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Conserved domains on  [gi|1150149556|ref|YP_009348532|]
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ATPase subunit 6 (mitochondrion) [Enteromius pobeguini]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009577)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 1-227 2.60e-135

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 177190  Cd Length: 227  Bit Score: 378.83  E-value: 2.60e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556   1 MMASFFDQFASPSYLGVPLIAIAITLPWILYPTPSPQWINSRITTIQGWLINRFTNQLMMPLNVKGHKWALLLASLMMFL 80
Cdd:MTH00132    1 MTLSFFDQFMSPTYLGIPLIALALTLPWILFPTPTSRWLNNRLLTLQGWFINRFTQQLLLPLNVGGHKWALLLTSLMLFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  81 VTINMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVR 160
Cdd:MTH00132   81 ITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVR 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1150149556 161 LTANLTAGHLLIQLIATAVFVLMPMMPTVAILTATVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
Cdd:MTH00132  161 LTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
 
Name Accession Description Interval E-value
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 1-227 2.60e-135

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 378.83  E-value: 2.60e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556   1 MMASFFDQFASPSYLGVPLIAIAITLPWILYPTPSPQWINSRITTIQGWLINRFTNQLMMPLNVKGHKWALLLASLMMFL 80
Cdd:MTH00132    1 MTLSFFDQFMSPTYLGIPLIALALTLPWILFPTPTSRWLNNRLLTLQGWFINRFTQQLLLPLNVGGHKWALLLTSLMLFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  81 VTINMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVR 160
Cdd:MTH00132   81 ITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVR 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1150149556 161 LTANLTAGHLLIQLIATAVFVLMPMMPTVAILTATVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
Cdd:MTH00132  161 LTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 19-227 2.77e-48

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 158.14  E-value: 2.77e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  19 LIAIAITLPWILYPTPSPQWINSRITTIQGWLINRFTNQLMMPLNVKGHKWALLLASLMMFLVTINMLGLLPYTFTPTTQ 98
Cdd:TIGR01131  20 LILLLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGLIPYSFTPTSH 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  99 LSLNMGLAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATA 178
Cdd:TIGR01131 100 LSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGHLLLTLLSGL 179

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1150149556 179 VFVLmpMMPTVAILTATVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
Cdd:TIGR01131 180 LFSL--MSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 66-224 8.52e-38

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 129.06  E-value: 8.52e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  66 GHKWALLLASLMMFLVTINMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIII 145
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1150149556 146 ETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLMPMMPTVAILtatVLFLLTLLEVAVAMIQAYVFVLLLSLYLQ 224
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLL---LPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
19-224 3.02e-32

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 116.44  E-value: 3.02e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  19 LIAIAITLPWILYPTP-SPQWINSRITTIQGWLINRFTNQLMMPLNVK-GHKWALLLASLMMFLVTINMLGLL---PYTF 93
Cdd:pfam00119   5 LIVALILLLFLLLATRkTKKLVPGRLQNFVEMLVEFVDNIVKDNIGKKkGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  94 TPTTQLSLNMGLAVPLWLATVIIGMRNQPTIA-LGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLI 172
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHGLGGyFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1150149556 173 QLIATAVFVLMPMMPTVAILTATVLFLLTLLEVAVAMIQAYVFVLLLSLYLQ 224
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 49-225 1.07e-22

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 91.29  E-value: 1.07e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  49 WLINRFTNQLMMPLNVKGHKWALLLASLMMFLVTINMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTIA-LG 127
Cdd:COG0356    37 MLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKGLGGyLK 116

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556 128 HLLPEGTPIPLIPVLIIiETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLmpmmpTVAILTATVLFLLTLLEVAV 207
Cdd:COG0356   117 HLFFPPFPWLAPLMLPI-EIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFL-----LLGVLSLLLPVAWTAFELLV 190

                         170
                  ....*....|....*...
gi 1150149556 208 AMIQAYVFVLLLSLYLQE 225
Cdd:COG0356   191 GFLQAYIFTMLTAVYISL 208
 
Name Accession Description Interval E-value
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 1-227 2.60e-135

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 378.83  E-value: 2.60e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556   1 MMASFFDQFASPSYLGVPLIAIAITLPWILYPTPSPQWINSRITTIQGWLINRFTNQLMMPLNVKGHKWALLLASLMMFL 80
Cdd:MTH00132    1 MTLSFFDQFMSPTYLGIPLIALALTLPWILFPTPTSRWLNNRLLTLQGWFINRFTQQLLLPLNVGGHKWALLLTSLMLFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  81 VTINMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVR 160
Cdd:MTH00132   81 ITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVR 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1150149556 161 LTANLTAGHLLIQLIATAVFVLMPMMPTVAILTATVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
Cdd:MTH00132  161 LTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-227 8.60e-117

