|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
1-598 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 1110.69 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 1 MNMFSSLILTSLVTLLFPIFLTMSDYHKHVNYPNYVKISIICALSFCMVPTLMFINSNYELIISNWHWMTIQTFTLSMSF 80
Cdd:MTH00108 1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 81 KLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00108 81 KLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 161 RTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLFMMDVSLFPLLGL--LLAATGKSAQFGLHPWLPSAMEGP 238
Cdd:MTH00108 161 RTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNSNLPLMglLLAATGKSAQFGLHPWLPSAMEGP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 239 TPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGIN 318
Cdd:MTH00108 241 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 319 QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESAN 398
Cdd:MTH00108 321 QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAAN 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 399 TSYTNAWALAVTLFATSLTAVYSTRIIFYALMGRPRFSSLTSINENNPQLLNSIKRLLIGSIIAGFILSYNIPPMNIPVL 478
Cdd:MTH00108 401 TSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQM 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 479 TMPIYLKLTALLVTILGFVIAMELNSMTLYLKTKMYSNTSKFSTLLGYFPTVIHRLNPHLNLIMSQKLSSTLLDLVWLEK 558
Cdd:MTH00108 481 TMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 2172613261 559 TIPKSTTNFHSTTSTMTSNQKGLIKLYFLSFLTSTLLATT 598
Cdd:MTH00108 561 ILPKTISLIQMKASTTISNQKGLIKLYFLSFLITLTLSLL 600
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
3-602 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 931.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 3 MFSSLILTsLVTLLFPIFLTMSDYHKHVNYP-NYVKISIICALSFCMVPTLMFINSNYELIISNWHWMTIQTFTLSMSFK 81
Cdd:MTH00137 7 MTSSLILI-FALLIYPLLTTLSPNPQKPNWAlTHVKTAVKTAFFVSLLPLFLFLNQGAETIITNWNWMNTLTFDINISFK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 82 LDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGR 161
Cdd:MTH00137 86 FDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGR 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 162 TDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLFM----MDVSLFPLLGLLlAATGKSAQFGLHPWLPSAMEG 237
Cdd:MTH00137 166 ADANTAALQAVIYNRVGDIGLILAMAWMATNLNSWEIQQIFAlskdFDLTLPLLGLIL-AATGKSAQFGLHPWLPSAMEG 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 238 PTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGI 317
Cdd:MTH00137 245 PTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGL 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 318 NQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESA 397
Cdd:MTH00137 325 NQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEAL 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 398 NTSYTNAWALAVTLFATSLTAVYSTRIIFYALMGRPRFSSLTSINENNPQLLNSIKRLLIGSIIAGFILSYNIPPMNIPV 477
Cdd:MTH00137 405 NTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPLSPINENNPAVINPIKRLAWGSIIAGLLITSNILPLKTPV 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 478 LTMPIYLKLTALLVTILGFVIAMELNSMT-LYLKTKMYSNTSKFSTLLGYFPTVIHRLNPHLNLIMSQKLSSTLLDLVWL 556
Cdd:MTH00137 485 MTMPPLLKLAALIVTILGLLIALELASLTnKQFKPTPTLPPHHFSNMLGFFPAIIHRLTPKLNLTLGQTIATQMVDQTWL 564
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 2172613261 557 EKTIPKSTTNFHSTTSTMTSN-QKGLIKLYFLSFLTSTLLATTAVFY 602
Cdd:MTH00137 565 EKTGPKGIASLQLPLITTTSNiQQGMIKTYLTLFLLTLALATLLLLL 611
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
3-598 |
0e+00 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 855.23 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 3 MFSSLILTSLVTLLFPIFLTMSdYHKHVNYPNYVKISIICALSFCMVPTLMFINSNYELIISNWHWMTIQTFTLSMSFKL 82
Cdd:MTH00004 4 LLNTTTLLTLLILLTPILLPLL-SKNLKNSPTTIKTTVKLAFLISLIPLTLFLNSGTESITTNWPWIFTTTFNIPISFKL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 83 DYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRT 162
Cdd:MTH00004 83 DQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 163 DANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLFMM-DVSLFPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPV 241
Cdd:MTH00004 163 EANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFSPtQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPV 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 242 SALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGINQPH 321
Cdd:MTH00004 243 SALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQ 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 322 LAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESANTSY 401
Cdd:MTH00004 323 LAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSY 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 402 TNAWALAVTLFATSLTAVYSTRIIFYALMGRPRFSSLTSINENNPQLLNSIKRLLIGSIIAGFILSYNIPPMNIPVLTMP 481
Cdd:MTH00004 403 LNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTKTPPMTMP 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 482 IYLKLTALLVTILGFVIAMELNSMTLYLKTKMYSNTSKFSTLLGYFPTVIHRLNPHLNLIMSQKLSSTLLDLVWLEKTIP 561
Cdd:MTH00004 483 TTTKLAALIVTILGILLALELSNMTTTLTPPKQNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQKIATHLIDLSWLEKMGP 562
|
570 580 590
....*....|....*....|....*....|....*...
