|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
2-572 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 668.00 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 2 LSICKVYFYLFMFFSFNLFFFSLYLMSTDLSYLLEFNILSLNSVSLVFTVLLDWMSLLFMSFVLFISAVVINYSEEYMMG 81
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 82 DVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALVIYYQNVKSSNAGMLTALTNRIGDVALLMSIAWMLN 161
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 162 FGSWNYVFYLEFPK-DGYLGIVATFVVLAAITKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAF-SG 239
Cdd:MTH00165 161 FGSWNFIFYLDFMKnSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLfSS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 240 DLLKFLLVLSMMTMFMAGLGANFEYDLKKIIALSTLSQLGLMISILCLGSHDLAFFHLLTHALFKALLFMCAGAIIHSLG 319
Cdd:MTH00165 241 FFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 320 NCQDIRYMGGLVSSMPLTCAYFNICNFALCGLPFLSGFYSKDLIVESMSMGYLNMFVYVVFYLSVGLTACYSFRLVYYCF 399
Cdd:MTH00165 321 NSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSM 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 400 TGEFNLLSSHGLSDEPGPMLESMGILIFMVIFGGSLLMWLMFPTPVFICLPFYMKVFALGLIFLGMWVGYEASKFYLTDK 479
Cdd:MTH00165 401 SGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 480 PIGLLYHDFSSFSANMWNLTILSTFGVSPLPMHLGSVYLKGLDQGWLEYYGSQNLYKTLKGSSMFMQLLSRNHMKVFLML 559
Cdd:MTH00165 481 LKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLS 560
|
570
....*....|...
gi 1999117240 560 TLFWLMFLFVSMF 572
Cdd:MTH00165 561 FLLWMIILLLLFL 573
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
25-572 |
1.66e-172 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 500.52 E-value: 1.66e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 25 YLMSTDLSYLLEFNILSLNSVSLVFTVLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLII 104
Cdd:MTH00151 24 YFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLSMNLLIF 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 105 SPNLVSILLGWDGLGLVSYALVIYYQNVKSSNAGMLTALTNRIGDVALLMSIAWMLNFGSWNYVFYLEFPkdgYLGIVAT 184
Cdd:MTH00151 104 IPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSILSMWDFK---LSGWLGL 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 185 FVVLAAITKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF--NAAFSGDLLKFLLVLSMMTMFMAGLGANF 262
Cdd:MTH00151 181 LLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFfpFLSSSSGFSSFLLFISLLTLLMAGISACY 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 263 EYDLKKIIALSTLSQLGLMISILCLGSHDLAFFHLLTHALFKALLFMCAGAIIHSLGNCQDIRYMGGLVSSMPLTCAYFN 342
Cdd:MTH00151 261 ENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLSLPLTSGCLN 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 343 ICNFALCGLPFLSGFYSKDLIVESMSMGYLNMFVYVVFYLSVGLTACYSFRLVYYCFTGEFNLLSSHGLSDEPGPMLESM 422
Cdd:MTH00151 341 ISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSDEDFYVSLPM 420
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 423 GILIFMVIFGGSLLMWLMFPTPVFICLPFYMKVFALGLIFLGMWVGYEASKFYLTDKPIGLLYHDFSSfsanMWNLTILS 502
Cdd:MTH00151 421 LLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVKLSFFFSS----MWFLSPLS 496
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 503 TFGVSPLPMHLGSVYLKGLDQGWLEYYGSQNLYKTLKgSSMFMQLLSRNHMKVFLMLTLFWLMFLFVSMF 572
Cdd:MTH00151 497 SQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANK-SFSVLNESWPVKWFNFFIGLILLLVLFLVVIS 565
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
25-571 |
4.54e-164 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 479.14 E-value: 4.54e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 25 YLMSTDLSYLLEFNILSLNSVSLVFTVLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLII 104
Cdd:MTH00209 22 IFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLIF 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 105 SPNLVSILLGWDGLGLVSYALVIYYQNVKSSNAGMLTALTNRIGDVALLMSIAWMLNFGSWNyVFYLEFPKdGYLGIVAT 184
Cdd:MTH00209 102 VPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWN-IFYLNFNS-NLGSVISV 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 185 FVVLAAITKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAFSGDLL--KFLLVLSMMTMFMAGLGANF 262
Cdd:MTH00209 180 LIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFfsMSLLLLGSLTTLMASMSANV 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 263 EYDLKKIIALSTLSQLGLMISILCLGSHDLAFFHLLTHALFKALLFMCAGAIIHSLGNCQDIRYMGGLVSSMPLTCAYFN 342
Cdd:MTH00209 260 ESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSICLN 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 343 ICNFALCGLPFLSGFYSKDLIVESMSMGYLNMFVYVVFYLSVGLTACYSFRLVYYCFTGEFNLLSSHGLSDEPGPMLESM 422
Cdd:MTH00209 340 IANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLNLKPM 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 423 GILIFMVIFGGSLLMWLMFPTPVFICLPFYMKVFALGLIFLGMWVGYEASKFYLtdkpIGLLYHDFSSFSANMWNLTILS 502
Cdd:MTH00209 420 LVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNF----FLIKGYKVNYFLSQMWFLPDLS 495
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1999117240 503 TFGVSPLPMHLGSVYLKGLDQGWLEYYGSQNLYKTLKGSSMFMQLLSRNHMKVFLMLTLFWLMFLFVSM 571
Cdd:MTH00209 496 SQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLGVILFM 564
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-574 |
1.05e-157 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 463.08 E-value: 1.05e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 1 MLSICKVYFYLFMFFSFNLFFFSLYLMSTDLSYLLEFNILSLNSVSLVFTVLLDWMSLLFMSFVLFISAVVINYSEEYMM 80
Cdd:MTH00207 3 MFKPSSIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 81 GDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALVIYYQNVKSSNAGMLTALTNRIGDVALLMSIAWML 160
Cdd:MTH00207 83 EDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 161 NFGSWNYVFYLEFPKDGYLGIVatfVVLAAITKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAFSGD 240
Cdd:MTH00207 163 NQGHWSITNMWQTDMNNYIALS---IMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSST 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 241 LL--KFLLVLSMMTMFMAGLGANFEYDLKKIIALSTLSQLGLMISILCLGSHDLAFFHLLTHALFKALLFMCAGAIIHSL 318
Cdd:MTH00207 240 YWfnPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 319 GNCQDIRYMGGLVSSMPLTCAYFNICNFALCGLPFLSGFYSKDLIVESMSMGYLNMFVYVVFYLSVGLTACYSFRLVYYC 398
Cdd:MTH00207 320 HHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAV 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 399 FTGEFNLLSSHGLSDEPGPMLESMGILIFMVIFGGSLLMWLMFPTPVFICLPFYMKVFALGLIFLGMWVGYEASKFYLTD 478
Cdd:MTH00207 400 LWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITK 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 479 KPIGLLYHDFSSFSANMWNLTILSTFGVSPLPMHLGSVYLKGLDQGWLEYYGSQNLYKTLKGSSMFMQLLSRNHMKVFLM 558
Cdd:MTH00207 480 TPLLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLM 559
|
570
....*....|....*.
gi 1999117240 559 LTlfwLMFLFVSMFIN 574
Cdd:MTH00207 560 MS---FVLLTIIIIMT 572
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
34-574 |
6.79e-117 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 358.88 E-value: 6.79e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 34 LLEFNILSLNSVSLVFTVLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILL 113
Cdd:MTH00211 58 LTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFI 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 114 GWDGLGLVSYALVIYYQNVKSSNAGMLTALT-NRIGDVALLMSIAWML-NFGSWNYVFYLEFPKDGYLGIVatFVVLAAI 191
Cdd:MTH00211 138 GWEGVGIMSFLLISWWYGRSDANTAALQAVIyNRIGDIGLLLSMVWLLlNLNSWEISQLFILNLDLTLFLL--GLLLAAM 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 192 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAF--SGDLLKFLLVLSMMTMFMAGLGANFEYDLKKI 269
Cdd:MTH00211 216 GKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFqnNQLILGAVLLLGALTMLFGALCALTQNDIKKI 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 270 IALSTLSQLGLMISILCLGSHDLAFFHLLTHALFKALLFMCAGAIIHSLGNCQDIRYMGGLVSSMPLTCAYFNICNFALC 349
Cdd:MTH00211 296 VAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALM 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 350 GLPFLSGFYSKDLIVESMSMGYLNMFVYVVFYLSVGLTACYSFRLVYYCFTGEFNLLSSHGLSDEPGPMLESMGILIFMV 429
Cdd:MTH00211 376 GFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGS 455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 430 IFGGSLLMWLMFPTPVFI-CLPFYMKVFALGLIFLGMWVGYEASKFYLTDKPIGLLyhdfsSFSANMWNLTILSTFGVSP 508
Cdd:MTH00211 456 ILAGFIITSNLPPEKPEIlSLPFLLKLMPLLVTIVGLLLGLELVNLTHKQLKTSTL-----SFSNMLGYYPPIIHRLLPK 530
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1999117240 509 LPMHLG-SVYLKGLDQGWLEYYGSQNLYKTLKGSSMFMQLLSRNHMKVFLMLTLFWLMFLFVSMFIN 574
Cdd:MTH00211 531 LSLKWGqTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLLSLLLILLLFLLF 597
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
40-469 |
2.57e-104 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 326.72 E-value: 2.57e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 40 LSLNSVSLVFTVLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLG 119
Cdd:COG1009 65 IPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVG 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 120 LVSYALVIYYQNVKSSNAGMLTA-LTNRIGDVALLMSIAWMLN-FGSWNYVFYLEFPKD----GYLGIVATFVVLAAITK 193
Cdd:COG1009 145 LCSYLLIGFWYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAiAGTLNFSELLAAAPTilssPLLTLILLLLLLGAFGK 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 194 SAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAFSG--DLLKFLLVLSMMTMFMAGLGANFEYDLKKIIA 271
Cdd:COG1009 225 SAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALspVWLTVVAIIGAITALFAALIALAQTDIKRVLA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 272 LSTLSQLGLMISILCLGSHDLAFFHLLTHALFKALLFMCAGAIIHSLGNcQDIRYMGGLVSSMPLTCAYFNICNFALCGL 351
Cdd:COG1009 305 YSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATGT-RDIRKMGGLRKKMPITAITFLIGALSLAGI 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 352 PFLSGFYSKDLIVESM-SMGYLNMFVYVVFYLSVGLTACYSFRLVYYCFTGEFNLLSSHGLSDEPGPMLESMGILIFMVI 430
Cdd:COG1009 384 PPFAGFFSKEAILEAAlEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSL 463
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1999117240 431 FGGSLLMWLM---------FPTPVFICLPFYMKVFALGLIFLGMWVGY 469
Cdd:COG1009 464 VLGLLLPGLLegllapaavLGGELHLAHGLLLNALPLLLSLLGIALGY 511
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
37-573 |
2.25e-91 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 293.80 E-value: 2.25e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 37 FNILSLNSVSLVFTVLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWD 116
Cdd:MTH00208 89 SNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWE 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 117 GLGLVSYALVIYYQNVKSSNAGMLTA-LTNRIGDVALL--MSIAwMLNFGSWNY--VFYLEFPKDGYLGIVATFVVLAAI 191
Cdd:MTH00208 169 GVGFLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIIlfLSLS-LINFNSWNLneILSLNNSNSFLINILLFGILLAAA 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 192 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAFSGDL--LKFLLVLSMMTMFMAGLGANFEYDLKKI 269
Cdd:MTH00208 248 GKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPwfLSLCLILGSLTALFAASTAISQHDIKKI 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 270 IALSTLSQLGLMISILCLGSHDLAFFHLLTHALFKALLFMCAGAIIHSLGNCQDIRYMGGLVSSMPLTCAYFNICNFALC 349
Cdd:MTH00208 328 IAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALM 407
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 350 GLPFLSGFYSKDLIVESMSMGYLNMFVYVVFYLSVGLTACYSFRLVYYCFTGEFNLLSSHGLSDEPGPMLESMGILIFMV 429
Cdd:MTH00208 408 GTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGT 487
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 430 IFGGSLLMWLMFPTPVFIcLPFYMKVFALGLIFLGMWVGYEaSKFYLTDKPIGLLYHDFSSFSANMWNLT-ILSTFGVSP 508
Cdd:MTH00208 488 IISGWFFSNFVFNLPPLT-LPLILKSLPLIVTIIGAAFSFS-FLLSLSSNPINSNFFSFLSNQWFFVNIShSIIISFSFF 565
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1999117240 509 LPMHLGSvylKGLDQGWLEYYGSQNLYKTLKGSSMFMQLLSRNHMKVFLMLTLFWLMFLFVSMFI 573
Cdd:MTH00208 566 TSLFGST---RTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFLLILTLSLI 627
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
37-465 |
2.09e-90 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 290.14 E-value: 2.09e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 37 FNILSLNSVSLVFTVLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWD 116
Cdd:MTH00004 66 WPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 117 GLGLVSYALVIYYQNVKSSNAGMLTALT-NRIGDVALLMSIAWM-LNFGSWNyvFYLEFPKDGYLGIVATFVVLAAITKS 194
Cdd:MTH00004 146 GVGIMSFLLIGWWSGRAEANTAALQAIIyNRIGDIGLILSMAWLaMTLNTWE--IQQLFSPTQTPTLPLLGLILAATGKS 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 195 AQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAF--SGDLLKFLLVLSMMTMFMAGLGANFEYDLKKIIAL 272
Cdd:MTH00004 224 AQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLqnNQTALTICLCLGALTTLFAATCALTQNDIKKIIAF 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 273 STLSQLGLMISILCLGSHDLAFFHLLTHALFKALLFMCAGAIIHSLGNCQDIRYMGGLVSSMPLTCAYFNICNFALCGLP 352
Cdd:MTH00004 304 STSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTP 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 353 FLSGFYSKDLIVESMSMGYLNMFVYVVFYLSVGLTACYSFRLVYYCFTGEFNLLSSHGLSDEPGPMLESMGILIFMVIFG 432
Cdd:MTH00004 384 FLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILA 463
|
410 420 430
....*....|....*....|....*....|....
