|
Name |
Accession |
Description |
Interval |
E-value |
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
43-443 |
6.86e-104 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 318.18 E-value: 6.86e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 43 EEVGIYYT--SDGIADIFILLTAYLLPLSIIANWNNI--RSLLYFELILNLGVILLINFMCQDMLSFYVYFEISLAPLFI 118
Cdd:COG1008 70 PSLGISYHlgVDGISLPLVLLTALLTPLAILASWNEIkkRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYF 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 119 LIGLYGANNRDKAADYILIYTLFSSLFMLLAIGT--YEVLIGNTDYQAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVH 196
Cdd:COG1008 150 LIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILAlyFLAGALTFDIAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 197 TWLPVVHSESPLAGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSIS 276
Cdd:COG1008 230 TWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 277 HMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIVgGILYDRYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPL 356
Cdd:COG1008 310 HMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLV-GVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPG 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 357 TVNFIGELLSLTGAIGRSTILGCISAFSVLLSAAYMLKVTNRLTGGIRTPYTALTSDCTYRESLLMIALIIPTLWYGLYP 436
Cdd:COG1008 389 TSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYP 468
|
....*..
gi 391224043 437 NGIINMI 443
Cdd:COG1008 469 QPLLDLI 475
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
3-443 |
3.93e-96 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 298.27 E-value: 3.93e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 3 LIYILILAGVSIF--SRLLPTYGKGLILVASILVVL----------PTMTDWEEV---------GIYYT--SDGIADIFI 59
Cdd:PRK05846 9 LIFLPLIGGLLVLltERFGARLARWIALIGTLLTLLlslvlwigfdSSNAGFQFVekhpwiprfGISYHlgVDGISLLLV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 60 LLTAYLLPLSIIANWNNIRSLL--YFELILNLGVILLINFMCQDMLSFYVYFEISLAPLFILIGLYGANNRDKAADYILI 137
Cdd:PRK05846 89 VLTALLTPLAVLASWEEIKKRVkfYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGGKNRIYAATKFFL 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 138 YTLFSSLFMLLAI----GTYEVLIGNTDYQAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVHSESPLAGSML 213
Cdd:PRK05846 169 YTLLGSLLMLVAIiylvVVYYNATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVL 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 214 LAGVILKLAVYAIIRLIIPTLSDATVLYTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGILSNSLAGI 293
Cdd:PRK05846 249 LAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGI 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 294 NGSLILSLAHGFVSPALFIIVgGILYDRYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAIGR 373
Cdd:PRK05846 329 QGAIFQMISHGLSSAALFLLV-GVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQV 407
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 374 STILGCISAFSVLLSAAYMLKVTNRLTGGIRTPYTALTSDCTYRESLLMIALIIPTLWYGLYPNGIINMI 443
Cdd:PRK05846 408 NPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVALLLLLGVYPKPLLDVI 477
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
52-443 |
3.58e-95 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 295.31 E-value: 3.58e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 52 DGIADIFILLTAYLLPLSIIANWNNI--RSLLYFELILNLGVILLINFMCQDMLSFYVYFEISLAPLFILIGLYGANNRD 129
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESIqkRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRI 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 130 KAADYILIYTLFSSLFMLLA-IGTYEVLIGNTDYQAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVHSESPL 208
Cdd:TIGR01972 156 YAAMKFFLYTLAGSLLMLLAiLGLYFLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPT 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 209 AGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGILSN 288
Cdd:TIGR01972 236 AGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSF 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 289 SLAGINGSLILSLAHGFVSPALFIIVgGILYDRYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLT 368
Cdd:TIGR01972 316 NELGISGAVFQMISHGLITAALFLLV-GVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILL 394
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 391224043 369 GAIGRSTILGCISAFSVLLSAAYMLKVTNRL-TGGIRTPYTALTSDCTYRESLLMIALIIPTLWYGLYPNGIINMI 443
Cdd:TIGR01972 395 GSFKVNPVVAFLAALGIVLAAAYMLTLYKRVfFGELSNPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLLDLT 470
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
52-443 |
4.47e-85 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 269.23 E-value: 4.47e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 52 DGIADIFILLTAYLLPLSIIANWNNIRSLLY-FELILNLGVILLIN-FMCQDMLSFYVYFEISLAPLFILIGLYGANNRD 129
Cdd:MTH00217 79 DGISIFFLILTALLTPICILISWNSIKFLIKeFLLCLLVIEILLMGvFTILDLVGFYILFEGILIPMFLIIGIWGSREEK 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 130 -KAADYILIYTLFSSLFMLLAIGTYEVLIGNTDYQAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVHSESPL 208
Cdd:MTH00217 159 vQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPV 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 209 AGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGILSN 288
Cdd:MTH00217 239 AGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSH 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 289 SLAGINGSLILSLAHGFVSPALFIIVgGILYDRYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLT 368
Cdd:MTH00217 319 TIQGLVAAIFLMLAHGLVSSALFIAV-TFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLL 397
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 391224043 369 GAIGRSTILGCISAFSVLLSAAYMLKVTNRLTGGIRTPYTALTSDCTYRESLLMIALIIPTLWYGLYPNGIINMI 443
Cdd:MTH00217 398 AAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGAPSKYLYFSRDLNRREFYVLLPLVFLIYLMGIFPFIIIDVI 472
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
47-443 |
2.99e-82 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 262.31 E-value: 2.99e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 47 IYYTSDGIADIFILLTAYLLPLSIIANWNNIRSLLY-FELILNLGVILLIN-FMCQDMLSFYVYFEISLAPLFILIGLYG 124
Cdd:MTH00204 77 LVFAVDGVSLFFILLTTLLIPICILISWKSIKFLFKeFLLCLLFLEVLLIGvFSVLDLLLFYILFEGILIPMFLLIGIWG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 125 A-NNRDKAADYILIYTLFSSLFMLLAIGTYEVLIGNTDYQAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVH 203
Cdd:MTH00204 157 SrEEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAH 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 204 SESPLAGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCIL 283
Cdd:MTH00204 237 VEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPL 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 284 GILSNSLAGINGSLILSLAHGFVSPALFIIVgGILYDRYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGE 363
Cdd:MTH00204 317 GLFTHTIEGLVAAVFLMLAHGFVSSALFIAV-TFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGE 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 364 LLSLTGAIGRSTILGCISAFSVLLSAAYMLKVTNRLTGGIRTPYTALTSDCTYRESLLMIALIIPTLWYGLYPNGIINMI 443
Cdd:MTH00204 396 FFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELLAILPLIIAIFLLGIVPFIIIDLV 475
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-437 |
2.73e-66 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 219.43 E-value: 2.73e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 3 LIYILILAGVSIFSRLLPTYGKGLILVASILVVLPTMTDWEEVGIYYTSDGIADIFILLTAYLLPLSIIANWNN------ 76
Cdd:MTH00206 9 LLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHmknepi 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 77 IRSLLYFELILNLGVILLINFMCQDMLSFYVYFEISLAPLFILIGLYGAN-NRDKAADYILIYTLFSSLFMLLAIGTYEV 155
Cdd:MTH00206 89 NRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQkERLNAGYYFLFYTLIGSLPLLIALLFLQN 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 156 LIGNTDYQAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRlIIPTLS 235
Cdd:MTH00206 169 SLGSLSLYILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMR-IILILG 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 236 DATVLYTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFiIVG 315
Cdd:MTH00206 248 PSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALF-CLA 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 316 GILYDRYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAIGRSTILGCISAFSVLLSAAYMLKV 395
Cdd:MTH00206 327 NLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYM 406
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 391224043 396 TNRLTGGIRTPYTALTSDCTYRESLLMIALIIPTLWYGLYPN 437
Cdd:MTH00206 407 FVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPN 448
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
47-443 |
1.37e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 211.32 E-value: 1.37e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 47 IYYTSDGIADIFILLTAYLLPLSIIANWNNIRSLLYFELI--LNLGVILLINFMCQDMLSFYVYFEISLAPLFILIGLYG 124
Cdd:MTH00226 96 LVFAVDGISIYFIILTGFIVPCSILISWHSVKYLTKSFLIcmLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWG 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 125 ANNRD-KAADYILIYTLFSSLFMLLAIGTYEVLIGNTDY--QAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPV 201
Cdd:MTH00226 176 SREEKmQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYltLASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPK 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 202 VHSESPLAGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVC 281
Cdd:MTH00226 256 AHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLV 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 282 ILGILSNSLAGINGSLILSLAHGFVSPALFIIVgGILYDRYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFI 361
Cdd:MTH00226 336 SITLVTHDIIGLTGSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFI 414
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 362 GELLSLTGAIGRSTILGCISAFSVLLSAAYMLKVTNRLTGGIRTPYTALTSDCTYRESLLMIALIIPTLWYGLYPNGIIN 441
Cdd:MTH00226 415 GEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRREFYITASMVFFAFLIGIYPIFILE 494
|
..
