|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-446 |
1.90e-145 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 422.26 E-value: 1.90e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 1 MLKFIFFIVFMTPLCFFINYWYIL-SFLFLGSFIYLVFGYLNFFVCNIDYYFCSDVLSYGFILLSFWICCLMFLSSGSVY 79
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVqSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 80 NHYNFFLFLFSLVLLLLFFLVLTFSTSSLFMFYLFFESSLIPTFFLILGWGYQPERMQAGIYLLFYTLFASLPLLISIFN 159
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 160 FYFTLNTLNIYmcFFLLNLDFGFYVYISMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLI 239
Cdd:MTH00163 161 LYNNSGSLSFF--LLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFF 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 240 FKLGSTFNIMIVGVSLLGGLLVSLICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLA 319
Cdd:MTH00163 239 SKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 320 NISYERVGSRSLLINKGLMNLMPSMGLWWFLLCSANMAAPPTLNLLGEISLLNGIISWSWISLFVVCLLSFFSAAYTLYL 399
Cdd:MTH00163 319 NIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYL 398
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 827046112 400 YSFSQHGKIFSCVYSLNSGYLREYLLLFLHWIPLNLFIVKFNLLFDW 446
Cdd:MTH00163 399 YSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
49-447 |
4.37e-112 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 336.04 E-value: 4.37e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 49 YYFCSDVLSYGFILLSFWICCLMFLSSGSVYNHYNFFLFLFSLVLLLLFFLVLTFSTSSLFMFYLFFESSLIPTFFLILG 128
Cdd:MTH00150 18 ELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLILG 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 129 WGYQPERMQAGIYLLFYTLFASLPLLISIFNFYFTLNTLNIYMCFFLLNLDFGF-YVYISMVLAFLVKMPMFIFHLWLPK 207
Cdd:MTH00150 98 WGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMgLWGLLVFLAFLVKLPMYPFHLWLPK 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 208 AHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFKLGSTFNIMIVGVSLLGGLLVSLICLRQVDLKSLIAYSSVAHMGIVL 287
Cdd:MTH00150 178 AHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 288 GGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKGLMNLMPSMGLWWFLLCSANMAAPPTLNLLGE 367
Cdd:MTH00150 258 AGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSE 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 368 ISLLNGIISWSWISLFVVCLLSFFSAAYTLYLYSFSQHGKIFSCVYSLNSGYLREYLLLFLHWIPLNLFIVKFNLLFDWL 447
Cdd:MTH00150 338 IMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLLFMWI 417
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-444 |
3.46e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 335.03 E-value: 3.46e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 1 MLKFIFFIVFMTPLCFFINYWYILSFLFLGSFIYLVFGYLNFFV--CNIDYYFCSDVLSYGFILLSFWICCLMFLSSGSV 78
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLmtSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 79 YNHYNFFLFLFSLVLLLLFFLVLTFSTSSLFMFYLFFESSLIPTFFLILGWGYQPERMQAGIYLLFYTLFASLPLLISIF 158
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 159 NFYFTLNTLNIYMCFFLLNLDF-GFYVYISMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFS 237
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFyLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 238 LIFKLGSTFNIMIVGVSLLGGLLVSLICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFC 317
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 318 LANISYERVGSRSLLINKGLMNLMPSMGLWWFLLCSANMAAPPTLNLLGEISLLNGIISWSWISLFVVCLLSFFSAAYTL 397
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 827046112 398 YLYSFSQHGKIFSCVYSLNSGYLREYLLLFLHWIPLNLFIVKFNLLF 444
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-447 |
1.98e-107 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 325.54 E-value: 1.98e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 1 MLKFIFFIVFMTPLCFFINYWY----ILSFLFLGSFIYLVFGYLNFFVCNIDYYFCSDVLSYGFILLSFWICCLMFLSSG 76
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSwaltFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 77 SVYNHYNFFLFLFSLVLLLLFFLVLTFSTSSLFMFYLFFESSLIPTFFLILGWGYQPERMQAGIYLLFYTLFASLPLLIS 156
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 157 IFNFYFTLNTLNIYMCFFLLNLDFGF-YVYISMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRV 235
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSSMEPPSIYLMnLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 236 FSLIFKLGSTFNIMIVGVSLLGGLLVSLICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGM 315
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 316 FCLANISYERVGSRSLLINKGLMNLMPSMGLWWFLLCSANMAAPPTLNLLGEISLLNGIISWSWISLFVVCLLSFFSAAY 395
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 827046112 396 TLYLYSFSQHGKIFSCVYSLNSGYLREYLLLFLHWIPLNLFIVKFNLLFDWL 447
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNWL 452
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
105-439 |
1.92e-98 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 302.50 E-value: 1.92e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 105 TSSLFMFYLFFESSLIPTFFLILGWGYQPERMQAGIYLLFYTLFASLPLLISIFNFYFTLNTLNIYMCF----FLLNLDF 180
Cdd:MTH00124 112 ATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMLQlthpTLTNSWT 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 181 GFYVYISMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFKLGSTFNIMIVGVSLLGGLL 260
Cdd:MTH00124 192 NLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFLTLALWGALM 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 261 VSLICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKGLMNL 340
Cdd:MTH00124 272 TSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLL 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 341 MPSMGLWWFLLCSANMAAPPTLNLLGEISLLNGIISWSWISLFVVCLLSFFSAAYTLYLYSFSQHGKIFSCVYSLNSGYL 420
Cdd:MTH00124 352 LPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLSTQRGTLPTHITTIQPTHT 431
|
330
....*....|....*....