gi 1999117240 433 GSLLMWLMFPT-PVFICLPFYMKVFALGLIFLGM 465
Cdd:MTH00004 464 GLLISSTILPTkTPPMTMPTTTKLAALIVTILGI 497
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
49-442 |
1.40e-89 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 288.41 E-value: 1.40e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 49 FTVLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALV-I 127
Cdd:TIGR01974 77 FGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIgF 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 128 YYQNVKSSNAGMLTALTNRIGDVALLMSIAWMLN-FGSWNY--VFYLEFPKD-GYLGIVATFVVLAAITKSAQIPFSSWL 203
Cdd:TIGR01974 157 WYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFGTLNFqeVFALAPGAFfSALTLICLLLFIGAMGKSAQLPLHTWL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 204 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAF--SGDLLKFLLVLSMMTMFMAGLGANFEYDLKKIIALSTLSQLGLM 281
Cdd:TIGR01974 237 PDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFelSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYM 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 282 ISILCLGSHDLAFFHLLTHALFKALLFMCAGAIIHSLGNCQDIRYMGGLVSSMPLTCAYFNICNFALCGLPFLSGFYSKD 361
Cdd:TIGR01974 317 FLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKD 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 362 LIVES-MSMGYLnMFVYVVFYLSVGLTACYSFRLVYYCFTGEFNLLSSHGLSDEPGPMLESMGILIFMVIFGGSLLMWLM 440
Cdd:TIGR01974 397 LILEAaFASGTH-SFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLF 475
|
..
gi 1999117240 441 FP 442
Cdd:TIGR01974 476 EF 477
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
37-567 |
1.40e-88 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 285.26 E-value: 1.40e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 37 FNILSLNSVSLVFTVLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWD 116
Cdd:MTH00066 64 FHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWE 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 117 GLGLVSYALV-IYYQNVKSSNAGMLTALTNRIGDVALLMSIAW-MLNFGSWNYVFYLEFPKDGYLGIVAtfVVLAAITKS 194
Cdd:MTH00066 144 GVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWELQQIFLLNDNSTLPLLG--LILAAAGKS 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 195 AQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAFSGD--LLKFLLVLSMMTMFMAGLGANFEYDLKKIIAL 272
Cdd:MTH00066 222 AQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNqtALTICLCLGALTTLFTAACALTQNDIKKIVAF 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 273 STLSQLGLMISILCLGSHDLAFFHLLTHALFKALLFMCAGAIIHSLGNCQDIRYMGGLVSSMPLTCAYFNICNFALCGLP 352
Cdd:MTH00066 302 STSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTP 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 353 FLSGFYSKDLIVESMSMGYLNMFVYVVFYLSVGLTACYSFRLVYYCFTGEFNLLSSHGLSDEPGPMLESMGILIFMVIFG 432
Cdd:MTH00066 382 FLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIA 461
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 433 GSLLMWLMFPT-PVFICLPFYMKVFALGLIFLGMWVGYEASKFYLTDKPIGLLYhdfsSFSaNMWNLTILSTFGVSP-LP 510
Cdd:MTH00066 462 GLLIIFNILPMkPQILTMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTKMH----SFS-NLLAFFPTIIHRLSPkTN 536
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1999117240 511 MHLG-SVYLKGLDQGWLEYYGSQNLYKT----LKGSSMFMQLLSRNHMKVFLMLTLFWLMFL 567
Cdd:MTH00066 537 LNSGqNIATHLTDMTWYEKSGPKGLTNQqlppIKTITNIQTGLIKTYLTLFLITLLLMLILL 598
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
49-481 |
2.97e-86 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 280.12 E-value: 2.97e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 49 FTVLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALV-I 127
Cdd:PRK06590 78 FGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIgF 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 128 YYQNVKSSNAGMLTALTNRIGDVALLMSIAWML-NFGSWNY--VFYLEFPKDGY----LGIVATFVVLAAITKSAQIPFS 200
Cdd:PRK06590 158 WYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFaEFGSLNYdeVFAAAPQFFGLgwsaLTLICLLLFIGAMGKSAQFPLH 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 201 SWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAF--SGDLLKFLLVLSMMTMFMAGLGANFEYDLKKIIALSTLSQL 278
Cdd:PRK06590 238 TWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFelSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQL 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 279 GLMISILCLGSHDLAFFHLLTHALFKALLFMCAGAIIHSLGNCQDIRYMGGLVSSMPLTCAYFNICNFALCGLPFLSGFY 358
Cdd:PRK06590 318 GYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFF 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 359 SKDLIVES-MSMGYLNMFVYVVFylSVGLTACYSFRLVYYCFTGEfNLLSSHGLSDEPGPMLESMGILIFMVIFGGSLLM 437
Cdd:PRK06590 398 SKDEILEAaFANGHINLFVAGLV--GAFLTAFYSFRLIFLVFHGK-EKEKIHHPHESPAVMTLPLIVLAVLSVFAGALIV 474
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1999117240 438 ------WLMFPTPVFIC----LPFYMKVFALGLIFLGMWVGYeasKFYLTDKPI 481
Cdd:PRK06590 475 ppflgvLPLTTELAHGEaehhLPVWVALLPLVVALAGIALAW---LLYLKKPTL 525
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
40-470 |
6.58e-85 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 275.96 E-value: 6.58e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 40 LSLNSVSLVFTVLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLG 119
Cdd:MTH00108 69 MTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVG 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 120 LVSYALVIYYQNVKSSNAGMLTA-LTNRIGDVALLMSIAW-MLNFGSWNY--VFYLEfPKDGYLGIVAtfVVLAAITKSA 195
Cdd:MTH00108 149 IMSFLLIGWWYGRTDANTAALQAiLYNRIGDIGFILAMAWfLLNLNSWDLqqIFMLN-PNNSNLPLMG--LLLAATGKSA 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 196 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAFSGDLLKFLLVL---SMMTMFMAgLGANFEYDLKKIIAL 272
Cdd:MTH00108 226 QFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLclgAITTLFTA-ICALTQNDIKKIVAF 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 273 STLSQLGLMISILCLGSHDLAFFHLLTHALFKALLFMCAGAIIHSLGNCQDIRYMGGLVSSMPLTCAYFNICNFALCGLP 352
Cdd:MTH00108 305 STSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMP 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 353 FLSGFYSKDLIVESMSMGYLNMFVYVVFYLSVGLTACYSFRLVYYCFTGE--FNLLSshgLSDEPGPML-ESMGILIFMV 429
Cdd:MTH00108 385 FLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQprFPPLI---TINENNPLLiNPIKRLLLGS 461
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 1999117240 430 IFGGSLLMWLMFPTPVF-ICLPFYMKVFALGLIFLGMWVGYE 470
Cdd:MTH00108 462 IFAGFLISNNIPPTTIPqMTMPLYLKLTALAVTILGFILALE 503
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
38-407 |
8.23e-78 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 257.45 E-value: 8.23e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 38 NILSLN-SVSLVFtvllDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWD 116
Cdd:MTH00137 74 NTLTFDiNISFKF----DHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 117 GLGLVSYALVIYYQNVKSSNAGMLTA-LTNRIGDVALLMSIAWML-NFGSWNY--VFYLefPKDGYLGIVATFVVLAAIT 192
Cdd:MTH00137 150 GVGIMSFLLIGWWYGRADANTAALQAvIYNRVGDIGLILAMAWMAtNLNSWEIqqIFAL--SKDFDLTLPLLGLILAATG 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 193 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAFSGDLLKFLLVL---SMMTMFMA--GLGANfeyDLK 267
Cdd:MTH00137 228 KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLclgALTTLFTAtcALTQN---DIK 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 268 KIIALSTLSQLGLMISILCLGSHDLAFFHLLTHALFKALLFMCAGAIIHSLGNCQDIRYMGGLVSSMPLTCAYFNICNFA 347
Cdd:MTH00137 305 KIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLA 384
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1999117240 348 LCGLPFLSGFYSKDLIVESMSMGYLNMFVYVVFYLSVGLTACYSFRLVYYCFTG--EFNLLS 407
Cdd:MTH00137 385 LTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGhpRFNPLS 446
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
26-405 |
7.61e-72 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 241.52 E-value: 7.61e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 26 LMSTDLSYLLEFNILSLNSVSLVFTVLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIIS 105
Cdd:MTH00020 51 LFNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTS 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 106 PNLVSILLGWDGLGLVSYALV-IYYQNVKSSNAGMLTALTNRIGDVALLMSIAWMLN-FGSWNY--VFYLEFPKDGY-LG 180
Cdd:MTH00020 131 DNYLQLFIGWEGVGLCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSLDFssVFNMVVSAPSSdIT 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 181 IVATFVVLAAITKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAFSGDLLKFLLV--LSMMTMFMAGL 258
Cdd:MTH00020 211 LICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtiVGSLTVFFAAT 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 259 GANFEYDLKKIIALSTLSQLGLMISILCLGSHDLAFFHLLTHALFKALLFMCAGAIIHSLGNCQDIRYMGGLVSSMPLTC 338
Cdd:MTH00020 291 VGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTY 370
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1999117240 339 AYFNICNFALCGLPFLSGFYSKDLIVESMSMGYLNMFVYVVFYLSVGLTACYSFRLVYYCFTGEFNL 405
Cdd:MTH00020 371 IFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNL 437
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
67-573 |
1.67e-71 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 240.68 E-value: 1.67e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 67 ISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALV-IYYQNVKSSNAGMLTALTN 145
Cdd:MTH00210 92 VSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWLTRIKANKAAIKAMLIN 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 146 RIGDVALLMSIAWMLN-FGSWNY----VFYLEFPKDGYLGIVATFVVLAAITKSAQIPFSSWLPAAMAAPTPVSALVHSS 220
Cdd:MTH00210 172 RVGDIGLVLAMIMILKeFGTLEFstisSLLVTNINKESLTIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAA 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 221 TLVTAGVYLLIRFNAAFSGD--LLKFLLVLSMMTMFMAGLGANFEYDLKKIIALSTLSQLGLMISILCLGSHDLAFFHLL 298
Cdd:MTH00210 252 TMVTAGVFLIIRSGPLFEGSplALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLM 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 299 THALFKALLFMCAGAIIHSLGNCQDIRYMGGLVSSMPLTCAYFNICNFALCGLPFLSGFYSKDLIVESMSMGYLNMFVYV 378
Cdd:MTH00210 332 NHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYW 411
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 379 VFYLSVGLTACYSFRLVYYCFTGEFNL--LSSHGLSDEPGPMLESMGILIFMVIFGGSLLMWLMFPTPVFICLPFYMKVF 456
Cdd:MTH00210 412 LGSFSALLTAFYSIRLIYLTFITNTNSkkEVFIGVHESSWNITFPLLLLAFGSIFVGYLGKEVVLSNVIPPIVPNSIKMI 491
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 457 ALGLIFLGM---WVGYEASKFYLTDKPIG---LLYHDFSSFSANMWNLT-ILSTFGVSPLPMHLGSVYLKGLDQGWLEYY 529
Cdd:MTH00210 492 PLLFSLLGAllaFVIYNSMVFLIKISRRGvsiRLYHVIYTFLNSAWQFNyVINHFIVKNIWKFGHLITYRIIDRGLLEII 571
|
490 500 510 520
....*....|....*....|....*....|....*....|....