gi 391224043 442 MI 443
Cdd:MTH00226 495 VI 496
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
42-428 |
1.73e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 208.54 E-value: 1.73e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 42 WEEVGIYYTSDGIADIFILLTAYLLPLSIIANWNNIR----SLLYFELILNLGVILLINFMCQDMLSFYVYFEISLAPLF 117
Cdd:MTH00150 13 YESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKlrnkSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 118 ILIGLYGAN-NRDKAADYILIYTLFSSLFMLLAIGTYEVLIGNTDYQAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVH 196
Cdd:MTH00150 93 LLILGWGYQpERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFH 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 197 TWLPVVHSESPLAGSMLLAGVILKLAVYAIIRLIIpTLSDATVLYTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSIS 276
Cdd:MTH00150 173 LWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMM-VFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVG 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 277 HMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIVgGILYDRYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPL 356
Cdd:MTH00150 252 HMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLA-NYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPP 330
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 391224043 357 TVNFIGELLSLTGAIGRSTILGCISAFSVLLSAAYMLKVTNRLTGGIRTPYTALTSDCTYRESLLMIALIIP 428
Cdd:MTH00150 331 SLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVP 402
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
32-393 |
3.52e-54 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 187.28 E-value: 3.52e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 32 ILVVLPTMTDWEEVGIYYTSDGIADIFILLTAYLLPLSIIANWNNIRSLLYFE----LILNLGVILLINFMCQDMLSFYV 107
Cdd:MTH00163 35 FMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKNNYSNlflfLILFLLIFLLLTFSSMNLLLFYI 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 108 YFEISLAPLFILIGLYGANN-RDKAADYILIYTLFSSLFMLLAIGTYEVLIGNTDYqavSLVVLSTDLQCILFLCISAGI 186
Cdd:MTH00163 115 FFESSLIPTLFLILGWGYQPeRLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSF---FLLNFFGSLNFLWYLSMILAF 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 187 MVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRlIIPTLSDATVLYTPVVYVICAITIIYTSIITLRQTDL 266
Cdd:MTH00163 192 LVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLR-VMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDL 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 267 KVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIVgGILYDRYHHRLIYYYQGLLTYMPILAIYLLI 346
Cdd:MTH00163 271 KSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLA-NIIYERLGSRSLLINKGLLNFMPSMSLWWFL 349
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 391224043 347 LSFSNIGTPLTVNFIGELLSLTGAIGRSTILGCISAFSVLLSAAYML 393
Cdd:MTH00163 350 LSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSL 396
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
26-439 |
5.52e-53 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 184.41 E-value: 5.52e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 26 LILVASILVVLP-TMTDWEEVGIYYTSDGIADIFILLTAYLLPLSIIANWNNIRSL------LYFELILNLGVILLINFM 98
Cdd:MTH00044 33 LISLLSLFLLNNhWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASINHLSNNspnnqrTFISLIIIILTALIITFS 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 99 CQDMLSFYVYFEISLAPLFILIGLYGAN-NRDKAADYILIYTLFSSLFMLLAIGTYEVLIGNTDYQAVSLVVLSTDLQCI 177
Cdd:MTH00044 113 SLELILFYIAFETTLIPTLILITRWGAQkERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLSSNS 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 178 L----FLCISAGImVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYTPVVYVICAITI 253
Cdd:MTH00044 193 SsiwwIFCILAFL-VKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFSLPSANNISFILIVFCCWGA 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 254 IYTSIITLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIvGGILYDRYHHRLIYYYQGL 333
Cdd:MTH00044 272 LITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCL-ANILYERSGTRTLSITRGF 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 334 LTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAIGRSTILGCISAFSVLLSAAYMLKVTNRLTGGIRTPYTALTSD 413
Cdd:MTH00044 351 KLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSP 430
|
410 420
....*....|....*....|....*.
gi 391224043 414 CTYRESLLMIALIIPTLWYGLYPNGI 439
Cdd:MTH00044 431 ISSREHLLIFLHLLPLILIIINPNII 456
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
52-436 |
3.95e-49 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 175.22 E-value: 3.95e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 52 DGIADIFILLTAYLLPLSIIANWN-NIRSLLYFELILNLGVILLINFMCQDMLSFYVYFEISLAPLFILIGLYGANNRDK 130
Cdd:PRK12561 58 DGLSMPLVLLSGLITTLSIFASWKvTRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQKRLY 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 131 AADYILIYTLFSSLFMLLAiGTYEVLIGNT---DYQAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVHSESP 207
Cdd:PRK12561 138 AATKFILYTALASIFILVA-GLALALSGDTftfDLAELGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEAS 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 208 LAGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGILS 287
Cdd:PRK12561 217 APVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAA 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 288 NSLAGINGSLILSLAHGFVSPALFiIVGGILYDRYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGEL--- 364
Cdd:PRK12561 297 FTDLGISGAMLQMISHGLIAAALF-FLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELtvf 375
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 391224043 365 LSLTGAIGRSTILGCI----SAFSVLLSAAYMLKVTNRL---TGGIRTPYTALTSDCTYRESLLMIALIIPTLWYGLYP 436
Cdd:PRK12561 376 LGITSSDVYSSTFRTItillAAVGLILTPIYLLSMLRRVfygPRSELLPALAVVEDAKPRELFIALSLLVPIIGIGFYP 454
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
101-378 |
3.60e-48 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 167.11 E-value: 3.60e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 101 DMLSFYVYFEISLAPLFILIGLYGAN-NRDKAADYILIYTLFSSLFMLLAIGTYEVLIGNTDYQAVSLVVLSTD---LQC 176
Cdd:pfam00361 3 DLLLMYLGWEAVLLPSYLLIGYWGKSpRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLnssGLL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 177 ILFLCISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRLIiPTLSDATVLYTPVVYVICAITIIYT 256
Cdd:pfam00361 83 LLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRS-LLYLPSSPFIQQILLILAIISMLLG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 257 SIITLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIVGGILYDRYHHRLIYYYQGLLTY 336
Cdd:pfam00361 162 SLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLAKT 241
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 391224043 337 MPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAIGRSTILG 378
Cdd:pfam00361 242 MPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFL 283
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
48-439 |
2.32e-47 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 169.33 E-value: 2.32e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 48 YYTSDGIADIFILLTAYLLPLSIIANWNNI------RSLLYFELILNLGVILLINFMCQDMLSFYVYFEISLAPLFILIG 121
Cdd:MTH00068 55 YFGIDQISSPLLILTCWLLPLMILASQNHLknepinRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIIT 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 122 LYGAN-NRDKAADYILIYTLFSSLFMLLAIGTYEVLIGN---TDYQAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHT 197
Cdd:MTH00068 135 RWGNQeERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSlslILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHL 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 198 WLPVVHSESPLAGSMLLAGVILKLAVYAIIRlIIPTLSDATVLYTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSISH 277
Cdd:MTH00068 215 WLPKAHVEAPIAGSMILAAVLLKLGGYGILR-ISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSH 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 278 MAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIvGGILYDRYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLT 357
Cdd:MTH00068 294 MGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCL-ANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPS 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 358 VNFIGELLSLTGAIGRSTILGCISAFSVLLSAAY---MLKVTNRltGGIRTPYTALTSDCTyRESLLMIALIIPTLWYGL 434
Cdd:MTH00068 373 PNLWGELTIMVSLFNWSNWTILITGLGTLITAAYtlyMFLMTQR--GPLPNHLKTLFPTYT-REHLLLALHILPMLLLIL 449
|
....*
gi 391224043 435 YPNGI 439
Cdd:MTH00068 450 KPELI 454
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
26-430 |
2.98e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 163.83 E-value: 2.98e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 26 LILVASILVVLPTMTDWEEVGIYYTSDGIADIFILLTAYLLPLSIIANWNN------IRSLLYFELILNLGVILLINFMC 99
Cdd:MTH00124 33 LIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILASQNHlqheplQRKRTFLTTLILLQTFLILAFSA 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 100 QDMLSFYVYFEISLAPLFILIGLYGAN-NRDKAADYILIYTLFSSLFMLLAIGTYEVLIGNTDYQAVSLVVLSTDLQC-- 176
Cdd:MTH00124 113 TELTLFYIMFEATLIPTLILITRWGNQpERLSAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMLQLTHPTLTNSWtn 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 177 -ILFLCISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIR--LIIPTLSdaTVLYTPVVYV------ 247
Cdd:MTH00124 193 lLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRitLLLPPLS--NTLHYPFLTLalwgal 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 248 ----ICaitiiytsiitLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIvGGILYDRYH 323
Cdd:MTH00124 271 mtslIC-----------LRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCL-ANTNYERTH 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 324 HRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAIGRSTILGCISAFSVLLSAAY---MLKVTNRlt 400
Cdd:MTH00124 339 SRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLATLITASYtlyMFLSTQR-- 416
|
410 420 430
....*....|....*....|....*....|
gi 391224043 401 gGIRTPYTALTSDCTYRESLLMIALIIPTL 430
Cdd:MTH00124 417 -GTLPTHITTIQPTHTREHLLMTLHIIPLL 445
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-441 |
3.46e-45 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 163.37 E-value: 3.46e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 1 MTLIYILILAGVSIFSRLLPTYGKGLILVASILVVLPTMTDWEEVGIYY-TSDGIADIFILLTAYLLPLSIIANW----N 75
Cdd:MTH00014 6 MPLISLLLLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESlSSDMLSAPLITLTLWITALMILASFkifqN 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 76 NIRSLLYFELILNLGVILLINFMCQDMLSFYVYFEISLAPLFILIGLYGAN-NRDKAADYILIYTLFSSLFMLLAIGTYE 154
