|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
1-606 |
0e+00 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 1046.20 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 1 MYILILLFPFLGSSLSLITGRTLGKLGARILTSSCLIVSLSLSVLIFYETTLNFSTTYIKLWRWLDSDLVTADFGLQFDP 80
Cdd:MTH00020 1 MYLLVLFLPLLGALLSGLFGRKIGEKGAGILTSSCLIISLSWSFLIFYEILFNSSTTYIKLWRWLDSDLLTVYFGLQFDG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 81 LTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIEA 160
Cdd:MTH00020 81 LVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 161 NRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFNIVGLSPSDSITLICLFLFIGAVGKSAQLGLHTWLPDAMEGP 240
Cdd:MTH00020 161 NKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEGP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 241 TPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLS 320
Cdd:MTH00020 241 TPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 321 QYSISLFHLMNHAFFKALLFLSAGSVIHALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILELAY 400
Cdd:MTH00020 321 HYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAF 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 401 DQYYLAFAHWLGVFSALLTAAYSLRLVYLTFISNTNTKKEIFSDAHEGSWNLTLPLILLALGSIFVGYLTKEIIWSFQIT 480
Cdd:MTH00020 401 GQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLKKAVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEMIWSFQIT 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 481 FSPIIPTSIKLMPVIFSLFGAGAAVVLYHYSSRIFNAPTSPVGLAGYTFLYSAWQFNYIINHFLVQNVWRLGHLITYRAL 560
Cdd:MTH00020 481 LPPIVPLSIKLLPVFLSLGGIGLVIILYFYSSKTFRVPFSFIGRNSYTFLGSAWQFNYILNYFLIKKIWKGGHLISYRTI 560
|
570 580 590 600
....*....|....*....|....*....|....*....|....*.
gi 2088232037 561 DKGIVELIGPQEISKFVITLTQGLSKIQSGLITTYALGFFIALVLL 606
Cdd:MTH00020 561 DKGVLELVGPKGISNFLIILTQGLSSLQSGLVFNYALVILIGVAIF 606
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
1-605 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 957.15 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 1 MYILILLFPFLGSSLSLITGRTLGKLGARILTSSCLIVSLSLSVLIFYETTLNFSTTYIKLWRWLDSDLVTADFGLQFDP 80
Cdd:MTH00210 1 MYILVLFLPLLSAIISGLFGRKIGTKGAGILTSSCIVISAIVSCCIFYETTLNGSATYIKLWRWFDSELLTTYFGLQFDS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 81 LTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIEA 160
Cdd:MTH00210 81 LTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 161 NRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFNIVGLSP-SDSITLICLFLFIGAVGKSAQLGLHTWLPDAMEG 239
Cdd:MTH00210 161 NKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNInKESLTIICLLLFIGAVGKSAQLGLHTWLPDAMEG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 240 PTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGL 319
Cdd:MTH00210 241 PTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 320 SQYSISLFHLMNHAFFKALLFLSAGSVIHALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILELA 399
Cdd:MTH00210 321 SNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELT 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 400 YDQYYLAFAHWLGVFSALLTAAYSLRLVYLTFISNTNTKKEIFSDAHEGSWNLTLPLILLALGSIFVGYLTKEIIWSFQI 479
Cdd:MTH00210 401 YDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGVHESSWNITFPLLLLAFGSIFVGYLGKEVVLSNVI 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 480 TfsPIIPTSIKLMPVIFSLFGAGAAVVLYHYSSRIFNAPTSPV----GLAGYTFLYSAWQFNYIINHFLVQNVWRLGHLI 555
Cdd:MTH00210 481 P--PIVPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISRRGVsirlYHVIYTFLNSAWQFNYVINHFIVKNIWKFGHLI 558
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|
gi 2088232037 556 TYRALDKGIVELIGPQEISKFVITLTQGLSKIQSGLITTYALGFFIALVL 605
Cdd:MTH00210 559 TYRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYALIMIIFTTL 608
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-612 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 651.07 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 1 MYILILLFPFLGSSLSLITGRTLGKLGARILTSSCLIVSLSLSVLIFYETTLNFSTTY-IKLWRWLDSDLVTADFGLQFD 79
Cdd:PRK06590 4 LLWLIVLLPLIGALILGLFGRRIGEKWAHLVGTGLVGLSALLSLVVFFDFLLGGGRAFsQTLWTWISVGDFDVDFGLRVD 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 80 PLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIE 159
Cdd:PRK06590 84 GLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPS 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 160 ANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFNIVGLSPSDS---ITLICLFLFIGAVGKSAQLGLHTWLPDA 236
Cdd:PRK06590 164 AGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVFAAAPQFFGLGwsaLTLICLLLFIGAMGKSAQFPLHTWLPDA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 237 MEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMA 316
Cdd:PRK06590 244 MEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLA 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 317 CGLSQYSISLFHLMNHAFFKALLFLSAGSVIHALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLIL 396
Cdd:PRK06590 324 LGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEIL 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 397 ELAYDQYYLaFAHWLGVFSALLTAAYSLRLVYLTFisnTNTKKEIFSDAHEGSWNLTLPLILLALGSIFVGYLTKEIIWS 476
Cdd:PRK06590 404 EAAFANGHI-NLFVAGLVGAFLTAFYSFRLIFLVF---HGKEKEKIHHPHESPAVMTLPLIVLAVLSVFAGALIVPPFLG 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 477 F--------QITFSPIIPTSIKLMPVIFSLFGAGAAVVLYHYSSRIFNAPTSPVGLAgYTFLYSAWQFNYIINHFLVQNV 548
Cdd:PRK06590 480 VlplttelaHGEAEHHLPVWVALLPLVVALAGIALAWLLYLKKPTLPTSIAAPGRFL-YTLLRNKYYFDELYEKVFVKPG 558
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2088232037 549 WRLGHLItYRALDKGIVELIGpQEISKFVITLTQGLSKIQSGLITTYALGFFIALVLLCGSVML 612
Cdd:PRK06590 559 LALARLL-WKDGDDGIIDGLV-PNSARLVGGGSRVLRRLQTGYLRHYAASMLIGAVVLLALLLL 620
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
1-600 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 598.48 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 1 MYILILLFPFLGSSLSLITGRTLGKLGARILTSSCLIVSLSLSVLIFYETTLNFSTTYIKLWRWLDSDLVTADFGLQFDP 80
Cdd:MTH00032 1 MYLLVLLLPFINAFLLGFFGRLIGTIGSGILSTICMGSSTLIALFLAYEVLINDAVVHIELYKWIESEIFITHIGLLYDT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 81 LTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIEA 160
Cdd:MTH00032 81 LSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 161 NRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSL---------------FNIVGLSPSDSITLICLFLFIGAVGKSA 225
Cdd:MTH00032 161 NKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgsgimdrgyyGGGAYESPLAPFAIIGILLLIGCIGKSA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 226 QLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYS 305
Cdd:MTH00032 241 QLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 306 TCSQLGYMVMACGLS-QYSISLFHLMNHAFFKALLFLSAGSVIHALA-DEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGF 383
Cdd:MTH00032 321 TCSQLGYMVLIIGIEgSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 384 PYLTGFYSKDLILELAYDQYYL------------------------------------AFAHWLGVFSALLTAAYSLRLV 427
Cdd:MTH00032 401 PYLTGFYSKDLILELTYSGRNMgipfgssllkiqgdigikkddrgsiggpegypsrgsAFAFWLGTVAALLTAFYSIRLV 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 428 YLTFISNTNTKKEIFSDAHEG--SWNLTLPLILLALGSIFVGYLTKEIIwsFQITFSPIIPTSIKLMPVIFSLFGAGAAV 505
Cdd:MTH00032 481 YITFIISPNSPKESLISSHINivDKRVLTVLSLLCFGAIFVGYLIQDIL--IGDIEHPIVPPLIKVMPTLMGLFGMGLCL 558
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 506 VLYHYSSRI-----FNAPTSPVGLAGYTFLYSAWQFNYIINHFLVQNVWRLGHLITYRALDKGIVELIGPQEISKFVITL 580
Cdd:MTH00032 559 WAQKGTREGelywgFDPIGPSFLLSIYSFLGGAWQGDHLINKLVAIPLFSFGHWGIYKTLDRGWLELFGPQGISTIALRV 638
|
650 660
....*....|....*....|
gi 2088232037 581 TQGLSKIQSGLITTYALGFF 600
Cdd:MTH00032 639 SQFISNLQSGVISRYALVLL 658
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-606 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 593.28 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 1 MYILILLFPFLGSSLSLITGRTLGKLGARILTSSCLIVSLSLSVLIFYETTLNFSTTYikLWRWLDSDLVTADFGLQFDP 80
Cdd:COG1009 3 LLWLIPLLPLLGALLAGLLGRRLGRRAAGWLAALAPLAAFVLSLLLFPAVLGGEVVVE--LYTWIPVGSLGLDFGFRLDG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 81 LTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIEA 160
Cdd:COG1009 81 LSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 161 NRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFN-IVGLSPSDSITLICLFLFIGAVGKSAQLGLHTWLPDAMEG 239
Cdd:COG1009 161 RRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAaAPTILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 240 PTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGL 319
Cdd:COG1009 241 PTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 320 SQYSISLFHLMNHAFFKALLFLSAGSVIHAlADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILELA 399
Cdd:COG1009 321 GAYVAALFHLLTHAFFKALLFLGAGSVIHA-TGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAA 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 400 YDQYYLA-FAHWLGVFSALLTAAYSLRLVYLTFISNTNTKKEifSDAHEGSWNLTLPLILLALGSIFVGYLTKEIIWSFq 478
Cdd:COG1009 400 LEAGGLGpLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTP--KHPHESPWLMTLPLVVLAVLSLVLGLLLPGLLEGL- 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 479 ITFSPIIPTSIKLM--------PVIFSLFGAGAAVVLYhYSSRIFNAPTSPVGLagYTFLYSAWQFNYIINHFLVQNVWR 550
Cdd:COG1009 477 LAPAAVLGGELHLAhglllnalPLLLSLLGIALGYLLY-LKRPLPALAERLKPL--YRLLANKWYFDELYDALFVKPVRA 553
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*.
gi 2088232037 551 LGHLItyrALDKGIVELIgPQEISKFVITLTQGLSKIQSGLITTYALGFFIALVLL 606
Cdd:COG1009 554 LARFL---WFDRYVIDGI-VNGLARLTLFSGRLLRRLQTGYLQFYALTILLGVVVL 605
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
1-602 |
0e+00 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 585.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 1 MYILILLFPFLGSSLSLITGRTLGKLGARILTSSCLIVSLSLSVLIFYETTLNFS--TTYIKLWRWLDSDLVTADFGLQF 78
Cdd:TIGR01974 2 LIFLIVFLPLIGFLIAGLFGRRIGERVSGIIGIGSVGLSAALSAFVFVDFFLNGEgeAFTQSLFPWISVGGFQVDFGLRL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 79 DPLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRI 158
Cdd:TIGR01974 82 DGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKP 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 159 EANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFnivGLSPSDS---ITLICLFLFIGAVGKSAQLGLHTWLPD 235
Cdd:TIGR01974 162 SANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVF---ALAPGAFfsaLTLICLLLFIGAMGKSAQLPLHTWLPD 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 236 AMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVM 315
Cdd:TIGR01974 239 AMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFL 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 316 ACGLSQYSISLFHLMNHAFFKALLFLSAGSVIHALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLI 395
Cdd:TIGR01974 319 ALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLI 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 396 LELAYDQYYLAFAHWLGVFSALLTAAYSLRLVYLTFisNTNTKKEIFSDAHEGSWNLTLPLILLALGSIFVGYLTKEIIW 475
Cdd:TIGR01974 399 LEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVF--HGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFE 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 476 SFQITFSPII---------PTSIKLMPVIFSLFGAGAAVVLYHYSSRIFNAPTSPVGlAGYTFLYSAWQFNYIINHFLVQ 546
Cdd:TIGR01974 477 FLKGVLPTSAepalehhhvPALEIWSPTAVAILGILLAYLLYLGNPTLPAKIAQRHS-GLYRLLLNKWYFDELYDKVFVK 555
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*.
gi 2088232037 547 NVWRLGHLITYRALDKgIVELIGPQeISKFVITLTQGLSKIQSGLITTYALGFFIA 602
Cdd:TIGR01974 556 PYLFLGKLLWKDPDDK-IIDGFGPG-IARLVGAISKRLRKSQTGYLRWYAASMVVG 609
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-612 |
3.60e-144 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 434.38 E-value: 3.60e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 1 MYILILLFPFLGSSLSLITGRTLGKLGariltsscLIVSLSLSVLIFYETTlNFSTTYIKlWRWLDSDLVTADFGLQFDP 80
Cdd:MTH00211 10 LLILILLLLPLLLPLNNSKLHIKKAVK--------LSFFISLIPLLIFLDQ-GLETILTN-WSWINLGLFSLNLSFKFDF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 81 LTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIEA 160
Cdd:MTH00211 80 YSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 161 NRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFNIvglspSDSITLICLFLFIGAVGKSAQLGLHTWLPDAMEGP 240
Cdd:MTH00211 160 NTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFIL-----NLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGP 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 241 TPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLS 320
Cdd:MTH00211 235 TPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLN 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 321 QYSISLFHLMNHAFFKALLFLSAGSVIHALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILELAY 400
Cdd:MTH00211 315 QPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMN 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 401 DQYYLAFAHWLGVFSALLTAAYSLRLVYLTFISNTNTKKeiFSDAHEGSWNLTLPLILLALGSIFVGYLtkeIIWSFQIT 480
Cdd:MTH00211 395 GSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLS--LSPINENYKLLKNPLKRLALGSILAGFI---ITSNLPPE 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 481 FSPI--IPTSIKLMPVIFSLFGAGAAVVLYHYSSRIFNAPTSpvglagyTFLYSAWQFNYIINHFLVQNVWRLGHLITYR 558
Cdd:MTH00211 470 KPEIlsLPFLLKLMPLLVTIVGLLLGLELVNLTHKQLKTSTL-------SFSNMLGYYPPIIHRLLPKLSLKWGQTLSTH 542
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....
