|
Name |
Accession |
Description |
Interval |
E-value |
| ND3 |
MTH00136 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
2.60e-66 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177194 [Multi-domain] Cd Length: 116 Bit Score: 195.52 E-value: 2.60e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799 1 MNLVMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGN 80
Cdd:MTH00136 1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 1863124799 81 QLPDPTYTLLWAATILILLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00136 81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
|
|
| ND3 |
MTH00069 |
NADH dehydrogenase subunit 3; Provisional |
3-116 |
9.60e-57 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177141 [Multi-domain] Cd Length: 114 Bit Score: 171.33 E-value: 9.60e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799 3 LVMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGNQL 82
Cdd:MTH00069 1 LIMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80
|
90 100 110
....*....|....*....|....*....|....
gi 1863124799 83 PDPTYTLLWAATILILLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00069 81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
|
|
| ND3 |
MTH00113 |
NADH dehydrogenase subunit 3; Provisional |
2-115 |
2.52e-50 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177175 [Multi-domain] Cd Length: 114 Bit Score: 155.04 E-value: 2.52e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799 2 NLVMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGNQ 81
Cdd:MTH00113 1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80
|
90 100 110
....*....|....*....|....*....|....
gi 1863124799 82 LPDPTYTLLWAATILILLTLGLIYEWMQGGLEWA 115
Cdd:MTH00113 81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
|
|
| ND3 |
MTH00106 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
3.03e-46 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177168 [Multi-domain] Cd Length: 115 Bit Score: 144.70 E-value: 3.03e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799 1 MNLvMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGN 80
Cdd:MTH00106 1 MNL-MLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79
|
90 100 110
....*....|....*....|....*....|....*.
gi 1863124799 81 QLPDPTYTLLWAATILILLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00106 80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
|
|
| ND3 |
MTH00042 |
NADH dehydrogenase subunit 3; Validated |
1-116 |
1.09e-38 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 177117 [Multi-domain] Cd Length: 116 Bit Score: 125.86 E-value: 1.09e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799 1 MNLVMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGN 80
Cdd:MTH00042 1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 1863124799 81 QLPDPTYTLLWAATILILLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00042 81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
|
|
| ND3 |
MTH00203 |
NADH dehydrogenase subunit 3; Provisional |
1-114 |
6.10e-38 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214456 [Multi-domain] Cd Length: 112 Bit Score: 123.85 E-value: 6.10e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799 1 MNLVMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGN 80
Cdd:MTH00203 1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80
|
90 100 110
....*....|....*....|....*....|....
gi 1863124799 81 QLPDPTYtlLWAATILILLTLGLIYEWMQGGLEW 114
Cdd:MTH00203 81 QLSSLSL--LLAFLFLILLTLGLIYEWLQGGLEW 112
|
|
| ND3 |
MTH00148 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
3.30e-28 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214433 [Multi-domain] Cd Length: 117 Bit Score: 99.16 E-value: 3.30e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799 1 MNLVMIILLISTALSLVLALVSFWLPQMSP-DAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWG 79
Cdd:MTH00148 1 MLSILLSLLFALILSPVLLLLGLVLSKRSYsDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80
|
90 100 110
....*....|....*....|....*....|....*..
gi 1863124799 80 NQLPDPTYTLLWAATILILLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00148 81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
|
|
| ND3 |
MTH00161 |
NADH dehydrogenase subunit 3; Provisional |
1-114 |
3.76e-27 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177217 [Multi-domain] Cd Length: 113 Bit Score: 96.38 E-value: 3.76e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799 1 MNLVMIILLISTALSLVLALVSFwlpQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGN 80
Cdd:MTH00161 3 LIILLIILLISIILMILASLLSK---KSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIF 79
|
90 100 110
....*....|....*....|....*....|....