gi 1999117240 530 GSQNLYKTLKGSSmfmQLLSRNHMKVFLMLTLfwLMFLFVSMFI 573
Cdd:MTH00210 572 GPRGISKVLIKLT---QKISNLQSGMVFNYAL--IMIIFTTLFI 610
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
47-463 |
3.82e-66 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 224.41 E-value: 3.82e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 47 LVFTVLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALV 126
Cdd:MTH00095 37 LSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLV 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 127 IYYQNVKSSNAGMLTALTNRIGDVALLMSIAWMLNFGSwnYVFYLEFpkdgYLGIVATFVVLAAITKSAQIPFSSWLPAA 206
Cdd:MTH00095 117 LFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSSY--YFFSFSF----FSSSMILMLLLTSFTKSAQFPFSSWLPKA 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 207 MAAPTPVSALVHSSTLVTAGVYLLIRFNAA-FSGDLLKFLLVLSMMTMFMAGLGANFEYDLKKIIALSTLSQLGLMISIL 285
Cdd:MTH00095 191 MSAPTPVSSLVHSSTLVTAGLILLMNFSYLiLNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTF 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 286 CLGSHDLAFFHLLTHALFKALLFMCAGAIIHSLGNCQDIRYMGGLVSSMPLTCAYFNICNFALCGLPFLSGFYSKDLIVE 365
Cdd:MTH00095 271 GSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILE 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 366 SMSMGYLNMFVYVVFYLSVGLTACYSFRLVYYCFTGEFNLLSSHGLSDEPGPMleSMGILIFMVIFGGSLLMWLMFPTPV 445
Cdd:MTH00095 351 LFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNVYSSSVLMNFL--SLMLVFFSVFFLWWLNFNLLNLPSL 428
|
410
....*....|....*...
gi 1999117240 446 FICLPFYMKVFALGLIFL 463
Cdd:MTH00095 429 FLYLDFYVPLFYLFMIML 446
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
51-567 |
3.16e-61 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 214.44 E-value: 3.16e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 51 VLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALVIYYQ 130
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 131 N-VKSSNAGMLTALTNRIGDVALLMSIAWM------LNFGSWNYVFYLEFPKD-GYLG------------IVATFVVLAA 190
Cdd:MTH00032 156 TrIQANKAAIKAIVVNRVGDVGVILGMVLIyktigsLDFLTFNGGSVGSGIMDrGYYGggayesplapfaIIGILLLIGC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 191 ITKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAFSGDLLKFLL--VLSMMTMFMAGLGANFEYDLKK 268
Cdd:MTH00032 236 IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIitIFGALTAFFAATVGLVQNDLKK 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 269 IIALSTLSQLGLMISILCL-GSHDLAFFHLLTHALFKALLFMCAGAIIHSLG-NCQDIRYMGGLVSSMPLTCAYFNICNF 346
Cdd:MTH00032 316 VIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSF 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 347 ALCGLPFLSGFYSKDLIVE----SMSMGYLNMFVYVVFYLSVG--------------------------------LTACY 390
Cdd:MTH00032 396 SIMGLPYLTGFYSKDLILEltysGRNMGIPFGSSLLKIQGDIGikkddrgsiggpegypsrgsafafwlgtvaalLTAFY 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 391 SFRLVYYCF-----TGEFNLLSSHgLSDEPGPMLESMGILIFMVIFGGSLLMWLMFPT-------PVFICLPFYMKVFAL 458
Cdd:MTH00032 476 SIRLVYITFiispnSPKESLISSH-INIVDKRVLTVLSLLCFGAIFVGYLIQDILIGDiehpivpPLIKVMPTLMGLFGM 554
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 459 GLIFLGMWVGYEASKFYLTDKPIGLLYHDFSSFSANMW--NLTILSTFGVSPLPMHLGSVYlKGLDQGWLEYYGSQNL-Y 535
Cdd:MTH00032 555 GLCLWAQKGTREGELYWGFDPIGPSFLLSIYSFLGGAWqgDHLINKLVAIPLFSFGHWGIY-KTLDRGWLELFGPQGIsT 633
|
570 580 590
....*....|....*....|....*....|..
gi 1999117240 536 KTLKGSSMFMQLLSRNHMKVFLMLTLFWLMFL 567
Cdd:MTH00032 634 IALRVSQFISNLQSGVISRYALVLLSFTIIFL 665
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
53-403 |
1.92e-59 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 209.49 E-value: 1.92e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 53 LDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALV-IYYQN 131
Cdd:PRK07376 89 IDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVgFWYDR 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 132 VKSSNAGMLTALTNRIGDVALLMSIawmLNFGSWNYVFYLEFPKDGYLGIVAT-------------FVVLAAITKSAQIP 198
Cdd:PRK07376 169 KGAADAAQKAFVVNRVGDFGLLLGI---LGLFWATGSFDFDGIADRLSELVSSgavsgwlalllciLVFLGPMAKSAQFP 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 199 FSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAFSG--DLLKFLLVLSMMTMFMAGLGANFEYDLKKIIALSTLS 276
Cdd:PRK07376 246 LHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQfpAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTIS 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 277 QLGLMISILCLGSHDLAFFHLLTHALFKALLFMCAGAIIHSLGN--------CQDIRYMGGLVSSMPLTCAYFNICNFAL 348
Cdd:PRK07376 326 QLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAI 405
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1999117240 349 CGLPFLSGFYSKDLIVESMSMGylNMFVYVVFYLSVGLTACYSFRLVYYCFTGEF 403
Cdd:PRK07376 406 SGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMYFLTFEGEF 458
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
43-400 |
6.46e-55 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 200.27 E-value: 6.46e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 43 NSVSLVFTVLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVS 122
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 123 YALVIyyQNVKSSNAG-MLTALTNRIGDVALLMSIAWMLN-FGSWNYVFYLEFP----KDGYLGIVATFVVLAAITKSAQ 196
Cdd:PRK12650 147 FFLIA--RSGSGGEAGsIRTLILTFFGGLTLLAAVAIAATqTGTTSLSGILHSDvwaeKPGLTTVVAVLIAVAAFTKSAQ 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 197 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAFSGDLL--KFLLVLSMMTMFMAGLGANFEYDLKKIIALST 274
Cdd:PRK12650 225 FPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVwnWLLIIVGMITALMGAVFAVQKTDLKKLTAYST 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 275 LSQLGLMISILCLGSH---DLAFFHLLTHALFKALLFMCAGAIIHSLGNcQDIRYMGGLVSSMPLTCAYFNICNFALCGL 351
Cdd:PRK12650 305 VSQLGWIVATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDHQAGT-RDIRRLGSLWRRMPFTFVSVTIAALSMAAV 383
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1999117240 352 PFLSGFYSKDLIVESMSMGYLNMFVYVVFYLSVGLTA----CYSFRLVYYCFT 400
Cdd:PRK12650 384 PPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAvftfAYSARLVLGAFV 436
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
105-380 |
2.47e-52 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 180.59 E-value: 2.47e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 105 SPNLVSILLGWDGLGLVSYALVIYY-QNVKSSNAGMLTALTNRIGDVALLMSIAWMLNFGSWNYVFYLEFPKDGYLG--- 180
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 181 --IVATFVVLAAITKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFN---AAFSGDLLKFLLVLSMMTMF 254
Cdd:pfam00361 81 llLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSllyLPSSPFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 255 MAGLGANFEYDLKKIIALSTLSQLGLMISILCLG---SHDLAFFHLLTHALFKALLFMCAGAIIHSLGNCQDIRYMGGLV 331
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1999117240 332 SSMPLTCAYFNICNFALCGLPFLSGFYSKDLIVE-SMSMGYLNMFVYVVF 380
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAaAVAASWIFLVLAGVV 289
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
44-399 |
2.23e-49 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 183.97 E-value: 2.23e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 44 SVSLVFTVLLDWMSLLFMSFVLFISAVVINYSEEYMM-GDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVS 122
Cdd:PRK12644 63 SLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDdDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLS 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 123 YALVIYYQNVKSSNAGMLTALT-NRIGDVALLMSIAWMLNF-GSWNYVFYLEFPKDGYLGIVATFVVLA-AITKSAQIPF 199
Cdd:PRK12644 143 FLLIGHYAERAASRRAALQALLvTTAGGLAMLVGIIILGQAaGTYRLSELLADPPTGPAVSVAVVLILVgALSKSAIVPF 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 200 SSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAFSgDLLKF---LLVLSMMTMFMAGLGANFEYDLKKIIALSTLS 276
Cdd:PRK12644 223 HFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFA-DVPVWrptVLVLGLATMLLGGWRALRQHDLKLILAYGTVS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 277 QLGLMISILCLGSHDLAFFHL---LTHALFKALLFMCAGAIIHSLGNcQDIRYMGGLVSSMPLTCAYFNICNFALCGLPF 353
Cdd:PRK12644 302 QLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHSTGT-RDIRKLSGLGRRQPVLAVVAALAAASMAGLPP 380
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1999117240 354 LSGFYSKDLIVESM----SMGYLNMFVYVVFYLSVGLTACYSFRLVYYCF 399
Cdd:PRK12644 381 LLGFVAKEAALEAVlhdgALGPAGPVVLAGIVLGSILTVAYSLRFLWGAF 430
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
49-397 |
3.25e-48 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 173.41 E-value: 3.25e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 49 FTVLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALVIY 128
Cdd:COG0651 70 IVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVAL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 129 YQNVKSSNAGMLTALTNRIGDVALLMSIAWM-LNFGSWNYV---FYLEFPKDGYLGIVATFVVLAAITKSAQIPFSSWLP 204
Cdd:COG0651 150 GGTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMAdlaARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 205 AAMA-APTPVSALVhSSTLVTAGVYLLIR-----FNAAFSGDLLKFLLVLSMMTMFMAGLGANFEYDLKKIIALSTLSQL 278
Cdd:COG0651 230 DAYPaAPSPVSALL-SGLLTKVGVYAILRvltllFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQI 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 279 GLMISILCLGSHDL---AFFHLLTHALFKALLFMCAGAIIHSLGNcQDIRYMGGLVSSMPLTCAYFNICNFALCGLPFLS 355
Cdd:COG0651 309 GYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERATGT-RDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLS 387
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1999117240 356 GFYSKDLIVESMsMGYLNMFVYVVFYLSVGLTACYSFRLVYY 397
Cdd:COG0651 388 GFVSKWLLLQAA-LEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
44-402 |
3.97e-48 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 178.96 E-value: 3.97e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 44 SVSLVFTVLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSY 123
Cdd:PRK12647 53 SLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSF 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 124 ALVIYYQNVKSSNAGMLTAL-TNRIGDVALL------------MSIAWMLNFGswnyvfylEFPKDGYLGIVATFVVLA- 189
Cdd:PRK12647 133 LLIGFNHEREAARRAALQALlVTGGGGLALLaglillgnvtgtYSLSELLASG--------DVIREHPLYLAILLLVLGg 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 190 AITKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAFSGDLLKF--LLVLSMMTMFMAGLGANFEYDLK 267
Cdd:PRK12647 205 AFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQtiLPLFGGLTMLTGALLAVRQTDLK 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 268 KIIALSTLSQLGLMISILCLGSHDL---AFFHLLTHALFKALLFMCAGAIIHSLGnCQDIRYMGGLVSSMPLTCAYFNIC 344
Cdd:PRK12647 285 LILAYSTVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVAGIIDHETG-TRDITKLGGLRRAMPITAAAALLA 363
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1999117240 345 NFALCGLPFLSGFYSKDLIVES-MSMGYLNMFVYVVFYLSVGLTACYSFRLVYYCFTGE 402
Cdd:PRK12647 364 ALSMAGLPPLFGFLAKELIYEAlLEAPLWSLILTVAAVLGNALMVAVAFLVGIKPFLGK 422
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
31-394 |
7.76e-48 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 174.68 E-value: 7.76e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 31 LSYLLEFNILSLNSVSLVFTVLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVS 110
Cdd:MTH00063 21 VSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLS 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 111 ILLGWDGLGLVSYALVIYYQNVKSSNAGMLTALTNRIGDVALLMSIAWMLNFGSWNYVFYLefpkdgylgivatFVVLAA 190
Cdd:MTH00063 101 TLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGSFLCCL-------------FFFLIV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 191 ITKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNA-AFSGDLLKFLLVLSMMTMFMAGLGANFEYDLKKI 269
Cdd:MTH00063 168 FTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYlLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKI 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 270 IALSTLSQLGLMISILCLGSHDLAFFHLLTHALFKALLFMCAGAIIHSLGNCQDIRYMGGLVSSMPLTCAYFNICNFALC 349
Cdd:MTH00063 248 VALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSILYGSWNLFYLFLLVLGLS 327
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1999117240 350 GLPFLSGFYSKDLIVESMSMGYLNMFVYVVFYLSVGLTACYSFRL 394
Cdd:MTH00063 328 GVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRL 372
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
44-442 |
2.12e-47 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 177.35 E-value: 2.12e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 44 SVSLVFTVLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSY 123
Cdd:TIGR00940 64 ELGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSF 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 124 ALVIYY-QNVKSSNAGMLTALTNRIGDVALLMSIAWM-LNFGSWNYVFYLE----FPKDGYLGIVATFVVLAAITKSAQI 197
Cdd:TIGR00940 144 LLISYWhHRAHSRYGAQKSLTITVFGGLAMLGGLILLgKITGSFSIDAVIAsadaIRNSPLFGTAMVLVLLGAFTKSAQF 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 198 PFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAFSGDLLKFLLV--LSMMTMFMAGLGANFEYDLKKIIALSTL 275
Cdd:TIGR00940 224 PFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVglAGLITLLWGSYFAIFQQDLKGILAFSTI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 276 SQLGLMISILCLGSHDL----------------AFFHLLTHALFKALLFMCAGAIIHSLGNcQDIRYMGGLVSSMPLTCA 339
Cdd:TIGR00940 304 SQLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHETGT-RDIRKLGGLFHIMPITFT 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 340 YFNICNFALCGLPFLSGFYSKDL----IVESMSMGYLNM------FVYVVFYLSVgLTACYSFRLVYYCFTGEFNLLSSH 409
Cdd:TIGR00940 383 LAMIASAAMAGVPPFNGFLSKEMffaeAITAHLVNPFDTvtlgylFPYVATVASV-FTFVYSLRFIHGVFFGRPKPEDLP 461
|
410 420 430
....*....|....*....|....*....|...