gi 2088232037 559 ALDKGIVELIGPQEISKFVITLTQGLSKIQSGLITTYALGFFIALVLLCGSVML 612
Cdd:MTH00211 543 LMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLLSLLLILLLFLL 596
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
40-606 |
5.92e-138 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 419.38 E-value: 5.92e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 40 LSLSVLIFYeTTLNFSTTYIKLWRWLDSDLVTADFGLQFDPLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSL 119
Cdd:MTH00208 68 LSLINLLIW-ILLGCPNINISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLII 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 120 FTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLdfvSLFN 199
Cdd:MTH00208 147 FLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSW---NLNE 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 200 IVGL-SPSDSITLICLF-LFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVV 277
Cdd:MTH00208 224 ILSLnNSNSFLINILLFgILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLC 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 278 TIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLSQYSISLFHLMNHAFFKALLFLSAGSVIHALADEQDMR 357
Cdd:MTH00208 304 LILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLR 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 358 KMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILELAYDQYYLAFAHWLGVFSALLTAAYSLRLVYLTFISNTNT 437
Cdd:MTH00208 384 KMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSF 463
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 438 KKeiFSDAHEGSWNLTLPLILLALGSIFVGYltkeIIWSFQITFSPIIPTSI-KLMPVIFSLFGAGAAVVLYHYSSRIFN 516
Cdd:MTH00208 464 SP--LSPISEENPNLTNPLLRLAIGTIISGW----FFSNFVFNLPPLTLPLIlKSLPLIVTIIGAAFSFSFLLSLSSNPI 537
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 517 APTSpvglagYTFLYSAWQFNYIINHFLVQNVWRLGHLITYRALDKGIVELIGPQEISKFVITLTQGLSKIQSGLITTYA 596
Cdd:MTH00208 538 NSNF------FSFLSNQWFFVNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYL 611
|
570
....*....|
gi 2088232037 597 LGFFIALVLL 606
Cdd:MTH00208 612 LSSTLLFLLI 621
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
99-606 |
1.15e-132 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 404.93 E-value: 1.15e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 99 FSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIEANRAAIKAMLVNRVGDIGF 178
Cdd:MTH00004 103 FSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGL 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 179 VLAMLAIWDQFGCLDFVSLFnivglSPSDSITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVF 258
Cdd:MTH00004 183 ILSMAWLAMTLNTWEIQQLF-----SPTQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIF 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 259 LLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLSQYSISLFHLMNHAFFKAL 338
Cdd:MTH00004 258 LLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAM 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 339 LFLSAGSVIHALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILELAYDQYYLAFAHWLGVFSALL 418
Cdd:MTH00004 338 LFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSF 417
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 419 TAAYSLRLVYLTFISNTNTKKeiFSDAHEGSWNLTLPLILLALGSIFVGYLTKEIIwsFQITFSPI-IPTSIKLMPVIFS 497
Cdd:MTH00004 418 TAAYSLRMILLVQTGFPRTPP--TTPINENTPTIINPITRLALGSILAGLLISSTI--LPTKTPPMtMPTTTKLAALIVT 493
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 498 LFGAGAAVVLYHYSSriFNAPTSPVGLagYTFLYSAWQFNYIINHFLVQNVWRLGHLITYRALDKGIVELIGPQEISKFV 577
Cdd:MTH00004 494 ILGILLALELSNMTT--TLTPPKQNTL--HNFSNQLAFFNPLTHRLLPMTLLKSSQKIATHLIDLSWLEKMGPKGLANLQ 569
|
490 500
....*....|....*....|....*....
gi 2088232037 578 ITLTQGLSKIQSGLITTYaLGFFIALVLL 606
Cdd:MTH00004 570 LTASKTLTTLQKGLIKNY-LTSFALTILL 597
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
62-605 |
1.27e-127 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 391.96 E-value: 1.27e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 62 WRWLDSDLVTADFGLQFDPLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWE 141
Cdd:MTH00066 64 FHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWE 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 142 GVGLCSYLLINFWLTRIEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFnivglSPSDSITLICLFLFIGAV 221
Cdd:MTH00066 144 GVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIF-----LLNDNSTLPLLGLILAAA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 222 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKV 301
Cdd:MTH00066 219 GKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKI 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 302 IAYSTCSQLGYMVMACGLSQYSISLFHLMNHAFFKALLFLSAGSVIHALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLM 381
Cdd:MTH00066 299 VAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALT 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 382 GFPYLTGFYSKDLILELAYDQYYLAFAHWLGVFSALLTAAYSLRLVYltFISNTNTKKEIFSDAHEGSWNLTLPLILLAL 461
Cdd:MTH00066 379 GTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIY--FSSMKFPRSLPLSPINENNPLIINPIKRLAW 456
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 462 GSIFVGYLtkeIIWSFQITFSPI--IPTSIKLMPVIFSLFGAGAAVVLYHYSSRIFNAPTSpvglagYTFLYSAWQFNYI 539
Cdd:MTH00066 457 GSIIAGLL---IIFNILPMKPQIltMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTKM------HSFSNLLAFFPTI 527
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2088232037 540 INHFLVQNVWRLGHLITYRALDKGIVELIGPQEISKFVITLTQGLSKIQSGLITTYALGFFIALVL 605
Cdd:MTH00066 528 IHRLSPKTNLNSGQNIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLITLLL 593
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
4-431 |
1.38e-127 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 394.01 E-value: 1.38e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 4 LILLFPFLGSSLS---LIT-GRTLGKL--GARILTSSCLIVSLSLSVLIFYETtLNFSTTYIKLWRWLDSDLVTADFGLQ 77
Cdd:PRK07376 10 LIPVLPLLGAVLVglgLISfNQTTNRLrqPVAVLLISLVGAAAVLSYALLWSQ-IQGHEPYERLFEWASAGDFHLPMGYV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 78 FDPLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTR 157
Cdd:PRK07376 89 IDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 158 IEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDF----VSLFNIV--GLSPSDSITLICLFLFIGAVGKSAQLGLHT 231
Cdd:PRK07376 169 KGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFdgiaDRLSELVssGAVSGWLALLLCILVFLGPMAKSAQFPLHV 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 232 WLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLG 311
Cdd:PRK07376 249 WLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLG 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 312 YMVMACGLSQYSISLFHLMNHAFFKALLFLSAGSVIHALAD--------EQDMRKMGGLIKSIPFSYTMVVIGSLSLMGF 383
Cdd:PRK07376 329 YMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGI 408
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 2088232037 384 PYLTGFYSKDLILELAYDQYYLAfahWL-GVFSALLTAAYSLRLVYLTF 431
Cdd:PRK07376 409 PPFAGFWSKDEILGAAFEANPAL---WFvGFLTAGMTAFYMFRMYFLTF 454
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
99-605 |
6.14e-123 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 379.58 E-value: 6.14e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 99 FSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIEANRAAIKAMLVNRVGDIGF 178
Cdd:MTH00108 103 FSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGF 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 179 VLAMLAIWDQFGCLDFVSLFnivgLSPSDSITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVF 258
Cdd:MTH00108 183 ILAMAWFLLNLNSWDLQQIF----MLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVF 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 259 LLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLSQYSISLFHLMNHAFFKAL 338
Cdd:MTH00108 259 LLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAM 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 339 LFLSAGSVIHALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILELAYDQYYLAFAHWLGVFSALL 418
Cdd:MTH00108 339 LFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSL 418
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 419 TAAYSLRLVYLTF--------ISNTNtkkeifsdahEGSWNLTLPLILLALGSIFVGYLtkeIIWSFQITFSPI--IPTS 488
Cdd:MTH00108 419 TAAYSTRIIFFALlgqprfppLITIN----------ENNPLLINPIKRLLLGSIFAGFL---ISNNIPPTTIPQmtMPLY 485
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 489 IKLMPVIFSLFGAGAAVVLYHYSSRI-FNAPTSPvglagYTFLYSAWQFNYIINHFLVQNVWRLGHLITYRALDKGIVEL 567
Cdd:MTH00108 486 LKLTALAVTILGFILALELNLLTNNLkFKYPSNT-----FKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
|
490 500 510
....*....|....*....|....*....|....*...
gi 2088232037 568 IGPQEISKFVITLTQGLSKiQSGLITTYALGFFIALVL 605
Cdd:MTH00108 561 ILPKTISLIQMKASTTISN-QKGLIKLYFLSFLITLTL 597
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
99-605 |
1.16e-117 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 366.46 E-value: 1.16e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 99 FSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIEANRAAIKAMLVNRVGDIGF 178
Cdd:MTH00137 107 FASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 179 VLAM--LAI----WDqfgcldfvsLFNIVGLSPSDSITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATM 252
Cdd:MTH00137 187 ILAMawMATnlnsWE---------IQQIFALSKDFDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTM 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 253 VTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLSQYSISLFHLMNH 332
Cdd:MTH00137 258 VVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTH 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 333 AFFKALLFLSAGSVIHALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILElAYDQYYL-AFAHWL 411
Cdd:MTH00137 338 AFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIE-ALNTSHLnAWALTL 416
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 412 GVFSALLTAAYSLRLVYltFISNTNTKKEIFSDAHEG-----------SWnltlplillalGSIFVGYLtkeIIWSFQIT 480
Cdd:MTH00137 417 TLIATSFTAVYSLRVVF--FVSMGHPRFNPLSPINENnpavinpikrlAW-----------GSIIAGLL---ITSNILPL 480
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 481 FSPII--PTSIKLMPVIFSLFGAGAAVVLYHYSSRIFNA-PTSPV----GLAGYtflysawqFNYIINHFLVQNVWRLGH 553
Cdd:MTH00137 481 KTPVMtmPPLLKLAALIVTILGLLIALELASLTNKQFKPtPTLPPhhfsNMLGF--------FPAIIHRLTPKLNLTLGQ 552
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 2088232037 554 LITYRALDKGIVELIGPQEISKFVITLTQGLSKIQSGLITTYALGFFIALVL 605
Cdd:MTH00137 553 TIATQMVDQTWLEKTGPKGIASLQLPLITTTSNIQQGMIKTYLTLFLLTLAL 604
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
36-431 |
1.56e-116 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 367.29 E-value: 1.56e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 36 LIVSLSLSVLIFYETtLNFSTTYIKLWRWLDSDLVTADFGLQFDPLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMS 115
Cdd:CHL00025 48 LSIVMIFSLNLSIQQ-INGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFA 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 116 YLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFV 195
Cdd:CHL00025 127 YLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFR 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 196 SLFNIVG-LSPSDSI-----TLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQ 269
Cdd:CHL00025 207 DLFEIFNnLIYNNEVnllfaTLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIV 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 270 APMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLSQYSISLFHLMNHAFFKALLFLSAGSVIHA 349
Cdd:CHL00025 287 IPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHS 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 350 L--------ADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILELAYdQYYLAFAhWLGVFSALLTAA 421
Cdd:CHL00025 367 MepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILNDSW-LYSPIFA-IIAWSTAGLTAF 444
|
410
....*....|
gi 2088232037 422 YSLRLVYLTF 431
Cdd:CHL00025 445 YMFRIYLLTF 454
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
86-606 |
8.42e-99 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 315.93 E-value: 8.42e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 86 LLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTrIEANRAAI 165
Cdd:MTH00165 60 MSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQN-KKSYNAGM 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 166 KAMLVNRVGDIGFVLAMlAIWDQFGCLDFVSLFNIvgLSPSDSITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSA 245
Cdd:MTH00165 139 LTALSNRIGDVAILLSI-AWMMNFGSWNFIFYLDF--MKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSA 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 246 LIHAATMVTAGVFLLIRSSPLLEQAPMaLMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLSQYSIS 325
Cdd:MTH00165 216 LVHSSTLVTAGVYLLIRFNNLLFSSFF-SKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLA 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 326 LFHLMNHAFFKALLFLSAGSVIHALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILELAYDQYYL 405
Cdd:MTH00165 295 FFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLN 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 406 AFAHWLGVFSALLTAAYSLRLVYLTFISNTNTKkeIFSDAHEGSWNLTLPLILLALGSIFVGYLTKEIIwsFQITFSPII 485
Cdd:MTH00165 375 FFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLK--SLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLI--FPEPYMICL 450
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 486 PTSIKLMPVIFSLFGAGAAVVLYHYSsrIFNAPTSPVGLAGYTFLYSAWQFNYIINHFLVQNVWRLGHLItYRALDKGIV 565
Cdd:MTH00165 451 PFYLKLLTLFVILLGGWLGYELSLMS--LSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLS-LKSFDQGWS 527
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 2088232037 566 ELIGPQEISKFVITLTQGLSKIQSGLITTYALGFFIALVLL 606
Cdd:MTH00165 528 EYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFLLWMIIL 568
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
31-606 |
1.97e-93 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 301.38 E-value: 1.97e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 31 LTSSCLIVSLSLSVLIFYETTLNFSTTYIKLWRWLDSDLVTADFGLQFDPLTATMLLVVTSVSTLVHIFSTAYMEGDPHV 110
Cdd:MTH00151 5 SLSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 111 PRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRiEANRAAIKAMLVNRVGDiGFVLAMLAIwdqfg 190
Cdd:MTH00151 85 KRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNK-KSLSAGMLTALTNRIGD-VLILLSIAL----- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 191 cldFVSL--FNIVGLSPSDSITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLE 268
Cdd:MTH00151 158 ---LVLLghWSILSMWDFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLS 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 269 QAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLSQYSISLFHLMNHAFFKALLFLSAGSVIH 348
Cdd:MTH00151 235 SSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIH 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 349 ALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILELAYDQYYLAFAHWLGVFSALLTAAYSLRLVY 428
Cdd:MTH00151 315 SSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSF 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 429 ltFISNTNTKKEIFSDAHEGSWNLTLPLILLALGSIFVGYLtkeiIWSFQITFSP--IIPTSIKLMP---VIFSLFGAGA 503
Cdd:MTH00151 395 --CLVWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKL----LQSLFEGFSEefFLPSYLKLLIgfvILLGLFLSFG 468
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 504 AVVLYHYSSRifnaptspvGLAGYTFLYSAWQFNYIINHFLVQNVWRLGHLItYRALDKGIVELIGPQEISKFVITLTQG 583
Cdd:MTH00151 469 FWDSGFSSSK---------MVKLSFFFSSMWFLSPLSSQPLKSLSLKLSNSS-MKSLDMGWLEILGGQGVFKANKSFSVL 538
|
570 580
....*....|....*....|...
gi 2088232037 584 LSKIQSgLITTYALGFFIALVLL 606
Cdd:MTH00151 539 NESWPV-KWFNFFIGLILLLVLF 560
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
52-603 |
2.10e-85 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 280.38 E-value: 2.10e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 52 LNFSTTYIKLWRWLDSDLVTADFGLQFDPLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSD 131
Cdd:MTH00209 24 MWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLIFVP 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 132 NYPQLFIGWEGVGLCSYLLINFWLTRiEANRAAIKAMLVNRVGDIGFVLA-----MLAIWDQFgCLDFVSLFNIVglsps 206
Cdd:MTH00209 104 NLITLLLGWDGLGLVSYLLVIYYQNS-KSLSAGMLTALTNRVGDALLILSiawmlMHGNWNIF-YLNFNSNLGSV----- 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 207 dsitlICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAF 286
Cdd:MTH00209 177 -----ISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 287 MAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLSQYSISLFHLMNHAFFKALLFLSAGSVIHALADEQDMRKMGGLIKSI 366
Cdd:MTH00209 252 MASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQM 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 367 PFSYTMVVIGSLSLMGFPYLTGFYSKDLILELAYDQYYLAFAHWLGVFSALLTAAYSLRLVYLTFISNTNTKKeiFSDAH 446
Cdd:MTH00209 332 PITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKS--LNSSF 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 447 EGSWNLTLPLILLALGSIFVGYLTKEIIwsFQITFSPIIPTSIKLMPVIFSLFGAGAAVVLYHYSSRIFNaptspvGLAG 526
Cdd:MTH00209 410 DQNKLNLKPMLVLTLGSITGGSVMSWVM--VPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIK------GYKV 481
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2088232037 527 YTFLYSAWQFNYIINHFLVQNVWRLGHLITYrALDKGIVELIGPQEISKFVITLTQGLSKIQSGLITTYALGFFIAL 603
Cdd:MTH00209 482 NYFLSQMWFLPDLSSQPVNKFTMKLSKTMLK-LLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLIL 557
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
74-606 |
2.47e-77 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 258.93 E-value: 2.47e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 74 FGLQFDPLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINF 153
Cdd:MTH00207 51 FTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIY 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 154 WLTRIEANRAAIKAmLVNRVGDIGFVLAMLAIWDQfgcldfvSLFNIVGLSPSDSITLICLFLFIGAVGKSAQLGLHTWL 233
Cdd:MTH00207 131 YQNPKSLGAGMITA-LTNRIGDVMLLLSIGWTLNQ-------GHWSITNMWQTDMNNYIALSIMIAAMTKSAQMPFSSWL 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 234 PDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYM 313
Cdd:MTH00207 203 PAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVM 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 314 VMACGLSQYSISLFHLMNHAFFKALLFLSAGSVIHALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKD 393
Cdd:MTH00207 283 MASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKD 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 394 LILELA--YDQYYLAFAhwLGVFSALLTAAYSLRLVYLTFISNTNTKKeiFSDAHEGSWNLTLPLILLALGSIFVGYLtk 471
Cdd:MTH00207 363 LILESSlfYPHNSLMIL--MIFLATALTAAYSTRFTLAVLWSPNSSSP--YHHLEDEDKSLTTPMLLLTLGAITSGSA-- 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 472 eIIWS-FQITFSPIIPTSIKLMPVIFSLFGAgaavvLYHYSSRIFNAPTSPVGLAGYT---FLYSAWQFNYIINHFLVQN 547
Cdd:MTH00207 437 -LNWWlPTPQEEPILPLQYKLLPLLVVTLGA-----LLAWLFTTPNITKTPLLINNPLshfASCLMWFLVPLSSQFIMST 510
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 2088232037 548 VWRLGHLITyRALDKGIVELIGPQEISKFVITLTQGLSKIQSGLITTYALGFFIALVLL 606
Cdd:MTH00207 511 PMNLSHNYL-KLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLMMSFVLLTII 568
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-430 |
6.41e-71 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 237.74 E-value: 6.41e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 1 MYILILLFPFLGSSLSLITGRtlGKLGARILTSSCLIVSLSLSVLIFYETTLNFSTTYIkLWRWLdsdlvtADFGLQF-- 78
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLGR--RRRLQRALSLLASLALLALALALLLQVLAGGPLVYA-LGGWP------APFGIVLva 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 79 DPLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRi 158
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 159 EANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFNIVGLSPSDSITLICLFLFIGAVGKSAQLGLHTWLPDAM- 237
Cdd:COG0651 154 EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYp 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 238 EGPTPVSALIHAAtMVTAGVFLLIRSSPLL---EQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMV 314
Cdd:COG0651 234 AAPSPVSALLSGL-LTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYIL 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 315 MACGL-SQYSIS--LFHLMNHAFFKALLFLSAGSVIHAlADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYS 391
Cdd:COG0651 313 LGLGLgTPLGLAgaLFHLLNHALAKALLFLAAGAIERA-TGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVS 391
|
410 420 430
....*....|....*....|....*....|....*....
