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Conserved domains on  [gi|937408789|ref|YP_009166989|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Choloepus hoffmanni]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009566)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177166  Cd Length: 318  Bit Score: 551.92  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789   1 MLTTNILCLIIPILLAVAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALT 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  81 LALTLWIPLPMPYPLINLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 161 TLSTLTTTQEHTWLILPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTA 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 937408789 241 LFFGSFHSPSFPELHTINFITKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVSTPISLASIPPQT 318
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 551.92  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789   1 MLTTNILCLIIPILLAVAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALT 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  81 LALTLWIPLPMPYPLINLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 161 TLSTLTTTQEHTWLILPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTA 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 937408789 241 LFFGSFHSPSFPELHTINFITKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVSTPISLASIPPQT 318
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
NADHdh pfam00146
NADH dehydrogenase;
16-303 4.35e-117

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 339.45  E-value: 4.35e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789   16 AVAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALTLALTLWIPLPMPYPL 95
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789   96 I--NLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSFTLSTLTTTQEHTW 173
Cdd:pfam00146  92 VlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGW 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  174 LILPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTALFFGSFHSPsFPE 253
Cdd:pfam00146 172 FIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGP-FPL 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 937408789  254 LHTINFITKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMW 303
Cdd:pfam00146 251 PGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-303 1.11e-105

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 311.68  E-value: 1.11e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  16 AVAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALTLALTLWIPLPM--PY 93
Cdd:COG1005   25 LAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFgpGL 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  94 PLINLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSFTLSTLTTTQEHT- 172
Cdd:COG1005  105 VLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAGGl 184

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 173 WLILPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTALFFGSFHSPSFP 252
Cdd:COG1005  185 WFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFPI 264

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 937408789 253 ELHT-----INFITKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMW 303
Cdd:COG1005  265 LPLGglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 551.92  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789   1 MLTTNILCLIIPILLAVAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALT 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  81 LALTLWIPLPMPYPLINLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 161 TLSTLTTTQEHTWLILPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTA 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 937408789 241 LFFGSFHSPSFPELHTINFITKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVSTPISLASIPPQT 318
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 16-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 522.15  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  16 AVAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALTLALTLWIPLPMPYPL 95
Cdd:MTH00111  21 AVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMPFPL 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  96 INLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSFTLSTLTTTQEHTWLI 175
Cdd:MTH00111 101 ADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEPLWLI 180

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 176 LPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTALFFGSFHSPSFPELH 255
Cdd:MTH00111 181 FSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNPSTLNLPPELF 260

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 937408789 256 TINFITKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVSTPISLASIPPQT 318
Cdd:MTH00111 261 TINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQL 323
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 16-317 5.03e-178

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 494.91  E-value: 5.03e-178
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  16 AVAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALTLALTLWIPLPMPYPL 95
Cdd:MTH00071  21 AVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMPNNL 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  96 INLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSFTLSTLTTTQEHTWLI 175
Cdd:MTH00071 101 SNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEFMWLI 180

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 176 LPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTALFFGSFHSPSFPELH 255
Cdd:MTH00071 181 IPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYNHLQPELS 260

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 937408789 256 TINFITKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVSTPISLASIPPQ 317
Cdd:MTH00071 261 TMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPPM 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 16-318 3.75e-177

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 492.58  E-value: 3.75e-177
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  16 AVAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALTLALTLWIPLPMPYPL 95
Cdd:MTH00134  22 AVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMPYPV 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  96 INLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSFTLSTLTTTQEHTWLI 175
Cdd:MTH00134 102 TDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQESIWLL 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 176 LPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTALFFGSFHSPSFPELH 255
Cdd:MTH00134 182 LPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIPTLPELT 261

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 937408789 256 TINFITKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVSTPISLASIPPQT 318
Cdd:MTH00134 262 TINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPPQL 324
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 16-316 8.20e-143

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 405.06  E-value: 8.20e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  16 AVAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALTLALTLWIPLPMPYPL 95
Cdd:MTH00218  18 AVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPLPFSL 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  96 INLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSFTLSTLTTTQEHTWLI 175
Cdd:MTH00218  98 INLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQETIWLL 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 176 LPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTALFFGSFHSpsfpelh 255
Cdd:MTH00218 178 IPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLT------- 250

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 937408789 256 TINFITKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVSTPISLASIPP 316
Cdd:MTH00218 251 TINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 16-316 5.19e-136

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 388.56  E-value: 5.19e-136
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  16 AVAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALTLALTLWIPLPMPYPL 95
Cdd:MTH00040  20 AVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVPTPT 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  96 INLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSFTLSTLTTTQEHTWLI 175
Cdd:MTH00040 100 LNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNGSWLL 179