gi 2172613261 562 KSTTNFHSTTSTMTSN-QKGLIKLYFLSFLTSTLLATT 598
Cdd:MTH00004 563 KGLANLQLTASKTLTTlQKGLIKNYLTSFALTILLLLL 600
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-598 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 836.48 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 1 MNMFSSLILTSLVTLLFPIFLTMSDyhkhvNYPNYVKISIICALSFCMVPTLMFINSNYELIISNWHWMTIQTFTLSMSF 80
Cdd:MTH00066 4 MLIFNSSMILSLLLLILPLLLPKSN-----NFHTNVKTSVKTAFFISLIPLMIFINQGLESITTSFHWMNIFNFNINSSF 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 81 KLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00066 79 KFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 161 RTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLFMM-DVSLFPLLGLLLAATGKSAQFGLHPWLPSAMEGPT 239
Cdd:MTH00066 159 RADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLnDNSTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPT 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 240 PVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 319
Cdd:MTH00066 239 PVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQ 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 320 PHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESANT 399
Cdd:MTH00066 319 PQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNT 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 400 SYTNAWALAVTLFATSLTAVYSTRIIFYALMGRPRFSSLTSINENNPQLLNSIKRLLIGSIIAGFILSYNIPPMNIPVLT 479
Cdd:MTH00066 399 SNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQILT 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 480 MPIYLKLTALLVTILGFVIAMELNSMTlyLKTKMYSNTSKFSTLLGYFPTVIHRLNPHLNLIMSQKLSSTLLDLVWLEKT 559
Cdd:MTH00066 479 MPTFMKLAALLVTLLGLLIALDLAKIT--SKTTPKTKMHSFSNLLAFFPTIIHRLSPKTNLNSGQNIATHLTDMTWYEKS 556
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 2172613261 560 IPKSTTNFH-STTSTMTSNQKGLIKLYFLSFLTSTLLATT 598
Cdd:MTH00066 557 GPKGLTNQQlPPIKTITNIQTGLIKTYLTLFLITLLLMLI 596
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-603 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 684.76 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 1 MNMFSSLILTSLVTLLFPIFLTMSdyhkhvNYPNYVKISIICALSFCMVPTLMFINSNYELIISNWHWMTIQTFTLSMSF 80
Cdd:MTH00211 2 NTIFNSGFLLILILLLLPLLLPLN------NSKLHIKKAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSF 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 81 KLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00211 76 KFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 161 RTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLF-MMDVSLFPLLGLLLAATGKSAQFGLHPWLPSAMEGPT 239
Cdd:MTH00211 156 RSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFiLNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 240 PVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 319
Cdd:MTH00211 236 PVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQ 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 320 PHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESANT 399
Cdd:MTH00211 316 PQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNG 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 400 SYTNAWALAVTLFATSLTAVYSTRIIFYALMGRPRFSSLTSINENNPQLLNSIKRLLIGSIIAGFILSYNIPPMNIPVLT 479
Cdd:MTH00211 396 SYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILS 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 480 MPIYLKLTALLVTILGFVIAMELnsmTLYLKTKMYSNTSKFSTLLGYFPTVIHRLNPHLNLIMSQKLSSTLLDLVWLEKT 559
Cdd:MTH00211 476 LPFLLKLMPLLVTIVGLLLGLEL---VNLTHKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLGWYEKL 552
|
570 580 590 600
....*....|....*....|....*....|....*....|....*
gi 2172613261 560 IPKSTTNFHSTTSTMTSN-QKGLIKLYFLSFLTSTLLATTAVFYF 603
Cdd:MTH00211 553 GPKGLGVNQKKLIKLVTSpQQGLIKSYLALLLLSLLLILLLFLLF 597
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