Cdd:MTH00014 86 NKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQpERLQASFYLMIYTVTASLPLLMSILLIF 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 155 VLIGNTDYQAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRLIIPTL 234
Cdd:MTH00014 166 YTNNSLSMLMSSMEPPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSLFM 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 235 SDATVLYTPVVyVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIv 314
Cdd:MTH00014 246 HINKSLSAPFS-SISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFAL- 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 315 GGILYDRYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAIGRSTILGCISAFSVLLSAAYMLK 394
Cdd:MTH00014 324 ANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLF 403
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 391224043 395 VTNRLTGGIRTPYTALTSDCTYRESLLMIALIIPTLWYGLYPNGIIN 441
Cdd:MTH00014 404 LYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITN 450
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
49-393 |
1.04e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 159.37 E-value: 1.04e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 49 YTSDGIADIFILLTAYLLPLSIIANW----NNIRSLLYFELILNLGVILLINFMCQDMLSFYVYFEISLAPLFILIGLYG 124
Cdd:MTH00205 53 FSFDSLSLPLIMLSFWISLLMVLASYkvfkSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 125 AN-NRDKAADYILIYTLFSSLFMLLAIGTYEVLIGNTDYQAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVH 203
Cdd:MTH00205 133 YQpERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAH 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 204 SESPLAGSMLLAGVILKLAVYAIIRLIIPtLSDATVLYTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCIL 283
Cdd:MTH00205 213 VEAPVSGSMILAGVLLKLGGYGLIRITSM-LYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVV 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 284 GILSNSLAGINGSLILSLAHGFVSPALFIIvGGILYDRYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGE 363
Cdd:MTH00205 292 GVFSNTSWGMNGAIIMMVAHGLCSSGMFAL-ANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASE 370
|
330 340 350
....*....|....*....|....*....|
gi 391224043 364 LLSLTGAIGRSTILGCISAFSVLLSAAYML 393
Cdd:MTH00205 371 ILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
51-436 |
1.76e-42 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 157.56 E-value: 1.76e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 51 SDGIADIFILLTAYLLPLSIIANWN-NIRSLLYFELILNLGVILLINFMCQDMLSFYVYFEISLAPLFILIGLYGANNRD 129
Cdd:PRK02546 85 ADGLSMPLILLTGFITTLAVLAAWPvTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKKRQ 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 130 KAADYILIYTLFSSLFML---LAIGTYEVLIgNTDYQAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVHSES 206
Cdd:PRK02546 165 YAATKFILYTAGSSLFILlaaLAMAFYGDTP-TFDMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEA 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 207 PLAGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGIL 286
Cdd:PRK02546 244 TAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIG 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 287 SNSLAGINGSLILSLAHGFVSPALFIIVGGIlYDRYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLS 366
Cdd:PRK02546 324 SFTDLGTSGAMLQMISHGLIGASLFFLVGAT-YDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMV 402
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 367 LTG-------AIGRSTILGCISAFSVLLSAAYMLKVTNRLTGGIRTPytALTS-----DCTYRESLLMIALIIPTLWYGL 434
Cdd:PRK02546 403 FVGfatsdayTLPFRVVVVFLAAVGVILTPIYLLSMLREIFFGPENK--ELVSheklvDAEPREVFIIACLLVPIIGIGL 480
|
..
gi 391224043 435 YP 436
Cdd:PRK02546 481 YP 482
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
37-430 |
1.93e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 156.27 E-value: 1.93e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 37 PTMTDWEEVGIYYTSDGIADIFILLTAYLLPLSIIANWNNI------RSLLYFELILNLGVILLINFMCQDMLSFYVYFE 110
Cdd:MTH00127 45 LSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILASQNHTapepinRQRMYITLLTSLQIFLILAFGATEIIMFYVMFE 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 111 ISLAPLFILIGLYGAN-NRDKAADYILIYTLFSSLFMLLAIGTYEVLIGNTDY---QAVSLVVLSTDLQCILFLCISAGI 186
Cdd:MTH00127 125 ATLIPTLIIITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMltlQYSQPLQLSSWADKLWWAGCLLAF 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 187 MVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYTPvvYVICAI-TIIYTSIITLRQTD 265
Cdd:MTH00127 205 LVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYP--FIILALwGIIMTGSICLRQTD 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 266 LKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIvGGILYDRYHHRLIYYYQGLLTYMPILAIYLL 345
Cdd:MTH00127 283 LKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCL-ANTNYERTHSRTMLLARGLQMILPLMATWWF 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 346 ILSFSNIGTPLTVNFIGELLSLTGAIGRSTILGCISAFSVLLSAAY---MLKVTNRltgGIRTPYTALTSDCTYRESLLM 422
Cdd:MTH00127 362 IASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYslyMFLMTQR---GPLPDHIIALNPSHTREHLLM 438
|
....*...
gi 391224043 423 IALIIPTL 430
Cdd:MTH00127 439 ALHLLPLL 446
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
26-399 |
1.71e-40 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 150.30 E-value: 1.71e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 26 LILVASILVVLPTMTDWEE-VGIYYTSDGIADIFILLTAYLLPLSIIANW------NNIRSLLYFELILNLGVILLinFM 98
Cdd:COG0651 48 LLQVLAGGPLVYALGGWPApFGIVLVADRLSALFLLLTALVALAVLLYSIgymrheRRGRRFYPLFLLLLAGMNGA--FL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 99 CQDMLSFYVYFEISLAPLFILIGLYGANNRDKAADYILIYTLFSSLFMLLAIGTYEVLIGNTDYQ--AVSLVVLSTDLQC 176
Cdd:COG0651 126 TGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMAdlAARLAELDPGLLL 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 177 ILFLCISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYTPVVYVICAITIIYT 256
Cdd:COG0651 206 AAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPALFLGTLLLVLGLLTMLV 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 257 -SIITLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIVGGILYdRYHHRLIYYYQGLLT 335
Cdd:COG0651 286 gALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIER-ATGTRDLDKLGGLGK 364
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 391224043 336 YMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAI-GRSTILGCISAFSVLLSAAYMLKVTNRL 399
Cdd:COG0651 365 RMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALeAGAWLLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
26-439 |
5.47e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 149.27 E-value: 5.47e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 26 LILVASILVVLPTMTDWEEVGIYYTSDGIADIFILLTAYLLPLSIIANWNNI------RSLLYFELILNLGVILLINFMC 99
Cdd:MTH00110 33 LISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMASQHHLskepltRKKLYITMLILLQLFLIMTFTA 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 100 QDMLSFYVYFEISLAPLFILIGLYGANN-RDKAADYILIYTLFSSLFMLLAIGTYEVLIGNTDYQAVSLVVLSTDL---Q 175
Cdd:MTH00110 113 TELIMFYILFEATLIPTLIIITRWGNQTeRLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFLLLQLWAQPLPNswsN 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 176 CILFLCISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYTPVVyVICAITIIY 255
Cdd:MTH00110 193 NLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAYPFL-MLSLWGMIM 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 256 TSIITLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIVGGIlYDRYHHRLIYYYQGLLT 335
Cdd:MTH00110 272 TSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSN-YERIHSRTMILARGLQT 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 336 YMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAIGRSTILGCISAFSVLLSAAY---MLKVTNR--LTGGIRTPYTAL 410
Cdd:MTH00110 351 LLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNMLITALYslyMLITTQRgkLTHHINNIKPSF 430
|
410 420
....*....|....*....|....*....
gi 391224043 411 TsdctyRESLLMIALIIPTLWYGLYPNGI 439
Cdd:MTH00110 431 T-----RENTLMALHLLPLLLLSLNPKII 454
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
52-440 |
5.83e-37 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 141.76 E-value: 5.83e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 52 DGIADIFILLTAYLLPLSIIANWNNI-RSLLYFELILNLGVILLINFMCQDMLSFYVYFEISLAPLFILIGLYGANNRDK 130
Cdd:PRK06473 78 DGLSLPLLVLNSLLTLIAIYSSDESIqRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQRRGY 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 131 AADYILIYTLFSSLFMLLAIGTYEVLIG--NTDYQAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVHSESPL 208
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEAST 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 209 AGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGILSN 288
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAA 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 289 SLAGINGSLILSLAHGFVSPALFIIVgGILYDRYHHRLIYYYQGLLTY---MPILAIYLLILSFSNIGTPLTVNFIGELL 365
Cdd:PRK06473 318 TPLSILAAVFQMISHGLISALLFLLV-GVVYKKTGSRDVDVLRGLLNPergLPITGSLMILGVMASAGIPGMVGFIAEFL 396
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 391224043 366 SLTGAIGRSTILGCISAFSVLLSAAYMLKVTNRLTGGIRTPYTALTSDCTYRESLLMIALIIPTLWYGLYPNGII 440
Cdd:PRK06473 397 VFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPRVLWSERLPALVLAVLIVVLGIQPSWLV 471
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
52-437 |
2.29e-35 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 137.38 E-value: 2.29e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 52 DGIADIFILLTAYLLPLSIIANWNNIRS--LLYF-ELILNLGVILLinFMCQDMLSFYVYFEISLAPLFILIGLYGANNR 128
Cdd:CHL00011 83 DGLSIGPILLTGFITTLATLAAWPVTRNsrLFYFlMLAMYSGQIGL--FSSRDLLLFFIMWELELIPVYLLLSMWGGKKR 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 129 DKAADYILIYTLFSSLFML---LAIGTYEVLIGNTDYQAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVHSE 205
Cdd:CHL00011 161 LYSATKFILYTAGGSIFLLigvLGMGLYGSNEPTLNFETLANQSYPVALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGE 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 206 SPLAGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGI 285
Cdd:CHL00011 241 AHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGI 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 286 LSNSLAGINGSLILSLAHGFVSPALFIIvGGILYDRYhhRLIYYYQ--GLLTYMPILAIYLLILSFSNIGTPLTVNFIGE 363
Cdd:CHL00011 321 GSITDTGLNGAILQIISHGFIGAALFFL-AGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMASLALPGMSGFVAE 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 364 LLSLTGAIGRS-------TILGCISAFSVLLSAAYMLKVTNRLTGGIRTPYTALTS--DCTYRESLLMIALIIPTLWYGL 434
Cdd:CHL00011 398 LIVFFGIITSQkyllmpkILITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNSYffDSGPRELFISICILLPVIGIGI 477
|
...