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 176 LPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTALFFG--SFHSPSFPe 253
Cdd:MTH00040 180 FPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGggSPFNEIFP- 258

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 937408789 254 LHTINFITKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVSTPISLASIPP 316
Cdd:MTH00040 259 INIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
NADHdh pfam00146
NADH dehydrogenase;
16-303 4.35e-117

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 339.45  E-value: 4.35e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789   16 AVAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALTLALTLWIPLPMPYPL 95
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789   96 I--NLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSFTLSTLTTTQEHTW 173
Cdd:pfam00146  92 VlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGW 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  174 LILPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTALFFGSFHSPsFPE 253
Cdd:pfam00146 172 FIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGP-FPL 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 937408789  254 LHTINFITKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMW 303
Cdd:pfam00146 251 PGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 16-302 1.59e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 333.38  E-value: 1.59e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  16 AVAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALTLALTLWIPLPMPYPL 95
Cdd:MTH00143  17 AVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSYFSS 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  96 INLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSFTLSTLTTTQEHTWLI 175
Cdd:MTH00143  97 SYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSVWLG 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 176 LPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTALFFGSfhSPSFPELH 255
Cdd:MTH00143 177 FLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGG--SSVLFLLG 254

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 937408789 256 TINFITKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCM 302
Cdd:MTH00143 255 GVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILV 301
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 16-313 2.57e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 330.17  E-value: 2.57e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  16 AVAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALTLALTLWIPLPMPYPL 95
Cdd:MTH00195  18 AVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSPFGF 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  96 INLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSFTLSTLTTTQEHTWLI 175
Cdd:MTH00195  98 SSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFSWVI 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 176 LPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTALFFGSFhspsfpelH 255
Cdd:MTH00195 178 LLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGGG--------G 249

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 937408789 256 TINFITKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVSTPISLAS 313
Cdd:MTH00195 250 TIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 16-302 1.00e-111

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 325.96  E-value: 1.00e-111
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  16 AVAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALTLALTLWIPLPMPYPL 95
Cdd:MTH00193  18 SVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYLFNL 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  96 INLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSFTLSTLTTTQEHTWLI 175
Cdd:MTH00193  98 ISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYIWFI 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 176 LPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTALFFGSfhspsfpELH 255
Cdd:MTH00193 178 FFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGG-------DLL 250

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 937408789 256 TINFITKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCM 302
Cdd:MTH00193 251 SLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLL 297
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-303 1.11e-105

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 311.68  E-value: 1.11e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  16 AVAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALTLALTLWIPLPM--PY 93
Cdd:COG1005   25 LAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFgpGL 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  94 PLINLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSFTLSTLTTTQEHT- 172
Cdd:COG1005  105 VLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAGGl 184

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 173 WLILPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTALFFGSFHSPSFP 252
Cdd:COG1005  185 WFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFPI 264

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 937408789 253 ELHT-----INFITKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMW 303
Cdd:COG1005  265 LPLGglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 16-299 8.58e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 305.81  E-value: 8.58e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  16 AVAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALTLALTLWIPLPMPYPL 95
Cdd:MTH00225  17 SVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLYPSMFSI 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  96 INLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSFTLSTLTTTQEHTWLI 175
Cdd:MTH00225  97 YSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQKYFWFM 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 176 LPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTALFFGSFHSPSFpelh 255
Cdd:MTH00225 177 FVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGGFFVTID---- 252

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 937408789 256 tINFITKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:MTH00225 253 -LFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLA 295
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 16-316 2.67e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 302.80  E-value: 2.67e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  16 AVAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALTLALTLW--IPLPMPY 93
Cdd:MTH00054  18 SIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWgvIPYGEGV 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  94 PLINLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSFTLSTLTTTQEHTW 173
Cdd:MTH00054  98 VLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQKNIW 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 174 LILPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTALFFGSFHSPSFPE 253
Cdd:MTH00054 178 FIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLVISGPT 257

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 937408789 254 LHTINFI---TKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVSTPISLASIPP 316
Cdd:MTH00054 258 SYFSNFVwfgIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPP 323
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
17-303 9.81e-102

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 301.34  E-value: 9.81e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  17 VAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALTLALTLWIPLPM--PYP 94
Cdd:PRK06076  27 VAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFgpELV 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  95 LINLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSFTLSTLTTTQEHTWL 174
Cdd:PRK06076 107 IADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQFLSWN 186

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 175 ILPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTALFFGSFHSPSFPEL 254
Cdd:PRK06076 187 IIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGGWLPPFPLGG 266