gi 827046112 421 REYLLLFLHWIPLNLFIVK 439
Cdd:MTH00124 432 REHLLMTLHIIPLLLLILK 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-444 |
1.78e-95 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 294.96 E-value: 1.78e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 1 MLKFIFFIVFMTPLCFFINYWYILSFLFLGSF------IYLVFGYLNFFVCNIDYYFCSDVLSYGFILLSFWICCLMFLS 74
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSlisllsLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 75 SGSVYNHYNFFLFLFSLVLLLLFFLVLTFSTSS--LFMFYLFFESSLIPTFFLILGWGYQPERMQAGIYLLFYTLFASLP 152
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSleLILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 153 LLISIFNFYFTLNTLNIYMcFFLLNLDFGFYVYISM-----VLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKL 227
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPL-SELNWLTSLSSNSSSIwwifcILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 228 GGYGLLRVFSlIFKLGSTFNI--MIVGVSLLGGLLVSLICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLM 305
Cdd:MTH00044 240 GGYGLIRLIN-LFSLPSANNIsfILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILM 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 306 IAHGLCSSGMFCLANISYERVGSRSLLINKGLMNLMPSMGLWWFLLCSANMAAPPTLNLLGEISLLNGIISWSWISLFVV 385
Cdd:MTH00044 319 IAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPII 398
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 827046112 386 CLLSFFSAAYTLYLYSFSQHGKIFSCVYSLNSGYLREYLLLFLHWIPLNLFIVKFNLLF 444
Cdd:MTH00044 399 GLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
105-447 |
2.33e-89 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 279.11 E-value: 2.33e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 105 TSSLFMFYLFFESSLIPTFFLILGWGYQPERMQAGIYLLFYTLFASLPLLISIFNFYFTLNTLNIYMCFFLLNLDFGFYV 184
Cdd:MTH00068 112 ATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLILLELMSPMQLMTYT 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 185 ----YISMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFKLGSTFNIMIVGVSLLGGLL 260
Cdd:MTH00068 192 nkiwWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKELSYPFIILALWGVLM 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 261 VSLICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKGLMNL 340
Cdd:MTH00068 272 TSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTI 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 341 MPSMGLWWFLLCSANMAAPPTLNLLGEISLLNGIISWSWISLFVVCLLSFFSAAYTLYLYSFSQHGKIFSCVYSLNSGYL 420
Cdd:MTH00068 352 LPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNHLKTLFPTYT 431
|
330 340
....*....|....*....|....*..
gi 827046112 421 REYLLLFLHWIPLNLFIVKFNLLFDWL 447
Cdd:MTH00068 432 REHLLLALHILPMLLLILKPELISGMF 458
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
4-443 |
9.01e-88 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 274.89 E-value: 9.01e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 4 FIFFIVFMTPLCFFINYWYILSFLFLGSFIYLVFGYLNFFVCNIDYYFCSDVLSYGFILLSFWICCLMFLSSGSVYNHYN 83
Cdd:MTH00206 8 MLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEP 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 84 FFL--FLFSLVLLLLFFLVLTFSTSSLFMFYLFFESSLIPTFFLILGWGYQPERMQAGIYLLFYTLFASLPLLISIFNFY 161
Cdd:MTH00206 88 INRqrIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQ 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 162 FTLNTLNIYMCFFLLNLD-FGFYVYISMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIF 240
Cdd:MTH00206 168 NSLGSLSLYILYFSKLTTwNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILG 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 241 KLGSTFNIMIVGVSLLGGLLVSLICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLAN 320
Cdd:MTH00206 248 PSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLAN 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 321 ISYERVGSRSLLINKGLMNLMPSMGLWWFLLCSANMAAPPTLNLLGEISLLNGIISWSWISLFVVCLLSFFSAAYTLYLY 400
Cdd:MTH00206 328 LLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMF 407
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 827046112 401 SFSQHGKIFSCVYSLNSGYLREYLLLFLHWIPLNLFIVKFNLL 443
Cdd:MTH00206 408 VMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-436 |
5.92e-83 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 262.52 E-value: 5.92e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 1 MLKFIFFIVFMTPLCFFINYWYI----LSFLFLGSFIYLVFGY-LNFFVCNIDYYFCSDVLSYGFILLSFWICCLMFLSS 75
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIwintTTYSLLISLISLLLLNqPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 76 GSVYNHYNFFL--FLFSLVLLLLFFLVLTFSTSSLFMFYLFFESSLIPTFFLILGWGYQPERMQAGIYLLFYTLFASLPL 153
Cdd:MTH00110 81 QHHLSKEPLTRkkLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 154 LISIFNFYFTLNTLNI-YMCFFLLNLDFGF---YVYISMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGG 229
Cdd:MTH00110 161 LVALLYIQNNLGSLNFlLLQLWAQPLPNSWsnnLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 230 YGLLRVFSLIFKLGSTFNIMIVGVSLLGGLLVSLICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHG 309
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 310 LCSSGMFCLANISYERVGSRSLLINKGLMNLMPSMGLWWFLLCSANMAAPPTLNLLGEISLLNGIISWSWISLFVVCLLS 389
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 827046112 390 FFSAAYTLYLYSFSQHGKIFSCVYSLNSGYLREYLLLFLHWIPLNLF 436
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLL 447
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
46-446 |
6.16e-82 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 259.89 E-value: 6.16e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 46 NIDYYFCSDVLSYGFILLSFWICCLMFLSSgsvYNHY-----NFFLFLFSLVLLLLFFLVLTFSTSSLFMFYLFFESSLI 120
Cdd:MTH00127 52 SLNLYMATDPLSTPLLVLTCWLLPLMILAS---QNHTapepiNRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLI 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 121 PTFFLILGWGYQPERMQAGIYLLFYTLFASLPLLISIFNFYFTLNTLNI----YMCFFLLNLDFGFYVYISMVLAFLVKM 196