gi 2088232037 392 KDLILELAYDQYYLAFAhWLGVFSALLTAAYSLRLVYLT 430
Cdd:COG0651 392 KWLLLQAALEAGAWLLA-AVLLLSSLLTLAYFVRIFGRA 429
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-431 |
4.46e-67 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 238.55 E-value: 4.46e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 1 MYILILLFPFLGSSLSLIT---GRTLGKLGARILTSSCLIVSLSLSVLIFYETTLNFSttyiklWRWLDSdlVTADFGLQ 77
Cdd:PRK12648 2 SLLLLVLLPFLGALLAALLprnARNAEAWLAGLVALAALVLLALLYPAVAAGEVIRAE------IEWLPA--LGLNLSLR 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 78 FDPLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTR 157
Cdd:PRK12648 74 LDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHR 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 158 IEANRAAIKAMLVNRVGDigfvLAMLAiwdqfgclDFVSLFNIVG-------LSPSDSI--------TLICLFLfiGAVG 222
Cdd:PRK12648 154 ADARRGARMALTVTGAGG----LALLA--------GVLLLGHIVGsydldvvLAAGDLIrahplyppALVLILL--GAFT 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 223 KSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVI 302
Cdd:PRK12648 220 KSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLL 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 303 AYSTCSQLGYMVMACGL-SQYSI--SLFHLMNHAFFKALLFLSAGSVIHAlADEQDMRKMGGLIKSIPFSYTMVVIGSLS 379
Cdd:PRK12648 300 AYSTISHLGLITLLLGLgSPLAAvaAIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAAAA 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 2088232037 380 LMGFPYLTGFYSKDLILELAYDQYYLAFAHW----LGVFSALLTAAYSLRLVYLTF 431
Cdd:PRK12648 379 MAGVPLLNGFLSKEMFFAETLDTHLLGSLDWllpvAATLAGAFSVAYSLRFIHDVF 434
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
130-408 |
4.47e-65 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 217.57 E-value: 4.47e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 130 SDNYPQLFIGWEGVGLCSYLLINFWLTRIEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFNIVGLSPSDS- 208
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 209 ITLICLFLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIhAATMVTAGVFLLIRSSPLLEQA-PMALMVVTIVGSLTAF 286
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSsPFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 287 MAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLSQ---YSISLFHLMNHAFFKALLFLSAGSVIHALADEQDMRKMGGLI 363
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTiygIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 2088232037 364 KSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILE--LAYDQYYLAFA 408
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAaaVAASWIFLVLA 286
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
62-448 |
3.21e-64 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 227.49 E-value: 3.21e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 62 WRWLDSDLVTADFGLqfDPLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWE 141
Cdd:PRK12647 48 YAWVPSLGVNLSFLL--DGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWE 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 142 GVGLCSYLLINFWLTRIEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLfnivgLSPSDSIT------LICLF 215
Cdd:PRK12647 126 LTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSEL-----LASGDVIRehplylAILLL 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 216 LFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQ 295
Cdd:PRK12647 201 VLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQ 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 296 NDLKKVIAYSTCSQLGYMVMACGL-SQYSISLF--HLMNHAFFKALLFLSAGSVIHAlADEQDMRKMGGLIKSIPFSYTM 372
Cdd:PRK12647 281 TDLKLILAYSTVSALGTLVMLLGLgSELAIKAAvlFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAA 359
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2088232037 373 VVIGSLSLMGFPYLTGFYSKDLILELAYDQYYLA-FAHWLGVFSALLTAAYSLRLVYLTFisnTNTKKEIFSDAHEG 448
Cdd:PRK12647 360 ALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSlILTVAAVLGNALMVAVAFLVGIKPF---LGKLVETPKHPHEA 433
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
3-396 |
4.03e-60 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 210.22 E-value: 4.03e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 3 ILILLFPFLGSslsLITGRTLGKLGARILTSSCLIVSLSLSVLIFYETTLNFSTTYIKLWRWLDSDLvtadFGLQFDPLT 82
Cdd:PRK06525 5 LLTLLLPFIGA---LVVFFLPGRRAAELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNLGDVAL----FGLVIDPVS 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 83 ATMLLVVTSVSTLVHIFSTAYME-------GDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWL 155
Cdd:PRK06525 78 VLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQ 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 156 TRiEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLdfvSLFNIVGLSPSdSITLICLFLFIGAVGKSAQLGLHTWLPD 235
Cdd:PRK06525 158 SP-KALRSALKALLITHIGSLGLYLAAATLFLQTGTF---ALSALSGLHGS-LKYLVFLGILFAAWGKSAQLPFYSWLPD 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 236 AMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMAL-MVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMV 314
Cdd:PRK06525 233 AMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIgYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMF 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 315 MACGLSQY------SISLFHLMNHAFFKALLFLSAGSVIHALAdEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTG 388
Cdd:PRK06525 313 FGLSLAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSCG-TRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNG 391
|
....*...
gi 2088232037 389 FYSKDLIL 396
Cdd:PRK06525 392 FFSKFPIF 399
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
73-447 |
5.43e-58 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 210.77 E-value: 5.43e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 73 DFGLQFDPLTATMLLVVTSVSTLVHIFSTAYM-EGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLI 151
Cdd:PRK12646 71 NLDLRLDGLSLMFSLIISLIGIAVFFYATQYLsSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 152 NFWLTRIEANRAAIKAMLVNRVGDigfvLAMLAiwdqfgclDFVSLFNIVG-------LSPSDSITLICLFLF------I 218
Cdd:PRK12646 151 SYWYNNGDSQFGAIQSFMITVFGG----LALLV--------GFIMLYIMTGtnniteiLGQADHIKNHGLFIPmifmflL 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 219 GAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDL 298
Cdd:PRK12646 219 GAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 299 KKVIAYSTCSQLGYMVMACGL-------------SQYSIS----LFHLMNHAFFKALLFLSAGSVIHAlADEQDMRKMGG 361
Cdd:PRK12646 299 KGILAYSTISQLGMIMAMVGIgggyaqhqqdaiaSIYVFVlfaaLFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSG 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 362 LIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLIL-------ELA-YDQYYLAFAHWLGVFSALLTAAYSLRLVYLTFIS 433
Cdd:PRK12646 378 MRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLdaltqtgQLSqFSLISMIIIVFIGVIASIFTFTYALYMVKEVFWG 457
|
410
....*....|....
gi 2088232037 434 NTNTKKEIFSDAHE 447
Cdd:PRK12646 458 KYDSKVFTKKNIHE 471
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
62-431 |
4.96e-57 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 209.78 E-value: 4.96e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 62 WRWLDSdlVTADFGLQFDPLTATMLLVVTSVSTLVHIFSTAYM-EGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGW 140
Cdd:PRK12644 58 VPWIPS--LGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFdDDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFW 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 141 EGVGLCSYLLINFWLTRIEANRAAIKAMLVNRVGDigfvLAMLA----IWDQFGCLDFVSLFNIVGLSPSDSITLICLFl 216
Cdd:PRK12644 136 ELTTVLSFLLIGHYAERAASRRAALQALLVTTAGG----LAMLVgiiiLGQAAGTYRLSELLADPPTGPAVSVAVVLIL- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 217 fIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQN 296
Cdd:PRK12644 211 -VGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQH 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 297 DLKKVIAYSTCSQLGYMVMACGLSQYSISLFHL---MNHAFFKALLFLSAGSVIHAlADEQDMRKMGGLIKSIPFSYTMV 373
Cdd:PRK12644 290 DLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVA 368
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2088232037 374 VIGSLSLMGFPYLTGFYSKDLILE-LAYDQYYLAFAHWL---GVFSALLTAAYSLRLVYLTF 431
Cdd:PRK12644 369 ALAAASMAGLPPLLGFVAKEAALEaVLHDGALGPAGPVVlagIVLGSILTVAYSLRFLWGAF 430
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
64-450 |
4.97e-56 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 205.06 E-value: 4.97e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 64 WLDSdlVTADFGLQFDPLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGV 143
Cdd:PRK12649 66 WLPS--AGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELT 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 144 GLCSYLLINFWLTRIEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFN----IVGLSPSDSITLICLFLFIG 219
Cdd:PRK12649 144 SITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQdselIENIKGHPLFLITLILIFIG 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 220 AVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLK 299
Cdd:PRK12649 224 AAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIK 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 300 KVIAYSTCSQLGYMVMACGLSQY-------SISLFHLMNHAFFKALLFLSAGSVIHAlADEQDMRKMGGLIKSIPFSYTM 372
Cdd:PRK12649 304 AILAYSTISQLAYLMTMYGYTTYhepglgvAAATFHLLNHATFKACLFLVAGIVAHE-AATRDIRKLGGLRKEMPITFIV 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 373 VVIGSLSLMGFPYLTGFYSKDLILELAYDQYYLAFAHW------LGVFSALLTAAYSLRLVYLTFISNtNTKKEIFSDAH 446
Cdd:PRK12649 383 ASIAALAMAGIPPLNGFLSKEMFYETSVEMGALIGGPFtiiipaVAVLGGVFTFAYSIKLIDGIFLGE-RTHDHLPHHIH 461
|
....
gi 2088232037 447 EGSW 450
Cdd:PRK12649 462 EAPY 465
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
3-432 |
4.99e-55 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 203.74 E-value: 4.99e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 3 ILILLFPFLGSSLSLITGRTLGKLGARILTSSCLIVSLSL---SVLIFYETTLNFSTTYIklwRWLDSDLVTADFGLQFD 79
Cdd:PRK12650 2 LAVLALAALAVVLAPPLVRVLDRKAGWPLAAIFVAAAGLLlkeLPPILDGDALTWSVTWI---PDLLGNGVDVNLALRAD 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 80 PLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINfwLTRIE 159
Cdd:PRK12650 79 ALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIA--RSGSG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 160 ANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLdfvslfNIVGLSPSDS-------ITLICLFLFIGAVGKSAQLGLHTW 232
Cdd:PRK12650 157 GEAGSIRTLILTFFGGLTLLAAVAIAATQTGTT------SLSGILHSDVwaekpglTTVVAVLIAVAAFTKSAQFPFHFW 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 233 LPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGY 312
Cdd:PRK12650 231 LPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGW 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 313 MVMACGL-SQYSIS--LFHLMNHAFFKALLFLSAGSVIHAlADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGF 389
Cdd:PRK12650 311 IVATIGVgTPFALTaaVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGF 389
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 2088232037 390 YSKDLILELAYDQYYLAFAHWL----GVFSALLTAAYSLRLVYLTFI 432
Cdd:PRK12650 390 VSKEGMLTAFLEAPGGNAGVVLllvgAALGAVFTFAYSARLVLGAFV 436
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
73-431 |
1.80e-52 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 194.68 E-value: 1.80e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 73 DFGLQFDPLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLIN 152
Cdd:TIGR00940 68 NFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLIS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 153 FWLTRIEANRAAIKAMLVNRVGDIGFV--LAMLAIWDQFGCLDFVslfnivgLSPSDSITLICLFLF------IGAVGKS 224
Cdd:TIGR00940 148 YWHHRAHSRYGAQKSLTITVFGGLAMLggLILLGKITGSFSIDAV-------IASADAIRNSPLFGTamvlvlLGAFTKS 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 225 AQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAY 304
Cdd:TIGR00940 221 AQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAF 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 305 STCSQLGYMVMACGLSQYSI----------------SLFHLMNHAFFKALLFLSAGSVIHAlADEQDMRKMGGLIKSIPF 368
Cdd:TIGR00940 301 STISQLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPI 379
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2088232037 369 SYTMVVIGSLSLMGFPYLTGFYSKDLILELAYDQYYL---------AFAHWLGVFSALLTAAYSLRLVYLTF 431
Cdd:TIGR00940 380 TFTLAMIASAAMAGVPPFNGFLSKEMFFAEAITAHLVnpfdtvtlgYLFPYVATVASVFTFVYSLRFIHGVF 451
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
4-429 |
1.29e-51 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 189.74 E-value: 1.29e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 4 LILLFPFLGSSLSL-----ITGRTlGKLGARILTSSCLIVSLSLSVLIFYETtLNFSTTYIkLWRWLDSDLVTADFGLQF 78
Cdd:PRK07390 11 LIPLYGLIGALLSLpwspgIIRRT-GPRPAAYLNLLMTLLAFVHSLLALRAI-WNQPPQQL-SFPWLQVADLDLSLSLEI 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 79 DPLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRI 158
Cdd:PRK07390 88 SPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQP 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 159 EANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFN---IVGLSPSdSITLICLFLFIGAVGKSAQLGLHTWLPD 235
Cdd:PRK07390 168 LVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAwaaTANLDPL-TATLLGLALIAGPTGKCAQFPLHLWLDE 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 236 AMEGPTPVSALIHAAtMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVM 315
Cdd:PRK07390 247 AMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFI 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 316 ACGLSQYSISLFHLMNHAFFKALLFLSAGSVIhALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLI 395
Cdd:PRK07390 326 AVGLQQPDIALLLLLTHAIAKALLFMSVGSII-LTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRL 404
|
410 420 430
....*....|....*....|....*....|....*...