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 937408789 255 HT---INFITKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMW 303
Cdd:PRK06076 267 GIpgaIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 16-316 3.38e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 297.80  E-value: 3.38e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  16 AVAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALTLALTLW--IPLPMPY 93
Cdd:MTH00216  22 AVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWgvIPYERGV 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  94 PLINLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSFTLSTLTTTQEH-T 172
Cdd:MTH00216 102 LISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITEIVLAQNNgI 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 173 WLILPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTALFFGSFHSP-SF 251
Cdd:MTH00216 182 WFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFLGGWLSPiKY 261

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 937408789 252 PELHTINFITKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVSTPISLASIPP 316
Cdd:MTH00216 262 FKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFNGPPP 326
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 16-316 4.19e-87

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 264.96  E-value: 4.19e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  16 AVAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALTLALTLWIPLPMPYP- 94
Cdd:MTH00029  23 SVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIVTMDQGv 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  95 -LINLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSFTLSTLTTTQEHTW 173
Cdd:MTH00029 103 fLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQRSVW 182

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 174 LILPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTALFFGSFHSP---- 249
Cdd:MTH00029 183 LIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGGWLSPldgi 262

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 937408789 250 ------------SFPELHTINFITKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVSTPISLASIPP 316
Cdd:MTH00029 263 ptppeafsifeqIASSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGILIGFNGVPP 341
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 16-302 4.71e-87

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 263.56  E-value: 4.71e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  16 AVAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALTLALTLWIPLPMPYPL 95
Cdd:MTH00010  19 AMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKHPS 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  96 INLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSFTLSTLTTTQeHTWLI 175
Cdd:MTH00010  99 FFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQ-YSWIL 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 176 LPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMnSLTTALFFGSFHSPSFpeLH 255
Cdd:MTH00010 178 LMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIM-SLFTSVFFTSFIPSIF--IS 254

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 937408789 256 TINFITKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCM 302
Cdd:MTH00010 255 DLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLM 301
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 16-302 1.69e-64

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 204.75  E-value: 1.69e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  16 AVAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALTLALTLWIPLPMPYPL 95
Cdd:MTH00090  12 AIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYFFDF 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  96 INLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGsftlsTLTTTQEHTWLI 175
Cdd:MTH00090  92 LSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNN-----SFSFVSSFSLSL 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 176 LPTWplaMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTALFFGsfhspsfpelh 255
Cdd:MTH00090 167 FVIY---LPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK----------- 232

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 937408789 256 tINFITKTLVLtSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCM 302
Cdd:MTH00090 233 -FSFLMLFLIF-SLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLG 277
ndhA CHL00032
NADH dehydrogenase subunit 1
 24-298 1.39e-48

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 166.28  E-value: 1.39e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  24 ERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALTLALTLWIPLPMPYPLI--NLNLG 101
Cdd:CHL00032  51 EREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPFGYHLVlaDLSIG 130

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 102 ILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSFTLSTLTTTQEH----TWLIlp 177
Cdd:CHL00032 131 VFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKygfwGWNL-- 208

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 178 tW--PLA-MMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTALFFGSFHSP----S 250
Cdd:CHL00032 209 -WrqPIGfIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSipyiF 287

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 937408789 251 FPELHTINF----------ITKTLVLTSMFLWI----RASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:CHL00032 288 IPELFEINKtggvfgttigIFITLAKTYLFLFIsittRWTLPRLRMDQLLNLGWKFLLPISL 349
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 17-298 1.10e-47

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 161.63  E-value: 1.10e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  17 VAFLTLVERKILGYMQLRKGPNITGPYGLLQPIADAMKLFTKEPLRPLTSSKLMFTIAPTLALTLALTLWIPLPMPYPLI 96
Cdd:MTH00058  18 VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSYYSGS 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  97 NLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSFTLSTLTTTQEHTWLIL 176
Cdd:MTH00058  98 YSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSGWLSVLLF 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 177 PtwPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTALFFGSFHSPSFPELHT 256
Cdd:MTH00058 178 P--LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGGFVSIMLLFHL 255

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 937408789 257 InfitktlvltsMFLWIRASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:MTH00058 256 L-----------FFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
19-303 3.21e-28

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 110.66  E-value: 3.21e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  19 FLTLVERKILGYMQLRKGPnitgpyGLLQPIADAMKLFTKEPLRPLTSSKLM-FTIAPTLALTLALTLWIPLPMPYPLIN 97
Cdd:COG0650   20 LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWLFrAAPYVALAAMLLAALLVPVLTTGPPLS 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789  98 LNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLMNGSFTLSTLTTTQEHT---WL 174
Cdd:COG0650   94 FSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAAHgplLL 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937408789 175 ILPTWPLAMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNSLTTALFFGsFHSPSFPEL 254
Cdd:COG0650  174 SPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLFLP-WGIALTLLL 252

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 937408789 255 HTINFITKTLVLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMW 303
Cdd:COG0650  253 ALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLA 301
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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