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Conserved domains on  [gi|1863124799|ref|YP_009861092|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Arius dispar]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 2.60e-66

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 195.52  E-value: 2.60e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799   1 MNLVMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGN 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1863124799  81 QLPDPTYTLLWAATILILLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 2.60e-66

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 195.52  E-value: 2.60e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799   1 MNLVMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGN 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1863124799  81 QLPDPTYTLLWAATILILLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-113 7.66e-25

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 89.79  E-value: 7.66e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799  20 LVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLlpLPWGNQLPD-PTYTLLWAATILIL 98
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRElGWFGFVEMLIFIAI 79

                          90
                  ....*....|....*
gi 1863124799  99 LTLGLIYEWMQGGLE 113
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-114 1.07e-21

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 82.48  E-value: 1.07e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799   4 VMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLlpLPWGNQLP 83
Cdd:COG0838     8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1863124799  84 D-PTYTLLWAATILILLTLGLIYEWMQGGLEW 114
Cdd:COG0838    86 ElGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 2.60e-66

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 195.52  E-value: 2.60e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799   1 MNLVMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGN 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1863124799  81 QLPDPTYTLLWAATILILLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-116 9.60e-57

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 171.33  E-value: 9.60e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799   3 LVMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGNQL 82
Cdd:MTH00069    1 LIMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1863124799  83 PDPTYTLLWAATILILLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00069   81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-115 2.52e-50

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 155.04  E-value: 2.52e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799   2 NLVMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGNQ 81
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1863124799  82 LPDPTYTLLWAATILILLTLGLIYEWMQGGLEWA 115
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-116 3.03e-46

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 144.70  E-value: 3.03e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799   1 MNLvMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGN 80
Cdd:MTH00106    1 MNL-MLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1863124799  81 QLPDPTYTLLWAATILILLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00106   80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 1.09e-38

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 125.86  E-value: 1.09e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799   1 MNLVMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGN 80
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1863124799  81 QLPDPTYTLLWAATILILLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00042   81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-114 6.10e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 123.85  E-value: 6.10e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799   1 MNLVMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGN 80
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1863124799  81 QLPDPTYtlLWAATILILLTLGLIYEWMQGGLEW 114
Cdd:MTH00203   81 QLSSLSL--LLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 3.30e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 99.16  E-value: 3.30e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799   1 MNLVMIILLISTALSLVLALVSFWLPQMSP-DAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWG 79
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYsDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1863124799  80 NQLPDPTYTLLWAATILILLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 1-114 3.76e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 96.38  E-value: 3.76e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799   1 MNLVMIILLISTALSLVLALVSFwlpQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGN 80
Cdd:MTH00161    3 LIILLIILLISIILMILASLLSK---KSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIF 79

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1863124799  81 QLPDPTYTLLWAATILILLTLGLIYEWMQGGLEW 114
Cdd:MTH00161   80 KTSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-113 7.66e-25

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 89.79  E-value: 7.66e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799  20 LVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLlpLPWGNQLPD-PTYTLLWAATILIL 98
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRElGWFGFVEMLIFIAI 79

                          90
                  ....*....|....*
gi 1863124799  99 LTLGLIYEWMQGGLE 113
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 4-114 8.45e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 87.84  E-value: 8.45e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799   4 VMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLlpLPWGNQLP 83
Cdd:MTH00055    8 IFILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYN 85

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1863124799  84 DPTYTLLWAATILILLTLG-LIYEWMQGGLEW 114
Cdd:MTH00055   86 QIGLFGFWVMYLFLIILTIgLIYEWVKGGLEW 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 1.56e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 87.36  E-value: 1.56e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799   1 MNLVMIILLISTALSLVLALVSFWLPQMS-PDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWG 79
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSlMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1863124799  80 NQLPDPTYTLLWAATILILLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 4-115 1.01e-22

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 85.30  E-value: 1.01e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799   4 VMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLlpLPWGNQLP 83
Cdd:PRK06602   11 FLIFLIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFR 88

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1863124799  84 DPTYTLLWAATILILLTLG-LIYEWMQGGLEWA 115
Cdd:PRK06602   89 EIGWLGFVEAMIFILVLLVgLVYLWRKGALDWE 121
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-115 4.95e-22

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 83.37  E-value: 4.95e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799   1 MNLVMIILLISTALSLVLALVSFWLPQMSP-DAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWG 79
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTaDREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1863124799  80 NQLPDPTYTLLWAATILILLTLGLIYEWMQGGLEWA 115
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 4-114 1.03e-21

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 82.42  E-value: 1.03e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799   4 VMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGNQLP 83
Cdd:MTH00018    3 LFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQI 82

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1863124799  84 DPtYTLLWAATILILLTLGLIYEWMQGGLEW 114
Cdd:MTH00018   83 AP-FGFWTMVGFLFILTLGLIYEWIKGGLEW 112
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-114 1.07e-21

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 82.48  E-value: 1.07e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799   4 VMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLlpLPWGNQLP 83
Cdd:COG0838     8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1863124799  84 D-PTYTLLWAATILILLTLGLIYEWMQGGLEW 114
Cdd:COG0838    86 ElGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 1-114 9.69e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 67.65  E-value: 9.69e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799   1 MNLVMIILLISTALSLVLALVSFwlpqMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLlpLPWG- 79
Cdd:MTH00030   14 LGVGIILLLVSISFTLGNSRIGL----TKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSi 87

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1863124799  80 --NQLPDPTYTLLWAatILILLTLGLIYEWMQGGLEW 114
Cdd:MTH00030   88 vfNQLNLFSFWIVYT--FLIVLAIGLAYEWIKGGLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 4-114 2.09e-09

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 51.21  E-value: 2.09e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799   4 VMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLP--FSLRFFLIAILFLLFDLEIALLLPlpWGNQ 81
Cdd:PRK07928    7 ILVLGALAAAFAVVSVVVASLVGPKRYNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVS 84

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1863124799  82 LPD-PTYTLLWAATILILLTLGLIYEWMQGGLEW 114
Cdd:PRK07928   85 FDAlGVFGLVEMALFMLTVFVAYAYVWRRGGLEW 118
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-74 8.55e-09

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 49.12  E-value: 8.55e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1863124799   1 MNLVMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLL 74
Cdd:MTH00092    1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
ndhC CHL00022
NADH dehydrogenase subunit 3
 2-75 1.85e-08

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 48.44  E-value: 1.85e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1863124799   2 NLVMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLP 75
Cdd:CHL00022    8 DIFWAFLIISSLIPILAFLISGLLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYP 81
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
3-114 8.53e-07

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 44.35  E-value: 8.53e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799   3 LVMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPlpWG--- 79
Cdd:PRK07756   11 IVLIFLLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAvay 88

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1863124799  80 NQLPdpTYTLLWAATILILLTLGLIYEWMQGGLEW 114
Cdd:PRK07756   89 DKLG--LFALIEMLIFVVMLLVGLAYAWKKKVLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
5-75 1.65e-05

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 41.19  E-value: 1.65e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1863124799   5 MIILLISTALSLVLALVSFW---LPQMSPDAEKLSPYECGFDPLGSARlPFSLRFFLIAILFLLFDLEIALLLP 75
Cdd:PRK08489   15 VLLVLTFVAFFLTTRLARFIsrkLAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMFP 87
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 36-77 4.89e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 39.50  E-value: 4.89e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1863124799  36 SPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLP 77
Cdd:MTH00060   39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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