gi 391224043 435 YPN 437
Cdd:CHL00011 478 YPD 480
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
7-441 |
7.82e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 130.00 E-value: 7.82e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 7 LILAGVSIFSRLLPTYGKGLILVASIL------VVLPTMTD----------WE-EVGIYYTSDGIADIFILLTAYLlplS 69
Cdd:PRK08375 14 LLAAALIVLLPKRRRLRWALALLVAALtfalaiSLLPQVLDggviayvvggWPpGIGIELRADSLSALFLLVTSIL---A 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 70 IIANWNNI-----RSLLYFELILNLGVILLINFMCQDMLSFYVYFEISLAPLFILIGLYGANNRDKAADYILIYTLFSSL 144
Cdd:PRK08375 91 IAALLYAIgygehRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGST 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 145 FMLLAIGTYEVLIGNTDYQAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVY 224
Cdd:PRK08375 171 FLLIGVGLLYGVTGTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVY 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 225 AIIRLII----PTLSDATVLYTPVVYvICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILS 300
Cdd:PRK08375 251 ALIRIYFtvfgGDFRFALGLGWLLAV-LALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHL 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 301 LAHGFVSPALFIIVGGIlYDRYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAIG-RSTILGC 379
Cdd:PRK08375 330 LHHALMKGALFLAAGAI-EVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLA 408
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 391224043 380 ISAFSVLLSAAYMLKVTNRLTGGIRTPYTALTsdcTYRESLLMIA----LIIPTLWYGLYPNGIIN 441
Cdd:PRK08375 409 VLLASSLLALLYFLRIWYRAFFGPPPPGSEAP---KQEAPLGMLApslaLALLSLLLGIYAGPLLQ 471
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
52-437 |
1.63e-31 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 126.37 E-value: 1.63e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 52 DGIADIFILLTAYLLPLSIIANWNNI-RSLLYFELILNLGVILLINFMCQDMLSFYVYFEISLAPLFILIGLYGANNRDK 130
Cdd:PRK07363 78 DGLSLPLLVLNSLLTWIAIYSIGENTeRPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEKRGY 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 131 AADYILIYTLFSSLFMLLAIGTYEVLIGNT--DYQAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVHSESPL 208
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTsfDYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASP 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 209 AGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGILSN 288
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 289 SLAGINGSLILSLAHGFVSPALFIIVgGILYDRYHHRLIYYYQGLLTY---MPILAIYLLILSFSNIGTPLTVNFIGELL 365
Cdd:PRK07363 318 TQLSLLGAVAQMISHGLILALLFHLV-GIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGLVGFVAEFI 396
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 391224043 366 SLTGAIGRSTILGCISAFSVLLSAAYMLKVTNRLTGGIRTPYTALTSDCTYRESLLMIALIIPTLWYGLYPN 437
Cdd:PRK07363 397 VFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKLAYYPKVLWSEKIPALILTALILFLGVQPN 468
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
26-443 |
2.28e-25 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 108.28 E-value: 2.28e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 26 LILVASILVVLPTMTDWEEVGIY--YTSDGIADIF--ILLTAYLLPLSIIANWNNIRSLLYFE---LIL--NLGVILLIN 96
Cdd:COG1007 41 LGLLLALALLLLALGGGTGTAFGgmFVVDGFALFFklLILLAALLVLLLSRDYLERRGLLRGEfyaLLLfaTLGMMLMAS 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 97 FmcQDMLSFYVYFEISLAPLFILIGLYGANNRDK--AADYiLIYTLFSSLFMLLAIGTYEVLIGNTDYQAVSLVVLSTDL 174
Cdd:COG1007 121 A--NDLLTLFLGLELLSLSLYVLVAFRRDDRRSSeaALKY-FLLGALSSGFLLYGISLLYGATGSLNLAGIAAALAAGGA 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 175 QCILFLC----ISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYTPVVYVICA 250
Cdd:COG1007 198 NSPLLLLglvlVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFPGLAADWQLLLAVLAV 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 251 ITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIVGGILYDRYHHRLIYYY 330
Cdd:COG1007 278 LSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDL 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 331 QGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAIGRS-TILGCISAFSVLLSAAYMLKVTNRLTggIRTPYTA 409
Cdd:COG1007 358 AGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGlYWLAVIAVLNSVISAYYYLRVVKAMY--FDEPEEE 435
|
410 420 430
....*....|....*....|....*....|....
gi 391224043 410 LTSDCTYRESLLMIALIIPTLWYGLYPNGIINMI 443
Cdd:COG1007 436 APISAPPGLRVALVIAALLVLLLGIFPGPLLDLA 469
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
57-393 |
2.74e-23 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 101.14 E-value: 2.74e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 57 IFILLTAYLLPLSIIANWNNirsLLYFELILnlgVILLINFMCQDMLSFYVYFEISLAPLFILIGLYGAN-NRDKAADYI 135
Cdd:MTH00094 45 IFMMVFILGLVLLSEKNFNL---LILSNLLI---LICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQiEKINSSYYL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 136 LIYTLFSSLFMLLaigtyeVLIGNtdYQAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLA 215
Cdd:MTH00094 119 LFYAAFFSFPFLF------VYLKN--FFFFSLCYFDFFLSWEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLA 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 216 GVILKLAVYAIIRLiiptLSDATVLYTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGILSNSLAGING 295
Cdd:MTH00094 191 GLLLKLGTAGFLRI----LGSLNFVYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLS 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 296 SLILSLAHGFVSPALFIIVgGILYDRYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAIGRST 375
Cdd:MTH00094 267 GLMMMLAHGYTSTLMFYLI-GEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNK 345
|
330
....*....|....*...
gi 391224043 376 ILGCISAFSVLLSAAYML 393
Cdd:MTH00094 346 FSFFFIFFYFLVSFYYSL 363
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
26-395 |
8.88e-22 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 97.58 E-value: 8.88e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 26 LILVASILVVLPTMTDWEEVGIYYTSDGIADIF--ILLTAYLLPLSIIANWNNIRSLL-YFELIL--NLGVILLInfMCQ 100
Cdd:PRK05777 46 LLALVALLFVLGAAGGGTAFGGMLVVDGFALFLkgLILLASLLALLLARPYLEDRGRGeFYLLVLfaLLGMMVMV--SAN 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 101 DMLSFYVYFEISLAPLFILIGLygANNRDKAADYILIYTL---FSSLFMLLAIGTYEVLIGNTDYQAVSLVVLSTDLQCI 177
Cdd:PRK05777 124 DLLTLFLGLELLSLPLYALAAL--RRDRRRSLEAAIKYFVlgaLASGFLLYGMSLLYGATGSLSFAGIAKALADGSGNSL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 178 LFLC----ISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVIlKLAVYAII-RLIIPTLSDATVLYTPVVYVICAIT 252
Cdd:PRK05777 202 LLLFglvfLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVLlRLLVVAFGGLSEDWQQVLAIIAIAS 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 253 IIYTSIITLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIVGGILYDRYHHRLIYYYQG 332
Cdd:PRK05777 281 MLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAG 360
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 391224043 333 LLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAI-GRSTILGCISAFSVLLSAAYMLKV 395
Cdd:PRK05777 361 LSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVeAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-450 |
1.25e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 91.17 E-value: 1.25e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 2 TLIYILILAGVSIFSRLLPTYGKGLILVASI--------LVVLPTMTDWE---EVGIYYTSDGIADIFILLTAYLLPLSI 70
Cdd:PRK07234 5 TPVWIALPFLLGFAIYLLPKLDRNLALGMAIvsavyalgLVASMVPLELTlldNFGVTLRADALSGYFILTNALVTLAVI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 71 IANWNNIRSLLYFELILNLGVILLINFMCQDMLSFYVYFEISLAPLFILIGlYGANNRDKAADY-ILIYTLFSSLFMLLA 149
Cdd:PRK07234 85 FYCWESAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLrYLFYSNVAMLFYLIG 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 150 IGTYEVLIGNTDYQAvslvvLSTDLQCILFLcISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRL 229
Cdd:PRK07234 164 AVLVYQANGTFAFSG-----LATADPEAFAL-IALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRC 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 230 IIptlsDATVLYtPVVYVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGILSNSLagingsliLSLAHGFVSPA 309