gi 1999117240 410 GLSDEPgpmleSMGILIFMVIFGGSLLMWLMFP 442
Cdd:TIGR00940 462 RKPHEP-----PRWMLASPDILVLLVLVFGLFP 489
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-401 |
5.99e-46 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 173.84 E-value: 5.99e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 47 LVFTVLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALV 126
Cdd:PRK12648 68 LNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 127 IYYQNVKSSNAGMLTALT-------NRIGDVALLMSIAwmlnfGSWNYVFYL---EFPKDGYLGIVA-TFVVLAAITKSA 195
Cdd:PRK12648 148 GYWHHRADARRGARMALTvtgagglALLAGVLLLGHIV-----GSYDLDVVLaagDLIRAHPLYPPAlVLILLGAFTKSA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 196 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAFSGDLLKFLLVLS--MMTMFMAGLGANFEYDLKKIIALS 273
Cdd:PRK12648 223 QFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGagLITLLLGAYFALFQHDLKGLLAYS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 274 TLSQLGLMISILCLGShDLA----FFHLLTHALFKALLFMCAGAIIHSLGNcQDIRYMGGLVSSMPLTCAYFNICNFALC 349
Cdd:PRK12648 303 TISHLGLITLLLGLGS-PLAavaaIFHIINHATFKASLFMAAGIIDHETGT-RDMRRLSGLRRLMPITATLAMVAAAAMA 380
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1999117240 350 GLPFLSGFYSKDL----IVESMSMGYLNMFVYVVFYLSVGLTACYSFRLVYYCFTG 401
Cdd:PRK12648 381 GVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLRFIHDVFFG 436
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
49-403 |
7.35e-43 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 163.94 E-value: 7.35e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 49 FTVLLDWMSLLFMSFVLFISAVVINYSEEYM-MGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALVI 127
Cdd:PRK12645 72 FTLYVDGLSLLFALLITGIGSLVVLYSIYYLsKKKEQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLIS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 128 YYQNVKSSNAGMLTALTNRI-GDVALL------------MSIAWMLNFGSwnyvfylEFPKDGYLGIVATFVVLAAITKS 194
Cdd:PRK12645 152 YWYEREASRYGAQKSMLITVfGGLSMLggfillyimtgsFSIREMIANAD-------EIQNSPLFIPAMILILLGAFTKS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 195 AQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAFSGDLLKFLLVLS--MMTMFMAGLGANFEYDLKKIIAL 272
Cdd:PRK12645 225 AQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLvgLITLFWGSLNAVKQTDLKGILAF 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 273 STLSQLGLMISILCLGSHDL----------------AFFHLLTHALFKALLFMCAGAIIHSLGNcQDIRYMGGLVSSMPL 336
Cdd:PRK12645 305 STVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMIVGIVDHETGT-RDIRKLGGLMTIMPI 383
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1999117240 337 TCAYFNICNFALCGLPFLSGFYSKDLIVESM---------SMGYLNMFVYVVFYLSVGLTACYSFRLVYYCFTGEF 403
Cdd:PRK12645 384 TFTIALIGALSMAGLPPFNGFLSKEMFFESMlnateanlfSLDTWGVLFPVIAWVASVFTFVYSIIFIFKTFFGKY 459
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
43-404 |
1.44e-42 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 162.75 E-value: 1.44e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 43 NSVSLVFTVLLDWMSLLfMSFVlfISAV---VINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLG 119
Cdd:CHL00025 79 NDFSLEFGYLIDPLTSI-MLIL--ITTVgilVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVG 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 120 LVSYALV-IYYQNVKSSNAGMLTALTNRIGDVALLMSIawmLNF----GSwnyvfyLEF-----------PKDG----YL 179
Cdd:CHL00025 156 MCSYLLIgFWFTRPIAANACQKAFVTNRVGDFGLLLGI---LGFywitGS------FEFrdlfeifnnliYNNEvnllFA 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 180 GIVATFVVLAAITKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRfnaafsgdLLKFLLVLSMMTMFMAGLG 259
Cdd:CHL00025 227 TLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR--------LLPLFIVIPYIMNLISLIG 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 260 ----------ANFEYDLKKIIALSTLSQLGLMISILCLGSHDLAFFHLLTHALFKALLFMCAGAIIHSLG--------NC 321
Cdd:CHL00025 299 iitallgatlALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEpivgyspdKS 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 322 QDIRYMGGLVSSMPLTCAYFNICNFALCGLPFLSGFYSKDLIVeSMSMGYLNMFVYVVfYLSVGLTACYSFRLVYYCFTG 401
Cdd:CHL00025 379 QNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL-NDSWLYSPIFAIIA-WSTAGLTAFYMFRIYLLTFEG 456
|
...
gi 1999117240 402 EFN 404
Cdd:CHL00025 457 HLR 459
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
37-430 |
8.11e-42 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 157.06 E-value: 8.11e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 37 FNILSLNSVSLvFTVLLDWMSLLFMSFVLFISAVVINYSEEYMM-------GDVNLTRFILLVVMFVLSMMLLIISPNLV 109
Cdd:PRK06525 58 LTLVNLGDVAL-FGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLL 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 110 SILLGWDGLGLVSYALVIYYQNVKSSNAGMLTALTNRIGDVALLMSIAWMLNFGSWNYVFYLEFPKDGYLGIVATFVVLA 189
Cdd:PRK06525 137 GLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKYLVFLGILFA 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 190 AITKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR---FNAAFSGDLLKFLLVLSMMTMFMAGLGANFEYDL 266
Cdd:PRK06525 217 AWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARaiqSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDM 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 267 KKIIALSTLSQLGLM---ISILCLGSH---DLAFFHLLTHALFKALLFMCAGAIIHSLGNcQDIRYMGGLVSSMPLTCAY 340
Cdd:PRK06525 297 KRLLAYSTITQLGYMffgLSLAILGSRlalEGSIAYIFNHAFAKSLFFLVAGALSYSCGT-RLLPRLRGVLKKLPLVGVG 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 341 FNICNFALCGLPFLSGFYSKDLIVES---MSMGYLNMFVYVVFYL--SVGlTACYSFRLVYYCFTGEFNLLSSHGlSDEP 415
Cdd:PRK06525 376 FCVAALAITGVPPFNGFFSKFPIFAAgfeLSVEYWILLPAMVLLLieSVA-SFAWFLRWFGRVVFGEPSEAVADA-APLP 453
|
410
....*....|....*
gi 1999117240 416 GPMLESMGILIFMVI 430
Cdd:PRK06525 454 GSMKLVLIVLIVMSL 468
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
42-433 |
8.61e-42 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 160.76 E-value: 8.61e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 42 LNSVSLVFTVLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLV 121
Cdd:PRK12649 67 LPSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSIT 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 122 SYALVIYYQNVKSSNAGMLTALTNRIGDvALLMSIAWML---NFGSWNYVFYLEFPK--------DGYLgIVATFVVLAA 190
Cdd:PRK12649 147 SFMLIGYWRHRPESVYGATKSLLITAGG-GLFMFAGFLLlhvITGTYDIATILQDSElienikghPLFL-ITLILIFIGA 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 191 ITKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAFSGDLLKFLLV--LSMMTMFMAGLGANFEYDLKK 268
Cdd:PRK12649 225 AAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVsgTGMITMVLAGFLAFRQTDIKA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 269 IIALSTLSQLGLMISILCLGSHD-------LAFFHLLTHALFKALLFMCAGAIIHSLGNcQDIRYMGGLVSSMPLTCAYF 341
Cdd:PRK12649 305 ILAYSTISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEAAT-RDIRKLGGLRKEMPITFIVA 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 342 NICNFALCGLPFLSGFYSKDLIVE-SMSMGYLNMFVYVVFYLSVG-----LTACYSFRLVYYCFTGE--FNLLSSHgLSD 413
Cdd:PRK12649 384 SIAALAMAGIPPLNGFLSKEMFYEtSVEMGALIGGPFTIIIPAVAvlggvFTFAYSIKLIDGIFLGErtHDHLPHH-IHE 462
|
410 420
....*....|....*....|
gi 1999117240 414 EPGPMLESMGILIFMVIFGG 433
Cdd:PRK12649 463 APYVMLIPAAFLAGLVILFG 482
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
35-404 |
7.17e-39 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 152.22 E-value: 7.17e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 35 LEFNILSLNSVSLVFTVLLDWMSLLFMSFVLFISAVVINYSEEYM-MGDVNLTRFILLVVMFVLSMMLLIISPNLVSILL 113
Cdd:PRK12646 58 LSTSIPWMKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLsSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYV 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 114 GWDGLGLVSYALVIYYQNVKSSNAGMLTA-LTNRIGDVALLMSIAWMLNFGSWNYVFYLEFPKDGY----LGIVATFVVL 188
Cdd:PRK12646 138 FWELTSVSSFLLISYWYNNGDSQFGAIQSfMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIknhgLFIPMIFMFL 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 189 -AAITKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNA--AFSGDLLKFLLVLSMMTMFMAGLGANFEYD 265
Cdd:PRK12646 218 lGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPllGLSNMYIYIVTFVGLITMLFGSITALKQWD 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 266 LKKIIALSTLSQLGLMISILCLG------SHD-----------LAFFHLLTHALFKALLFMCAGAIIHSLGNcQDIRYMG 328
Cdd:PRK12646 298 LKGILAYSTISQLGMIMAMVGIGggyaqhQQDaiasiyvfvlfAALFHLMNHAIFKCALFMGVGIIDHEAGT-RDIRILS 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 329 GLVSSMPLTCAYFNICNFALCGLPFLSGFYSKDLIVESMSMG-----YLNMFVYVVFYLSVG---LTACYSFRLVYYCFT 400
Cdd:PRK12646 377 GMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTgqlsqFSLISMIIIVFIGVIasiFTFTYALYMVKEVFW 456
|
....