Cdd:MTH00127 129 PTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMltlqYSQPLQLSSWADKLWWAGCLLAFLVKM 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 197 PMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFKLGSTFNIMIVGVSLLGGLLVSLICLRQVDLKSLIA 276
Cdd:MTH00127 209 PLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIA 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 277 YSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKGLMNLMPSMGLWWFLLCSANM 356
Cdd:MTH00127 289 YSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANL 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 357 AAPPTLNLLGEISLLNGIISWSWISLFVVCLLSFFSAAYTLYLYSFSQHGKIFSCVYSLNSGYLREYLLLFLHWIPLNLF 436
Cdd:MTH00127 369 ALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLL 448
|
410
....*....|
gi 827046112 437 IVKFNLLFDW 446
Cdd:MTH00127 449 ILKPELIWGW 458
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
107-389 |
3.42e-51 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 174.81 E-value: 3.42e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 107 SLFMFYLFFESSLIPTFFLILGWGYQPERMQAGIYLLFYTLFASLPLLISIFNFYFTLNTLNIY----MCFFLLNLDFGF 182
Cdd:pfam00361 3 DLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskALTGGLNSSGLL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 183 YVYISMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFKLGSTFNIMIVGVSLLGGLLVS 262
Cdd:pfam00361 83 LLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLGS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 263 LICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLA-NISYERVGSRSLLINKGLMNLM 341
Cdd:pfam00361 163 LAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAKTM 242
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 827046112 342 PSMGLWWFLLCSANMAAPPTLNLLGEISLLNGIISWSWISLFVVCLLS 389
Cdd:pfam00361 243 PILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
108-400 |
7.31e-48 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 171.03 E-value: 7.31e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 108 LFMFYLFFESSLIPTFFLILGWGYqPERMQAGIYLLFYTLFASLPLLISIFNFYFT--LNTLNIymcFFLLNLDFG---- 181
Cdd:COG1008 133 LFLFYVFWELMLIPMYFLIGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLagALTFDI---AELAAAPLPltaq 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 182 FYVYISMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRvFSL-IFKLGS-TFNIMIVGVSLLGGL 259
Cdd:COG1008 209 LLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLR-FALpLFPEASaYFAPLLAALGVIGII 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 260 LVSLICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKGLMN 339
Cdd:COG1008 288 YGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAK 367
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 827046112 340 LMPSMGLWWFLLCSANMAAPPTLNLLGEISLLNGIISWSWISLFVVCLLSFFSAAYTLYLY 400
Cdd:COG1008 368 RMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
108-400 |
1.07e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 162.54 E-value: 1.07e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 108 LFMFYLFFESSLIPTFFLILGWGYQPERMQAGIYLLFYTLFASLPLLISIFNFYFTLNTLNiYMCFFLLNLDFG--FYVY 185
Cdd:MTH00204 134 LLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTD-YQILLNIKLPLSiqKWLL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 186 ISMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFKLGST-FNIMIVGVSLLGGLLVSLI 264
Cdd:MTH00204 213 VGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEyFAPLIVMLSVIAVIYGSLT 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 265 CLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKGLMNLMPSM 344
Cdd:MTH00204 293 TCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLF 372
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 827046112 345 GLWWFLLCSANMAAPPTLNLLGEISLLNGIISWSWISLFVVCLLSFFSAAYTLYLY 400
Cdd:MTH00204 373 VIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
108-400 |
5.82e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 160.22 E-value: 5.82e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 108 LFMFYLFFESSLIPTFFLILGWGYQPERMQAGIYLLFYTLFASLPLLISIFNFYFTLNTLNI-YMCFFLLNLDFGFYVYI 186
Cdd:MTH00217 131 LVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYqALCCLKIEKELQYFIFL 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 187 SMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFKLGST-FNIMIVGVSLLGGLLVSLIC 265
Cdd:MTH00217 211 GFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEyFSPLIQTLSLLAIIYGSLTT 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 266 LRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKGLMNLMPSMG 345
Cdd:MTH00217 291 CRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFG 370
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 827046112 346 LWWFLLCSANMAAPPTLNLLGEISLLNGIISWSWISLFVVCLLSFFSAAYTLYLY 400
Cdd:MTH00217 371 ILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
108-428 |
2.13e-42 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 156.52 E-value: 2.13e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 108 LFMFYLFFESSLIPTFFLILGWGYqPERMQAGIYLLFYTLFASLPLLISIFNFYFT----LNTLNIymcFFLLNLDFGFY 183
Cdd:PRK05846 133 LLLFYVFFEAMLIPMYFLIGVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDI---ADLLNLPLPPG 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 184 VYISMVLAFL----VKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRvFSL-IFKLGST-FNIMIVGVSLLG 257
Cdd:PRK05846 209 VQYWLFLAFFiafaVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLR-FSLpLFPDASHeFAPIIITLGVIA 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 258 GLLVSLICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKGL 337
Cdd:PRK05846 288 IIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGL 367
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 338 MNLMPSMGLWWFLLCSANMAAPPTLNLLGEISLLNGIISWSWISLFVVCLLSFFSAAYTLYLYSFSQHGKIFSCVYSLNS 417
Cdd:PRK05846 368 AKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKD 447
|
330
....*....|.