Cdd:PRK07234 238 AL----DVPGLD-LIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVGGL--------YALAHGLVKST 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 310 LFIIVgGILYDRYHHRLIYYYQGLLTYMPilaiyLLILSFSNIGTPLTVNFIGELLSLTGAIGRSTILGCISAfsvLLSA 389
Cdd:PRK07234 305 LFLCA-GALPSRNFTELISQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNLAA---VGTA 375
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 391224043 390 AYMLKVtnrltggIRTPYTALTSDCTYRESllMIALIIPTLWYGLYPNGIINMIWQGSKLL 450
Cdd:PRK07234 376 ASFWKF-------IFLPFSADDEDKKPLPG--FWNAIALLLGGLFLANGVYTEAYTLGNIL 427
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
189-445 |
3.07e-19 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 89.99 E-value: 3.07e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 189 KTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYTPVVYVICAITIIYTSIITL-RQTDLK 267
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPGRLLLIFGLLSVLVAAFFLlRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 268 VIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIVGGILYDrYHHRLIYYYQGLLTYMPILAIYLLIL 347
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQK-YGTRDINVIRGLLKVSPLTGWGLMLG 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 348 SFSNIGTPLTVNFIGELLSLTGAIGRSTILGCIS-AFSVLLS-AAYMLKVTNRLTGGirTPYTALTSDCTYRESLLMIAL 425
Cdd:PRK06458 386 ALAIAGMPPFGVFISEFLILTAGLARGPLLIAILlLLLLTLAfAALVRRVAGMVFGE--PPEAVNRGDLGWLTTSPMFVH 463
|
250 260
....*....|....*....|
gi 391224043 426 IIPTLWYGLYPNGIINMIWQ 445
Cdd:PRK06458 464 LVLVLVLGLYIPQPLVRWLQ 483
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
98-365 |
1.39e-18 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 88.63 E-value: 1.39e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 98 MCQDMLSFYVYFEI-SLAPLFILIGLYGANNRDKAADYILIYTLFSSLFMLLAIGTYEVLIGNTDYqavSLVVLSTDLQC 176
Cdd:PRK08667 129 ASANTFSFLFFWEImALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFEL---SPLGASAGILS 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 177 ILFLCISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRLIIPTLSdATVLYTPVVYVICAITIIYT 256
Cdd:PRK08667 206 LVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLS-PELWWGVLILLAGSISALLG 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 257 SIITLRQTDLKVIVAYSSISHMAVCILGI-----------LSNSLAGINGSLILSLAHGFVSPALFIIVGGILYdRYHHR 325
Cdd:PRK08667 285 VIYALKEHDLKGLLAYSSIENIGIILMGIglyvifgvyglDTLALLALGGALFHSLNHALFKSLLFLTAGSVVH-ATGTR 363
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 391224043 326 LIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELL 365
Cdd:PRK08667 364 NIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELL 403
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
26-395 |
3.87e-18 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 86.54 E-value: 3.87e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 26 LILVASILVVLPTMTDWEEVGIYYTSDGIADIF--ILLTAYLLPLSIIANWNNIRSLLYFEL-ILNLGVILLINFMCQ-- 100
Cdd:TIGR01770 43 LSALVSLFLTLQYAAYLFTGFSFFIVDNFALLIklILLLSTLLTFFFALSYLSKEKINKFEFyILLLFALLGIFLLVSsn 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 101 DMLSFYVYFEISLAPLFILIGLYGANNRDK-AADYILIYTLFSSLFMLLAIGTYEVLIGNTDYQAVSLVVLSTDLQCILF 179
Cdd:TIGR01770 123 DLLSIYLGLELQSLCFYVLAGLKRKSRFSTeAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNISLL 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 180 ----LCISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYTPVVYVICAITIIY 255
Cdd:TIGR01770 203 llgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLI 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 256 TSIITLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIVgGILYDRYHHRLIYY--YQGL 333
Cdd:TIGR01770 283 GNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFGVL-SLLRSYKDEWIEYIsdFAGL 361
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 391224043 334 LTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAIGRSTI-LGCISAFSVLLSAAYMLKV 395
Cdd:TIGR01770 362 FKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYwLAVIAVLTSVIGAFYYLRV 424
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
97-443 |
1.16e-17 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 85.43 E-value: 1.16e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 97 FMCQDMLSFYVYFEISLAPLFILIGLYGANNRDKAADYILIyTLFSSLFMLLAIGTYEVLIGNTDYQAVSLVVL---STD 173
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPMGKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADISQGLIndtSTG 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 174 LQCILFLCISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIrLIIPTLSDATVLYTPVVY------- 246
Cdd:PRK08668 194 FALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFL-LVLYVLPGTKLFSEFGTYrgvplfn 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 247 ----VICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIVGGILYdRY 322
Cdd:PRK08668 273 yilaWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIY-RT 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 323 HHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAIGRST-ILGCISAFSVLLSAAYMLKVTNRLTG 401
Cdd:PRK08668 352 GTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMpITAFMAFFGSIGSFLYVFRPLAGVFL 431
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 391224043 402 GIRTPYTALTSDCTYRESLLMIALIIPTLWYGLYPNGIINMI 443
Cdd:PRK08668 432 GQLPSDHKDVKEAPLPMLIPMAILVLLNVVFGVAPGLVLQEI 473
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
101-399 |
2.03e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 78.24 E-value: 2.03e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 101 DMLSFYVYFEISLAPLFILIglygANNRDKAA-----DYILIYTLfSSLFMLLAIGTYEVLIG--NTDYQAVSLVVLSTD 173
Cdd:PRK12662 131 DVFNIYVFLEISSISSYVLV----AMGRDKKAlvaafEYLIIGTI-GATFYLIGIGFLYAITGtlNMGDMFLIIQDLPTN 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 174 -LQCILFLCISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYTP----VVYVI 248
Cdd:PRK12662 206 rAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTLpfnnVFMIL 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 249 CAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIVGGILYdRYHHRLIY 328
Cdd:PRK12662 286 AALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISY-HFGTTKLE 364
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 391224043 329 YYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAIGRSTILGCIsAFSV--LLSAAYMLKVTNRL 399
Cdd:PRK12662 365 DCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLV-VLLVgsGLSVIYVWKIVEAL 436
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
45-444 |
4.02e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 77.32 E-value: 4.02e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 45 VGIYYTSDGIADIFILLTAYLLPLSIIANWNNIRSL----LYFELILNLGVILLINFMCQDMLSFYVYFEISLAPLFILI 120
Cdd:PRK12667 74 IGIVYEVDLLGALLGLLTALVMFLILIYSYWYLEHEsgpeWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLV 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 121 GLYGanNRDKAADYILIYTLF---SSLFMLLAIGTYEVLIGNTDYQAVSLVVLSTD--------------LQCILFLCIS 183
Cdd:PRK12667 154 AYYR--DRGDAVEAAIKYALIgavGTTLYFLALAFLYATFGTLNMADLSAKIRGLSfpltgglagnpplaLGVALALALW 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 184 AgIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRL------IIPTLSDATVLYTPVVYVICAITIIYTS 257
Cdd:PRK12667 232 A-FTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgISPSLIDFRAALSPILIILGAVSAIIGA 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 258 IITLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIVGGILyDRYHHRLIYYYQGLLTYM 337
Cdd:PRK12667 311 LMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFI-HAAGTRDIDELAGLGRKM 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 338 PILAIYLLILSFSNIGTPLTVNFIGELLSLTGAIGRSTILGCISA-FSVLLSAAYMLKVTNRLTGGIRTPYTALTSDCTY 416
Cdd:PRK12667 390 PIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLlIASAISLVGYFRAWYSLFFGKPKSGEEVEHKESP 469
|
410 420
....*....|....*....|....*...