gi 1999117240 401 GEFN 404
Cdd:PRK12646 457 GKYD 460
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-433 |
6.18e-37 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 143.48 E-value: 6.18e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 50 TVLLDWMSLLFMSFVLFISAVVINYSeeYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALVIYY 129
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 130 QNVKSSNAGMLTALTNRIGDVALLMSIAWM------LNFGSWNYVFylefPKDGYLGIVATFVVLAAITKSAQIPFSSWL 203
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLygvtgtLNMADLAGAL----AENPTVVTAFGFVLLALALKAAVFPLHTWL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 204 PAAMAAPTPVSALVHSSTLVTAGVYLLIRF-------NAAFSGDLLKFLLVLSMMTMFMAGLGANFEYDLKKIIALSTLS 276
Cdd:PRK08375 226 PRAYPAAPPVVTALLSGLVTKVAVYALIRIyftvfggDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 277 QLGLMISILCLGSHDL---AFFHLLTHALFKALLFMCAGAIIHSLGNcQDIRYMGGLVSSMPLTCAYFNICNFALCGLPF 353
Cdd:PRK08375 306 QMGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVTYGT-RRLSELSGLGRRMPLTAAAFAVASLSLIGVPP 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 354 LSGFYSKDLIVESmSMGYLNMFVYVVFYLSVGLTACYSFRLVYYCFTGEFNLLSSHGLSDEPGPMLESMGILIFMVIFGG 433
Cdd:PRK08375 385 TSGFVSKWYLVVG-AVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEAPKQEAPLGMLAPSLALALLSLLLG 463
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
390-571 |
5.83e-36 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 132.67 E-value: 5.83e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 390 YSFRLVYYCFTGEFNLLSSHGLSDEPGPMLESMGILIFMVIFGGSLLMWLMFPTPVFICLPFYMKVFALGLIFLGMWVGY 469
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 470 EASKFyLTDKPIGLLYHDFSSFSANMWNLTILSTFGVSPLPMHLGSVYLKGLDQGWLEYYGSQNLYKTLKGSSMFMQLLS 549
Cdd:pfam06455 81 ELSNL-SNKQLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170 180
....*....|....*....|..
gi 1999117240 550 RNHMKVFLMLTLFWLMFLFVSM 571
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLLLLI 181
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
45-366 |
1.29e-29 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 123.69 E-value: 1.29e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 45 VSLVFTVLLDWMSLLFMSFVLFISAVVINYSEEY---MMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLV 121
Cdd:PRK08667 67 PGLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 122 SYALVIY-YQNVKSSNAGMLTALTNRIGDVAL-LMSIAWMLNFGSWnyvfylEFPKDGYLGIVATFVVLAAI----TKSA 195
Cdd:PRK08667 147 SFFLVMNdYQEEETQRAGIFYFVMTQLSTVFLmLGIIVLFIQTGSF------ELSPLGASAGILSLVFLLLFlgfgIKAG 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 196 QIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFNAAFSGDLLKFLLVLSMMTMFMAGLGANF---EYDLKKIIA 271
Cdd:PRK08667 221 IIPFHKWLPYAHpASPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYalkEHDLKGLLA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 272 LST-------LSQLGLMISILCLGSHDLAF-------FHLLTHALFKALLFMCAGAIIHSLGNcQDIRYMGGLVSSMPLT 337
Cdd:PRK08667 300 YSSienigiiLMGIGLYVIFGVYGLDTLALlalggalFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYT 378
|
330 340
....*....|....*....|....*....
gi 1999117240 338 CAYFNICNFALCGLPFLSGFYSKDLIVES 366
Cdd:PRK08667 379 SALFLVGAVSIAALPPFNGFASELLLYES 407
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
47-366 |
7.27e-27 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 115.37 E-value: 7.27e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 47 LVFTVLLDWMSLLFMSFVLFISAVVINYSEEYM--MGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYA 124
Cdd:PRK06521 72 LPFHLRLDALSAFFLLVISLLGAAASLYSLGYFreYEGKGPGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWF 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 125 LVIYYQNVKSS-NAGMLTALTNRIGDVALLMSIaWMLNFGSWNYVF--YLEFPKDGYLGIVA-TFVVLAAITKSAQIPFS 200
Cdd:PRK06521 152 LVIANHREAEIrRAGFLYLLMAHAGALAILLAF-GLLARESGSYDFaaMRAAHLSPFWASLVfLLALFGFGAKAGLVPLH 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 201 SWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFNAAFSGDLLK----FLLVLSMMTMFMAGLGANFEYDLKKIIALSTL 275
Cdd:PRK06521 231 VWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWwwgvLVLALGAISAVLGVLYALAEHDLKRLLAYSTI 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 276 SQLGLM-----ISILCLGSHD-----LAF----FHLLTHALFKALLFMCAGAIIHSLGNcQDIRYMGGLVSSMPLTCAYF 341
Cdd:PRK06521 310 ENIGIIfvglgLAMVFIAYGMpllaaLALtaalYHLLNHALFKSLLFLGAGAVLHATGT-RDMEKLGGLIRRMPWTAWAF 388
|
330 340
....*....|....*....|....*
gi 1999117240 342 NICNFALCGLPFLSGFYSKDLIVES 366
Cdd:PRK06521 389 LIGCLAISALPPLNGFVSEWLLLQS 413
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
35-359 |
1.65e-25 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 110.77 E-value: 1.65e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 35 LEFNILSLNSVSLVFTVLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLG 114
Cdd:PRK07390 69 LSFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 115 WDGLGLVSYALVIYYQNVKSSNAGMLTA-LTNRIGDVALLMSIAWMLNF-GSWNYVFYLEFPKDGYL-GIVATFVVLAAI 191
Cdd:PRK07390 149 LEILTLSTYLLVGFWYAQPLVVTAARDAfLTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAATANLdPLTATLLGLALI 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 192 T----KSAQIPFSSWLPAAMAAPTPVSALvHSSTLVTAGVYLLIRFNA--AFSGDLLKFLLVLSMMTMFMAGLGANFEYD 265
Cdd:PRK07390 229 AgptgKCAQFPLHLWLDEAMEGPNPASIL-RNSVVVATGAWVLIKLQPvlALSPVALTVLIVIGTVTAIGASLVAIAQID 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 266 LKKIIALSTLSQLGLMISILCLGSHDLAFFHLLTHALFKALLFMCAGAIIHSlGNCQDIRYMGGLVSSMPLTCAYFNICN 345
Cdd:PRK07390 308 IKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGS 386
|
330
....*....|....
gi 1999117240 346 FALCGLPFLSGFYS 359
Cdd:PRK07390 387 AGLVALLPLGGFWA 400
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
45-433 |
2.26e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 109.80 E-value: 2.26e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 45 VSLVFTVllDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYA 124
Cdd:PRK08376 82 IRIIWEV--DLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYA 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 125 LVIYYQNV-KSSNAGMLTALTNRIGDVALLMSIAwmLNFGSWN-----YVFYLEFPKDGYLGIVA-TFVVLAAITKSAQI 197
Cdd:PRK08376 160 LVAFRNDTwEAIEAGIKYMFVGSLASSMVLLGIA--LLYGQYGtlnmaYLAVKMSENPTVVAKIAlALFIAGLAMKSGAV 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 198 PFSSWLPAAM-AAPTPVSALVHSSTLvtAGVYLLIRFNAAFSGDLLK------FLLVLSMMTMFMAGLGANFEYDLKKII 270
Cdd:PRK08376 238 PVHMWLPDAYpAAPSSISAMLLVIKQ--AGLYALARVLFSIYGPAINlatvgwVIIILGCLTMFVGVAMAVVQKDVKRLL 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 271 ALSTLSQ-----LGLMISILCLGSHDL----------AFFHLLTHALFKALLFMCAGAIIHSLGNcQDIRYMGGLVSSMP 335
Cdd:PRK08376 316 AYHSVSQigymlLGLGVGLAALGDPAMasygeialagGIYHIVNHALYKALLFLTAGAVIYETGT-RNLNELGGLARTMP 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 336 LTCAYFNICNFALCGLPFLSGFYSKDLIVESMSMgyLNMFVYVVFYLSVGLTACYSFRLVYYCFTGEfNLLSSHGLSDEP 415
Cdd:PRK08376 395 KTTIAFLIGAAAIVGLPPFNGFASKWLIYESSAL--FNPILGVIAMIGSVLTLASFVKVFHTAFFGP-PSEKVMNVKEPP 471
|
410
....*....|....*...
gi 1999117240 416 GPMLESMGILIFMVIFGG 433
Cdd:PRK08376 472 KPMLVPMLILAIAIIGMG 489
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
56-312 |
7.50e-25 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 108.25 E-value: 7.50e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 56 MSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALVIYYQNVKss 135
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP-- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 136 nAGMLTA----LTNRIGDVALLMSIA-WMLNFGSWN----YVFYLEFPKDGYLGIVATFVVLAAITKSAQIPFSSWLPAA 206
Cdd:PRK08168 148 -FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLSlsalWAHLAAQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQV 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 207 MAAPTPVSALVHSStLVTAGVYLLIRF----NAAFSGDLLkfLLVLSMMTMFMAGLGANFEYDLKKIIALSTLSQLGLMI 282
Cdd:PRK08168 227 MEAPTPVSALLHAG-VVNLGGFVLIRFapllEQAPPARWL--LVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFML 303
|
250 260 270
....*....|....*....|....*....|
gi 1999117240 283 SILCLGSHDLAFFHLLTHALFKALLFMCAG 312
Cdd:PRK08168 304 LECGLGLYELALLHLVAHSLYKAHAFLSAS 333
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
108-451 |
8.58e-25 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 108.44 E-value: 8.58e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 108 LVSILLGWDGLGLVSYALVIYYQNVKSSNAGMLTALTNRIGDVALLMSIAW-MLNFGSWNYVfylefPKDGYLGIVATFV 186
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLhYAETGSFAFG-----AIAGLGGTAAWLI 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 187 VLAAITKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRfnaAFSG-DLLKFLLVLsmMTMFMAGLgANFEYD 265
Cdd:PRK12668 190 LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR---AFPGtELLIYIGAA--MAVYGVFF-ALLEND 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 266 LKKIIALSTLSQLGLMISILCLGSH---DLAFFHLLTHALFKALLFMCAGAIIHSLGNcQDIRYMGGLVSSMPLTCAYFN 342
Cdd:PRK12668 264 LRRLLSYHIVSQVGYMVAGIGIGTAlaiNGAVAHAFNHILYKGLLFMSAGAVLYRTGT-EKLTELGGLYRSMPLTALFCL 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 343 ICNFALCGLPFLSGFYSKDLIVESMSMGYLNMFVYVVFYLSVGLTACYSFRLVYYCFtgeFNLLSSHGLSDEPGPMLESM 422
Cdd:PRK12668 343 VGALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLLLLLASAGTFLHFGIKLPYFAF---FGGDSGLRVKDAPRNMLVAM 419
|
330 340
....*....|....*....|....*....