gi 2088232037 396 LELAYDQYYLAFAHWLGVfsaLLTAAYSL----RLVYL 429
Cdd:PRK07390 405 ADGLWAVSPWLVGVLLLV---NALTAFNLtrvfRLVFL 439
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
86-433 |
7.30e-49 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 180.11 E-value: 7.30e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 86 LLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWlTRIEANRAAI 165
Cdd:MTH00095 51 SLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFY-NNWDSNSGAM 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 166 KAMLVNRVGDIgFVLAMLaiwdqFGCLDFVSLFnivgLSPSDSITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSA 245
Cdd:MTH00095 130 NTALTNRIGDF-FIFLFF-----SGFIFSSYYF----FSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSS 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 246 LIHAATMVTAGVFLLIRSSPLLEQApMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLSQYSIS 325
Cdd:MTH00095 200 LVHSSTLVTAGLILLMNFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVS 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 326 LFHLMNHAFFKALLFLSAGSVIHALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILELAYDQYYL 405
Cdd:MTH00095 279 FIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYM 358
|
330 340
....*....|....*....|....*...
gi 2088232037 406 AFAHWLGVFSALLTAAYSLRLVYLTFIS 433
Cdd:MTH00095 359 IFFSLMFFFSVFLTFGYSYRLWKSFFLS 386
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
73-431 |
7.84e-49 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 184.36 E-value: 7.84e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 73 DFGLQFDPLTATMLLVVTSVSTLVHIFSTAYM-EGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLI 151
Cdd:PRK12645 71 NFTLYVDGLSLLFALLITGIGSLVVLYSIYYLsKKKEQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 152 NFWLTRIEANRAAIKAMLVNRVGDI----GFVLAMLAIwdqfGCLDFVSLFNIVGLSPSDSITLICLFLF-IGAVGKSAQ 226
Cdd:PRK12645 151 SYWYEREASRYGAQKSMLITVFGGLsmlgGFILLYIMT----GSFSIREMIANADEIQNSPLFIPAMILIlLGAFTKSAQ 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 227 LGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYST 306
Cdd:PRK12645 227 FPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFST 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 307 CSQLGyMVMAC-GLSQYSI----------------SLFHLMNHAFFKALLFLSAGSVIHALAdEQDMRKMGGLIKSIPFS 369
Cdd:PRK12645 307 VSQLG-LIMSLlGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMIVGIVDHETG-TRDIRKLGGLMTIMPIT 384
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2088232037 370 YTMVVIGSLSLMGFPYLTGFYSKDLILE--LAYDQYYLAFAHWLGVF-------SALLTAAYSLRLVYLTF 431
Cdd:PRK12645 385 FTIALIGALSMAGLPPFNGFLSKEMFFEsmLNATEANLFSLDTWGVLfpviawvASVFTFVYSIIFIFKTF 455
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
62-347 |
8.59e-48 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 176.81 E-value: 8.59e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 62 WRWLDSDLVTADfglqfdPLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWE 141
Cdd:PRK08168 57 AAWPAAAWLEVS------GLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWA 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 142 GVGLCSYLLINFWLTRIEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSL---FNIVGLSPSDSITLICLFLfi 218
Cdd:PRK08168 131 AISLALHRLLCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALwahLAAQGASPSLQAAALLLVL-- 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 219 GAVGKSAQLGLHTWLPDAMEGPTPVSALIHAAtMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDL 298
Cdd:PRK08168 209 AVILKTAQLPVHGWLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISI 287
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2088232037 299 KKVIAYSTCSQLGYMVMACGLSQYSISLFHLMNHAFFKALLFLSAGSVI 347
Cdd:PRK08168 288 KVRLAWSTVAQMGFMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-433 |
4.86e-44 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 166.30 E-value: 4.86e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 3 ILILLFPFLGSSLSLITGRTLGKLGARILTSSclIVSLSLSVLIFYETTLNFSTTYIKLWRWldsdlvTADFG--LQFDP 80
Cdd:PRK12667 11 ILLVLFAFLLPLLSILLKGNRKIQKIYALLVS--LITLILSILLFIQVYSSNKPIVYLFGGW------PAPIGivYEVDL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 81 LTATMLLVVTSVSTLVHIFSTAYMEG-DPHVPRFMSYLSLFTFFMILLVTSDNYpQLFIGWEGVGLCSYLLINFWLTRIE 159
Cdd:PRK12667 83 LGALLGLLTALVMFLILIYSYWYLEHeSGPEWYYTLLLGLEAGMLGILLTGDAF-NLFVMLEVLSISAYGLVAYYRDRGD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 160 ANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFV-------SLFNIVGLSPSDSI---TLICLFLFIGAVG-KSAQLG 228
Cdd:PRK12667 162 AVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMAdlsakirGLSFPLTGGLAGNPplaLGVALALALWAFTiKAAIFP 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 229 LHTWLPDAM-EGPTPVSALIhAATMVTAGVFLLIR--------SSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLK 299
Cdd:PRK12667 242 NHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRflytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVK 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 300 KVIAYSTCSQLGYMVMACGL-SQYSI--SLFHLMNHAFFKALLFLSAGSVIHAlADEQDMRKMGGLIKSIPFSYTMVVIG 376
Cdd:PRK12667 321 RLLAYSTISHMGYIFMGIGIgTQLGLaaALFHIINHAIAKSLLFLASGVFIHA-AGTRDIDELAGLGRKMPIASFAFLIG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2088232037 377 SLSLMGFPYLTGFYSKDLILELAYDQYYLAFAHWLGVFSALLTAAYSlRLVYLTFIS 433
Cdd:PRK12667 400 ALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYF-RAWYSLFFG 455
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-431 |
7.90e-43 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 161.97 E-value: 7.90e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 3 ILILLFPFLGSSLSLITGRTLGKLGARILTSSCLIVSLSLSVLIfyeTTLNFSTTYIKLWRWLdsdlvtADFGLQF--DP 80
Cdd:PRK08375 7 PLLVAVPLLAAALIVLLPKRRRLRWALALLVAALTFALAISLLP---QVLDGGVIAYVVGGWP------PGIGIELraDS 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 81 LTATMLLVVTSVSTLVHIFSTAYmeGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRiEA 160
Cdd:PRK08375 78 LSALFLLVTSILAIAALLYAIGY--GEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR-RA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 161 NRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFNIvgLSPSDSITLICLFLFIGAVGKSAQLGLHTWLPDAMEGP 240
Cdd:PRK08375 155 LAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGA--LAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAA 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 241 TPVSALIHAATMVTAGVFLLIRSS-----PLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVM 315
Cdd:PRK08375 233 PPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILL 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 316 ACGLSQYSI---SLFHLMNHAFFKALLFLSAGSVIHAlADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSK 392
Cdd:PRK08375 313 GLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVT-YGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSK 391
|
410 420 430
....*....|....*....|....*....|....*....
gi 2088232037 393 DLILELAYDQYYLAFAHWLgVFSALLTAAYSLRLVYLTF 431
Cdd:PRK08375 392 WYLVVGAVEAGQWLVLAVL-LASSLLALLYFLRIWYRAF 429
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
72-396 |
4.97e-42 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 162.75 E-value: 4.97e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 72 ADFGLQFDPLTATMLLVVTSVSTLVHIFSTAYM-EGDPHVPRFMS-YLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYL 149
Cdd:PRK06521 72 LPFHLRLDALSAFFLLVISLLGAAASLYSLGYFrEYEGKGPGAMGfFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWF 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 150 LINFWLTRIEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSlFNIVGLSPSDSiTLICLFLFIGAVGKSAQLGL 229
Cdd:PRK06521 152 LVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAA-MRAAHLSPFWA-SLVFLLALFGFGAKAGLVPL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 230 HTWLPDAM-EGPTPVSALIhAATMVTAGVFLLIRSSPLLEQAPMAL--MVVTIVGSLTAFMAATVGLVQNDLKKVIAYST 306
Cdd:PRK06521 230 HVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWWwgVLVLALGAISAVLGVLYALAEHDLKRLLAYST 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 307 CSQLGYMVMACGLSQYSIS--------------LFHLMNHAFFKALLFLSAGSVIHALAdEQDMRKMGGLIKSIPFSYTM 372
Cdd:PRK06521 309 IENIGIIFVGLGLAMVFIAygmpllaalaltaaLYHLLNHALFKSLLFLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWA 387
|
330 340
....*....|....*....|....
gi 2088232037 373 VVIGSLSLMGFPYLTGFYSKDLIL 396
Cdd:PRK06521 388 FLIGCLAISALPPLNGFVSEWLLL 411
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-422 |
9.50e-42 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 159.49 E-value: 9.50e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 4 LILLFPFLGSSLSLITGRtLGKLGARILTSSCLIVSLSLSVLIFYETTLN------FSTTYIKLWRWLDSDLVTADFGLQ 77
Cdd:PRK08376 9 LLIIIPLFGAFSMPIVSL-LGGKAREIWAVLISFLTLIVALLVFYEVWNNgtivyvLGAESPTLTLPFGSGGFPIRIIWE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 78 FDPLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTR 157
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 158 IEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFNIVGLSPSdSITLICLFLFIGAVG-KSAQLGLHTWLPDA 236
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPT-VVAKIALALFIAGLAmKSGAVPVHMWLPDA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 237 M-EGPTPVSALIHAATMvtAGVFLLIRSSPLLEQAPMALM----VVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLG 311
Cdd:PRK08376 247 YpAAPSSISAMLLVIKQ--AGLYALARVLFSIYGPAINLAtvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIG 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 312 YMVMACG----------LSQYSI-----SLFHLMNHAFFKALLFLSAGSVIHALAdEQDMRKMGGLIKSIPFSYTMVVIG 376
Cdd:PRK08376 325 YMLLGLGvglaalgdpaMASYGEialagGIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLARTMPKTTIAFLIG 403
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 2088232037 377 SLSLMGFPYLTGFYSKDLILELAYdqyylAFAHWLGVF----SALLTAAY 422
Cdd:PRK08376 404 AAAIVGLPPFNGFASKWLIYESSA-----LFNPILGVIamigSVLTLASF 448
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
4-445 |
2.94e-37 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 145.99 E-value: 2.94e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 4 LILLFPFLGSSLSLITGRTLGKLgARILTSSCLIVSLSLSVLIFYE-----TTLNFSTTYiklwRWLDSdlVTADFGLQF 78
Cdd:COG1008 8 LLILLPLLGALLLLLLPRRNARL-ARWVALAVSLLTLLLSLYLLAGfdpgtGGFQFVESY----PWIPS--LGISYHLGV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 79 DPLTATMLLVVTSVSTLVHIFSTAYMEgdPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFW--LT 156
Cdd:COG1008 81 DGISLPLVLLTALLTPLAILASWNEIK--KRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggER 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 157 RIeanRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFvSLFNIVGLSPSDSI-TLICLFLFIG-AVgKSAQLGLHTWLP 234
Cdd:COG1008 159 RI---YAAIKFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAqLLLFLAFFIAfAV-KVPMFPFHTWLP 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 235 DA-MEGPTPVSAlIHAATMVTAGVFLLIR-SSPLLEQAPMALM-VVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLG 311
Cdd:COG1008 234 DAhVEAPTAGSV-LLAGVLLKMGGYGLLRfALPLFPEASAYFApLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 312 YMVMACG-LSQYSIS--LFHLMNHAFFKALLFLSAGsVIHALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTG 388
Cdd:COG1008 313 FVLLGIFaLNPLGLQgaVLQMVSHGLITAALFLLVG-VLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSG 391
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2088232037 389 FYSKDLILELAYdQYYLAFAhWLGVFSALLTAAYSLRLVYLTFISNTNTKKEIFSDA 445
Cdd:COG1008 392 FVGEFLVLLGAF-QVNPWLA-ILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDL 446
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
75-431 |
6.61e-35 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 139.18 E-value: 6.61e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 75 GLQFDPLTATMLLVVTSVSTLVHIFSTAYMEGD--PHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLIN 152
Cdd:PRK06589 78 GLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIG 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 153 FWLTRIEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSlfnivGLSPSDSITLICLFLFIGAVGKSAQLGLHTW 232
Cdd:PRK06589 158 HTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVS-----GGLFSKNQSIILLLMFIYGIAKTAIFPVHSW 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 233 LPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSL------TAFMAATVGLVQNDLKKVIAYST 306
Cdd:PRK06589 233 LPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLifipivSIFYSSLKALKTDNIKKILAYST 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 307 CSQLGYMVM-ACGLSQYS--ISLFHLMNHAFFKALLFLSAGSvIHALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGF 383
Cdd:PRK06589 313 ISQLSLALLsAFILTPKAlgAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGI 391
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 2088232037 384 PYLTGFYSKDLILELAYDQ---YYLAFAHWLGVFSALLTAAYSLRLVYLTF 431
Cdd:PRK06589 392 PIFSGFISKFLILLAASEQnqpWLSIIVMLVVIASSILSALYLLKILSSIY 442
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
31-397 |
4.72e-33 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 135.63 E-value: 4.72e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 31 LTSSCLIVSLSLSVLIFYETTLNFSTTYIklwrwldsdLVTADFGLQFDPLTATMLLVVTSVSTLVHIFSTAY---MEGD 107
Cdd:PRK08667 37 LVIAIALLLFAGSLQLFTGNPLDIPLWGI---------APGLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSN 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 108 PHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIEANRAAIKAMLVNRVGDIGFVLAMLAIWD 187
Cdd:PRK08667 108 ERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFI 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 188 QFGCLDFVSLFnivglSPSDSITLICLFLFIGAVGKSAQLGLHTWLPDAMEG-PTPVSALIhAATMVTAGVFLLIR---- 262
Cdd:PRK08667 188 QTGSFELSPLG-----ASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRflmd 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 263 -SSPLLEQApmalMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLsqYSI----------------S 325
Cdd:PRK08667 262 vLSPELWWG----VLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGL--YVIfgvygldtlallalggA 335
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2088232037 326 LFHLMNHAFFKALLFLSAGSVIHALADeQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILE 397
Cdd:PRK08667 336 LFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYE 406
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
76-438 |
7.03e-32 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 130.27 E-value: 7.03e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 76 LQFDPLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYpQLFIGWEGVGLCSYLLINFWL 155
Cdd:PRK08377 74 LYIGPFAALFVLIIAIVSFIMSIFSLKAVEVEPIDKYAMLFLLLMLGATGMIATGDIF-NLFVFMEITAITAYALTAYNK 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 156 TRiEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFNIVG-LSPSDSITLICLFLFIGAVgKSAQLGLHTWLP 234
Cdd:PRK08377 153 TG-EAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGtIDPTVAQVGLALLIFGLAV-EAELFPLNAWAP 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 235 DAMEG-PTPVSALIhAATMVTAGVFLLIRSSPLLEQAP---MALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQL 310
Cdd:PRK08377 231 DAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANgwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQV 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 311 GYMVMACGL---SQYSISLFHLMNHAFFKALLFLSAGSVIHALADEQdMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLT 387
Cdd:PRK08377 310 GMIALALALgtqAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFN 388
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 2088232037 388 GFYSKDLILELAYDQYYLAFAHwLGVFSALLTAAYSLRLVYLTFISNTNTK 438
Cdd:PRK08377 389 VFWSKFRIILAGLSAGYTWPVA-LVLGASVVEAVYYFRLIHTMWFKGEGER 438
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
4-431 |
6.61e-31 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 128.58 E-value: 6.61e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 4 LILLFPFLGSSLSLITGRTLGKLGAriltsscLIVSLSLSVLIFYETTLNFSTTyIKLWrwldsdLVTADFGLQFdplTA 83