gi 827046112 418 GYLREYLLLFL 428
Cdd:PRK05846 448 LNGRELLILLP 458
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
108-400 |
2.20e-41 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 153.17 E-value: 2.20e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 108 LFMFYLFFESSLIPTFFLILGWGyQPERMQAGIYLLFYTLFASLPLLISIFNFYF-TLNTLNIYMcffLLNLDFGFYV-- 184
Cdd:TIGR01972 128 LFLFYVFWEAMLIPMYLLIGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFlGGGTFDLLE---LLNLPLPFGVqt 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 185 --YISMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFKLGST-FNIMIVGVSLLGGLLV 261
Cdd:TIGR01972 204 wlFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLyFAPVLAALGVIAIIYG 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 262 SLICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKGLMNLM 341
Cdd:TIGR01972 284 ALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKM 363
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 827046112 342 PSMGLWWFLLCSANMAAPPTLNLLGEISLLNGIISWSWISLFVVCLLSFFSAAYTLYLY 400
Cdd:TIGR01972 364 PVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
108-399 |
5.99e-41 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 152.77 E-value: 5.99e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 108 LFMFYLFFESSLIPTFFLILGWGYQPERMQAGIYLLFYTLFASLPLLI---SIFNFYFTLNTLNIYMCFFLLNLDFGFYV 184
Cdd:MTH00226 153 IFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLclfSLYNIHGTTDYLTLASCSHVVSEQTQKWI 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 185 YISMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFKLGS-TFNIMIVGVSLLGGLLVSL 263
Cdd:MTH00226 233 FLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAqNLAPAVIAMGIVGIVYGSF 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 264 ICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKGLMNLMPS 343
Cdd:MTH00226 313 ATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPI 392
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 827046112 344 MGLWWFLLCSANMAAPPTLNLLGEISLLNGIISWSWISLFVVCLLSFFSAAYTLYL 399
Cdd:MTH00226 393 WGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYF 448
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
14-437 |
2.11e-31 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 124.25 E-value: 2.11e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 14 LCFFINYWYILSFLFLGSFIYLVFGYLNFFVCnidyYFCSDVLSYGFILLSFWICCLMFLSSGSVYNhynfflfLFSLVL 93
Cdd:MTH00094 1 LSLLFFFSPFLFFLFLMFFSFLMFNNYSWSGL----FFFFDSFVFVLLIFMMVFILGLVLLSEKNFN-------LLILSN 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 94 LLLFFLVLTFSTSSLFMFYLFFESSLIPTFFLILGWGYQPERMQAGIYLLFYTLFASLPLLISIFNFYFtlntlniYMCF 173
Cdd:MTH00094 70 LLILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFF-------FFSL 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 174 FLLNLDFGFYVYISMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFsliFKLGSTFNIMIVGV 253
Cdd:MTH00094 143 CYFDFFLSWEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRIL---GSLNFVYNNFWIIF 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 254 SLLGGLLVSLICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLI 333
Cdd:MTH00094 220 SLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYF 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 334 NKGLMNLMPSMGLWWFLLCSANMAAPPTLNLLGEISLLNGIISWSWISLFVVCLLSFFSAAYTLYLYSFSQHGKIFSCVY 413
Cdd:MTH00094 300 MNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFN 379
|
410 420
....*....|....*....|....
gi 827046112 414 SLNSGYLREYLLLFLHWIPLNLFI 437
Cdd:MTH00094 380 NFNVGLSLPLVFMMFNMFWLSLFY 403
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
54-404 |
1.88e-28 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 116.40 E-value: 1.88e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 54 DVLSYGFILLSFWICCLMFLSSGSVYNHYNFFLFLFSLVLLLLFFLVLTFSTSSLFMFYLFFESSLIPTFFLILGWGYqP 133
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGT-K 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 134 ERMQAGIYLLFYTLFASLPLLISIFNFYFTLNTLNIY-MCFFLLNLDFG--FYVYISMVLAFLVKMPMFIFHLWLPKAHV 210
Cdd:COG0651 154 EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMAdLAARLAELDPGllLAAFALLLVGFGIKAALFPLHFWLPDAYP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 211 EAPVAGSMILAGVLLKLGGYGLLRVFSLIFK--LGSTFNIMIVGVSLLGGLLVSLICLRQVDLKSLIAYSSVAHMGIVLG 288
Cdd:COG0651 234 AAPSPVSALLSGLLTKVGVYAILRVLTLLFGadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 289 GLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKGLMNLMPSMGlWWFLLCSANMAA-PPTLNLLGE 367
Cdd:COG0651 314 GLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTA-AAFLIGALALAGlPPLSGFVSK 392
|
330 340 350
....*....|....*....|....*....|....*...
gi 827046112 368 ISLLNGII-SWSWISLFVVCLLSFFSAAYTLYLYSFSQ 404
Cdd:COG0651 393 WLLLQAALeAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
108-376 |
1.51e-24 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 105.88 E-value: 1.51e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 108 LFMFYLFFESSLIPTFFLILGWGYQPERMQAGIYLLfYTLFASLPLLISIFN--FY---FTLNTLNIYMCFFLLNldFGF 182
Cdd:PRK12561 109 LLLFFLMWELELVPVYLLISIWGGQKRLYAATKFIL-YTALASIFILVAGLAlaLSgdtFTFDLAELGAKSYPLA--LEL 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 183 YVYISMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRvfsliFKLGSTFNIMIVGVSLLGGLLVS 262
Cdd:PRK12561 186 LLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIR-----FNVQMLPDAHVYFAPALAILGVV 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 263 LI------CLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKG 336
Cdd:PRK12561 261 NIiygalnAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGG 340
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 827046112 337 LMNLMPSMGLWWFLLCSANMAAPPTLNLLGEISLLNGIIS 376
Cdd:PRK12561 341 LAKVMPKTFALFTASSMASLALPGMSGFVSELTVFLGITS 380
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
108-369 |
6.37e-21 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 95.15 E-value: 6.37e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 108 LFMFYLFFESSLIPTFFLILGWGYQpERMQAGIYLLFYTLFASLPLLISIFNFY-------FTLNTLNIYmcffLLNLDF 180
Cdd:PRK06473 129 LLLFFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVwlsgassFDYEPLRSH----TLPLST 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 181 GFYVYISMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRV-FSLIFKLGSTFNIMIVGVSLLGGL 259
Cdd:PRK06473 204 QLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFgVGLFPEAWVYLAPWLATWAVVSVL 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 260 LVSLICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKGLMN 339
Cdd:PRK06473 284 YGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLN 363
|
250 260 270
....*....|....*....|....*....|
gi 827046112 340 LMPSMGLWWFLLCSANMAAPPTLNLLGEIS 369
Cdd:PRK06473 364 PERGLPITGSLMILGVMASAGIPGMVGFIA 393
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
108-359 |
1.25e-18 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 88.23 E-value: 1.25e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 108 LFMFYLFFESSLIPTFFLILGWGYQpERMQAGIYLLFYTLFASLPLLISIFNFYFTLNTLNIYMCFFLLN---LDFGFYV 184
Cdd:PRK02546 137 MLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKdfgLGFQLLC 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 185 YISMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRV-FSLIFKLGSTFNIMIVGVSLLGGLLVSL 263
Cdd:PRK02546 216 YAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAAL 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 264 ICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKGLMNLMPS 343
Cdd:PRK02546 296 TSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRK 375
|
250
....*....|....*.