gi 1863124799 81 QLPDPTYTLLWAATILILLTLGLIYEWMQGGLEW 114
Cdd:MTH00161 80 KTSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
|
|
| Oxidored_q4 |
pfam00507 |
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; |
20-113 |
7.66e-25 |
|
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
Pssm-ID: 459838 [Multi-domain] Cd Length: 94 Bit Score: 89.79 E-value: 7.66e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799 20 LVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLlpLPWGNQLPD-PTYTLLWAATILIL 98
Cdd:pfam00507 2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRElGWFGFVEMLIFIAI 79
|
90
....*....|....*
gi 1863124799 99 LTLGLIYEWMQGGLE 113
Cdd:pfam00507 80 LLVGLVYAWKKGALE 94
|
|
| ND3 |
MTH00055 |
NADH dehydrogenase subunit 3; Provisional |
4-114 |
8.45e-24 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177128 [Multi-domain] Cd Length: 118 Bit Score: 87.84 E-value: 8.45e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799 4 VMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLlpLPWGNQLP 83
Cdd:MTH00055 8 IFILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYN 85
|
90 100 110
....*....|....*....|....*....|..
gi 1863124799 84 DPTYTLLWAATILILLTLG-LIYEWMQGGLEW 114
Cdd:MTH00055 86 QIGLFGFWVMYLFLIILTIgLIYEWVKGGLEW 117
|
|
| ND3 |
MTH00202 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
1.56e-23 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214455 [Multi-domain] Cd Length: 117 Bit Score: 87.36 E-value: 1.56e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799 1 MNLVMIILLISTALSLVLALVSFWLPQMS-PDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWG 79
Cdd:MTH00202 1 MLLILFMSILSILISSLLFLVSWMLSFRSlMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80
|
90 100 110
....*....|....*....|....*....|....*..
gi 1863124799 80 NQLPDPTYTLLWAATILILLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00202 81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
|
|
| PRK06602 |
PRK06602 |
NADH:ubiquinone oxidoreductase subunit A; Validated |
4-115 |
1.01e-22 |
|
NADH:ubiquinone oxidoreductase subunit A; Validated
Pssm-ID: 180638 [Multi-domain] Cd Length: 121 Bit Score: 85.30 E-value: 1.01e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799 4 VMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLlpLPWGNQLP 83
Cdd:PRK06602 11 FLIFLIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFR 88
|
90 100 110
....*....|....*....|....*....|...
gi 1863124799 84 DPTYTLLWAATILILLTLG-LIYEWMQGGLEWA 115
Cdd:PRK06602 89 EIGWLGFVEAMIFILVLLVgLVYLWRKGALDWE 121
|
|
| ND3 |
MTH00012 |
NADH dehydrogenase subunit 3; Validated |
1-115 |
4.95e-22 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164588 [Multi-domain] Cd Length: 117 Bit Score: 83.37 E-value: 4.95e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799 1 MNLVMIILLISTALSLVLALVSFWLPQMSP-DAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWG 79
Cdd:MTH00012 1 MSLMMIPMMISLILPPLVLGAAWVLAARSTaDREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 1863124799 80 NQLPDPTYTLLWAATILILLTLGLIYEWMQGGLEWA 115
Cdd:MTH00012 81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
|
|
| ND3 |
MTH00018 |
NADH dehydrogenase subunit 3; Validated |
4-114 |
1.03e-21 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164592 [Multi-domain] Cd Length: 113 Bit Score: 82.42 E-value: 1.03e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799 4 VMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGNQLP 83
Cdd:MTH00018 3 LFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQI 82
|
90 100 110
....*....|....*....|....*....|.
gi 1863124799 84 DPtYTLLWAATILILLTLGLIYEWMQGGLEW 114
Cdd:MTH00018 83 AP-FGFWTMVGFLFILTLGLIYEWIKGGLEW 112
|
|
| NuoA |
COG0838 |
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ... |
4-114 |
1.07e-21 |
|
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440600 [Multi-domain] Cd Length: 117 Bit Score: 82.48 E-value: 1.07e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799 4 VMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLlpLPWGNQLP 83
Cdd:COG0838 8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85
|
90 100 110
....*....|....*....|....*....|..