Cdd:PRK08668 5 LLLLTPLIGSVLAYLLKKINEKIGV-------IGNALPLLFLIKLYFTLKVGTG-EKLT------LFFGGFKLTF---TL 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 84 TMLLVVTSVSTLVHIFSTAYMegdpHVPRFMSYLSLFTFFMILLVT-------SDNYPQLFIGWEGVGLCSYLLInfWLT 156
Cdd:PRK08668 68 THLSWFFAMISLLVIFSVAFF----MVSEKTKNDAYFNMFALMSLAgvlgvflANDLLTLYIFWEIMTFSSFMMV--PMG 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 157 RIEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFNIVGLSPSDSITLICLFLFIGA-VGKSAQLGLHTWLPD 235
Cdd:PRK08668 142 KKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLINDTSTGFALIVFLFLLAFgVAKAGIFPLHVWAPD 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 236 AM-EGPTPVSALIHAAtMVTAGVFLLIRSSPLLEQAPMALMVVTI------------VGSLTAFMAATVGLVQNDLKKVI 302
Cdd:PRK08668 222 AYsEAPQSFSAVLSGQ-LSKLGAYGFLLVLYVLPGTKLFSEFGTYrgvplfnyilawLGNISIIVGTLMAILQEDIKKLI 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 303 AYSTCSQLGYMVMACGL-SQYSIS--LFHLMNHAFFKALLFLSAGSVIHALAdEQDMRKMGGLIKSIPFSYTMVVIGSLS 379
Cdd:PRK08668 301 AYSSVANGGYILVGLGLgTSLGFAggLFHVFNHALFKGLFFLIFAAVIYRTG-TTKISEMGGLIEKMPFTFAMYLVAIIS 379
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2088232037 380 LMGFPYLTGFYSKDLILELAYDQ--YYLAFAHWLGVFSALLtaaYSLRLVYLTF 431
Cdd:PRK08668 380 LAGIPPMSGFASKWLIFEALISKgmPITAFMAFFGSIGSFL---YVFRPLAGVF 430
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
74-431 |
2.87e-29 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 122.35 E-value: 2.87e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 74 FGLQF--DPLTATMLLVVTSVSTLVHIFSTAYMEGD--------PHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGV 143
Cdd:PRK06458 61 AGLWFfiDDLNVFFLALIGVVGFLTSLYSIGYMRHEvehgelspVTLRLYYGMYQLFLFTMLLALTSNNLGLMWVAIEAT 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 144 GLCSYLLINFWLTRiEANRAAIKAMLVNRVGD----IGFVLAMLA----IWDQFGCLDFVSLFNIVGLSPSDSITLICLF 215
Cdd:PRK06458 141 TLSSALLVGIYRTR-ASLEAAWKYIIICSVGVafalFGTILVYANaatvMGDGEMAILWTELLKHASLLDPTLMKLAFVF 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 216 LFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAgVFLLIRSSPLLEQAPMAL---MVVTIVGSLTAFMAATV 291
Cdd:PRK06458 220 LLIGFGTKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDAAIGSDfpgRLLLIFGLLSVLVAAFF 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 292 GLVQNDLKKVIAYSTCSQLGYMVMACGLSQ---YSISLFHLMNHAFFKALLFLSAGSVIHAlADEQDMRKMGGLIKSIPF 368
Cdd:PRK06458 299 LLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQK-YGTRDINVIRGLLKVSPL 377
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2088232037 369 SYTMVVIGSLSLMGFPYLTGFYSKDLILELAYDQYYLAFAHWLGVFSALLTAAYSLRLVYLTF 431
Cdd:PRK06458 378 TGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVRRVAGMVF 440
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-439 |
1.06e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 114.28 E-value: 1.06e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 3 ILILLFPFLGSSLSLITGRTlgklgaRILTSSCLIVSLSLSVLIFyettlnfSTTYIKLWRWLDSDLVTadfgLQFDPLT 82
Cdd:PRK07234 7 VWIALPFLLGFAIYLLPKLD------RNLALGMAIVSAVYALGLV-------ASMVPLELTLLDNFGVT----LRADALS 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 83 ATMLLVvTSVSTLVHIFSTaymegdphVPRFMSYlSLFTFFMILL------VTSDNYPQLFIGWEGVGLCSYLLINFwlT 156
Cdd:PRK07234 70 GYFILT-NALVTLAVIFYC--------WESAKTR-FFYAQLLILHgsvnaaFVCADLISLYVALEVLSIATFLLVAY--P 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 157 RIEANR-AAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFNivglSPSDSITLIclflFIGAVGKSAQLGLHTWLPD 235
Cdd:PRK07234 138 RTDRAIwVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLAT----ADPEAFALI----ALGLLVKGGIFVSGLWLPL 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 236 AMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQapmALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVm 315
Cdd:PRK07234 210 THSEAEPPVSALLSGVVVKAGVFPLVRCALDVPG---LDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFIL- 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 316 acgLSQYSISLFHLMnHAFFKALLFLSAGsVIHALADEQDMRKMGGLIKSIPfsytmVVIGSLSLMGFPYLTGFYSKDLI 395
Cdd:PRK07234 286 ---AAPLVGGLYALA-HGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKVLT 355
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 2088232037 396 LElaydqYYLAFAHWLGVFSALLTAAYSLRLVYLTFISNTNTKK 439
Cdd:PRK07234 356 LK-----NLLPWQAIALNLAAVGTAASFWKFIFLPFSADDEDKK 394
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
1-441 |
6.71e-26 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 111.75 E-value: 6.71e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 1 MYILILLFPFLGSSLSLITGRTLGKLGARILTSSCLIVSLSLSVLIFYETTLNFSTTYIKLwrwldsdlvtadfgLQFDP 80
Cdd:COG1007 5 LALLPEIILLLGALVLLLLDLFLPRRSRRLLAGLALLGLLLALALLLLALGGGTGTAFGGM--------------FVVDG 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 81 LTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLF-TFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIE 159
Cdd:COG1007 71 FALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFaTLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRR 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 160 ANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFNIVGLSPSDSITLICLFLFIgAVGKSAQLGL---HTWLPDA 236
Cdd:COG1007 151 SSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAALAAGGANSPLLLLGLVLV-LAGLAFKLSAvpfHMWTPDV 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 237 MEG-PTPVSALIHAATMVtAGVFLLIR--SSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYM 313
Cdd:COG1007 230 YEGaPTPVTAFLATAPKI-AAFAALLRllVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYL 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 314 VMA-CGLSQYSIS--LFHLMNHAFFKALLFLSAGSVIHALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFY 390
Cdd:COG1007 309 LLGlAAGTPLGVSaaLFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFF 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2088232037 391 SKDLILELAYDQ--YYLAFahwLGVFSALLTAAYSLRLVYLTFISNTNTKKEI 441
Cdd:COG1007 389 GKFYVFSAAVEAglYWLAV---IAVLNSVISAYYYLRVVKAMYFDEPEEEAPI 438
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-419 |
1.61e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 110.81 E-value: 1.61e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 1 MYILILLFPFLGSSLSLITGRTlgKLGARILTSSCLIVSLSLSVLIFYETTLNfSTTYIKLWRWldsdlvTADFGLQF-D 79
Cdd:PRK07691 5 LVILPILIPVITAILLIFLGKR--PIIQRYVALIGSLLTLVAAIILVANVYKH-GIQTLELGNW------KAPFGIVFvA 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 80 PLTATMLLVVTSVSTLVHIFSTAYMEGdphVPRFMSYLSLFTFFMILLV-----TSDNYpQLFIGWEGVGLCSYLLINFW 154
Cdd:PRK07691 76 DMFAALLVLTSSIITFLVILYSFQTIG---IERERYYYYPSVLFMLAGVngaflTGDIF-NLFVFFEVMLMASYVLIVIG 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 155 LTRIEAnRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFNIVGLSPSDSITLI----CLFLFIGAVgKSAQLGLH 230
Cdd:PRK07691 152 GTKIQL-RESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGLItvvaILFLFVFAT-KAGLFPLY 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 231 TWLPDAMEGP-TPVSALIhAATMVTAGVFLLIRSSPLL--EQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTC 307
Cdd:PRK07691 230 FWLPGSYYAPpIAIAALF-GALLTKVGVYAIARTFTLFfsHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIM 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 308 SQLGYMVMACGL-SQYSI--SLFHLMNHAFFKALLFLSAGSVIHaLADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFP 384
Cdd:PRK07691 309 IAVGVILVGVAMmTESGMigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIP 387
|
410 420 430
....*....|....*....|....*....|....*
gi 2088232037 385 YLTGFYSKDLILELAYDQYYLAFAhWLGVFSALLT 419
Cdd:PRK07691 388 PLSGFYGKFFIVEGTFEAGFYVSG-IIVLLSSLLV 421
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
136-421 |
1.89e-25 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 111.52 E-value: 1.89e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 136 LFIGWEGVGLCSYLLInfWLTRI-EANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFNIVGLSPsdsitlicL 214
Cdd:PRK12668 118 LFVFWELMAFTSTFLV--WARGTkAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGTAA--------W 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 215 FLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPlleqapmALMVVTIVGSLTAFMAATVGLV 294
Cdd:PRK12668 188 LILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFP-------GTELLIYIGAAMAVYGVFFALL 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 295 QNDLKKVIAYSTCSQLGYMVMACGL-SQYSI--SLFHLMNHAFFKALLFLSAGSVIHALAdEQDMRKMGGLIKSIPFSYT 371
Cdd:PRK12668 261 ENDLRRLLSYHIVSQVGYMVAGIGIgTALAIngAVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRSMPLTAL 339
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2088232037 372 MVVIGSLSLMGFPYLTGFYSKDLILELAYDqyylafAHWLGVFSALLTAA 421
Cdd:PRK12668 340 FCLVGALSISAFPLFSGFVSKSMIISAAGE------DHYVWVWLLLLLAS 383
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
31-436 |
3.32e-25 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 110.35 E-value: 3.32e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 31 LTSSCLIVSLSLSVLIFYETTLNFSTTYIKLWRWLdsdlvtadFGLQFDPLTATMLLVVTSVSTLVHIFSTAYMEGDPHV 110
Cdd:MTH00063 4 LVSLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWL--------INFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYAS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 111 PRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTrIEANRAAIKAMLVNRVGDIGFVLamlaiwdqfg 190
Cdd:MTH00063 76 FLLNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFL---------- 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 191 cldFVSLFNIVGLSPSdsitLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLeQA 270
Cdd:MTH00063 145 ---LIGLSCWGGSGSF----LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLL-GF 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 271 PMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLSQYSISLFHLMNHAFFKALLFLSAGSVIHAL 350
Cdd:MTH00063 217 SWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGS 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 351 ADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILELAYDQYY---LAFAHWLGVFsalLTAAYSLRLV 427
Cdd:MTH00063 297 GGSQSSNCVYSSILYGSWNLFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFnvsLLLVVILCVF---LSYLYSFRLC 373
|
....*....
gi 2088232037 428 YLTFISNTN 436
Cdd:MTH00063 374 LILFGVKSS 382
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
4-444 |
3.53e-25 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 109.91 E-value: 3.53e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 4 LILLFPFLGSSLSLITGRTLGKLgARILTSSCLIVSLSLSVLIFYE-----TTLNFSTTYiklwRWLDSdlvtadFGLQF 78
Cdd:PRK05846 8 LLIFLPLIGGLLVLLTERFGARL-ARWIALIGTLLTLLLSLVLWIGfdssnAGFQFVEKH----PWIPR------FGISY 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 79 ----DPLTATMLLVVTSVSTLVHIFSTAymEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFW 154
Cdd:PRK05846 77 hlgvDGISLLLVVLTALLTPLAVLASWE--EIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVW 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 155 --LTRIeanRAAIKAMLVNRVGDIGFVLAMLAIW----DQFGCLDFVSLFNiVGLSPSDSITLICLFLFIGAVgKSAQLG 228
Cdd:PRK05846 155 ggKNRI---YAATKFFLYTLLGSLLMLVAIIYLVvvyyNATGTFDIADLLN-LPLPPGVQYWLFLAFFIAFAV-KMPMFP 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 229 LHTWLPDAM-EGPTPVSaLIHAATMVTAGVFLLIR-SSPLLEQAPMALMVVTIVGSLTA-FMAATVGLVQNDLKKVIAYS 305
Cdd:PRK05846 230 LHTWLPDAHvQAPTAGS-VLLAGILLKMGAYGLLRfSLPLFPDASHEFAPIIITLGVIAiIYGALVALAQTDIKKLIAYS 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 306 TCSQLGYMVMACG-LSQYSIS--LFHLMNHAFFKALLFLSAGsVIHALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMG 382
Cdd:PRK05846 309 SISHMGFVTLGIFaGNQLGIQgaIFQMISHGLSSAALFLLVG-VLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLG 387
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2088232037 383 FPYLTGFYSKDLILELAYdQYYLAFAhWLGVFSALLTAAYSLRLVYLTFISNTNTKKEIFSD 444
Cdd:PRK05846 388 LPGTSGFVGEFLILLGSF-QVNPVIA-FIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKD 447
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
76-431 |
8.54e-24 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 105.29 E-value: 8.54e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 76 LQFDPLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFmsYLSLFTFF-MILLVTSDNYPQLFIGWEGVGLCSYLLINFW 154
Cdd:PRK05777 69 LVVDGFALFLKGLILLASLLALLLARPYLEDRGRGEFY--LLVLFALLgMMVMVSANDLLTLFLGLELLSLPLYALAALR 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 155 LTRIEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFNIVGLSPSDSITLI--CLFLFIGAVGKSAQLGLHTW 232
Cdd:PRK05777 147 RDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALADGSGNSLLLLfgLVFLLVGLAFKLSAVPFHMW 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 233 LPDAMEG-PTPVSALIHAATMVtAGVFLLIRsspLLEQAPMALM-----VVTIVGSLTAFMAATVGLVQNDLKKVIAYST 306
Cdd:PRK05777 227 TPDVYEGaPTPVTAFLATAPKI-AAFAVLLR---LLVVAFGGLSedwqqVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 307 CSQLGYM---VMACGLSQYSISLFHLMNHAFFKALLFLSAGSVIHALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGF 383
Cdd:PRK05777 303 IAHAGYLlvgLAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGI 382
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 2088232037 384 PYLTGFYSKDLILELAYDQYYLAFAhWLGVFSALLTAAYSLRLVYLTF 431
Cdd:PRK05777 383 PPTAGFWGKFYVFEAAVEAGLWWLA-VIGVLNSAIGAFYYLRVIKLMY 429
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
4-431 |
1.44e-23 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 104.64 E-value: 1.44e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 4 LILLFPFLGSSLSLITGRtLGKLGARILTSSCLIVSLSLSVLIFYE---TTLNFSTTYIKLWrwldsdlvTADFGLQF-- 78
Cdd:TIGR01972 3 LLIFLPLIGALLILLLPS-NKDGKARWIALVVALATLLLSLLLLFQfdpTGSGFQFTEDIPW--------IPALGISYhl 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 79 --DPLTATMLLVVTSVSTLVHIFStaYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFW-- 154
Cdd:TIGR01972 74 gvDGISLLLVLLTALLTLLAILAS--WESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWgg 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 155 LTRIeanRAAIKAMLVNRVGDIGFVLAMLAI-WDQFGCLDFVSLFNIVGlsPSDSITLICLFLFIGAVGKSAQLGLHTWL 233
Cdd:TIGR01972 152 PNRI---YAAMKFFLYTLAGSLLMLLAILGLyFLGGGTFDLLELLNLPL--PFGVQTWLFLAFFIAFAVKVPLFPLHTWL 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 234 PDAM-EGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALM-VVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLG 311
Cdd:TIGR01972 227 PDAHvEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFApVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMG 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 312 YMVMAC-GLSQYSIS--LFHLMNHAFFKALLFLSAGsVIHALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTG 388
Cdd:TIGR01972 307 FVLLGIfSFNELGISgaVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSG 385
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 2088232037 389 FYSKDLILELAYDQYYLAFAhwLGVFSALLTAAYSLRLVYLTF 431
Cdd:TIGR01972 386 FVGEFLILLGSFKVNPVVAF--LAALGIVLAAAYMLTLYKRVF 426
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
78-347 |
2.07e-23 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 104.73 E-value: 2.07e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 78 FDPLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTR 157
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGLNKGW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 158 IEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLF---NIVGLSpSDSITLICLFLFIGAVGKSAQLGLHTWLP 234
Cdd:PRK08601 150 KVAREAAKISGMLFLISWLALALAIVWLFIATGEWQLTSVLsneNLAQLG-TWEKTGINLLLILAVMIPAAQWPFQRWLI 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 235 DAMEGPTPVSALIHAAtMVTAGVFLLIRSSPLLEqAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMV 314
Cdd:PRK08601 229 ESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFH-DDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFML 306
|
250 260 270
....*....|....*....|....*....|...