gi 827046112 344 MGLWWFLLCSANMAAP 359
Cdd:PRK02546 376 MFAMWTACSLASLALP 391
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
108-393 |
4.15e-18 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 86.54 E-value: 4.15e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 108 LFMFYLFFESSLIPTFFLILGWGYQpERMQAGIYLLFYTLFASLPLLISIFNFYF------TLNTLNIYMCFFLLNLDFG 181
Cdd:CHL00011 134 LLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGLygsnepTLNFETLANQSYPVALEIL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 182 FYvyISMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRV-FSLIFKLGSTFNIMIVGVSLLGGLL 260
Cdd:CHL00011 213 FY--IGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSIFSPWLVIVGAIQIIY 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 261 VSLICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKGLMNL 340
Cdd:CHL00011 291 AASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIP 370
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 827046112 341 MPSMGLWWFLLCSANMAAPPTLNLLGEISLLNGIISWSWISLFVVCLLSFFSA 393
Cdd:CHL00011 371 MPKIFTMFSSFSMASLALPGMSGFVAELIVFFGIITSQKYLLMPKILITFVMA 423
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
105-399 |
2.51e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 84.16 E-value: 2.51e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 105 TSSLFMFYLFFESSLIPTFFLIlGWGYQPERMQAGIYLLFYTLFASLPLLISIFNFYFTLNTLNIYMCFFLL----NLDF 180
Cdd:PRK08375 125 TADLFNLFVFLEIMSLSSYALV-AMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALaenpTVVT 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 181 GFYVyisMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFKLGS----TFNIMIVGVSLL 256
Cdd:PRK08375 204 AFGF---VLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFrfalGLGWLLAVLALL 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 257 GGLLVSLICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKG 336
Cdd:PRK08375 281 SMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSG 360
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 827046112 337 LMNLMPSMGLWWFLLCSANMAAPPTLNLLGEISLLNGIIS-WSWISLFVVCLLSFFSAAYTLYL 399
Cdd:PRK08375 361 LGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLYFLRI 424
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
108-366 |
2.22e-16 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 81.30 E-value: 2.22e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 108 LFMFYLFFESSLIPTFFLILGWGYQpERMQAGIYLLFYTLFASLPLLISIFNFYFTLNTLNI-YMCFFLLNLDFG--FYV 184
Cdd:PRK07363 129 LLLFFLFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFdYDAISTQNLSLNtqLIL 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 185 YISMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRV-FSLIFKLGSTFNIMIVGVSLLGGLLVSL 263
Cdd:PRK07363 208 LTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFgLQLFPQTWSLVAPGLAIIGTISVIYGAL 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 264 ICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKGLMNLMPS 343
Cdd:PRK07363 288 SAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRG 367
|
250 260
....*....|....*....|...
gi 827046112 344 MGLWWFLLCSANMAAPPTLNLLG 366
Cdd:PRK07363 368 LPLTSALLVLAGMASAGIPGLVG 390
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
106-438 |
5.05e-13 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 70.34 E-value: 5.05e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 106 SSLFMFYLFFESSLIPTFFLILGWGYQPERMQAGIYLLFYTLFASLPLLISIfnFYFTLNTLNIYMCFFLLNLDFGFYVY 185
Cdd:MTH00062 91 NNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCL--LYLSLVNGSFNFSDWGSDDSVSLIVY 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 186 ISMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFklgSTFNIMIVGVSLLGGLLVSLIC 265
Cdd:MTH00062 169 YVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIF---SGSFLGYLFLCCLFSVFFLITA 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 266 LRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKGLMNLMPSMg 345
Cdd:MTH00062 246 CSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVL- 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 346 LWWFLLCSANMAA-PPTLNLLGEISLLnGIISWSWISLFVVCLLSFFSAAYTLYLYSfsqHGKIFSCVYSLNSGYLREYL 424
Cdd:MTH00062 325 RVIVVFSFLSLCSfPPTIQFFCEVFLV-SSSFGVLVYLLFWCFYLFFGGLVPLILLG---HLLIRSESYESINVSNYSYL 400
|
330
....*....|....
gi 827046112 425 LLFLHWIPLNLFIV 438
Cdd:MTH00062 401 FFLIFLVFWCYLGF 414
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
105-396 |
3.79e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 67.84 E-value: 3.79e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 105 TSSLFMFYLFFESSLIPTFFLILGWGYQPERMQAGIYLLFYTLFASLpLLISIFNFYFTLNTLNIY-MCFFLLNLDFGFY 183
Cdd:PRK12662 129 SNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATF-YLIGIGFLYAITGTLNMGdMFLIIQDLPTNRA 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 184 VYISMVLAFL---VKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFK-----LGSTFNIMIVGVSL 255
Cdd:PRK12662 208 IQIGVLFIMVglfIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKanfvfTTLPFNNVFMILAA 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 256 LGGLLVSLICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINK 335
Cdd:PRK12662 288 LAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCL 367
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 827046112 336 GLMNLMPSMGLWWFLLCSANMAAPPTLNLLGEISLLNGII-SWSWISLFVVCLLSFFSAAYT 396
Cdd:PRK12662 368 NLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIkSNAWIGLVVLLVGSGLSVIYV 429
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-389 |
1.24e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 63.45 E-value: 1.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 54 DVLSYGFILLSFWICCLMFLSSGSVYNHYNFFLFLFSLVLLLLFFLVLTFSTSSLFMFYLFFESSLIPTFFLILGWGYQP 133
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 134 ERMQAGIYLLFYTLFASLPLLISIFNFYFTLNTLNI--------YMCFFLLNLDFGFYVYIS------MVLAFLVKMPMF 199
Cdd:PRK12667 161 DAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMadlsakirGLSFPLTGGLAGNPPLALgvalalALWAFTIKAAIF 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 200 IFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFKLGS-------TFNIMIVGVSLLGGLLVSLICLRQVDLK 272
Cdd:PRK12667 241 PNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPslidfraALSPILIILGAVSAIIGALMMVVQKDVK 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 273 SLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKGLMNLMPSMGLWWFLLC 352
Cdd:PRK12667 321 RLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGA 400
|
330 340 350
....*....|....*....|....*....|....*..