gi 1999117240 423 GILIFMVIFGGsllmwlMFPTPVFICLPF 451
Cdd:PRK12668 420 GIAAFLCIAIG------VYPQALYALLPY 442
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
53-399 |
3.90e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 106.05 E-value: 3.90e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 53 LDWMSLLFMSFVLFISAVVINYSEEYMMGDV--NLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALVIYYQ 130
Cdd:PRK06589 81 LEPLGLIFLLLIGFLWICALLYTPKYLAINNidSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTR 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 131 NVKSSNAGM--LTALTNRIGDVALLMSIAWMLNFGSWNYVFYLEFPKDGYLGIVATFVVLaaITKSAQIPFSSWLPAAMA 208
Cdd:PRK06589 161 NNISLSGGYkyLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYG--IAKTAIFPVHSWLPAAMV 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 209 APTPVSALVHSSTLVTAGVYLLIR-----FNAAFSGDLLK---FLLVLSMMTMFMAGLGANFEYDLKKIIALSTLSQLGL 280
Cdd:PRK06589 239 AHYPVSALLHAVIVVKTGLFCIYKillyiFGLSYLQRIFAefnWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSL 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 281 MI---SILCLGSHDLAFFHLLTHALFKALLFMCAGAIIhSLGNCQDIRYMGGLVSSMPLTCAYFNICNFALCGLPFLSGF 357
Cdd:PRK06589 319 ALlsaFILTPKALGAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGF 397
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1999117240 358 YSKDLIVESMS---MGYLNMFVYVVFYLSVGLTACYSFRLVYYCF 399
Cdd:PRK06589 398 ISKFLILLAASeqnQPWLSIIVMLVVIASSILSALYLLKILSSIY 442
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
63-432 |
1.30e-22 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 102.00 E-value: 1.30e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 63 FVLFISAVVINYSEEYMM--GDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYaLVIYYQNVKSSNAGML 140
Cdd:PRK08668 73 FFAMISLLVIFSVAFFMVseKTKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLK 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 141 TALTNRIGDVALLMSIAWMLN-FGSWNYV----FYLEFPKDGYLGIVATFVVLAAITKSAQIPFSSWLPAAMA-APTPVS 214
Cdd:PRK08668 152 YFVLSAIGAYAMLYAIFLIYAkTGTFDFAdisqGLINDTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSeAPQSFS 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 215 AlVHSSTLVTAGVYLLIRFNAAFSG-----DLLKF---------LLVLSMMTMFMAGLGANFEYDLKKIIALSTLSQLG- 279
Cdd:PRK08668 232 A-VLSGQLSKLGAYGFLLVLYVLPGtklfsEFGTYrgvplfnyiLAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGy 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 280 LMISILCLGSHDLA--FFHLLTHALFKALLFMCAGAIIHSLGNcQDIRYMGGLVSSMPLTCAYFNICNFALCGLPFLSGF 357
Cdd:PRK08668 311 ILVGLGLGTSLGFAggLFHVFNHALFKGLFFLIFAAVIYRTGT-TKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGF 389
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1999117240 358 YSKDLIVESMSMGYLNMFVYVVFYLSVGLTAcYSFRLVYYCFTGEfnLLSSH-GLSDEPGPMLESMGIL-IFMVIFG 432
Cdd:PRK08668 390 ASKWLIFEALISKGMPITAFMAFFGSIGSFL-YVFRPLAGVFLGQ--LPSDHkDVKEAPLPMLIPMAILvLLNVVFG 463
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
53-402 |
4.42e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 99.66 E-value: 4.42e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 53 LDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALVIYYQNV 132
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDR 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 133 KSS-NAGMLTALTNRIGDVALLMSIAWMLN-FGSWN----------YVFYLEFPKDGYLGIVATFVVLAAI----TKSAQ 196
Cdd:PRK12667 160 GDAvEAAIKYALIGAVGTTLYFLALAFLYAtFGTLNmadlsakirgLSFPLTGGLAGNPPLALGVALALALwaftIKAAI 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 197 IPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRF----------NAAFSGDLLKFLLVLSMMTMFMAGLGANFEYD 265
Cdd:PRK12667 240 FPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgispsLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 266 LKKIIALSTLSQLGLMISILCLGSH---DLAFFHLLTHALFKALLFMCAGAIIHSLGNcQDIRYMGGLVSSMPLTCAYFN 342
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAAGT-RDIDELAGLGRKMPIASFAFL 397
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 343 ICNFALCGLPFLSGFYSKDLIVESMSMGYLNMFVYVVFYLSVgLTACYSFRLVYYCFTGE 402
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASA-ISLVGYFRAWYSLFFGK 456
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
60-446 |
1.17e-21 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 98.30 E-value: 1.17e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 60 FMSFVLFISAVVINYSEEYMMGDVN---LTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALVIYYQNVKSSN 136
Cdd:PRK08377 79 FAALFVLIIAIVSFIMSIFSLKAVEvepIDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAE 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 137 AGMLTALTNRIGDVALLMSIAWMLN-FGSWNYVFYLEFPK--DGYLGIVA-TFVVLAAITKSAQIPFSSWLPAA-MAAPT 211
Cdd:PRK08377 159 ASMKYIVLGGIGSSFFLIGVALIYGaTGTLNMAHIAQLAGtiDPTVAQVGlALLIFGLAVEAELFPLNAWAPDAyQAAPH 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 212 PVSALVhSSTLVTAGVYLLIR-----FNAAFSGDLLKFLLVLSMMTMFMAGLGANFEYDLKKIIALSTLSQLGLMISILC 286
Cdd:PRK08377 239 PITVMF-SAFVVKAGLYAMARilylmQNANGWSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALA 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 287 LGSH---DLAFFHLLTHALFKALLFMCAGAIIHSLGNCQdIRYMGGLVSSMPLTCAYFNICNFALCGLPFLSGFYSK-DL 362
Cdd:PRK08377 318 LGTQagvDAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKfRI 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 363 IVESMSMGYLNMFVYVVFYLSVglTACYSFRLVYYCFTGEFNllsshglsdepGPMLESMGILIFMVIFGGSLLMWLMFP 442
Cdd:PRK08377 397 ILAGLSAGYTWPVALVLGASVV--EAVYYFRLIHTMWFKGEG-----------ERIRENAAIGIILLLLAALIVVIGIYP 463
|
....
gi 1999117240 443 TPVF 446
Cdd:PRK08377 464 TPFW 467
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
53-315 |
6.20e-21 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 96.26 E-value: 6.20e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 53 LDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWdGLGLVSYALVIyyqNV 132
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCW-GATLLGLTLLI---GL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 133 KS-----SNAGMLTALTNRIGDVALLMSIAWM-LNFGSWNYVFYLEFPKDGYLG-----IVATFVVLAAITKSAQIPFSS 201
Cdd:PRK08601 146 NKgwkvaREAAKISGMLFLISWLALALAIVWLfIATGEWQLTSVLSNENLAQLGtwektGINLLLILAVMIPAAQWPFQR 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 202 WLPAAMAAPTPVSALVHSStLVTAGVYLLIRFNAAFSGDLLKFLLVLSMMTMFMAGLGANF-EYDLKKIIALSTLSQLGL 280
Cdd:PRK08601 226 WLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASISVLIGTGISLvQVDYKRQLVGSTMAQMGF 304
|
250 260 270
....*....|....*....|....*....|....*
gi 1999117240 281 MISILCLGSHDLAFFHLLTHALFKALLFMCAGAII 315
Cdd:PRK08601 305 MLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
198-446 |
2.18e-20 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 94.38 E-value: 2.18e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 198 PFSSWLP-AAMAAPTPVSALvHSSTLVTAGVYLLIRFNAAF----SGDLLKFLLVLSMMTMFMAGLGANFEYDLKKIIAL 272
Cdd:COG1008 227 PFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFALPLfpeaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 273 STLSQLGLM-ISILCLGSHDL--AFFHLLTHALFKALLFMCAGAIIHSLGNcQDIRYMGGLVSSMPLTCAYFNICNFALC 349
Cdd:COG1008 306 SSVSHMGFVlLGIFALNPLGLqgAVLQMVSHGLITAALFLLVGVLYDRTHT-RDIADLGGLAKRMPVLAALFLLAALASL 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 350 GLPFLSGFYSKDLIVESMsmgYLNMFVYVVF-YLSVGLTACYSFRLVYYCFTGEFNlLSSHGLSDEPGPMLESMGILIFM 428
Cdd:COG1008 385 GLPGTSGFVGEFLVLLGA---FQVNPWLAILaALGLILTAAYLLWMYQRVFFGPLK-EELAELPDLNPRELAVLAPLAAL 460
|
250
....*....|....*...
gi 1999117240 429 VIFGGsllmwlMFPTPVF 446
Cdd:COG1008 461 ILLLG------LYPQPLL 472
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
50-446 |
1.17e-19 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 92.10 E-value: 1.17e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 50 TVLLDWMSLLFMSFVLFISAVVINYSEEYM-MGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALV-I 127
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLeRRGLLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaF 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 128 YYQNVKSSNAGMLTALTNRIGDVALLMSIAWM------LNFGSWNYVFYLEFPKDGYLGIVATFVVLAAITKSAQIPFSS 201
Cdd:COG1007 145 RRDDRRSSEAALKYFLLGALSSGFLLYGISLLygatgsLNLAGIAAALAAGGANSPLLLLGLVLVLAGLAFKLSAVPFHM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 202 WLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIRF----NAAFSGDLLKFLLVLSMMTMFMAGLGANFEYDLKKIIALSTL 275
Cdd:COG1007 225 WTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLlveaFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 276 SQLG-LMISILCLGSHDL--AFFHLLTHALFKALLFMCAGAIIHSLGNCQDIRYMGGLVSSMPLTCAYFNICNFALCGLP 352
Cdd:COG1007 303 AHAGyLLLGLAAGTPLGVsaALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIP 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 353 FLSGFYSKDLIVES-MSMGYLNMFVYVVfyLSVGLTACYSFRLVYYCFTGEfnllsshglSDEPGPMLESMGILIFMVIF 431
Cdd:COG1007 383 PTAGFFGKFYVFSAaVEAGLYWLAVIAV--LNSVISAYYYLRVVKAMYFDE---------PEEEAPISAPPGLRVALVIA 451
|
410
....*....|....*
gi 1999117240 432 GGSLLMWLMFPTPVF 446
Cdd:COG1007 452 ALLVLLLGIFPGPLL 466
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
192-396 |
1.00e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 89.24 E-value: 1.00e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 192 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFnAAFSGDLLKFLLVLSMMTMFMAGLGANFEYDLKKIIA 271
Cdd:PRK07234 196 VKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRC-ALDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 272 LSTLSQLGLMISilclgSHDLAFFHLLTHALFKALLFMCAGAiIHSLGNCQDIRYMGGLVSSMPLTCAyfnicNFALCGL 351
Cdd:PRK07234 275 FSTISQLGFILA-----APLVGGLYALAHGLVKSTLFLCAGA-LPSRNFTELISQMLGIGKWIPLTMA-----SFSIAGF 343
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1999117240 352 PFLSGFYSKDLivesmSMGYLNMFVYVVFYLSVGLTACYSFRLVY 396
Cdd:PRK07234 344 PLLAGFVSKVL-----TLKNLLPWQAIALNLAAVGTAASFWKFIF 383
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
150-402 |
6.61e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 80.38 E-value: 6.61e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 150 VALLMSIAWMLNFGSW-NYVFYLEFPKDGYLGIVATFVVLAAITKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGV 227
Cdd:PRK07691 178 VAILYSVVGTLNMADIsVKIAELSAGQTGLITVVAILFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGV 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 228 YLLIR-FNAAFSGDL---LKFLLVLSMMTMFMAGLGANFEYDLKKIIALSTLSQLGLMISILCLGSHDL---AFFHLLTH 300
Cdd:PRK07691 257 YAIARtFTLFFSHDTsftHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHD 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 301 ALFKALLFMCAGAIIHSLGNcQDIRYMGGLVSSMPLTCAYFNICNFALCGLPFLSGFYSKDLIVES-MSMGYlnmFVYVV 379
Cdd:PRK07691 337 MIVKAALFLLIGIMIKITGT-TDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGtFEAGF---YVSGI 412
|
250 260
....*....|....*....|....
gi 1999117240 380 FYLSVGLTACYS-FRLVYYCFTGE 402
Cdd:PRK07691 413 IVLLSSLLVLYSvIKIFLKGFWGE 436
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
179-436 |
8.69e-15 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 76.91 E-value: 8.69e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 179 LGIVATFVVLAAITKSAQIPFSsWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAF----SGDLLKFLLVLSMMTMF 254
Cdd:PRK12663 206 LTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqeRELLHPLLATMAAITMV 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 255 MAGLGANFEYDLKKIIALSTLSQLGLMISILCLGSHDL---AFFHLLTHALFKALLFMCAGAIIHsLGNCQDIRYMGGLV 331
Cdd:PRK12663 285 IGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLY 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 332 SSMPLTCAYFNICNFALCGLPFLSGFYSKDLIVE-SMSMGYlnmFVYVVFYLSVGLTACYS-FRLVYYCFTGE------- 402
Cdd:PRK12663 364 RKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQgALDNGA---YILLALMLITSLITMYSlFRIFFLAYWGDkdgeevn 440
|
250 260 270
....*....|....*....|....*....|....