gi 2088232037 315 MACGLSQYSISLFHLMNHAFFKALLFLSAGSVI 347
Cdd:PRK08601 307 VQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
63-430 |
1.09e-18 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 90.01 E-value: 1.09e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 63 RWLdsdlvtADFGLQF--DPLTATMLLVVTSVSTLVHIFSTAYMEGDphVPRFmsylSLFTFFMILLV-------TSDNY 133
Cdd:PRK12663 64 GWL------PPFGIQFtgDSLSALMVTTASFVATAIMAYGFGDIEHS--GRRY----GFPPFILLLMAgvigsflTGDLF 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 134 pQLFIGWEGVGLCSYLLINFWLTRiEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSL-FNIVGLSPSDSITLI 212
Cdd:PRK12663 132 -NLYVWFEVMLIASFVLITLGQER-EQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIaMRLNDMGDTATLTTI 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 213 CLfLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLL-EQAPMAL-MVVTIVGSLTAFMAAT 290
Cdd:PRK12663 210 AL-LFLLAFGMKAALFPFMWLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfPQERELLhPLLATMAAITMVIGAL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 291 VGLVQNDLKKVIAYSTCSQLGYMVMACGL---SQYSISLFHLMNHAFFKALLFLSAGSVIhALADEQDMRKMGGLIKSIP 367
Cdd:PRK12663 289 GALAYKDIRRIAGYQVISSIGFILLGLALgtpAGINGAIFYLVHDMVVKTALFLIAGSLV-RLTGYRSLQYLGGLYRKEP 367
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2088232037 368 FSYTMVVIGSLSLMGFPYLTGFYSKDLILELAYDQyylafAHWLGVFSALLT---AAYSLRLVYLT 430
Cdd:PRK12663 368 LFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDN-----GAYILLALMLITsliTMYSLFRIFFL 428
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-397 |
3.58e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 88.49 E-value: 3.58e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 4 LILLFPFLGSSLSLITGRTLgkLGARILTSSCLIVSLSLSVLIFYETTlNFSTTYIKLWRWLDSDLVTadfgLQFDPLTA 83
Cdd:PRK12665 7 LPVLLPLLAAALTLVLGRRP--RAQRAISLLALSAVLVLSAVLLYLVD-RDGTQAVQLGGWDAPIGIT----LVVDRLSA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 84 TMLLVVTSVSTLVHIFSTA--YMEGDPHVPR--FM-SYLSLFTFFMILLVTSDNYpQLFIGWEGVGLCSYLLINFWLT-- 156
Cdd:PRK12665 80 LMLVVSSVVLLAVLVYAIGqgIRDGDEEQPVsiFLpTYLILVAGVSNAFLAGDLF-NLYVGFEILLVASYVLLTLGATaa 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 157 RIeanRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFNIVGLSPSDSITLICLFLFIGAVGKSAQLGLHTWLPDA 236
Cdd:PRK12665 159 RV---RAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 237 M-EGPTPVSAlIHAATMVTAGVFLLIRSSPLL---EQAPMALMVVTIVGSLTAFMAAtvgLVQNDLKKVIAYSTCSQLGY 312
Cdd:PRK12665 236 YpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLfpgGGLDTLLMVVALLTMVVGILGA---IAQSDIKRLLSFTLVSHIGY 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 313 MVMACGLSQ---YSISLFHLMNHAFFKALLFLSAGsVIHALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGF 389
Cdd:PRK12665 312 MVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGF 390
|
....*...
gi 2088232037 390 YSKDLILE 397
Cdd:PRK12665 391 IGKVALLE 398
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
116-438 |
4.05e-18 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 87.70 E-value: 4.05e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 116 YLSLFTFF-MILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDF 194
Cdd:TIGR01770 106 ILLLFALLgIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNF 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 195 VSLFNIVG-LSPSDSITLICLFLFIGAVG-KSAQLGLHTWLPDAMEG-PTPVSALIHAATMVTA-GVFLLIRSSPLLEQA 270
Cdd:TIGR01770 186 EDLLLFLSnGMLNISLLLLGIVLILVGLLfKLSAVPFHMWVPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFS 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 271 PMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLSQYsISLFHLMNHAFFKALLFLSAGSVIHAL 350
Cdd:TIGR01770 266 EAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTL-EGIKAVLFYIFIYALMSLGAFGVLSLL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 351 ADEQD-----MRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILELAYDQYYLAFAhWLGVFSALLTAAYSLR 425
Cdd:TIGR01770 345 RSYKDewieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLA-VIAVLTSVIGAFYYLR 423
|
330
....*....|...
gi 2088232037 426 LVYLTFISNTNTK 438
Cdd:TIGR01770 424 VVKVMYFDKPERR 436
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
190-396 |
6.96e-17 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 84.04 E-value: 6.96e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 190 GCLDFVSLFNIVGLSPSDSITLICLFLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIhAATMVTAGVFLLIRSSPLLE 268
Cdd:PRK08676 186 GTLNWTELAAHASLLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLR 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 269 Q---APMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLSQ---YSISLFHLMNHAFFKALLFLS 342
Cdd:PRK08676 265 QsgaAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTplaLFWMLFHMLAHSLVKSGLFFS 344
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 2088232037 343 AGsVIHALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLIL 396
Cdd:PRK08676 345 AG-ILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
172-389 |
1.78e-16 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 83.34 E-value: 1.78e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 172 RVGDIGFVLAMLAIWDQFGCLDFVSLFNIVGLSPSDSItlICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAAT 251
Cdd:PRK08042 144 RLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSD--IWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 252 MVTAGVFLLIRSSPLLEQAPMALMVVTIV-GSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLSQYSIS----- 325
Cdd:PRK08042 222 VMKIGLLGILTLSLLGGNAPLWWGVALLVlGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIAleqpa 301
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2088232037 326 ---------LFHLMNHAFFKALLFLSAGSVIHALAdEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGF 389
Cdd:PRK08042 302 lialglvggLYHLLNHSLFKSVLFLGAGSVWFRTG-HRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGF 373
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
64-114 |
1.33e-15 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 71.30 E-value: 1.33e-15
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2088232037 64 WLDSDLVTADFGLQFDPLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFM 114
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-392 |
2.14e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 79.39 E-value: 2.14e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 3 ILILLFPFLGSSL-SLITGRTLgklgARILTSSCLIVSLSLSVLIFYETTLNFSTTYiKLWRWLdsdlVTADFGLQFDPL 81
Cdd:PRK12662 7 ILQVIIPLLSAVVcALLKNRKL----VKIISCIVVAVSFFIALVLFVQVYSGGVIKY-SLGGWG----PPYGIELRVDIL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 82 TATMLLVVTSV---STLVHIFSTAYMEGDPHVPRFMS-YLSLFTFFMILLVTSDNYpQLFIGWEGVGLCSYLLINFWLTR 157
Cdd:PRK12662 78 SATMLVLVNFIavmSVLYGIYPNRKEISVNKIPSFYSaFLLCLGGLLGILVSNDVF-NIYVFLEISSISSYVLVAMGRDK 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 158 iEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFNIVGLSPSDSITLI-CLFLFIGAVGKSAQLGLHTWLPDA 236
Cdd:PRK12662 157 -KALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIgVLFIMVGLFIKAALFPFHKWLIQA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 237 M-EGPTPVSALIhAATMVTAGVFLLIRSSPLLEQAPMALM------VVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQ 309
Cdd:PRK12662 236 YsEAPSFISVFF-SGTSTKVMIYLIIRIVYDVFKANFVFTtlpfnnVFMILAALAIVFGSVLAILSKDIKRIFAYSSISH 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 310 LGYMVMACGLSQYS---ISLFHLMNHAFFKALLFLSAGSVIHALaDEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYL 386
Cdd:PRK12662 315 IGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPT 393
|
....*.
gi 2088232037 387 TGFYSK 392
Cdd:PRK12662 394 SGFVAK 399
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
119-391 |
1.32e-14 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 76.99 E-value: 1.32e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 119 LFTFFMILLVT-------SDNYPQLFIGWEGVGLCSYLLINFWLTRieaNR--AAIKAMLVNRVGDIGFVLAMLAIwdQF 189
Cdd:PRK12561 88 LFYFLMLVLYSaqigvflAQDLLLFFLMWELELVPVYLLISIWGGQ---KRlyAATKFILYTALASIFILVAGLAL--AL 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 190 GCLDFVslFNIVGL---SPSDSITLICLFLFIGAVG-KSAQLGLHTWLPDAM-EGPTPVSalihaatMVTAGVFL----- 259
Cdd:PRK12561 163 SGDTFT--FDLAELgakSYPLALELLLYAGFLIAFGvKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggy 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 260 -LIR------SSPLLEQAP--MALMVVTIV-GSLTAFmaatvglVQNDLKKVIAYSTCSQLGYMVMACG-LSQYSIS--L 326
Cdd:PRK12561 234 aLIRfnvqmlPDAHVYFAPalAILGVVNIIyGALNAF-------AQDNVKRRLAYSSVSHMGFVLLGIAaFTDLGISgaM 306
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2088232037 327 FHLMNHAFFKALLFLSAGSV---IHALAdeqdMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYS 391
Cdd:PRK12561 307 LQMISHGLIAAALFFLTGVTyerTHTLS----IPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
78-399 |
5.04e-14 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 75.07 E-value: 5.04e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 78 FDPLTATMLLVVTSVSTLVHIFSTAymegdphvPRFMSYLSLFTFFMIL-----LVTSDNYPQLFIGWEGVGLCSYLLIn 152
Cdd:PRK06277 70 FNPAKQIIIFVLSLIASLVLITGLG--------EKKSSGLYVFLMLMGLasvsaIVLADDIFNLYVFFEIAAIVQVGLV- 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 153 fWLTRIEAN-RAAIKAMLVNRVG------DIGFVLAMLaiwdqfGCLDFVSLFNIVGLSPSDSITLICLFLFIGAVGKSA 225
Cdd:PRK06277 141 -IASGTEEAyKAALKYMILGNVAgsilllGIGFLLAST------GTLNITDIHNALLVNPTSPVIYGGLLLLIFGLLYGS 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 226 QLG-LHTWLPDAMEGPTP-VSALIHAATMVT--AGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKV 301
Cdd:PRK06277 214 GLPpFHTIKSDIYAKAKPfGSALLQTFSKFVlvALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 302 IAYSTCSQLGYMVMACGL-SQYSIS--LFHLMNHAFFKALLFLSAGSVIHaLADEQDMRKMGGLIKSIPFSYTMVVIGSL 378
Cdd:PRK06277 294 LAYHAISQGGYVAAGLALgTPLGIVagIFHAINHVIYKSALFLGAGIVSY-RTKTSNLRKLGGLLPVMPVVAFMVLCAKL 372
|
330 340
....*....|....*....|.
gi 2088232037 379 SLMGFPYLTGFYSKDLILELA 399
Cdd:PRK06277 373 AISGVPPFNGFQSKLMLAQAA 393
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
422-606 |
7.69e-11 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 61.41 E-value: 7.69e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 422 YSLRLVYLTFISNTNTKKeiFSDAHEGSWNLTLPLILLALGSIFVGYLtkeIIWS-FQITFSPIIPTSIKLMPVIFSLFG 500
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSS--LSPINENNPIMINPIKRLAIGSIIGGSL---LSWLiFPKPPMMTMPLYLKLLALLVTILG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 501 AGAAVVLYHYSSRIFNaptSPVGLAGYTFLYSAWQFNYIINHFLVQNVWRLGHLItYRALDKGIVELIGPQEISKFVITL 580
Cdd:pfam06455 76 LLLGLELSNLSNKQLK---KSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKL-AKQIDQGWSEKFGPQGIAKTLMTL 151
|
170 180
....*....|....*....|....*.
gi 2088232037 581 TQGLSKIQSGLITTYALGFFIALVLL 606
Cdd:pfam06455 152 SKIIQNSQKGLIKIYLLSFLLWLLLL 177
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
86-422 |
1.75e-10 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 63.96 E-value: 1.75e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 86 LLVVTSVSTLVHIFSTAYmegDPHVPRFMsylslftFFMILLVTS--------DNYPQLFIGWEGVGLCSYLLINFWLTR 157
Cdd:PRK07363 84 LLVLNSLLTWIAIYSIGE---NTERPRLY-------YSLILLINGgiagallaQNLLLFFLFYELELIPFYLLIAIWGGE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 158 IEAnRAAIKAMLVNRVGDIGFVLAMLAIwdqfGCLDFVSLFNIVGLSP---SDSITLICLFLFIGAVG-KSAQLGLHTWL 233
Cdd:PRK07363 154 KRG-YASIKFLIYTAVSGLLVLAAFLGI----VWLSGSTSFDYDAISTqnlSLNTQLILLTGLLLGFGiKIPLVPLHTWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 234 PDAMEGPTPVSALIHAATMVTAGVFLLIRSSplLEQAPMALMVVT----IVGSLTAFMAATVGLVQNDLKKVIAYSTCSQ 309
Cdd:PRK07363 229 PDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMVAYSSIGH 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 310 LGYMVMACGLS-QYSI--SLFHLMNHAFFKALLFLSAGsVIHALADEQDMRKMGGL---IKSIPFSYTMVVIGSLSLMGF 383
Cdd:PRK07363 307 MGYILVAAAAGtQLSLlgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLmnpIRGLPLTSALLVLAGMASAGI 385
|
330 340 350
....*....|....*....|....*....|....*....
gi 2088232037 384 PYLTGFYSKDLILELAYDQYylAFAHWLGVFSALLTAAY 422
Cdd:PRK07363 386 PGLVGFVAEFIVFQGSFSTF--PIPTLLCIVASGLTAVY 422
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
1-395 |
2.81e-10 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 63.18 E-value: 2.81e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 1 MYILILLFPFLGSSLSLITGRTLGKLGARILTSSCLIVSLSLSVLIFYE-TTLNFSTTYIKLWRWLDSdlVTADFGLQFD 79
Cdd:PRK06473 1 MLSALIWIPLLGAILIGFWPSGINGKLARSVALVIASVLLLLSLVLAFQfDPGNPNQQFTEFIPWIDS--LGLSYHLGVD 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 80 PLTATmLLVVTSVSTLVHIFSTaymegDPHVPRFMSYLSLftffmILLVTS--------DNYPQLFIGWEGVGLCSYLLI 151
Cdd:PRK06473 79 GLSLP-LLVLNSLLTLIAIYSS-----DESIQRPRFYYSL-----LLLLNAgvsgaflaQDLLLFFLFYELELIPLYLLI 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 152 NFWlTRIEANRAAIKAMLVNRVGdigfvlamlaiwdqfGCLDFVSLFNIVGLSPSDSIT---------------LICLFL 216
Cdd:PRK06473 148 AIW-GGQRRGYAATKFLLYTAIS---------------GILILVSFLGLVWLSGASSFDyeplrshtlplstqlLLLAPI 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 217 FIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIhAATMVTAGVFLLIR-SSPLLEQAPMALM-VVTIVGSLTAFMAATVGL 293
Cdd:PRK06473 212 LVGFGIKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRfGVGLFPEAWVYLApWLATWAVVSVLYGASCAI 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 294 VQNDLKKVIAYSTCSQLGYMVMACGLS-QYSI--SLFHLMNHAFFKALLFLSAGsVIHALADEQDMRKMGGLI---KSIP 367
Cdd:PRK06473 291 AQKDMKKMVAYSSIGHMGYILLAAAAAtPLSIlaAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGLLnpeRGLP 369
|
410 420
....*....|....*....|....*...