gi 827046112 353 SANMAAPPTLNLLGEISLLNGIISWSWISLFVVCLLS 389
Cdd:PRK12667 401 LSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIA 437
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
105-399 |
1.46e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 63.19 E-value: 1.46e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 105 TSSLFMFYLFFESSLIPTFFLILGWGYQPERMQAGIYLLFYTLFASLPLLISIFNFYFTLNTLNIYMCFFLLNLDFGFYV 184
Cdd:PRK08376 140 TGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVA 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 185 YISMVL---AFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLifkLGSTFNI-----MIVGVSLL 256
Cdd:PRK08376 220 KIALALfiaGLAMKSGAVPVHMWLPDAYPAAPSSISAMLLVIKQAGLYALARVLFSI---YGPAINLatvgwVIIILGCL 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 257 GGLLVSLICLRQVDLKSLIAYSSVAHMGIVLGGL---------CTMTYWG---LSGSYSLMIAHGLCSSGMFCLANISYE 324
Cdd:PRK08376 297 TMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLgvglaalgdPAMASYGeiaLAGGIYHIVNHALYKALLFLTAGAVIY 376
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 325 RVGSRSLLINKGLMNLMPSMgLWWFLLCSANMAAPPTLN------LLGEIS-LLNGIISWSWISLFVVCLLSFFSAAYTL 397
Cdd:PRK08376 377 ETGTRNLNELGGLARTMPKT-TIAFLIGAAAIVGLPPFNgfaskwLIYESSaLFNPILGVIAMIGSVLTLASFVKVFHTA 455
|
..
gi 827046112 398 YL 399
Cdd:PRK08376 456 FF 457
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
188-399 |
9.06e-09 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 57.46 E-value: 9.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 188 MVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFK--LGSTFNIMIVGVSLLGGLLVSLIC 265
Cdd:PRK08676 212 IFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQsgAAEQFSNVLIGLGIFSIAVAAFSM 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 266 LRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKGLMNLMPSMG 345
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAA 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 827046112 346 LWWFLLCSANMAAPPTLNLLGEISLLNGIISWS-WISLFVVCLLSFFSAAYTLYL 399
Cdd:PRK08676 372 WGVILGSAAIIGMPPFPLFLSKFFILLQLGGISvWLVLAVLLLLLLAASSFAIFL 426
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-385 |
1.02e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 57.29 E-value: 1.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 108 LFMFYLFFESSLIPTFFLiLGWGYQPERMQAGIYLLFYTLFASLPLLISIFNFYFTLNTLNI-YMCFFLLNLDFGFYVYI 186
Cdd:PRK12665 133 LFNLYVGFEILLVASYVL-LTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMaDLAVRLDELPSGTRTAL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 187 SMVL--AFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFKlGSTFNIMIVGVSLLGGLLVSLI 264
Cdd:PRK12665 212 FAVLlvAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLLMVVALLTMVVGILG 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 265 CLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKGLMNLMPSM 344
Cdd:PRK12665 291 AIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLL 370
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 827046112 345 GLwWFLLCSANMAA-PPTLNLLGEISLLN-GIISWSWISLFVV 385
Cdd:PRK12665 371 AV-LFFVPALNLGGiPPFSGFIGKVALLEaGAEDGTWLAWALV 412
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
109-392 |
3.57e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 55.89 E-value: 3.57e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 109 FMFYLFFESSLIPTFFLILGWGYQPERMQAGIYLLFYTLFASLPLLISIFNFYFtlntLNIYMCFFLLNLDFGF--YVYI 186
Cdd:PRK08667 134 FSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFI----QTGSFELSPLGASAGIlsLVFL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 187 SMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFKLGSTFNIMIVGVSLLGGLLVSLICL 266
Cdd:PRK08667 210 LLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYAL 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 267 RQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLM-----------IAHGLCSSGMFCLANISYERVGSRSLLINK 335
Cdd:PRK08667 290 KEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMG 369
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 827046112 336 GLMNLMPSMGLWWFLLCSANMAAPPTLNLLGEISLLNGII-----SWSWISLFVVCLLSFFS 392
Cdd:PRK08667 370 GLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFqsfsvADPLIKILLFSVLAIFA 431
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-363 |
5.97e-08 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 55.15 E-value: 5.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 110 MFYLFFESSLIPTFFLILGWGYQPERMQAGIYLLFYTLFASLPLLISIFNFYFTLNTLNIYMCFFLLNLDFGFYVYISMV 189
Cdd:PRK12646 134 LMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPMI 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 190 LAFLV----KMPMFIFHLWLPKAhVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFKLGSTFNIMIVGVSLLGGLLVSLIC 265
Cdd:PRK12646 214 FMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITA 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 266 LRQVDLKSLIAYSSVAHMGIVL------GGLCTMTYWGLSGSYSL--------MIAHGLCSSGMFCLANISYERVGSRSL 331
Cdd:PRK12646 293 LKQWDLKGILAYSTISQLGMIMamvgigGGYAQHQQDAIASIYVFvlfaalfhLMNHAIFKCALFMGVGIIDHEAGTRDI 372
|
250 260 270
....*....|....*....|....*....|..
