIAYSTCSQLGYM 323
Cdd:PRK06591 296 APYFAYQAKNFKNIIIYSCFTQIGYV 321
|
|
| |