gi 2088232037 368 FSYTMVVIGSLSLMGFPYLTGFYSKDLI 395
Cdd:PRK06473 370 ITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
136-437 |
5.42e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 62.25 E-value: 5.42e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 136 LFIGWEGVGLCSYLLINFWLTRIEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFNIVGLSPSDSITLICLF 215
Cdd:MTH00226 156 FYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSEQTQKWIFLG 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 216 LFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFMAATVGLV 294
Cdd:MTH00226 236 IFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATC 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 295 -QNDLKKVIAYSTCSQLGYMVMAcgLSQYSI-----SLFHLMNHAFFKALLFLsagsVIHALADEQDMRKMG---GLIKS 365
Cdd:MTH00226 316 rQIDVKRLVAYSSVAHMGLVSIT--LVTHDIigltgSIFIMLAHGIVSSLLFI----LVTILYDRHHTRLIKyyrGLSIT 389
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2088232037 366 IPFSYTMVVIGSLSLMGFPYLTGFYSKDLILelaydqyyLAFAHWLGVFSALLTAAYSLRLVYLTFISNTNT 437
Cdd:MTH00226 390 MPIWGTIMIVTSLANVAVPPSGNFIGEYLSI--------LSSFNWNPIIGVFVCSGVILSAVYSFYFANRVT 453
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
137-426 |
1.68e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 60.85 E-value: 1.68e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 137 FIGWEGVGLCSYLLINFWLTRIEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFNIVglSPSDSITLICLFL 216
Cdd:MTH00204 138 YILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIK--LPLSIQKWLLVGF 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 217 FIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLTAFM-AATVGLV 294
Cdd:MTH00204 216 FLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIyGSLTTCR 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 295 QNDLKKVIAYSTCSQLGYMVMacGLSQYSI-----SLFHLMNHAFFKALLFLsAGSVIHALADEQDMRKMGGLIKSIPFS 369
Cdd:MTH00204 296 QVDFKRLIAYSSVAHMGLVPL--GLFTHTIeglvaAVFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLF 372
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2088232037 370 YTMVVIGSLSLMGFPyLTGFYSKDLILELAYDQYYLaFAHWLGVFSALLTAAYSLRL 426
Cdd:MTH00204 373 VIIMLVLSLANMGFP-LSCNFVGEFFSLLAAFEYSL-GLGVLVTSGMVWSAAYSLYL 427
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
92-404 |
3.53e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 59.80 E-value: 3.53e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 92 VSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFF-MILLVTSDNYPQLFIGWEGVGLCSYLLInfWLTRiEANRAAIKAMLV 170
Cdd:PRK06459 52 ISTIVWILASLYSIEYDHYGKWLSSLYILTILgMAIVLTSDNYLLFLAGWEIMTIPSYVAI--ALTK-KNKRPAFVFMAF 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 171 NRVGDIGFVLAMLAIWDQFGCLDFVSLFNIVGLspsdsitLICLFLFIGAVGKSAQLgLHTWLPDAMEGPTPVSALIHAA 250
Cdd:PRK06459 129 GELSTVLILAGFAWAFIISGTTNFSYLPSPVPL-------ILASFGFIIKMGMMPFL-VSEWLPIAHGNAPSNFSAILSA 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 251 TMVTAGVFLLIRSSPLLEQAPMAL--MVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGL------SQY 322
Cdd:PRK06459 201 TMTLMGVYGILKMTILTQTIPIGYfgLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymvtkqLIT 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 323 SISLFHL-------MNHAFFKALLFLSAGSVihaladeqdmRKMGGLIKSIPFSYTMV---VIGSLSLMGFPYLTGFYSK 392
Cdd:PRK06459 281 SIEHFSLitvilysFAHSVAKTGLFLSSGLQ----------EKQSITYSKKIRNRWIElglTLLASSLSGLLPNIGGVAS 350
|
330
....*....|..
gi 2088232037 393 DLILELAYDQYY 404
Cdd:PRK06459 351 WLLLESLFMFAY 362
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
229-439 |
9.99e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 57.62 E-value: 9.99e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 229 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEqapmaLMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCS 308
Cdd:MTH00070 111 FHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLN-----SNLLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 309 QLGYMVMACG----LSQYSISLFHLMNHAFFKALLFLSAgsvihaladeQDMRKMG-GLIKSIPFSYTMVVIgSLSLMGF 383
Cdd:MTH00070 186 HLGWMIIILTfsphLTLLNLLIYLIMTSSMFLMLMNLNS----------TNINKLSsSWSKNPTLTSMMMLT-LLSLGGL 254
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2088232037 384 PYLTGFYSKDLILELAYDQYYLAFAHwLGVFSALLTAAYSLRLVY---LTFISNTNTKK 439
Cdd:MTH00070 255 PPTTGFIPKWLILQELTKQNLTTLAT-LMALSALLSLFFYLRLSYamsLTTSPNTSNSK 312
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
61-437 |
1.89e-08 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 57.32 E-value: 1.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 61 LWRWLDSDLVTADFGLQFDPLTATMLLVVTSVSTLVHIFSTAYME-GDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIG 139
Cdd:CHL00049 60 LFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAITEFLLFVLTATLGGMFLCGANDLITIFVA 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 140 WEGVGLCSYLLINFWLTRIEANRAAIKAMLVNRVGD----IGFVL------AMLAIWDQFGCLDFVSLFNivglSPSDSI 209
Cdd:CHL00049 140 LECLSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSsilvYGFSWlyglsgGEIELQEIVNGLINTQMYN----SPGISI 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 210 TLICLFLFIGAvgKSAQLGLHTWLPDAMEG-PTPVSALIHAATMVtAGVFLLIRSS----PLLEQAPMALmvVTIVGSLT 284
Cdd:CHL00049 216 ALIFITVGIGF--KLSLAPFHQWTPDVYEGsPTPVVAFLSVTSKV-AASALATRIFdipfYFSSNEWHLL--LEILAILS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 285 AFMAATVGLVQNDLKKVIAYSTCSQLGYMV--MACGLSQYSIS------LFHL-MN-HAFFKALLF-LSAGSvihalade 353
Cdd:CHL00049 291 MILGNLIAITQTSMKRMLAYSSIGQIGYVIigIIVGDSNDGYAsmitymLFYIfMNlGTFACIVLFgLRTGT-------- 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 354 QDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKdLILELAYDQYYLAFAHWLGVFSALLTAAYSLRLVYLTFIS 433
Cdd:CHL00049 363 DNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK-LYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTG 441
|
....
gi 2088232037 434 NTNT 437
Cdd:CHL00049 442 RNQE 445
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
124-437 |
3.79e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 56.19 E-value: 3.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 124 MILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIEANRAAIKAMLVNRVGDiGFVLAMLAIWDQFGCLDFVSLFNIV-- 201
Cdd:MTH00196 6 ILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSS-GLFLFGCALLCGTTGGLHLSYINLVln 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 202 -GLSPSDSITLICLFLFIGAV-GKSAQLGLHTWLPDAMEG-PTPVSALIhaATMVTAGVFLLIRSSPLleqapmALMVVT 278
Cdd:MTH00196 85 sGQSFSSVSVPIGYLLIIVALlFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFSILVSIGL------NVNILL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 279 IVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLSQY---SISLFHLMNHAFFKALLFlsagSVIHALADEQD 355
Cdd:MTH00196 157 IGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFesiQASLVYLFIYIIMSICVF----SIILALNVYKN 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 356 MR-KMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLI-LELAYDQYYLAFAhwLGVFSALLTAAYSLRLVYLTFIS 433
Cdd:MTH00196 233 LIiEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIlLSGVVYQYYLIFL--LAVFCSVIAGVYYVRIVKILFFQ 310
|
....
gi 2088232037 434 NTNT 437
Cdd:MTH00196 311 ANSF 314
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
229-439 |
1.56e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 54.06 E-value: 1.56e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 229 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQapmalMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCS 308
Cdd:MTH00112 111 FHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNP-----TLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 309 QLGYMV----MACGLSQYSISLFHLMNHAFFKALLFLSAGSvihaladeqdMRKMGGLIKSIPFSYTMVVIGSLSLMGFP 384
Cdd:MTH00112 186 HLGWMIaiitYSPKLTLLTFYIYILMTTPMFLTLNTTSTKT----------LKDMMTSWTKSPTLNTTLMLTLLSLAGLP 255
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2088232037 385 YLTGFYSKDLILELAYDQYYLAFAHWLGVFSaLLTAAYSLRLVYLTFI----SNTNTKK 439
Cdd:MTH00112 256 PLTGFMPKWLILQELTKQNMTPTATIMAMLS-LLSLFFYLRLTYISTItlppNTTNMMM 313
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
79-314 |
2.37e-07 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 53.98 E-value: 2.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 79 DPLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRI 158
Cdd:MTH00014 58 DMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQP 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 159 EANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLdfvSLFNIVGLSPSDSITLICLFLFIGA-VGKSAQLGLHTWLPDA- 236
Cdd:MTH00014 138 ERLQASFYLMIYTVTASLPLLMSILLIFYTNNSL---SMLMSSMEPPSIYLMNLWWLITILAfMVKMPLYTVHLWLPKAh 214
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2088232037 237 MEGPTPVSaLIHAATMVTAGVFLLIRSSPLLEQAPMALMVVTIVGSLT-AFMAATVGLVQNDLKKVIAYSTCSQLGYMV 314
Cdd:MTH00014 215 VEAPVAGS-MILAGILLKLGGYGLLRMSSLFMHINKSLSAPFSSISLVgAVITSLICIRQPDLKSLIAYSSVGHMGLMT 292
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
194-433 |
2.47e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 53.35 E-value: 2.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 194 FVSLFNIVGLSPSDSITLICLFLFIGAVGksaqlgLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLirssPLLEQAPMA 273
Cdd:MTH00144 74 SLIMYNLSFSWFSMSLLLLGLCLKLGLFP------FHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLL----SNFLDLYWL 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 274 LMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACgLSQYSISLFHLMNHAFFKALLFLSAGSvihalADE 353
Cdd:MTH00144 144 AYLLCVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAI-LHGSWLMWMYFLIYIVSSGFLFFSLWS-----GDS 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 354 QDMRKMGGLIKSIPFSYTMVVIGsLSLMGFPYLTGFYSKDLILelaydQYYLAFAHWLGVFSALLTAAYSLrLVYLTFIS 433
Cdd:MTH00144 218 GSMKDLGSLKPSYKTGLSIISLL-LSLGGLPPFLGFCSKLLVL-----ISSMESSPLLLILLLLLGSLISL-FFYLSVFF 290
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
89-410 |
2.75e-07 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 53.90 E-value: 2.75e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 89 VTSVSTLVHIF-STAYME--GDPhVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIEANRAAI 165
Cdd:PRK02504 86 IIALSTLVTLLmSWRYVEqsGTP-LGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAAL 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 166 KAMLVNRVGDIGFVLAMLAIWDQFG---CLDFVSLFNIVGLSPSDSITLIclFLFIGAVGKSAQLGLHTWLPDAMEG-PT 241
Cdd:PRK02504 165 KYLLIGAASSAIFLYGSSLLYGLSGgstQLSAIALALITSPSLGLALALV--FVIAGIAFKISAVPFHQWTPDVYEGsPT 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 242 PVSALIHAATMvTAGVFLLIRsspLLEQAPMAL-----MVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMV-- 314
Cdd:PRK02504 243 PVVAFLSVGSK-AAGFALAIR---LLVTAFPSFdeqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMig 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 315 MACGLSQ-YSISLFHL-----MN-HAFFKALLF-LSAGSvihalaDEqdMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYL 386
Cdd:PRK02504 319 LVAGTEAgYASMVFYLlaylfMNlGAFACVILFsLRTGT------DQ--ISDYAGLYQKDPLLTLGLSLCLLSLGGIPPL 390
|
330 340
....*....|....*....|....
gi 2088232037 387 TGFYSKdlilelaydqYYLAFAHW 410
Cdd:PRK02504 391 AGFFGK----------IYLFWAGW 404
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
31-430 |
2.90e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 53.42 E-value: 2.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 31 LTSSCLIVSLSLSVLIFYETTLnfsttyiklWRWLDSDLVTadfglqfDPLTATMLLVVTSVSTLVHIFSTAYMEGDPhV 110
Cdd:MTH00127 28 LAHSLLIALASLTWLKNLSETG---------WSSLNLYMAT-------DPLSTPLLVLTCWLLPLMILASQNHTAPEP-I 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 111 PRFMSYLSLFT---FFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIEANRAAIKAMLVNRVGDIGFVLAMLAIWD 187
Cdd:MTH00127 91 NRQRMYITLLTslqIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQN 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 188 QFGCLDFVSLFNIVGLSPSDSITLI----CLFLFIGavgKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRS 263
Cdd:MTH00127 171 STGTLSMLTLQYSQPLQLSSWADKLwwagCLLAFLV---KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRM 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 264 SPLLEQAPMALMVVTIVGSL-TAFMAATVGLVQNDLKKVIAYSTCSQLGyMVMACGLSQ----YSISLFHLMNHAFFKAL 338
Cdd:MTH00127 248 MVMLDPLTKELSYPFIILALwGIIMTGSICLRQTDLKSLIAYSSVSHMG-LVAGGILIQtpwgFTGALILMIAHGLTSSA 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 339 LFLSAGSViHALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILELAYDQYYLAFAhwLGVFSALL 418
Cdd:MTH00127 327 LFCLANTN-YERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLA--LTGLGTLI 403
|
410
....*....|..
gi 2088232037 419 TAAYSLRLVYLT 430
Cdd:MTH00127 404 TAGYSLYMFLMT 415
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
189-437 |
4.94e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 52.28 E-value: 4.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 189 FGCLDFVSLFNIVGLSPSDSITLICLFLFIGAVgKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLE 268
Cdd:MTH00200 72 FGGLLNAWTSGQWGISEMLGPLSETLILLALAL-KLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALN 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 269 qapmaLMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLSqysiSLFHLMNhaFFKALLFLSAGSVIH 348
Cdd:MTH00200 151 -----SNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS----PNLALLY--LLLYVIITLTVFLLL 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 349 ALADEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILELAYDQYYLAFAHWLgVFSALLTAAYSLRLVY 428
Cdd:MTH00200 220 NLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATIL-LLGSLLSLFFYLRLSY 298
|
....*....