gi 827046112 332 LINKGLMNLMPSMGLwWFLLCSANMAAPPTLN 363
Cdd:PRK12646 373 RILSGMRQLFPKMNL-VMTIAALSMAGVPFLN 403
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
175-393 |
1.37e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 53.78 E-value: 1.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 175 LLNLDFGFyvyisMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFK-LGSTF--NIMIV 251
Cdd:PRK06458 212 LMKLAFVF-----LLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAaIGSDFpgRLLLI 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 252 GVSLLGGLLVSLIcLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSL 331
Cdd:PRK06458 287 FGLLSVLVAAFFL-LRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDI 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 827046112 332 LINKGLMNLMPSMGlWWFLLCSANMA-APPTLNLLGEISLLNGIISWSWISLFVVCLLSFFSA 393
Cdd:PRK06458 366 NVIRGLLKVSPLTG-WGLMLGALAIAgMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLA 427
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
105-413 |
6.73e-07 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 51.49 E-value: 6.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 105 TSSLFMFYLFFESSLIPTFFLILgWGYQPERMQAGIYLLFYTLFASLPLLISIFNFYFTLNTLNiyMCFFLLNLD----F 180
Cdd:PRK12663 127 TGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLN--MAHIAMRLNdmgdT 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 181 GFYVYISMV--LAFLVKMPMFIFHlWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIF----KLGSTfniMIVGVS 254
Cdd:PRK12663 204 ATLTTIALLflLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFpqerELLHP---LLATMA 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 255 LLGGLLVSLICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLIN 334
Cdd:PRK12663 280 AITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYL 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 335 KGLMNLMPSMGLWWFLLCSANMAAPPTLNLLGEISLLNGII-SWSWISLFVVCLLSFFSaaytlyLYSFsqhGKIFSCVY 413
Cdd:PRK12663 360 GGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALdNGAYILLALMLITSLIT------MYSL---FRIFFLAY 430
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-83 |
8.84e-07 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 47.52 E-value: 8.84e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 1 MLKFIFFIVFMTPLCFFINYWYILSFLFLGSFI------YLVFGYLNFFVCNIDYYFCSDVLSYGFILLSFWICCLMFLS 74
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLlallslLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
....*....
gi 827046112 75 SGSVYNHYN 83
Cdd:pfam01059 81 SQKHLKSEP 89
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
189-371 |
1.29e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 50.81 E-value: 1.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 189 VLAFLVKMPMFI------FHLWLPKAHVEA-PV-----AGSMILAGVLLKLggygllrVFSLIFKLGSTFNIMIVGVSLL 256
Cdd:PRK12650 209 VVAVLIAVAAFTksaqfpFHFWLPEAMAAItPVsaflhAAAVVKAGIYLLL-------RFSPVFHDVAVWNWLLIIVGMI 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 257 GGLLVSLICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKG 336
Cdd:PRK12650 282 TALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGS 361
|
170 180 190
....*....|....*....|....*....|....*.
gi 827046112 337 LMNLMPsMGLWWFLLCSANMAA-PPTLNLLGEISLL 371
Cdd:PRK12650 362 LWRRMP-FTFVSVTIAALSMAAvPPLFGFVSKEGML 396
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
108-316 |
2.92e-06 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 49.61 E-value: 2.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 108 LFMFYLFFESSLIPTFFLILgWGYQPERMQAGIYLLFYTLFASLpLLISIFNFYFTLNTLNIY-MCFFLLN---LDFGFY 183
Cdd:PRK08668 120 LLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVLSAIGAYA-MLYAIFLIYAKTGTFDFAdISQGLINdtsTGFALI 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 184 VYISMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILA---------GVLLKLGGYGLLRVFS--LIFKLGSTFNIMIVG 252
Cdd:PRK08668 198 VFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSgqlsklgayGFLLVLYVLPGTKLFSefGTYRGVPLFNYILAW 277
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 827046112 253 VSLLGGLLVSLICLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMF 316
Cdd:PRK08668 278 LGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
187-346 |
6.40e-06 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 48.22 E-value: 6.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 187 SMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFKLGSTFNI--MIVGVSLLGGLLVSLI 264
Cdd:PRK08377 211 LLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVlkLVIIMATLTVFFAELS 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 265 CLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKGLMNLMPSM 344
Cdd:PRK08377 291 ALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLT 370
|
..