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 332.32  E-value: 8.60e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556   1 MMASFFDQFASPSYLGVPLIAIAITLPWILYPTPSPQWINSRITTIQGWLINRFTNQLMMPLNVKGHKWALLLASLMMFL 80
Cdd:MTH00073    1 MNLSFFDQFLSPTLLGIPLIMLAMLLPWLLFPTPTNKWLNNRLSTLQIWFLQNFTKQLMLPLNTPGHKWALILTSLMVFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  81 VTINMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVR 160
Cdd:MTH00073   81 ITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGVR 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1150149556 161 LTANLTAGHLLIQLIATAVFVLMPMMPTVAILTATVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
Cdd:MTH00073  161 LTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQENV 227
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-227 6.04e-105

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 302.13  E-value: 6.04e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556   1 MMASFFDQFASPSYLGVPLIAIAITLPWILYPTPSPQWINSRITTIQGWLINRFTNQLMMPLNVKGHKWALLLASLMMFL 80
Cdd:MTH00120    1 MNLNFFDQFSSPELLGIPLILLAMLIPALLIPSPKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLMLLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  81 VTINMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVR 160
Cdd:MTH00120   81 LLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1150149556 161 LTANLTAGHLLIQLIATAVFVLMPMMPTVAILTATVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
Cdd:MTH00120  161 LTANLTAGHLLIQLISTATLNLLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQENT 227
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-227 2.67e-92

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 270.28  E-value: 2.67e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556   1 MMASFFDQFASPSYLGVPLIAIAITLPWILYPTPSPQWINSRITTIQGWLINRFTNQLMMPLNVKGHKWALLLASLMMFL 80
Cdd:MTH00179    1 MMLSMFDQFESPSLLGIPLLALALLLPWLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  81 VTINMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVR 160
Cdd:MTH00179   81 LTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVR 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1150149556 161 LTANLTAGHLLIQLIATAVFVLMPMMPTVAILTATVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
Cdd:MTH00179  161 LTANITAGHLLMHLISSAVFVLMNFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENL 227
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 1-226 1.44e-77

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 232.92  E-value: 1.44e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556   1 MMASFFDQFASPSYLGVPLIAIAITLPWILYPTPSpQWINSRITTIQGWLINRFTNQLMMPLNVKGHKWALLLASLMMFL 80
Cdd:MTH00101    1 MNENLFASFITPTILGLPIVTLIIMFPSLLFPTPN-RLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  81 VTINMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVR 160
Cdd:MTH00101   80 GSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVR 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1150149556 161 LTANLTAGHLLIQLIATAVFVLMPMMPTVAILTATVLFLLTLLEVAVAMIQAYVFVLLLSLYLQEN 226
Cdd:MTH00101  160 LTANITAGHLLIHLIGGATLALMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDN 225
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-227 4.46e-49

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 160.14  E-value: 4.46e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556   3 ASFFDQFASPSYLGVPL--IAIAITLPWILYPTPSpQWINSRITTIQGWLINRFTNQLMMPLNVKGHKWALLLASLMMFL 80
Cdd:MTH00035    5 NSIFGQFSPDTILFIPLtlLSSVIALSWLFFINPT-NWLPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVFILI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  81 VTINMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVR 160
Cdd:MTH00035   84 LSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLR 163

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1150149556 161 LTANLTAGHLLIQLIATAVFVLMPmMPTVAILTATVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
Cdd:MTH00035  164 LAANLTAGHLLIFLLSTAIWELSN-SPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQNI 229
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 19-227 2.77e-48

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 158.14  E-value: 2.77e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  19 LIAIAITLPWILYPTPSPQWINSRITTIQGWLINRFTNQLMMPLNVKGHKWALLLASLMMFLVTINMLGLLPYTFTPTTQ 98
Cdd:TIGR01131  20 LILLLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGLIPYSFTPTSH 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  99 LSLNMGLAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATA 178
Cdd:TIGR01131 100 LSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGHLLLTLLSGL 179

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1150149556 179 VFVLmpMMPTVAILTATVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
Cdd:TIGR01131 180 LFSL--MSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 2.85e-42

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 142.61  E-value: 2.85e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556   1 MMASFFDQFASPSYLGVPLIAIAITLPWILYPtpSPQW-INSRITTIQGWLINRFTNQLMMPLNVKGHKWALLLASLMMF 79
Cdd:MTH00157    1 MMTNLFSIFDPSTSFNLSLNWLSTFLGLLFIP--SSFWlIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  80 LVTINMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGV 159
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1150149556 160 RLTANLTAGHLLIQLIATAVFVLMPMMPTVAILTatvLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILI---QILLLILESAVAIIQSYVFSVLSTLYSSE 221
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 66-224 8.52e-38