1-603 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 557.28 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 1 MNMFSSLILTSLVTLLFPIFLTMS---------------------DYHKHVNYPNYVKISIICALSF-CMVPTLMFINSN 58
Cdd:MTH00208 1 MVINPSMIISSINLSIFIILLISIffssnlpnistsnaslggnnnNNSIINYNNSNFSISLLKTLAFlSLINLLIWILLG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 59 YELIISNW-HWMTIQTFTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNL 137
Cdd:MTH00208 81 CPNINISLsNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 138 FQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLFMMDVSLFPLLGLL-- 215
Cdd:MTH00208 161 FLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILSLNNSNSFLINILlf 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 216 ---LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAICALT 292
Cdd:MTH00208 241 gilLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLILGSLTALFAASTAIS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 293 QNDIKKIIAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKALPFTSSSLI 372
Cdd:MTH00208 321 QHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCII 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 373 IGSLALTGTPFLTGFYSKDLIIESANTSYTNAWALAVTLFATSLTAVYSTRIIFYALMGRPRFSSLTSINENNPQLLNSI 452
Cdd:MTH00208 401 LGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPL 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 453 KRLLIGSIIAGFILSYNIppMNIPVLTMPIYLKLTALLVTILG-FVIAMELNSMTLYLKTkmySNTSKFSTLLGYFPTVI 531
Cdd:MTH00208 481 LRLAIGTIISGWFFSNFV--FNLPPLTLPLILKSLPLIVTIIGaAFSFSFLLSLSSNPIN---SNFFSFLSNQWFFVNIS 555
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2172613261 532 HRLNPHLNLIMSQKLSSTLLDLVWLEKTIPKSTTNFHSTTSTMTSN-QKGLIKLYFLSFLTSTLLATTAVFYF 603
Cdd:MTH00208 556 HSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLtQTGYIKQYLLSSTLLFLLILTLSLII 628
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
43-499 |
1.97e-142 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 426.11 E-value: 1.97e-142
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 43 ALSFCMVPTLMFINSNYELIISNWHWMTIQTFTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLL 122
Cdd:COG1009 39 LAAFVLSLLLFPAVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 123 LFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLF 202
Cdd:COG1009 119 LFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELL 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 203 MMDVSLFPLLGLLLA-------ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLT 275
Cdd:COG1009 199 AAAPTILSSPLLTLIllllllgAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVV 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 276 LCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNdEQDIR 355
Cdd:COG1009 279 AIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG-TRDIR 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 356 KMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESANTSYTNAWALAVTLFATS-LTAVYSTRIIFYALMGRPR 434
Cdd:COG1009 358 KMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLGAfLTAFYSFRLFFLVFFGKPR 437
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2172613261 435 FSSLTSINENNPQLLNSIKRLLIGSIIAGFILSYN----IPPMNIPVLTM----PIYLKLTALLVTILGFVIA 499
Cdd:COG1009 438 PKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLleglLAPAAVLGGELhlahGLLLNALPLLLSLLGIALG 510
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
66-499 |
2.10e-135 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 408.78 E-value: 2.10e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 66 WHWMTIQTFTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWE 145
Cdd:PRK06590 66 WTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 146 GVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLFMMDVSLFPLLGLLL--------- 216
Cdd:PRK06590 146 GVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVFAAAPQFFGLGWSALtliclllfi 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 217 AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAICALTQNDI 296