gi 827046112 345 GL 346
Cdd:PRK08377 371 AL 372
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
105-362 |
3.91e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 45.71 E-value: 3.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 105 TSSLFMFYLFFESSLIPTFFLILGWGYQPERMQAGIYLLFyTLFASLPLLISIFNFYFTLNTLNI-YMCFFLLNLDFG-- 181
Cdd:PRK07691 127 TGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLNMaDISVKIAELSAGqt 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 182 ---FYVYISMVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFKLGSTFNIMIVGVSLLGG 258
Cdd:PRK07691 206 gliTVVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILILALLT 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 259 LLVSLI-CLRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMFCLANISYERVGSRSLLINKGL 337
Cdd:PRK07691 286 IIFGVIgAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGL 365
|
250 260
....*....|....*....|....*
gi 827046112 338 MNLMPSMGlWWFLLCSANMAAPPTL 362
Cdd:PRK07691 366 IKRYPVLG-WMFFIAALSLAGIPPL 389
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-399 |
7.69e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 44.94 E-value: 7.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 108 LFMFYLFFESSLIPTFFLIlGWGYQPERMQAGIYLLFYTLFASLPLLISIFNFYFTLNTLNIYMcffLLNLDFGFYVYIs 187
Cdd:PRK07234 116 LISLYVALEVLSIATFLLV-AYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSG---LATADPEAFALI- 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 188 mVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFKLGstfnIMIVGVSLLGGLLVSLICLR 267
Cdd:PRK07234 191 -ALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLD----LIVRIFGVGTALLGVLFALL 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 268 QVDLKSLIAYSSVAHMGIVLGGLCTmtywglSGSYSLmiAHGLCSSGMFCLANISYERVgsrslliNKGLMNLMPSMGLW 347
Cdd:PRK07234 266 EKDLKRMLAFSTISQLGFILAAPLV------GGLYAL--AHGLVKSTLFLCAGALPSRN-------FTELISQMLGIGKW 330
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 827046112 348 WFLL--CSANMAAPPTLNLLGEISLLNGIISWSWISLFVVCLLSFFSAAYTLYL 399
Cdd:PRK07234 331 IPLTmaSFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNLAAVGTAASFWKFIFL 384
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
266-398 |
1.07e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 41.45 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 266 LRQVDLKSLIAYSSVAHMG--IVLGGLCT--MTYWGLsgsySLMIAHGLCSSGMFCLANISYERVGSRSLLINKGLMNLM 341
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGflTVLVGIGTrdAALAGL----AMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQ 361
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 827046112 342 PSMgLWWFLLCSANMAA-PPTLNLLGEISLLNGII------SWSWISLFVVCLLSFFSAAYTLY 398
Cdd:PRK12644 362 PVL-AVVAALAAASMAGlPPLLGFVAKEAALEAVLhdgalgPAGPVVLAGIVLGSILTVAYSLR 424
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
136-316 |
2.22e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 40.23 E-value: 2.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 136 MQAGIYL----LFYTLFASLPLLISIFNFyfTLNTLNIymcffllNLDFGFYVYISMVLAFLVKMPMFIFHLWLPKAHVE 211
Cdd:MTH00198 258 MSSGFYLfgcaLYFGFTGNEGMLGTILSA--TLETTNI-------ELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEG 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 212 APVAGSMILAGVLLKLggygllrVFSLIFKLGSTFNIMIVGVSLLGGLLVSLiCLRQVDLKSLIAYSSVAHMGIVLGGLC 291
Cdd:MTH00198 329 APTPTTALIAIIPKFT-------VYILLTSLVITSKLLLSVAIISLVVGAFG-ALNQTRIKRLLAYSGIGHIGFILIGVS 400
|
170 180
....*....|....*....|....*
gi 827046112 292 TMTYWGLSGSYSLMIAHGLCSSGMF 316
Cdd:MTH00198 401 AGTYESLQASWTYAVTYLVSALASF 425
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
106-388 |
2.35e-03 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 40.34 E-value: 2.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 106 SSLFMFYLFFESSLIPTFFLIlGWGYQPERMQAGIYLLFYTLFASLPLLISIFNFYFTLNTLNIYmCFFLLNLDFGFYVY 185
Cdd:PRK06525 133 STLLGLLLFFEITGLCSWALI-SYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALS-ALSGLHGSLKYLVF 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 186 ISMVLAFLVKMPMFIFHLWLPKAhVEAPVAGSMIL-AGVLLKLGGYGLLRVFSLIFKLGSTFNIMIVGVSLLGGLLVSLI 264
Cdd:PRK06525 211 LGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLM 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 265 CLRQVDLKSLIAYSSVAHMGIVLGGLCTMTY---WGLSGSYSLMIAHGLCSSGMFCLAN-ISYErVGSRSLLINKGLMNL 340
Cdd:PRK06525 290 YLPQQDMKRLLAYSTITQLGYMFFGLSLAILgsrLALEGSIAYIFNHAFAKSLFFLVAGaLSYS-CGTRLLPRLRGVLKK 368
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 827046112 341 MPSMGLWWFLLCSANMAAPPTLNLLGEISLLNG-----IISWSWISLFVVCLL 388
Cdd:PRK06525 369 LPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAgfelsVEYWILLPAMVLLLI 421
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
188-316 |
2.58e-03 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 40.19 E-value: 2.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 188 MVLAFLVKMPMFIFHLWLPKAHVEAPVAGSMILAGVLLKLGGYGLLRVFSLIFK-LGSTFNIMIVGVSLLGGLLVSLICL 266
Cdd:PRK05777 210 LLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLVVAFGgLSEDWQQVLAIIAIASMLVGNLAAL 289
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 827046112 267 RQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMF 316
Cdd:PRK05777 290 SQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
266-331 |
2.67e-03 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 40.10 E-value: 2.67e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 827046112 266 LRQVDLKSLIAYSSVAHMGIVLGGLCTMTYWGLSGSYSLMIAHGLCSSGMF-CLANISYERVGSRSL 331
Cdd:COG1007 288 LAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEI 354
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| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
107-400 |
8.57e-03 |
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Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 38.59 E-value: 8.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 107 SLFMFYLFFESSLIPTFFLILGWGYQPERMQAGIYLLFYTLFASLPLLISIFNFYFTLNTLNIYMCFFLLNLDFGFYVYI 186
Cdd:COG1009 132 NLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILSSPLLT 211
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90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 187 SMVLAFLV----KMPMFIFHLWLPKAhVEAP-------------VAGSMILAgvllklggygllrVFSLIFKLGSTFNIM 249
Cdd:COG1009 212 LILLLLLLgafgKSAQFPLHFWLPDA-MEGPtpvsallhaatmvKAGVYLLA-------------RLSPLFALSPVWLTV 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 827046112 250 IVGVSLLGGLLVSLICLRQVDLKSLIAYSSVAHMGIVLGGLctmtywGLsGSYS----LMIAHGLCSSGMFCLANISYER 325
Cdd:COG1009 278 VAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLAL------GV-GAYVaalfHLLTHAFFKALLFLGAGSVIHA 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 827046112 326 VGSRSLLINKGLMNLMPSMGlWWFLLCSANMAA-PPTLNLLGEISLLNGII---SWSWISLFVVCLLSFFSAAYTLYLY 400
Cdd:COG1009 351 TGTRDIRKMGGLRKKMPITA-ITFLIGALSLAGiPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLF 428
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