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 129.06  E-value: 8.52e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  66 GHKWALLLASLMMFLVTINMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIII 145
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1150149556 146 ETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLMPMMPTVAILtatVLFLLTLLEVAVAMIQAYVFVLLLSLYLQ 224
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLL---LPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-226 9.44e-38

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 131.31  E-value: 9.44e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556   1 MMASFFDQFASPSYLGVPLIAIAITLPWI-LYPTPSPQWI-NSRITTIQGWLINRFTNQLMMPLNVKGHKWALLLASLMM 78
Cdd:MTH00176    1 MLVDLFSSFDPPNKNIFSMISLSWITLLLfLLLMPSSVWFcPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  79 FLVTINMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALG 158
Cdd:MTH00176   81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1150149556 159 VRLTANLTAGHLLIQLIATAVFVLMPMMPTVAILTATVLFLLTLLEVAVAMIQAYVFVLLLSLYLQEN 226
Cdd:MTH00176  161 VRLAANLSAGHLLLGLLGAAMWGLLPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEH 228
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-225 1.45e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 120.36  E-value: 1.45e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556   1 MMASFFDQFASPSYLGVPLIAIAITLP-WILYPTPSPQWIN-SRITTIQGWLINRFTNQLMMPLNVKGHKWALLLASLMM 78
Cdd:MTH00173    1 MMVDLFSSFDDHNSSFSSLSFLMWLLSlMSLFFFSSSVWVSsSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  79 FLVTINMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALG 158
Cdd:MTH00173   81 FLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLT 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1150149556 159 VRLTANLTAGHLLIQLIATAV-FVLMPMMPTVAILTATVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
Cdd:MTH00173  161 VRLLANISAGHIVLTLIGNYLsSSLFSSSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP-synt_A pfam00119
ATP synthase A chain;
19-224 3.02e-32

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 116.44  E-value: 3.02e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  19 LIAIAITLPWILYPTP-SPQWINSRITTIQGWLINRFTNQLMMPLNVK-GHKWALLLASLMMFLVTINMLGLL---PYTF 93
Cdd:pfam00119   5 LIVALILLLFLLLATRkTKKLVPGRLQNFVEMLVEFVDNIVKDNIGKKkGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  94 TPTTQLSLNMGLAVPLWLATVIIGMRNQPTIA-LGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLI 172
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHGLGGyFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1150149556 173 QLIATAVFVLMPMMPTVAILTATVLFLLTLLEVAVAMIQAYVFVLLLSLYLQ 224
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 1-223 3.27e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 117.06  E-value: 3.27e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556   1 MMASFFDQFASPSYLGV--PLIAIAITLPWILYPTPSPQWINSRITTIQGWLINRFTNQLMMPLNVKGHKWALLLASLMM 78
Cdd:MTH00172    1 MSSSYFDQFNIVWLIGLtnSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFIISLFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  79 FLVTINMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALG 158
Cdd:MTH00172   81 FIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLG 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1150149556 159 VRLTANLTAGHLLIQLIATAVFVLMPMMPTVAILTATVLFLLTLLEVAVAMIQAYVFVLLLSLYL 223
Cdd:MTH00172  161 VRLAANLSAGHLLFAILAGFGFNMLCASGFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYL 225
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 18-222 5.32e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 103.27  E-value: 5.32e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  18 PLIAIAITLPWILYPTPSPQWINSRITTIQGWLINRFTNQLMMPLNVKGHKWALLLASLMMFLVTINMLGLLPYTFTPTT 97
Cdd:MTH00005   22 STAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALFTMIILMNLSGLLPYVFSTSS 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  98 QLSLNMGLAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIAT 177
Cdd:MTH00005  102 HLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFRLAANMSAGHIVLSLIGI 181

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1150149556 178 AVFVLMPMMPTVAILTATVLFLLTLLEVAVAMIQAYVFVLLLSLY 222
Cdd:MTH00005  182 YAASALFSSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLY 226
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 1-227 1.04e-25

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 100.08  E-value: 1.04e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556   1 MMASFFDQFASPSYLGVP---------------LIAIAITLPWILYPtpSPQWINSRITTIQGWLINRFTNQLMMPLNVK 65
Cdd:MTH00175    1 MLAAYFDQFNIIRLITIQaflgdwlvtftnssmMMVLAVIIFWLLLK--GDKLIPNRWQSIMELIYLNIRSVVHDNLGKS 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  66 GHKWALLLASLMMFLVTINMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIII 145
Cdd:MTH00175   79 GQKYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLI 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556 146 ETISLFIRPLALGVRLTANLTAGHLLIQLIATAVF-VLMPMMPTVAILTATVLFLLTLLEVAVAMIQAYVFVLLLSLYLQ 224
Cdd:MTH00175  159 ETLSYLIRAISLGVRLAANISAGHLLFAILSGFAFnMLSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLG 238