gi 391224043 417 RESLLMIALIIPTLWYGLYPNGIINMIW 444
Cdd:PRK12667 470 SMSVVILVLALAVLILGILALFLPEILD 497
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
85-364 |
6.35e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 73.85 E-value: 6.35e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 85 LILNLGVILliNFMCQDMLSFYVYFEISLAPLFILIGLYGANNRDKAADYILIYTLFSSLFMLLAIGTYEVLIG--NTDY 162
Cdd:PRK12665 118 LILVAGVSN--AFLAGDLFNLYVGFEILLVASYVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGtlNMAD 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 163 QAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIR---LIIPTLSDATV 239
Cdd:PRK12665 196 LAVRLDELPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRthtLLFPGGGLDTL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 240 LYtpvvyVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIVGgiLY 319
Cdd:PRK12665 276 LM-----VVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVG--LI 348
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 391224043 320 DRYH-----HRLiyyyQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGEL 364
Cdd:PRK12665 349 ERQAgssslRRL----GGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKV 394
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
46-450 |
7.60e-14 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 73.45 E-value: 7.60e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 46 GIYYTSDGIADIFILLTAYLLPLSIIANWNNI----RSLLYFELILNLGVILLINFMCQDMLSFYVYFEISLAPLFILIG 121
Cdd:PRK12663 70 GIQFTGDSLSALMVTTASFVATAIMAYGFGDIehsgRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 122 LYGANNRDKAADYILIYTLFSSLFMLLAIGTYEVLIGNTDYQAVSLVVlsTDLQCILFLCISAGIMV-----KTPLVPVH 196
Cdd:PRK12663 150 LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRL--NDMGDTATLTTIALLFLlafgmKAALFPFM 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 197 tWLPVVHSESPLAGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSIS 276
Cdd:PRK12663 228 -WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVIS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 277 HMAVCILGILSNSLAGINGSlILSLAHGFVSPALFIIVGGILYDRYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPL 356
Cdd:PRK12663 307 SIGFILLGLALGTPAGINGA-IFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPP 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 357 TVNFIGELLSLTGAIGRSTILGCISAFSVLLSAAY-MLKVTNRLTGGIRTPYTALTSDCTYRESLLMIALIIPTLWYGLY 435
Cdd:PRK12663 386 FSGFWGKVLLVQGALDNGAYILLALMLITSLITMYsLFRIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILAVVVIAMGIA 465
|
410
....*....|....*
gi 391224043 436 PNGIINMIWQGSKLL 450
Cdd:PRK12663 466 AEPLLNLTQDAAEGL 480
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
169-402 |
2.11e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 72.09 E-value: 2.11e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 169 VLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRLI-IPTLSDATVLYTPVVYV 247
Cdd:PRK08676 199 LLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSaLLRQSGAAEQFSNVLIG 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 248 ICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFiIVGGILYDRYHHRLI 327
Cdd:PRK08676 279 LGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLF-FSAGILHRQYRSDRF 357
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 391224043 328 YYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAIGRSTILGCISAFSVLLSAA----YMLKVTNRLTGG 402
Cdd:PRK08676 358 DRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASsfaiFLLKAFTRVSEG 436
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
25-395 |
1.59e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 69.46 E-value: 1.59e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 25 GLILVASILVVLPTMTDWE-----EVGIYYTSDGIADIFILLTAYLLPLSIIANW---------NNIRSLLYFELILNLG 90
Cdd:PRK06589 50 GNILLIDLLFLKGIRAQFElmdfgNYSIGLHLEPLGLIFLLLIGFLWICALLYTPkylainnidSSSRFLFFFNLTILIG 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 91 VILLINfmcQDMLSFYVYFEISLAPLFILIGlYGANNRDKAA--DYILIYTLFSSLFMLLAIGTYEVLIGNTDYQAVSLv 168
Cdd:PRK06589 130 VLIALS---SDLFTMFVCYELLTISTAFLIG-HTRNNISLSGgyKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGL- 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 169 vLSTDLQCILFLCISAGImVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRLIIPT--LSDATVLYTPVVY 246
Cdd:PRK06589 205 -FSKNQSIILLLMFIYGI-AKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIfgLSYLQRIFAEFNW 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 247 VICAITIIYTSIIT--LRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIVGGIlYDRYHH 324
Cdd:PRK06589 283 LIFIPIVSIFYSSLkaLKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSI-YSLKKE 361
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 391224043 325 RLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIG-----ELLSLTGAIGRSTILGCISAFSVLLSAAYMLKV 395
Cdd:PRK06589 362 DQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISkflilLAASEQNQPWLSIIVMLVVIASSILSALYLLKI 437
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
101-362 |
1.76e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 66.49 E-value: 1.76e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 101 DMLSFYVYFEISLAPLFILIGLYG--ANNRdKAADYILIYTLFSSLFMLLAI-------GTY---EVLIGNTDYQAVSLV 168
Cdd:PRK12644 127 NLLLLYVFWELTTVLSFLLIGHYAerAASR-RAALQALLVTTAGGLAMLVGIiilgqaaGTYrlsELLADPPTGPAVSVA 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 169 VLstdlqcilflCISAGIMVKTPLVPVHTWLPvvhsesplaGSM---------LLAGVILKLAVYAIIRLIiPTLSDATV 239
Cdd:PRK12644 206 VV----------LILVGALSKSAIVPFHFWLP---------GAMaaptpvsayLHAAAMVKAGIYLVARLA-PGFADVPV 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 240 lYTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSISH----MAVCILGILSNSLAGingsLILSLAHGFVSPALFIIVG 315
Cdd:PRK12644 266 -WRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQlgflTVLVGIGTRDAALAG----LAMLLAHALFKAALFLVVG 340
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 391224043 316 GIlydryHH----RLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIG 362
Cdd:PRK12644 341 II-----DHstgtRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVA 386
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
101-346 |
2.01e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 66.07 E-value: 2.01e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 101 DMLSFYVYFEI-SLAPLFILIglygANNRDKAAD-----YILIyTLFSSLFMLLAIGTYEVLIGNTDYQAVSLVVLSTDL 174
Cdd:PRK06521 134 DAFSFLVAWETmSLSSWFLVI----ANHREAEIRragflYLLM-AHAGALAILLAFGLLARESGSYDFAAMRAAHLSPFW 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 175 QCILFLCISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYTPVVYVICAITII 254
Cdd:PRK06521 209 ASLVFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLGAPGWWWGVLVLALGAISAV 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 255 YTSIITLRQTDLKVIVAYSSISHMAVCILGI------LSNSLA-----GINGSLILSLAHGFVSPALFIIVGGILYdRYH 323
Cdd:PRK06521 289 LGVLYALAEHDLKRLLAYSTIENIGIIFVGLglamvfIAYGMPllaalALTAALYHLLNHALFKSLLFLGAGAVLH-ATG 367
|
250 260
....*....|....*....|...
gi 391224043 324 HRLIYYYQGLLTYMPILAIYLLI 346
Cdd:PRK06521 368 TRDMEKLGGLIRRMPWTAWAFLI 390
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
52-372 |
5.45e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 64.17 E-value: 5.45e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 52 DGIADIFILLTAYLLPLSIIANWNNIRSLLYFELILNLGVILLInFMCQDMLSFYVYFEISLAP-LFILIGLYGANNRDK 130
Cdd:MTH00062 44 DSLSFYLILLVLFLGLYSQVMFYNLLSGVSRFFLFLSLIFSILC-FCVNNSLLFWFFYELSIIPlLYLLFSESPYSERYL 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 131 AADYILIYTLFSSLFMLLAIgTYEVLIGNTDYqaVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVHSESPLAG 210
Cdd:MTH00062 123 ASWYFLGYLLLTSLPLLLCL-LYLSLVNGSFN--FSDWGSDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPV 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 211 SMLLAGVILKLAVYAIIRLIIPTLSDATVLYTpvvyVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGILSNSL 290
Cdd:MTH00062 200 SIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYL----FLCCLFSVFFLITACSELDGKRWLAFLSLSHILVPVLGLFVGDW 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 291 AGINGSLILSLAHGFvSPALFIIVGGILYDRYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGA 370
Cdd:MTH00062 276 SSINLSFFYCLGHGL-SAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSS 354
|
..
gi 391224043 371 IG 372
Cdd:MTH00062 355 FG 356
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
185-458 |
9.34e-11 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 63.63 E-value: 9.34e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 185 GIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRlIIPTLSDATVL--YTPVVYVICAITIIYTSIITLR 262
Cdd:PRK08377 215 GLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMAR-ILYLMQNANGWssVLKLVIIMATLTVFFAELSALR 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 263 QTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIVGGILYDRYHHRlIYYYQGLLTYMPILAI 342
Cdd:PRK08377 294 QKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTAL 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 343 YLLILSFSNIGTPLTVNFIGELLSLTGAI--GRSTILGCISAFSVLLSAAY--MLKVTNRLTGGIRTPYTALTsdctyre 418
Cdd:PRK08377 373 ALTIGALSTVGIPLFNVFWSKFRIILAGLsaGYTWPVALVLGASVVEAVYYfrLIHTMWFKGEGERIRENAAI------- 445
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 391224043 419 SLLMIALIIPTLWYGLYPNGIINMIWQGSKllYIFVITQY 458
Cdd:PRK08377 446 GIILLLLAALIVVIGIYPTPFWEVVQKAGS--DIFNVAQY 483
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
89-395 |
1.01e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 63.13 E-value: 1.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 89 LGVILLINfmCQDMLSFYVYFEISLAPLFILIGLYGANNRDKAA--DYILIYTLFSSLFM----LLAIGTYEVLIGNTDY 162
Cdd:MTH00196 4 LGILCLIS--SSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAglKYFVLGALSSGLFLfgcaLLCGTTGGLHLSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 163 QAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVIlKLAVYAIIRLIIPTLSdatvlyt 242
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVP-KLGIFSILVSIGLNVN------- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 243 pVVYVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIvggILYDRY 322
Cdd:MTH00196 154 -ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSI---ILALNV 229
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 391224043 323 HHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGE-LLSLTGAIGRSTILGCISAFSVLLSAAYMLKV 395
Cdd:MTH00196 230 YKNLIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKwLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
98-395 |
1.24e-10 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 63.63 E-value: 1.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 98 MCQDMLSFYVYFEI-SLApLFILIGLYgaNNRDKAADY---ILIYTLFSSLFMLLAIGTYEVLIGNTDYQAV---SLVVL 170
Cdd:COG1009 129 LSDNLLLLFVFWELvGLC-SYLLIGFW--YEKPSARRAarkAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaAPTIL 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 171 STDLQCILFLCISAGIMVKTPLVPVHTWLPvvHS-ESPLAGSMLL-AGVILKLAVYAIIRLIiPTLSDATVlYTPVVYVI 248
Cdd:COG1009 206 SSPLLTLILLLLLLGAFGKSAQFPLHFWLP--DAmEGPTPVSALLhAATMVKAGVYLLARLS-PLFALSPV-WLTVVAII 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 249 CAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGIlsnSLAGINGSLILSLAHGFVSPALFIIVGGILYdRYHHRLIY 328
Cdd:COG1009 282 GAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLAL---GVGAYVAALFHLLTHAFFKALLFLGAGSVIH-ATGTRDIR 357
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 329 YYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAI---GRSTILGCISAFSVLLSAAYMLKV 395
Cdd:COG1009 358 KMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRL 427
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
82-443 |
2.24e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 62.42 E-value: 2.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 82 YFELILNLGVILLINFMCQDMLSFYVYFEISLAPLFILIGLYgaNNRDKAADYILIYTLFSSL---FMLLAI----GTYE 154
Cdd:PRK08376 123 YYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFR--NDTWEAIEAGIKYMFVGSLassMVLLGIallyGQYG 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 155 VLigNTDYQAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAgVILKLAVYAIIRLII--- 231
Cdd:PRK08376 201 TL--NMAYLAVKMSENPTVVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAMLL-VIKQAGLYALARVLFsiy 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 232 -PTLSDATVLYtpVVYVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGI------------LSNSLAGINGSLI 298
Cdd:PRK08376 278 gPAINLATVGW--VIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLgvglaalgdpamASYGEIALAGGIY 355
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 299 LSLAHGFVSPALFIIVGGILYdRYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAIGRSTILG 378
Cdd:PRK08376 356 HIVNHALYKALLFLTAGAVIY-ETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILG 434
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 391224043 379 CISAFSVLLSAAYMLKVTNRLTGGIRTPYTALTSDCTYRESLLMIALIIPTLWYGLYPNGIINMI 443
Cdd:PRK08376 435 VIAMIGSVLTLASFVKVFHTAFFGPPSEKVMNVKEPPKPMLVPMLILAIAIIGMGLFPWQISDKL 499
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-395 |
9.40e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 57.27 E-value: 9.40e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 1 MTLIYILILAGVSIFSRLLPTYGKGLILVASILVVLPTMTD---------WEE-VGIYYTSDGIADIFILLTAYLLPLSI 70
Cdd:PRK07691 15 ITAILLIFLGKRPIIQRYVALIGSLLTLVAAIILVANVYKHgiqtlelgnWKApFGIVFVADMFAALLVLTSSIITFLVI 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 71 IANWNNIRS----LLYFELILNLGVILLINFMCQDMLSFYVYFEISLAPLFILIGLYGANNRDKAADYILIYTLFSSLFM 146
Cdd:PRK07691 95 LYSFQTIGIererYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLINVVSSAFF 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 147 LLAIGTYEVLIGNTDYQAVSLVVLSTDLQ--------CILFLCISAgimVKTPLVPVHTWLPVVHSESPLAGSMLLAGVI 218
Cdd:PRK07691 175 VVAVAILYSVVGTLNMADISVKIAELSAGqtglitvvAILFLFVFA---TKAGLFPLYFWLPGSYYAPPIAIAALFGALL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 219 LKLAVYAIIRLIIPTLSDATVLYTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLI 298
Cdd:PRK07691 252 TKVGVYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIY 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 299 LSLAHGFVSPALFIIVGGILYDRYHHRLiYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAIGR-STIL 377
Cdd:PRK07691 332 YLIHDMIVKAALFLLIGIMIKITGTTDL-KKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAgFYVS 410
|
410
....*....|....*...