gi 1999117240 403 FNLLSSHGLsdepGPMLESMGILIFMVIFGGSLL 436
Cdd:PRK12663 441 FKPIPLYRK----LPLSILAVVVIAMGIAAEPLL 470
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
50-360 |
2.15e-14 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 75.63 E-value: 2.15e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 50 TVLLDWMSLLFMSFVLFISAVVINYSEEYMmGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALVIY- 128
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYL-EDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 129 YQNVKSSNAGMLTALTNRIGDVALLMSIAWM------LNFGSWNYVFYLEFPKDGYLGIVATFVVLAAITKSAQIPFSSW 202
Cdd:PRK05777 147 RDRRRSLEAAIKYFVLGALASGFLLYGMSLLygatgsLSFAGIAKALADGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMW 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 203 LPAAM-AAPTPVSALVHSSTLVtAGVYLLIR-FNAAFSG---DLLKFLLVLSMMTMFMAGLGANFEYDLKKIIALSTLSQ 277
Cdd:PRK05777 227 TPDVYeGAPTPVTAFLATAPKI-AAFAVLLRlLVVAFGGlseDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAH 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 278 LG-LMISILCLGSHDL--AFFHLLTHALFKALLFMCAGAIIHSLGNCQDIRYMGGLVSSMPLTCAYFNICNFALCGLPFL 354
Cdd:PRK05777 306 AGyLLVGLAAGTAEGYsaVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPT 385
|
....*.
gi 1999117240 355 SGFYSK 360
Cdd:PRK05777 386 AGFWGK 391
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
171-386 |
1.25e-13 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 73.71 E-value: 1.25e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 171 LEFPKDGYLGIVATFVVLAAItksaqIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNAAFSGDLLKF---LL 246
Cdd:PRK08042 176 LPLGSDIWLLGVIGFGLLAGI-----IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSLLGGNAPLWWgvaLL 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 247 VLSMMTMFMAGLGANFEYDLKKIIALSTLSQLGLMISILCLGSHDLA--------------FFHLLTHALFKALLFMCAG 312
Cdd:PRK08042 250 VLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAG 329
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1999117240 313 AIIHSLGNcQDIRYMGGLVSSMPLTCAYFNICNFALCGLPFLSGFYSKDLIVES-MSMGYLNMFVYVVF--YLSVGL 386
Cdd:PRK08042 330 SVWFRTGH-RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSfFKLSNSGAFVARLLgpLLAVGL 405
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
178-433 |
3.30e-13 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 71.89 E-value: 3.30e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 178 YLGIVATFVVlaaitKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNAAF----SGDLLKFLLVLSMMT 252
Cdd:TIGR01972 206 FLAFFIAFAV-----KVPLFPLHTWLPDAHVeAPTAGSVIL-AGVLLKMGTYGFLRFNLPLfpdaSLYFAPVLAALGVIA 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 253 MFMAGLGANFEYDLKKIIALSTLSQLGL-MISILCLGSHDL--AFFHLLTHALFKALLFMCAGAIIHSLGNcQDIRYMGG 329
Cdd:TIGR01972 280 IIYGALIALAQTDIKRLIAYSSISHMGFvLLGIFSFNELGIsgAVFQMISHGLITAALFLLVGVLYERAHT-RDIAKYGG 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 330 LVSSMPLTCAYFNICNFALCGLPFLSGFYSKDLIVesmsMGYLNMFVYVVFY--LSVGLTACYSFRLVYYCFTGEFNLLS 407
Cdd:TIGR01972 359 LANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLIL----LGSFKVNPVVAFLaaLGIVLAAAYMLTLYKRVFFGELSNPE 434
|
250 260
....*....|....*....|....*.
gi 1999117240 408 SHGLSDEPGPMLESMGILIFMVIFGG 433
Cdd:TIGR01972 435 VAEFPDLNGREIAVLAPLVVLILFLG 460
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
197-446 |
2.18e-12 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 69.46 E-value: 2.18e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 197 IPFSSWLPAAMA-APTPVSALvHSSTLVTAGVYLLIRFN----AAFSGDLLKFLLVLSMMTMFMAGLGANFEYDLKKIIA 271
Cdd:PRK05846 228 FPLHTWLPDAHVqAPTAGSVL-LAGILLKMGAYGLLRFSlplfPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIA 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 272 LSTLSQLG-LMISILCLGSHDL--AFFHLLTHALFKALLFMCAGAIIHSLGNcQDIRYMGGLVSSMPLTCAYFNICNFAL 348
Cdd:PRK05846 307 YSSISHMGfVTLGIFAGNQLGIqgAIFQMISHGLSSAALFLLVGVLYDRLHT-RDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 349 CGLPFLSGFYSKDLIVesmsMGYLNMFVYVVFYLSVG--LTACYSFRLVYYCFTGEFNlLSSHGLSDEPGPMLESMGILI 426
Cdd:PRK05846 386 LGLPGTSGFVGEFLIL----LGSFQVNPVIAFIATTGliLAAVYSLWLYQRVMFGPVK-NEVAKLKDLNGRELLILLPLV 460
|
250 260
....*....|....*....|
gi 1999117240 427 FMVIFGGsllmwlMFPTPVF 446
Cdd:PRK05846 461 ALLLLLG------VYPKPLL 474
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-433 |
4.13e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 68.61 E-value: 4.13e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 185 FVVLAAITKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR-FNAAFSGDLLKFLLVLSMMTMFMAGLG---- 259
Cdd:PRK12662 214 FIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRiVYDVFKANFVFTTLPFNNVFMILAALAivfg 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 260 ---ANFEYDLKKIIALSTLSQLGLMISILCLGSHD---LAFFHLLTHALFKALLFMCAGAIIHSLGNCqDIRYMGGLVSS 333
Cdd:PRK12662 294 svlAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFGTT-KLEDCLNLWKS 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 334 MPLTCAYFNICNFALCGLPFLSGFYSKDLIVESM--SMGYLNMFVYVVfylSVGLTACYSFRLV-YYCFTGEFNLLSSHG 410
Cdd:PRK12662 373 MPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFikSNAWIGLVVLLV---GSGLSVIYVWKIVeALYFESRMVESKAND 449
|
250 260
....*....|....*....|....
gi 1999117240 411 -LSDEPGPMLESMGILIFMVIFGG 433
Cdd:PRK12662 450 kAFKTPNAMVLCIWIMAILSIIVG 473
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
193-360 |
5.29e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 68.46 E-value: 5.29e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 193 KSAQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFNAA-FSGDLL-KFLLVLSMMTMFMAGLGANFEYDLKKI 269
Cdd:PRK12665 222 KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLlFPGGGLdTLLMVVALLTMVVGILGAIAQSDIKRL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 270 IALSTLSQLGLMISILCLGS-HDL--AFFHLLTHALFKALLFMCAGaIIHSLGNCQDIRYMGGLVSSMPLTCAYFNICNF 346
Cdd:PRK12665 301 LSFTLVSHIGYMVFGIALSTvAGLsgAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPAL 379
|
170
....*....|....
gi 1999117240 347 ALCGLPFLSGFYSK 360
Cdd:PRK12665 380 NLGGIPPFSGFIGK 393
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
192-388 |
8.89e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 67.65 E-value: 8.89e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 192 TKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNAAFSGDLLK-----FLLVLSMMTMFMAGLGANFEYD 265
Cdd:PRK06458 226 TKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDAAIGSdfpgrLLLIFGLLSVLVAAFFLLRQRD 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 266 LKKIIALSTLSQLGLMISILCLGShDLAFF----HLLTHALFKALLFMCAGAIIHSLGNcQDIRYMGGLVSSMPLTCAYF 341
Cdd:PRK06458 305 IKRLFAYSSIEHMGLIAFALGIGG-PLGIFaallHMLNHSLTKSAIFFASGNVLQKYGT-RDINVIRGLLKVSPLTGWGL 382
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1999117240 342 NICNFALCGLPFLSGFYSKDLIVES-MSMGYLNMFVYVVFYLSVGLTA 388
Cdd:PRK06458 383 MLGALAIAGMPPFGVFISEFLILTAgLARGPLLIAILLLLLLTLAFAA 430
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
53-399 |
7.20e-11 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 64.58 E-value: 7.20e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 53 LDWMSLLFMSFVLFISAVVINYSEEYM-MGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALVIY-YQ 130
Cdd:TIGR01770 68 VDNFALLIKLILLLSTLLTFFFALSYLsKEKINKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLkRK 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 131 NVKSSNAGMLTALTNRIGDVALLMSIAWM------LNFGSWNYVFYLEFPKDGYLGIVATFVVLAAITKSAQIPFSSWLP 204
Cdd:TIGR01770 148 SRFSTEAGLKYFILGAFSSGLLLFGISLIygftgsLNFEDLLLFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVP 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 205 AAM-AAPTPVSALVHSSTLVtAGVYLLIR----FNAAFSGDLLKFLLVLSMMTMFMAGLGANFEYDLKKIIALSTLSQLG 279
Cdd:TIGR01770 228 DVYeGAPTPVTAFFSIVPKI-AIFAVFLRlflyILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVG 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 280 LMISILCLGSHDL---AFFHLLTHALFKALLFMCAgaIIHSLGNCQDIRY---MGGLVSSMPLTCAYFNICNFALCGLPF 353
Cdd:TIGR01770 307 YILIGLLAGTLEGikaVLFYIFIYALMSLGAFGVL--SLLRSYKDEWIEYisdFAGLFKTNPILAILILIFMFSLAGIPP 384
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1999117240 354 LSGFYSKDLIVESMSMGYLNMFVYVVFYLSVgLTACYSFRLVYYCF 399
Cdd:TIGR01770 385 LAGFFGKFYVFFALLKSGLYWLAVIAVLTSV-IGAFYYLRVVKVMY 429
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
54-360 |
2.76e-10 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 62.71 E-value: 2.76e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 54 DWMSLLFMSFVLFISAVVINYSEEYMM-GDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALVIYY-QN 131
Cdd:CHL00049 78 NNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKD 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 132 VKSSNAGMLTALTNRIGDVALLMSIAWMlnFGSWNYVFYLEFPKDGYL-----GIVATFVVLAAIT-----KSAQIPFSS 201
Cdd:CHL00049 158 VRSNEATMKYLLMGGASSSILVYGFSWL--YGLSGGEIELQEIVNGLIntqmyNSPGISIALIFITvgigfKLSLAPFHQ 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 202 WLPAAM-AAPTPVSALVhSSTLVTAGVYLLIR-FNAAF---SGDLLKFLLVLSMMTMFMAGLGANFEYDLKKIIALSTLS 276
Cdd:CHL00049 236 WTPDVYeGSPTPVVAFL-SVTSKVAASALATRiFDIPFyfsSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIG 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 277 QLG-LMISILClGSHDLAFFHLLTHALFkaLLFMCAGA----IIHSLGNCQD-IRYMGGLVSSMPLTCAYFNICNFALCG 350
Cdd:CHL00049 315 QIGyVIIGIIV-GDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGG 391
|
330
....*....|
gi 1999117240 351 LPFLSGFYSK 360
Cdd:CHL00049 392 IPPLAGFFGK 401
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
177-360 |
4.02e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 62.08 E-value: 4.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 177 GYLGIVATFVVLAAITKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNA-----AFSGDLLKFLLVLSM 250
Cdd:PRK08676 203 SVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSAllrqsGAAEQFSNVLIGLGI 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 251 MTMFMAGLGANFEYDLKKIIALSTLSQLGLMISILCLGSHDLAF---FHLLTHALFKALLFMCAGaIIHSLGNCQDIRYM 327
Cdd:PRK08676 282 FSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRI 360
|
170 180 190
....*....|....*....|....*....|...