gi 2088232037 429 LTFISNTNT 437
Cdd:MTH00200 299 LTLLTLSPN 307
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
137-391 |
1.14e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 51.63 E-value: 1.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 137 FIGWEGVGLCSYLLINFWLTRieaNR--AAIKAMLVNRVGDIGFVLAMLAIwDQFGclDFVSlFNIVGLSPSDSITLICL 214
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWGGK---KRqyAATKFILYTAGSSLFILLAALAM-AFYG--DTPT-FDMTALAAKDFGLGFQL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 215 FLFIG---AVG-KSAQLGLHTWLPDAM-EGPTPVSALIhAATMVTAGVFLLIRSSPLLEQAPMALM--VVTIVGSLTAFM 287
Cdd:PRK02546 214 LCYAGlliAYGvKLPIVPLHTWLPDAHgEATAPVHMLL-AGILLKMGGYALLRMNAGMLPDAHAQFapLLIVLGVVNIIY 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 288 AATVGLVQNDLKKVIAYSTCSQLGYMVMACG-LSQYSIS--LFHLMNHAFFKALLFLSAGSV---IHALAdeqdMRKMGG 361
Cdd:PRK02546 293 AALTSFAQRNLKRKIAYSSISHMGFVLIGIGsFTDLGTSgaMLQMISHGLIGASLFFLVGATydrTHTLM----LDEMGG 368
|
250 260 270
....*....|....*....|....*....|
gi 2088232037 362 LIKSIPFSYTMVVIGSLSLMGFPYLTGFYS 391
Cdd:PRK02546 369 VGQKMRKMFAMWTACSLASLALPGMSGFVA 398
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
215-395 |
1.54e-06 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 51.48 E-value: 1.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 215 FLFIGAVgKSAQLGLHTWLPDamegpTPVSAliHAAT-MVTAGVFL------LIRSSplLEQAPMALMV----VTIVGSL 283
Cdd:CHL00011 217 FLIAYAV-KLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLIRIN--MELLPHAHSIfspwLVIVGAI 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 284 TAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGlsqySIS-------LFHLMNHAFFKALLFLSAGSV---IHALADE 353
Cdd:CHL00011 287 QIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIG----SITdtglngaILQIISHGFIGAALFFLAGTSydrIRLVYLD 362
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 2088232037 354 QdmrkMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLI 395
Cdd:CHL00011 363 E----MGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIV 400
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
108-398 |
2.49e-06 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 50.16 E-value: 2.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 108 PHVPRFMSYLSLFTffmILLVTSDNYPQLFIGWEgVGLCSYLLINFWLTRIEANRAAIKAMLVNRVGDIGFVLAMLAIWd 187
Cdd:MTH00011 6 PTMFLFSSTMTLGT---LMALSSNNWLFLWMGME-LNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMW- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 188 qfgcldfvslfnivgLSPSDSITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPll 267
Cdd:MTH00011 81 ---------------SFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTS-- 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 268 eQAPMALMvvTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACgLSQYSISLFHLMNHAFFKALLFLSAGSVi 347
Cdd:MTH00011 144 -HNILPMM--TSMAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMIS-VFSPSMAILYFMTYIIITTPLMLLFAYL- 218
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2088232037 348 halaDEQDMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILEL 398
Cdd:MTH00011 219 ----NAFSTKFNSKISSMSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIET 265
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
280-441 |
2.88e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 50.50 E-value: 2.88e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 280 VGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLS-----QYSISLFHLMNHAFFKALLFLSAGSVIHALAdEQ 354
Cdd:PRK12664 207 LGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSgssgvAIGILILQIVLSVVYQTLLFMVADSVINRTR-KF 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 355 DMRKMGGLIKsIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILEL--AYDQYYLAFAHWLGVFSALLTAAYSLRLVYLTFI 432
Cdd:PRK12664 286 NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSidTAGLTLVLYKKLFLICSLLLFASVGLKFFWYAFI 364
|
....*....
gi 2088232037 433 SNTNTKKEI 441
Cdd:PRK12664 365 SKSKSKPEA 373
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
229-437 |
3.10e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 49.80 E-value: 3.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 229 LHTWLPDAMEGPTPVSALIhAATMVTAGVFLLIrssplLEQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCS 308
Cdd:MTH00135 111 LHFWLPEVLQGLDLTTGLI-LSTWQKLAPFALI-----LQIAPTNPTLLITLGLTSTLVGGWGGLNQTQLRKILAYSSIA 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 309 QLGYMVMacgLSQYSISL-------FHLMNHAFFKALLFLSAGSvIHALAdeqdmrkMGGLIKSIPFSYTMVVIgsLSLM 381
Cdd:MTH00135 185 HLGWMIL---VLQFSPSLtllalltYIIMTSSAFLTFKLNSSTK-INTLA-------TSWTKAPALTALTPLIL--LSLG 251
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 382 GFPYLTGFYSKDLIL-ELAYDQyyLAFAHWLGVFSALLTAAYSLRLVY---LTFISNTNT 437
Cdd:MTH00135 252 GLPPLTGFMPKWLILqELTKQD--LPLTATLAALSALLSLYFYLRLSYamtLTISPNTLN 309
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
114-443 |
1.11e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 48.13 E-value: 1.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 114 MSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIEaNRAAIKAMLVNRVGDIGFVLAMLAiwdqfgcld 193
Cdd:MTH00197 1 FLFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITE-NEGAMKYFLFQEFGSALLLMGGSL--------- 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 194 fvSLFNIVGLSPSDSITLICLFLFIGAVGksaqlgLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLeqapma 273
Cdd:MTH00197 71 --SFSNLYLSLLSVVLVILGLLLKLGAFP------FHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSF------ 136
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 274 lMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLSQySISLFHLMNHAFFKALLFLsagsvihALADE 353
Cdd:MTH00197 137 -MGLLICSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSP-SIFMLYYLIYFVIMFMLFL-------FLSKN 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 354 QDMRKMGGLIKSIPFSYTMVVIGS--LSLMGFPYLTGFYSKDLILELAydqyyLAFAHWLG----VFSALLTAAYSLRLV 427
Cdd:MTH00197 208 NLSSLNQQYSNPESMSSNLVFLGLsfLSLGGLPPLSGFFLKWLILTSL-----LSSNISLItfmlILSTCFSLYYYLSLA 282
|
330
....*....|....*.
gi 2088232037 428 YLTFISNTNTKKEIFS 443
Cdd:MTH00197 283 YKSLILSNWMINFLMK 298
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
3-314 |
1.14e-05 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 48.43 E-value: 1.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 3 ILILLFPFLGSSLSLITGRTlgKLGARILTSSCLIVSLSLSVlifyettlnFSTTYIKLWRWLDSDLVTadfglqfDPLT 82
Cdd:MTH00044 2 ITLILLSLGIAITSWIVPKN--KLWPISISQSSLISLLSLFL---------LNNHWSSSWHNLSLSLAT-------DSLS 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 83 ATMLLVVTSVSTLVHIFSTAYMEGDPHVPR--FMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIEA 160
Cdd:MTH00044 64 SPLIILSCWLAPLSLLASINHLSNNSPNNQrtFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKER 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 161 NRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSL-FNIVGLSPSDSITLICLFLFIGAVGKSAQLGLHTWLPDA-ME 238
Cdd:MTH00044 144 IQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSeLNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVE 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 239 GPTPVSaLIHAATMVTAGVFLLIR-----SSPLLEQAPMALMVVTIVGSLtafMAATVGLVQNDLKKVIAYSTCSQLGYM 313
Cdd:MTH00044 224 APVAGS-MILAAILLKLGGYGLIRlinlfSLPSANNISFILIVFCCWGAL---ITSIICLRQTDLKALIAYSSVGHMSLV 299
|
.
gi 2088232037 314 V 314
Cdd:MTH00044 300 A 300
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
74-450 |
2.45e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 47.24 E-value: 2.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 74 FGLQFDPLTATMLLVVTSVSTLVHIFSTAYMEGDPHVPR--FMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLI 151
Cdd:MTH00206 53 LYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEPINRQriYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLI 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 152 NFWLTRIEANRAAIKAMLVNRVGdiGFVLAMLAIWDQFGCLDFVSLFNIVGLSPSDSITLICLFLFIGAVGKSAQLGLHT 231
Cdd:MTH00206 133 TRWGNQKERLNAGYYFLFYTLIG--SLPLLIALLFLQNSLGSLSLYILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 232 WLPDA-MEGPTpvsalihAATMVTAGVFL------LIRSSPLL-EQAPMALMVVTIVGSLTAFMAATVGLVQNDLKKVIA 303
Cdd:MTH00206 211 WLPKAhVEAPV-------AGSMVLAGVLLklggygMMRIILILgPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIA 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 304 YSTCSQLGYMVMACgLSQYSISL---FHLM-NHAFFKALLFLSAGSV---IHAladeQDMRKMGGLIKSIPFSYTMVVIG 376
Cdd:MTH00206 284 YSSVSHMSLVTAGI-LSGSPWGFkgaLLLMiAHGLVSSALFCLANLLyerSHT----RTILGNRGLQMILPLLSFWWLLF 358
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2088232037 377 SLSLMGFPYLTGFYSKDLILELAYDQYYLAFahWLGVFSALLTAAYSLRLVYLTFISNTNTKKEIFSDAHEGSW 450
Cdd:MTH00206 359 FLANLGLPPFPNLFGELLIITSLFSWSNFTL--PLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREH 430
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
228-317 |
3.59e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 46.73 E-value: 3.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 228 GLHTWLPDAMegptpVSALIhAATMVTAGVFL------LIRSSPLLEQAPMALMVVTIVGSL-TAFMAATVGLVQNDLKK 300
Cdd:MTH00124 211 GLHLWLPKAH-----VEAPI-AGSMVLAAILLklggygIIRITLLLPPLSNTLHYPFLTLALwGALMTSLICLRQTDLKS 284
|
90
....*....|....*..
gi 2088232037 301 VIAYSTCSQLGYMVMAC 317
Cdd:MTH00124 285 LIAYSSVSHMGLVIAAT 301
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
195-397 |
5.94e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 42.61 E-value: 5.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 195 VSLFNIVGLSPSDSITLICLFLFIGAVGksAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLLEQAp 271
Cdd:MTH00041 76 IQAWLSGSWSINGPLNTLSSIIITLALA--LKLGLapcHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSN- 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 272 malmVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLSQYsISLFHLMNHAFFKALLFLSA--GSVIHa 349
Cdd:MTH00041 153 ----ILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPN-ASIIMFLIYIIINTSIFLIGnnFSLST- 226
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2088232037 350 ladeqdMRKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILE 397
Cdd:MTH00041 227 ------LSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLY 268
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
111-439 |
6.92e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 42.50 E-value: 6.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 111 PRFMSYLSLFTFFMILLVTSDNYPQLFIGWEgVGLCSYLLINFWLTRIEANRAAIKAMLVNRVGDIGFVLAMLaiwdqfg 190
Cdd:MTH00160 5 SSKLLFLSTLIMGTLISISSNSWFGAWMGLE-INLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSII------- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 191 cldFVSLFNIVGLSPSDSITLICLFLFIGAVGksaqlgLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSsplleqa 270
Cdd:MTH00160 77 ---LNMLNLMLFNNISSMLINSSLLLKLGAAP------FHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL------- 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 271 pMALMVVTIVGSLTAFMAATVGLVQNDLKKVIAYSTCSQLGYMVMACGLSQ---------YSISLFHLMNHAFFKALLFL 341
Cdd:MTH00160 141 -INNNFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISEnlwliyfliYSIISLSIILLFNKFNIFFL 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 342 SagsvihaladeqdmrKMGGLIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLILELAYDQYYLAFAHWLgVFSALLTAA 421
Cdd:MTH00160 220 N---------------QLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFIL-IMSSLITLY 283
|
330
....*....|....*...
gi 2088232037 422 YSLRLVYLTFISNTNTKK 439
Cdd:MTH00160 284 FYLRISYSSLMLNYNKNK 301
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
214-396 |
7.71e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 42.92 E-value: 7.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 214 LFLFIGAVGKSAQLGLHTWLPDAMEG-PTPVSALIHAATMVTAGVFL--LIRSSPLLEQAPMALMVVTIVGSLTafmaat 290
Cdd:MTH00198 303 LFITVAILFKLAAAPFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLtsLVITSKLLLSVAIISLVVGAFGALN------ 376
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 291 vglvQNDLKKVIAYSTCSQLGYMVMACGLSQYS--------ISLFHLMNHAFFKALLFLSAGSVIHALADEQDMRKMGG- 361
Cdd:MTH00198 377 ----QTRIKRLLAYSGIGHIGFILIGVSAGTYEslqaswtyAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGSFGNYn 452
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 2088232037 362 ----------LIKSIPFSYTMVVIGSLSLMGFPYLTGFYSKDLIL 396
Cdd:MTH00198 453 lvrrlvdltiLSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
30-316 |
1.11e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 42.21 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 30 ILTSSCLIVSLSLSVLIFYETTLNFSTTYiklwrwldsdlvtadFGLqfDPLTATMLLVVTSVSTLVHIFSTAYMEGDPH 109
Cdd:MTH00068 27 TTTNSLIIAFLSLMWFNLPSETMNFTNKY---------------FGI--DQISSPLLILTCWLLPLMILASQNHLKNEPI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 110 vPRFMSYLSLFTFF---MILLVTSDNYPQLFIGWEGVGLCSYLLINFWLTRIEANRAAIKAMLVNRVGDIGFVLAMLAIW 186
Cdd:MTH00068 90 -NRQRTYISMLIILqltLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQ 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 187 DQFGCLdfvSLFNIVGLSPSDSIT-------LICLFLFIGavgKSAQLGLHTWLPDAMegptpVSALIhAATMVTAGVFL 259
Cdd:MTH00068 169 NSLGSL---SLILLELMSPMQLMTytnkiwwLACLLAFMV---KMPLYGLHLWLPKAH-----VEAPI-AGSMILAAVLL 236
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2088232037 260 ------LIRSSPLL----EQAPMALMVVTIVGSLtafMAATVGLVQNDLKKVIAYSTCSQLGYMVMA 316
Cdd:MTH00068 237 klggygILRISILLtplsKELSYPFIILALWGVL---MTSLICLRQTDLKSLIAYSSVSHMGLVIAA 300
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
1-315 |
2.00e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 41.19 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 1 MYILILLFPFLGSSLSLITGR-TLGKLGARILTSSCLIVSLSLSVLIFYETTLNFSTtyIKLWRWL---DSDLVTADFGL 76
Cdd:MTH00217 1 MLELVFILPLIGILHLLIIPRdNIVRLKKIALEWSLLTLTATILLWASFDGEGQFQA--IKKFEWIpgiEPVFGPVVFAV 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 77 Q-----FDPLTAtmllVVTSVSTLVHIFSTAYMegdphVPRFMSYLSLFTFFMILLVTSDNYPQLFIGWEGVGLCSYLLI 151
Cdd:MTH00217 79 DgisifFLILTA----LLTPICILISWNSIKFL-----IKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLII 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 152 NFWLTRIEANRAAIKAMLVNRVGDIGFVLAMLAIWDQFGCLDFVSLFNIvgLSPSDSITLICLFLFIGAVGKSAQLGLHT 231
Cdd:MTH00217 150 GIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCL--KIEKELQYFIFLGFFLSLAIKIPKIPFHI 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2088232037 232 WLPDA-MEGPTPVSALIhAATMVTAGVFLLIRSS-PLLEQA-----PMAL---MVVTIVGSLTAFMaatvglvQNDLKKV 301
Cdd:MTH00217 228 WLPQAhVEAPVAGSVIL-AGVLLKLGGYGFIRFSwPLLPEAseyfsPLIQtlsLLAIIYGSLTTCR-------QVDLKRI 299
|
330
....*....|....
gi 2088232037 302 IAYSTCSQLGYMVM 315
Cdd:MTH00217 300 IAYSSVAHMGLVTL 313
|
|
| |