gi 391224043 378 GCISAFSVLLSAAYMLKV 395
Cdd:PRK07691 411 GIIVLLSSLLVLYSVIKI 428
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
103-430 |
1.18e-08 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 56.91 E-value: 1.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 103 LSFYVYFEISLAPLFILIGLYGANNRDKAADYILIYTLFSSLFMLLAIGTYEVLIGNTDYQAVSLvvLSTDLQCILFLCI 182
Cdd:PRK06525 136 LGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSG--LHGSLKYLVFLGI 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 183 SAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRLIIpTLSDATVLYTPVVYVICAITIIYTSIITLR 262
Cdd:PRK06525 214 LFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQ-SMGPIPHVIGYVGAVMAIVTLLYGFLMYLP 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 263 QTDLKVIVAYSSISHMAVCILGILSNSLA---GINGSLILSLAHGFVSPALFIIVGGILYDrYHHRLIYYYQGLLTYMPI 339
Cdd:PRK06525 293 QQDMKRLLAYSTITQLGYMFFGLSLAILGsrlALEGSIAYIFNHAFAKSLFFLVAGALSYS-CGTRLLPRLRGVLKKLPL 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 340 LAIYLLILSFSNIGTPLTVNFIGELLSLTGAIGRSTILGCISAFSVLL------SAAYMLKVTNRLTGGIRTPYTALTSD 413
Cdd:PRK06525 372 VGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLliesvaSFAWFLRWFGRVVFGEPSEAVADAAP 451
|
330
....*....|....*..
gi 391224043 414 CTYRESLLMIALIIPTL 430
Cdd:PRK06525 452 LPGSMKLVLIVLIVMSL 468
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
101-396 |
7.54e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 54.93 E-value: 7.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 101 DMLSFYVYFEISLAPLFILIGLygaNNRD----KAADYILIYT------LFSSLFMLLAI-GTYEVlignTDYQAVSLVV 169
Cdd:PRK12647 116 NLITLFVFWELTSITSFLLIGF---NHEReaarRAALQALLVTgggglaLLAGLILLGNVtGTYSL----SELLASGDVI 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 170 LSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVhSESPLAGSMLL-AGVILKLAVYAIIRLIiPTLSDaTVLYTPVVYVI 248
Cdd:PRK12647 189 REHPLYLAILLLVLGGAFTKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARLN-PVLGG-TPLWQTILPLF 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 249 CAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFiIVGGILYDRYHHRLIY 328
Cdd:PRK12647 266 GGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALF-MVAGIIDHETGTRDIT 344
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 391224043 329 YYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIG-ELL--SLTGAIGRSTILGCISafsvLLSAAYMLKVT 396
Cdd:PRK12647 345 KLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAkELIyeALLEAPLWSLILTVAA----VLGNALMVAVA 411
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
101-370 |
8.30e-08 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 54.52 E-value: 8.30e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 101 DMLSFYVYFEISLAPLFILIGLYGANNRDKAADYILIYTLFSSLFMLLAIGTYEVLIGNTDYQAVslvvlsTDLQCILFL 180
Cdd:PRK12668 114 DLLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAI------AGLGGTAAW 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 181 CISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIR-----LIIPTLSDATVLYtPVVYVicaitiiy 255
Cdd:PRK12668 188 LILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARafpgtELLIYIGAAMAVY-GVFFA-------- 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 256 tsiitLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIVGGILYdRYHHRLIYYYQGLLT 335
Cdd:PRK12668 259 -----LLENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLFMSAGAVLY-RTGTEKLTELGGLYR 332
|
250 260 270
....*....|....*....|....*....|....*
gi 391224043 336 YMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGA 370
Cdd:PRK12668 333 SMPLTALFCLVGALSISAFPLFSGFVSKSMIISAA 367
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
85-382 |
5.76e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 51.56 E-value: 5.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 85 LILNLGVILLINfmCQDMLSFYVYFEISLAPLFILIGL--YGANNRDKAADYILIYTLFSSLFmLLAIGTYEVLIGNTDY 162
Cdd:MTH00199 104 LIVALGSLLLVS--SINWLSIYLAIELQTLTLFILVALkrDSAYSTEAGLKYFVLGAVSSGLF-LFGCALLYGLTGETSI 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 163 QAVSLVvLSTDLQCILflcISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAgVILKLAVYAIIRLIIPTlsDATVLYT 242
Cdd:MTH00199 181 QGINSI-LTGDVGKIL---ITISLLFKLSAAPFHMWAPDVYEGAPTITTALLA-TVPKIGVFSILVQIGPV--TNVVLIC 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 243 PVVYVICAITIIytsiitLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIvggILYDRY 322
Cdd:MTH00199 254 AVLSIIYGAIGA------LNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMIIYVIMSICSFSI---ILSLKL 324
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 323 HHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAIGRSTILGCISA 382
Cdd:MTH00199 325 TKGLIVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIA 384
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
166-396 |
4.95e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 48.34 E-value: 4.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 166 SLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVHSESPLaGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYtpvv 245
Cdd:MTH00144 74 SLIMYNLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSW-LSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLC---- 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 246 yVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIVGGILYDryhhr 325
Cdd:MTH00144 149 -VISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKD----- 222
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 391224043 326 liyYYQGLLTYMPILAIYLLILSFSniGTPLTVNFIGELLSLTGAI-GRSTILGCISAFSVLLSAAYMLKVT 396
Cdd:MTH00144 223 ---LGSLKPSYKTGLSIISLLLSLG--GLPPFLGFCSKLLVLISSMeSSPLLLILLLLLGSLISLFFYLSVF 289
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
146-394 |
8.50e-06 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 48.15 E-value: 8.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 146 MLLAIGTYEVLIGNTDYQAVSLVVLSTDLQCILFLC--ISAGIMVKTPLVPVHTWLPVVhSESPLAGSMLL-AGVILKLA 222
Cdd:MTH00020 178 LLLAMFLLWDRFGSLDFSSVFNMVVSAPSSDITLIClfLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIhAATMVTAG 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 223 VYAIIRLiiPTLSDATVLYTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSISHMA--VCILGILSNSLagingSLILS 300
Cdd:MTH00020 257 VFLLIRS--SPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGymVVACGLSHYSI-----SLFHL 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 301 LAHGFVSPALFIIVGGILYDRYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAIGRS--TILG 378
Cdd:MTH00020 330 MNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYylIFAY 409
|
250
....*....|....*.