                  ...
gi 1150149556 225 ENV 227
Cdd:MTH00175  239 DTI 241
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 49-225 1.07e-22

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 91.29  E-value: 1.07e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  49 WLINRFTNQLMMPLNVKGHKWALLLASLMMFLVTINMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTIA-LG 127
Cdd:COG0356    37 MLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKGLGGyLK 116

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556 128 HLLPEGTPIPLIPVLIIiETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLmpmmpTVAILTATVLFLLTLLEVAV 207
Cdd:COG0356   117 HLFFPPFPWLAPLMLPI-EIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFL-----LLGVLSLLLPVAWTAFELLV 190

                         170
                  ....*....|....*...
gi 1150149556 208 AMIQAYVFVLLLSLYLQE 225
Cdd:COG0356   191 GFLQAYIFTMLTAVYISL 208
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 65-225 9.91e-20

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 84.08  E-value: 9.91e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  65 KGHKWALLLASLMMFLVTINMLGLLP-YTFTPTTQLSLNMGLAVPLWLATVIIGMRNQptiALGHLLPEGTPIPLIPVLI 143
Cdd:PRK05815   68 KGKKFAPLAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGIKKK---GLGGYLKEFYLQPHPLLLP 144

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556 144 IiETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLMPMMPTVAILTatvlFLLTLLEVAVAMIQAYVFVLLLSLYL 223
Cdd:PRK05815  145 I-EIISEFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLALAPLILP----VAWTIFEIFVGTLQAYIFMMLTIVYI 219


                  ..
gi 1150149556 224 QE 225
Cdd:PRK05815  220 SM 221
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 39-227 8.29e-17

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 76.52  E-value: 8.29e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  39 INSRITTIQGWLINRFTNQLMMPLNVKGHKWALLLASLMMFLVTINMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGM 118
Cdd:MTH00174   60 VPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGL 139

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556 119 RNQPTIALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLMPMMPTV-AILTATVL 197
Cdd:MTH00174  140 ITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIgSFVPFAIL 219

                         170       180       190
                  ....*....|....*....|....*....|
gi 1150149556 198 FLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
Cdd:MTH00174  220 IFVTILEMAVAIIQAYVFTLLTIVYLRDTV 249
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 73-223 2.27e-15

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 73.62  E-value: 2.27e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  73 LASLMMFLVTINMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETISLFI 152
Cdd:PRK13419  174 LLTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFITQYAAIKAHGIKGYLAHLTGGTHWSLWIIMIPIEFIGLFT 253

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1150149556 153 RPLALGVRLTANLTAGHLLIQLIATAVFVLMPMMPTVAILTATVLFLLtLLEVAVAMIQAYVFVLLLSLYL 223
Cdd:PRK13419  254 KPFALTVRLFANMTAGHIVILSLIFISFILKSYIVAVAVSVPFAIFIY-LLELFVAFLQAYIFTMLSALFI 323
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 75-225 4.26e-11

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 59.99  E-value: 4.26e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  75 SLMMFLVTINMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQptIALGHLLP-EGTPIPLIPVLIIIETISLFIR 153
Cdd:MTH00087   57 FTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKS--EKFSVYLSkGSDSFLKTFSMLFVEIVSELSR 134

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1150149556 154 PLALGVRLTANLTAGHLLIQLIATAVFVLMPMMptvailtatvlFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
Cdd:MTH00087  135 PLALTLRLTVNLMVGHLISSLLNFLGEKYVWLS-----------ILAIMMECFVAFIQSYIFSRLIYLYLNE 195
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 94-223 7.07e-08

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 51.81  E-value: 7.07e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  94 TPTTQLSLNMGLAVPLWLATVIIGMRNQPTIALGHLLPEGTPIPLIPVLIIIETI-SLFIRPLALGVRLTANLTAGHLLI 172
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1150149556 173 qlIATAVFVLMPMMPTVAILTATVLFLLTLLEVAVAMIQAYVFVLLLSLYL 223
Cdd:PRK13417  297 --LALMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLFV 345
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 72-223 1.29e-03

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 38.57  E-value: 1.29e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150149556  72 LLASLMMFLVTINMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTIA-LGHLLpegtpiPLIPVLIIIETISL 150
Cdd:PRK13420   77 FVGTLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFGIRAEGLREyLKHYL------SPSPFLLPFHLISE 150

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1150149556 151 FIRPLALGVRLTANLTAghllIQLIATAVFVLMPMMPTVAILtatvlflltLLEVAVAMIQAYVFVLLLSLYL 223
Cdd:PRK13420  151 ITRTLALAVRLFGNIMS----LELAALLVLLVAGFLVPVPIL---------MLHIIEALVQAYIFGMLALIYI 210
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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