gi 1863124799 84 D-PTYTLLWAATILILLTLGLIYEWMQGGLEW 114
Cdd:COG0838 86 ElGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
|
|
| ND3 |
MTH00030 |
NADH dehydrogenase subunit 3; Provisional |
1-114 |
9.69e-16 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 164603 [Multi-domain] Cd Length: 123 Bit Score: 67.65 E-value: 9.69e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799 1 MNLVMIILLISTALSLVLALVSFwlpqMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLlpLPWG- 79
Cdd:MTH00030 14 LGVGIILLLVSISFTLGNSRIGL----TKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSi 87
|
90 100 110
....*....|....*....|....*....|....*..
gi 1863124799 80 --NQLPDPTYTLLWAatILILLTLGLIYEWMQGGLEW 114
Cdd:MTH00030 88 vfNQLNLFSFWIVYT--FLIVLAIGLAYEWIKGGLEW 122
|
|
| PRK07928 |
PRK07928 |
NADH dehydrogenase subunit A; Validated |
4-114 |
2.09e-09 |
|
NADH dehydrogenase subunit A; Validated
Pssm-ID: 181171 [Multi-domain] Cd Length: 119 Bit Score: 51.21 E-value: 2.09e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799 4 VMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLP--FSLRFFLIAILFLLFDLEIALLLPlpWGNQ 81
Cdd:PRK07928 7 ILVLGALAAAFAVVSVVVASLVGPKRYNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVS 84
|
90 100 110
....*....|....*....|....*....|....
gi 1863124799 82 LPD-PTYTLLWAATILILLTLGLIYEWMQGGLEW 114
Cdd:PRK07928 85 FDAlGVFGLVEMALFMLTVFVAYAYVWRRGGLEW 118
|
|
| ND3 |
MTH00092 |
NADH dehydrogenase subunit 3; Provisional |
1-74 |
8.55e-09 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177155 Cd Length: 111 Bit Score: 49.12 E-value: 8.55e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1863124799 1 MNLVMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLL 74
Cdd:MTH00092 1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
|
|
| ndhC |
CHL00022 |
NADH dehydrogenase subunit 3 |
2-75 |
1.85e-08 |
|
NADH dehydrogenase subunit 3
Pssm-ID: 176964 [Multi-domain] Cd Length: 120 Bit Score: 48.44 E-value: 1.85e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1863124799 2 NLVMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLP 75
Cdd:CHL00022 8 DIFWAFLIISSLIPILAFLISGLLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYP 81
|
|
| PRK07756 |
PRK07756 |
NADH-quinone oxidoreductase subunit A; |
3-114 |
8.53e-07 |
|
NADH-quinone oxidoreductase subunit A;
Pssm-ID: 169084 [Multi-domain] Cd Length: 122 Bit Score: 44.35 E-value: 8.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1863124799 3 LVMIILLISTALSLVLALVSFWLPQMSPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPlpWG--- 79
Cdd:PRK07756 11 IVLIFLLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAvay 88
|
90 100 110
....*....|....*....|....*....|....*
gi 1863124799 80 NQLPdpTYTLLWAATILILLTLGLIYEWMQGGLEW 114
Cdd:PRK07756 89 DKLG--LFALIEMLIFVVMLLVGLAYAWKKKVLQW 121
|
|
| PRK08489 |
PRK08489 |
NAD(P)H-quinone oxidoreductase subunit 3; |
5-75 |
1.65e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 3;
Pssm-ID: 181448 [Multi-domain] Cd Length: 129 Bit Score: 41.19 E-value: 1.65e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1863124799 5 MIILLISTALSLVLALVSFW---LPQMSPDAEKLSPYECGFDPLGSARlPFSLRFFLIAILFLLFDLEIALLLP 75
Cdd:PRK08489 15 VLLVLTFVAFFLTTRLARFIsrkLAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMFP 87
|
|
| ND3 |
MTH00060 |
NADH dehydrogenase subunit 3; Provisional |
36-77 |
4.89e-05 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177132 Cd Length: 116 Bit Score: 39.50 E-value: 4.89e-05
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 1863124799 36 SPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLP 77
Cdd:MTH00060 39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
|
|
|