gi 391224043 379 CISAFSVLLSAAYMLK 394
Cdd:MTH00020 410 WLGCFSALLTAFYSIR 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
59-371 |
8.65e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 44.85 E-value: 8.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 59 ILLTayLLPLSIIANWNNIRSLLYFELILNLGVILLINfmCQDMLSFYVYFEISLAPLFILIGLYGANNRDKAADY---- 134
Cdd:MTH00198 171 ILLS--LMGLLFLTNERGPRSGFALVLIVGLGGLLLIE--SANWLTIYLALEFQTLALFILAGEGSQPGSHFPSPGntpp 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 135 -----ILIYTLFSSLFMLLAIGTYEVLIGNTDYQA--VSLVVLSTDLQ----CILFLCISAGIMVKTPLVPVHTWLPVVH 203
Cdd:MTH00198 247 esglkYWILGAMSSGFYLFGCALYFGFTGNEGMLGtiLSATLETTNIElrqgSLGYLFITVAILFKLAAAPFHMWTPDVY 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 204 SESPLAGSMLLAgVILKLAVYAIIRLIIPTlsdatvlyTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCIL 283
Cdd:MTH00198 327 EGAPTPTTALIA-IIPKFTVYILLTSLVIT--------SKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILI 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 284 GILSNSLAGINGSLILSLAHGFVSPALFIIV-----GGILY---------DRYHHRL--IYYYQGLLTYMPILAIYLLIL 347
Cdd:MTH00198 398 GVSAGTYESLQASWTYAVTYLVSALASFTVIctleeFGTRTptsrqrdgsFGNYNLVrrLVDLTILSRGQPYIAFSLAIV 477
|
330 340
....*....|....*....|....
gi 391224043 348 SFSNIGTPLTVNFIGELLSLTGAI 371
Cdd:MTH00198 478 FLSLAGIPPLLGFLGKWFILVGSI 501
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
101-361 |
2.21e-04 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 43.88 E-value: 2.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 101 DMLSFYVYFEISLAPLFILIGLYGANNRDKAADyILIYTLFSSLFMLLAIGTYEVLIGNTDYQAVslvvLSTD------- 173
Cdd:PRK12650 131 DVVVLFVAWELVSLASFFLIARSGSGGEAGSIR-TLILTFFGGLTLLAAVAIAATQTGTTSLSGI----LHSDvwaekpg 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 174 LQCILFLCISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRLIiPTLSDATVLYtpVVYVICAITI 253
Cdd:PRK12650 206 LTTVVAVLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFS-PVFHDVAVWN--WLLIIVGMIT 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 254 IYT-SIITLRQTDLKVIVAYSSISHMA--VCILGIlsNSLAGINGSLILSLAHGFVSPALFIIVgGILYDRYHHRLIYYY 330
Cdd:PRK12650 283 ALMgAVFAVQKTDLKKLTAYSTVSQLGwiVATIGV--GTPFALTAAVVHTLAHALFKSSLFMLI-GVVDHQAGTRDIRRL 359
|
250 260 270
....*....|....*....|....*....|.
gi 391224043 331 QGLLTYMPILAIYLLILSFSNIGTPLTVNFI 361
Cdd:PRK12650 360 GSLWRRMPFTFVSVTIAALSMAAVPPLFGFV 390
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
135-367 |
2.22e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 43.79 E-value: 2.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 135 ILIYTLFSSL-FMLLAIGTYEVLIGNTDYQAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVHSESPLAGSML 213
Cdd:MTH00032 183 VLIYKTIGSLdFLTFNGGSVGSGIMDRGYYGGGAYESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALI 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 214 LAGVILKLAVYAIIRLIipTLSDATVLYTPVVYVICAITIIYTSIITLRQTDLKVIVAYSSISHMAVCILGIlsnslaGI 293
Cdd:MTH00032 263 HAATMVTAGVFLMIRSF--PLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLII------GI 334
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 391224043 294 NGSLILSL----AHGFVSPALFIIVGGILYD-RYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSL 367
Cdd:MTH00032 335 EGSHNVGLfhlvNHAFFKALLFLSAGSVIHStTVDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
46-355 |
4.22e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 42.71 E-value: 4.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 46 GIYYTSDGIADIFILLTAYLLPLSIIANWN-NIRSLLYFELILNLGVILLINFMCQDMLSFYVYFEISLAPLFILIGLYG 124
Cdd:PRK06277 65 GITYLFNPAKQIIIFVLSLIASLVLITGLGeKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASG 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 125 ANNRDKAADYILIYTLFSSLFMLLAIGTYEVLIGN---TDYQAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPV 201
Cdd:PRK06277 145 TEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTlniTDIHNALLVNPTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSD 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 202 VHSESPLAGSMLLAG--VILKLAVYAIIRLIIPTLSDATVLYTpVVYVICAITIIYTSIITLRQTDLKVIVAYSSISHMA 279
Cdd:PRK06277 225 IYAKAKPFGSALLQTfsKFVLVALMLVIFKLFGGLSYFPSAQG-VLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGG 303
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 391224043 280 VCILGILSNSLAGINGSLILSLAHGFVSPALFIIVGGILYDRYHHRLiYYYQGLLTYMPILAIYLLILSFSNIGTP 355
Cdd:PRK06277 304 YVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNL-RKLGGLLPVMPVVAFMVLCAKLAISGVP 378
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
176-391 |
5.07e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 39.22 E-value: 5.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 176 CILFLCISAGIMVKTPLVPVHTWLP-VVHSESPL-----AGSMLLAGVILklavyaIIRliIPTLSDATVLYTPVVYVIC 249
Cdd:MTH00210 211 TIICLLLFIGAVGKSAQLGLHTWLPdAMEGPTPVsalihAATMVTAGVFL------IIR--SGPLFEGSPLALTIVTILG 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 250 AITIIYTSIITLRQTDLKVIVAYSSISHMA--VCILGILSNSLagingSLILSLAHGFVSPALFIIVGGILYDRYHHRLI 327
Cdd:MTH00210 283 ALTAFFAATVGVVQNDLKKVIAYSTCSQLGymVMVCGISNYST-----SLFHLMNHAFFKALLFLSAGSVIHAVSDEQDM 357
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 391224043 328 YYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAIGRSTILGC--ISAFSVLLSAAY 391
Cdd:MTH00210 358 RKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAywLGSFSALLTAFY 423
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
106-396 |
5.43e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 39.35 E-value: 5.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 106 YVYFEISLAPLFILIGlYGANNRDKAADYI--LIYTLFSSLFMLLAIGTYEVLIGN---TDYQAVSLVVLSTDLQCILFL 180
Cdd:PRK12646 136 YVFWELTSVSSFLLIS-YWYNNGDSQFGAIqsFMITVFGGLALLVGFIMLYIMTGTnniTEILGQADHIKNHGLFIPMIF 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 181 CISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRLIiPTLSDATVlYTPVVYVICAITIIYTSIIT 260
Cdd:PRK12646 215 MFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFT-PLLGLSNM-YIYIVTFVGLITMLFGSITA 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 261 LRQTDLKVIVAYSSISH--MAVCILGI-------LSNSLAGINGSLILS-----LAHGFVSPALFIIVgGILYDRYHHRL 326
Cdd:PRK12646 293 LKQWDLKGILAYSTISQlgMIMAMVGIgggyaqhQQDAIASIYVFVLFAalfhlMNHAIFKCALFMGV-GIIDHEAGTRD 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 327 IYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAIGRS-------------TILGCISAFSVLLSAAYML 393
Cdd:PRK12646 372 IRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGqlsqfslismiiiVFIGVIASIFTFTYALYMV 451
|
...
gi 391224043 394 KVT 396
Cdd:PRK12646 452 KEV 454
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
146-363 |
7.77e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 38.65 E-value: 7.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 146 MLLAIGTYEVL--IGNTDYQAVSLVVLSTDLQCILFLCISAGIMVKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAV 223
Cdd:PRK08042 148 LLLAIACWLLWqrYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGL 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 224 YAIirLIIPTLSDATVLYTPVVYVICAITIIYT-SIITLRQTDLKVIVAYSSISHMAVCILGI--------LSNS---LA 291
Cdd:PRK08042 228 LGI--LTLSLLGGNAPLWWGVALLVLGMITAFVgGLYALMEHNIQRLLAYHTLENIGIILLGLgagvtgiaLEQPaliAL 305
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 391224043 292 GINGSLILSLAHGFVSPALFIIVGGILYdRYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGE 363
Cdd:PRK08042 306 GLVGGLYHLLNHSLFKSVLFLGAGSVWF-RTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGE 376
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
89-355 |
9.44e-03 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 38.37 E-value: 9.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 89 LGVILLINfmcqdMLSFYVYFEISLAPLFILIGLYgaNNRDKA---ADYILIYTLFSSLFML-------LAIGTYEV--L 156
Cdd:PRK12645 124 LGVVLSDN-----LIVLYLFWELTSISSFLLISYW--YEREASrygAQKSMLITVFGGLSMLggfillyIMTGSFSIreM 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 157 IGNTD-YQAVSLVVLSTdlqcILFLcisAGIMVKTPLVPVHTWLPVVhSESPLAGSMLL-AGVILKLAVYAIIRLIIPTL 234
Cdd:PRK12645 197 IANADeIQNSPLFIPAM----ILIL---LGAFTKSAQFPFYIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVARFTPIFA 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 391224043 235 SDATVLYTpvVYVICAITIIYTSIITLRQTDLKVIVAYSSISH--MAVCILGILSNSLA-GINGSLILSLA--------- 302
Cdd:PRK12645 269 GSQVWFWT--VTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQlgLIMSLLGIGAASLHyQGDDSKIYAAAitaaifhli 346
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 391224043 303 -HGFVSPALFIIVGGILYD---RYHHRLiyyyQGLLTYMPILAIYLLILSFSNIGTP 355
Cdd:PRK12645 347 nHATFKGSLFMIVGIVDHEtgtRDIRKL----GGLMTIMPITFTIALIGALSMAGLP 399
|
|
| |