gi 1999117240 328 GGLVSSMPLTCAYFNICNFALCGLPFLSGFYSK 360
Cdd:PRK08676 361 FDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSK 393
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
178-359 |
3.93e-08 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 55.81 E-value: 3.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 178 YLGIVATFVVlaaitKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNAAFSGD----LLKFLLVLSMMT 252
Cdd:PRK12561 188 YAGFLIAFGV-----KLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNVQMLPDahvyFAPALAILGVVN 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 253 MFMAGLGANFEYDLKKIIALSTLSQLGLMIsiLCLGSHDL-----AFFHLLTHALFKALLFMCAGAI---IHSLGncqdI 324
Cdd:PRK12561 262 IIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAMLQMISHGLIAAALFFLTGVTyerTHTLS----I 335
|
170 180 190
....*....|....*....|....*....|....*
gi 1999117240 325 RYMGGLVSSMPLTCAYFNICNFALCGLPFLSGFYS 359
Cdd:PRK12561 336 PNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-441 |
5.24e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 55.51 E-value: 5.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 89 ILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALVIYYQNVKSSNAGMLTALTNRIGDVALLMSIAwmlnfgswnyv 168
Cdd:PRK12664 66 MLCYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVGAS----------- 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 169 fyLEFPKDGYLGIVATFVVLAAITKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFnaaFSGDllKFLLVL 248
Cdd:PRK12664 135 --GQAQNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLLF---FSGE--EILLFL 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 249 SMMTMFMAGLGANFEYDLKKIIALSTLSQLGLMI-SILCLGS----HDLAFFHLLTHALFKALLFMCAGAIIHSLGNCqD 323
Cdd:PRK12664 208 GIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIiAIGFSGSsgvaIGILILQIVLSVVYQTLLFMVADSVINRTRKF-N 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 324 IRYMGGLVsSMPLTCAYFNICNFALCGLPFLSGFYSKDLIVESMSMGYLNMFVYVVFY--LSVGLTACYSFRLVYYCFtg 401
Cdd:PRK12664 287 LNRVGGLF-KMSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYKKLFliCSLLLFASVGLKFFWYAF-- 363
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1999117240 402 eFNLLSSHGLSDEPGPMLE-SMGILIFMVIFGGSLLMWLMF 441
Cdd:PRK12664 364 -ISKSKSKPEAEKVYIGSKlSMIILVLICVVLGMFNSYLLF 403
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
197-415 |
1.94e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 53.94 E-value: 1.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 197 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAFSGD----LLKFLLVLSMMTMFMAGLGANFEYDLKKIIAL 272
Cdd:PRK02546 230 VPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDahaqFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAY 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 273 STLSQLGLMI----SILCLGSHDlAFFHLLTHALFKALLFMCAGAI---IHSLgncqDIRYMGGLVSSMPLTCAYFNICN 345
Cdd:PRK02546 310 SSISHMGFVLigigSFTDLGTSG-AMLQMISHGLIGASLFFLVGATydrTHTL----MLDEMGGVGQKMRKMFAMWTACS 384
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1999117240 346 FALCGLPFLSGFYSKDLIVESM--SMGYLNMF-VYVVFYLSVG--LTACYSFRLVYYCFTGEFN--LLSSHGLSD-EP 415
Cdd:PRK02546 385 LASLALPGMSGFVAELMVFVGFatSDAYTLPFrVVVVFLAAVGviLTPIYLLSMLREIFFGPENkeLVSHEKLVDaEP 462
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
54-360 |
3.51e-07 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 53.13 E-value: 3.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 54 DWMSLLFMSFVLFISAVVINYSEEYM-MGDVNLTRFILLVVMFVLSMMLLIISPNLVSILLGWDGLGLVSYALVIYYQNV 132
Cdd:PRK02504 77 DNLSIAFRAIIALSTLVTLLMSWRYVeQSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTGYMKRD 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 133 KSSNAGMLTALTNRIGDVALL---MSIAWMLNFGSWNYVFYLE--FPKDGYLGIVATFVVLAAIT-KSAQIPFSSWLPAA 206
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFlygSSLLYGLSGGSTQLSAIALalITSPSLGLALALVFVIAGIAfKISAVPFHQWTPDV 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 207 M-AAPTPVSALVhSSTLVTAGVYLLIRF-NAAFSG--DLLKFLL-VLSMMTMFMAGLGANFEYDLKKIIALSTLSQLG-L 280
Cdd:PRK02504 237 YeGSPTPVVAFL-SVGSKAAGFALAIRLlVTAFPSfdEQWKLLFtALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGfV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 281 MISILClGSHD---LAFFHLLTHalfkalLFMCAGA----IIHSLGNCQD-IRYMGGLVSSMPLTCAYFNICNFALCGLP 352
Cdd:PRK02504 316 MIGLVA-GTEAgyaSMVFYLLAY------LFMNLGAfacvILFSLRTGTDqISDYAGLYQKDPLLTLGLSLCLLSLGGIP 388
|
....*...
gi 1999117240 353 FLSGFYSK 360
Cdd:PRK02504 389 PLAGFFGK 396
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
245-371 |
1.22e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 51.19 E-value: 1.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 245 LLVLSMMTMFMAGLGANFEYDLKKIIALSTLSQLGLMISILCLG---SHDLAFFHLLTHALFKALLFMCAGaIIHSLGNC 321
Cdd:PRK06277 269 LIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAG-IVSYRTKT 347
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1999117240 322 QDIRYMGGLVSSMPLTCAYFNICNFALCGLPFLSGFYSKDLIVE-SMSMGY 371
Cdd:PRK06277 348 SNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQaAMQANM 398
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
197-363 |
8.98e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 45.08 E-value: 8.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 197 IPFSSWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFNAAFSGD----LLKFLLVLSMMTMFMAGLGANFEYDLKKIIA 271
Cdd:PRK06473 222 VPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVGLFPEawvyLAPWLATWAVVSVLYGASCAIAQKDMKKMVA 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 272 LSTLSQLGLMI---------SILClgshdlAFFHLLTHALFKALLFMCAGAIIHSLGNcQDIRYMGGLVS---SMPLTCA 339
Cdd:PRK06473 301 YSSIGHMGYILlaaaaatplSILA------AVFQMISHGLISALLFLLVGVVYKKTGS-RDVDVLRGLLNperGLPITGS 373
|
170 180
....*....|....*....|....
gi 1999117240 340 YFNICNFALCGLPFLSGFYSKDLI 363
Cdd:PRK06473 374 LMILGVMASAGIPGMVGFIAEFLV 397
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
160-392 |
1.15e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 44.91 E-value: 1.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 160 LNFGSWNYVFYLEFPKDGYLGIVatfvvLAAITKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAF-- 237
Cdd:MTH00226 215 LTLASCSHVVSEQTQKWIFLGIF-----LAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPIlp 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 238 --SGDLLKFLLVLSMMTMFMAGLGANFEYDLKKIIALSTLSQLGLmiSILCLGSHDL-----AFFHLLTHALFKALLFMC 310
Cdd:MTH00226 290 lgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGL--VSITLVTHDIigltgSIFIMLAHGIVSSLLFIL 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 311 AgAIIHSLGNCQDIRYMGGLVSSMPLTCAYFNICNFALCGLPFLSGFYSKDLIVesMSMGYLNMFVYVVFYLSVGLTACY 390
Cdd:MTH00226 368 V-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSI--LSSFNWNPIIGVFVCSGVILSAVY 444
|
..
gi 1999117240 391 SF 392
Cdd:MTH00226 445 SF 446
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
178-357 |
1.35e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 44.66 E-value: 1.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 178 YLGIVATFVVLAaiTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAFSGDLLKF----LLVLSMMTM 253
Cdd:MTH00217 206 YFIFLGFFLSLA--IKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYfsplIQTLSLLAI 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 254 FMAGLGANFEYDLKKIIALSTLSQLGLMisILCLGSHDL-----AFFHLLTHALFKALLFMcAGAIIHSLGNCQDIRYMG 328
Cdd:MTH00217 284 IYGSLTTCRQVDLKRIIAYSSVAHMGLV--TLGIFSHTIqglvaAIFLMLAHGLVSSALFI-AVTFLYERHHTRLIKYYR 360
|
170 180
....*....|....*....|....*....
gi 1999117240 329 GLVSSMPLTCAYFNICNFALCGLPFLSGF 357
Cdd:MTH00217 361 GMVITMPLFGILMLLLVLANASIPLSCNF 389
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
40-88 |
3.45e-04 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 38.56 E-value: 3.45e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 1999117240 40 LSLNSVSLVFTVLLDWMSLLFMSFVLFISAVVINYSEEYMMGDVNLTRF 88
Cdd:pfam00662 2 LSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
181-447 |
1.01e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 42.01 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 181 IVATFVVLAAITKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNAAFSGDLLKF----LLVLSMMTMFMA 256
Cdd:PRK07363 206 ILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLvapgLAIIGTISVIYG 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 257 GLGANFEYDLKKIIALSTLSQLGlMISILCLGSHDLAFF----HLLTHALFKALLFMCAGAIIHSLGNcQDIRYMGGLVS 332
Cdd:PRK07363 286 ALSAIAQKDIKRMVAYSSIGHMG-YILVAAAAGTQLSLLgavaQMISHGLILALLFHLVGIVERKVGT-RDLDVLNGLMN 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 333 ---SMPLTCAYFNICNFALCGLPFLSGFYSKDLIVE-SMSMGYLNMFVYVVfylSVGLTACYSFRLV-YYCFTGEFNLLS 407
Cdd:PRK07363 364 pirGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQgSFSTFPIPTLLCIV---ASGLTAVYFVILLnRTCFGRLDNKLA 440
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1999117240 408 SHG--LSDEPGPMLESMGILIFMVIFGGSLLMWLMFPTPVFI 447
Cdd:PRK07363 441 YYPkvLWSEKIPALILTALILFLGVQPNWLVRWSEPTTTAMV 482
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
178-432 |
1.10e-03 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 41.85 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 178 YLGIVATFVVlaaitKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN--------AAFSgdllKFLLVLS 249
Cdd:CHL00011 214 YIGFLIAYAV-----KLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINmellphahSIFS----PWLVIVG 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 250 MMTMFMAGLGANFEYDLKKIIALSTLSQLGLMI----SILCLGSHDlAFFHLLTHALFKALLFMCAGAiihslgNCQDIR 325
Cdd:CHL00011 285 AIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIigigSITDTGLNG-AILQIISHGFIGAALFFLAGT------SYDRIR 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 326 Y-----MGGLVSSMPLTCAYFNICNFALCGLPFLSGFYSKDLIVESM--SMGYLNMF-VYVVFYLSVG--LTACYSFRLV 395
Cdd:CHL00011 358 LvyldeMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVFFGIitSQKYLLMPkILITFVMAIGmiLTPIYLLSML 437
|
250 260 270
....*....|....*....|....*....|....*....
gi 1999117240 396 YYCFTG--EFNLLSSHGLSDEPGPMLESMGILIFMVIFG 432
Cdd:CHL00011 438 RQMFYGykLFNVPNSYFFDSGPRELFISICILLPVIGIG 476
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
39-369 |
1.79e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 41.31 E-value: 1.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 39 ILSLNSVSLVFTVLLDWMSllFMSFVLFISAVVINYSEEYMMGDVNLTRFI-LLVVMFVLSMMLLIISPNLVSILLGWDG 117
Cdd:PRK06459 26 LTMISSIILLITSIYEYNG--VLSFFSIISTIVWILASLYSIEYDHYGKWLsSLYILTILGMAIVLTSDNYLLFLAGWEI 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 118 LGLVSYALVIYYQNvKSSNAGMLTALtNRIGDVALLMSIAWMLNF-GSWNYVFYLEFpkdgylgIVATFVVLAAITKSAQ 196
Cdd:PRK06459 104 MTIPSYVAIALTKK-NKRPAFVFMAF-GELSTVLILAGFAWAFIIsGTTNFSYLPSP-------VPLILASFGFIIKMGM 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 197 IPF--SSWLPAAMA-APTPVSAlVHSSTLVTAGVYLLIRF----NAAFSGDLLKFLLVLSMMTMFMAGLGANFEYDLKKI 269
Cdd:PRK06459 175 MPFlvSEWLPIAHGnAPSNFSA-ILSATMTLMGVYGILKMtiltQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGL 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1999117240 270 IALSTLSQLGLMISILCL------GSHDLAFFHLLT-------HALFKALLFMCAGAIihslgNCQDIRYMGGLVSSMPL 336
Cdd:PRK06459 254 LAFSTIENNGAILVALGLymvtkqLITSIEHFSLITvilysfaHSVAKTGLFLSSGLQ-----EKQSITYSKKIRNRWIE 328
|
330 340 350
....*....|....*....|....*....|...
gi 1999117240 337 TCAYfnICNFALCGLPFLSGFYSKDLIVESMSM 369
Cdd:PRK06459 329 LGLT--LLASSLSGLLPNIGGVASWLLLESLFM 359
|
|
|