Cdd:PRK06590 226 GAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 297 KKIIAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKALPFTSSSLIIGSL 376
Cdd:PRK06590 306 KRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTL 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 377 ALTGTPFLTGFYSKDLIIESANTSYtNAWALAVTLFATSLTAVYSTRIIFYALMGRPRFSS----LTSINENNPQLLnsi 452
Cdd:PRK06590 386 ALIGIPPFAGFFSKDEILEAAFANG-HINLFVAGLVGAFLTAFYSFRLIFLVFHGKEKEKIhhphESPAVMTLPLIV--- 461
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 2172613261 453 krLLIGSIIAGFILSYNI---------PPMNIPVLTMPIYLKLTALLVTILGFVIA 499
Cdd:PRK06590 462 --LAVLSVFAGALIVPPFlgvlpltteLAHGEAEHHLPVWVALLPLVVALAGIALA 515
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
2-499 |
9.69e-130 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 393.57 E-value: 9.69e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 2 NMFSSLILTSLVTLLFPIFLTMSDYHKHVNYPNYVKISIICALSFCmVPTLMFINSNYELI-ISNWHWMTIQTFTLSMSF 80
Cdd:TIGR01974 1 NLIFLIVFLPLIGFLIAGLFGRRIGERVSGIIGIGSVGLSAALSAF-VFVDFFLNGEGEAFtQSLFPWISVGGFQVDFGL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 81 KLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:TIGR01974 80 RLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYK 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 161 RTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLFMMDVSLFPLLGLLLA------ATGKSAQFGLHPWLPSA 234
Cdd:TIGR01974 160 KPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPGAFFSALTLIClllfigAMGKSAQLPLHTWLPDA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 235 MEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVT 314
Cdd:TIGR01974 240 MEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 315 IGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLII 394
Cdd:TIGR01974 320 LGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLIL 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 395 ESANTSYTNAWALAVTLFATSLTAVYSTRIIFYALMGRPRFSSLTSINENNPQLLNSIKRLLIGSIIAGFILSYNIPPM- 473
Cdd:TIGR01974 400 EAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLk 479
|
490 500 510
....*....|....*....|....*....|....*
gi 2172613261 474 ---------NIPVLTMPIYLKLTALLVTILGFVIA 499
Cdd:TIGR01974 480 gvlptsaepALEHHHVPALEIWSPTAVAILGILLA 514
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
44-603 |
3.85e-116 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 357.23 E-value: 3.85e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 44 LSFCMVPTLMFINSNYELIISNWHWMTIQTFTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLL 123
Cdd:MTH00151 14 YSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVML 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 124 FLITMMILVTSNNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAILYNRIGDiGFVLAMAWFLLNSNSWELQQLFM 203
Cdd:MTH00151 94 FVLSMNLLIFIPSLPSLLLGWDGLGIVSFALV-IYYQNKKSLSAGMLTALTNRIGD-VLILLSIALLVLLGHWSILSMWD 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 204 MDVSLFPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITT 283
Cdd:MTH00151 172 FKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISLLTL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 284 LFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKA 363
Cdd:MTH00151 252 LMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLS 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 364 LPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESANTSYTNAWALAVTLFATSLTAVYSTRIIFYALMGRPRFSSLTSINE 443
Cdd:MTH00151 332 LPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSD 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 444 NNPQLLNSIKRLLIGSIIAGFILSyNIPPMNIPVLTMPIYLKLTALLVTILGFVIAMeLNSMTLYLKTKMYSNTSKFSTL 523
Cdd:MTH00151 412 EDFYVSLPMLLLSLGALIGGKLLQ-SLFEGFSEEFFLPSYLKLLIGFVILLGLFLSF-GFWDSGFSSSKMVKLSFFFSSM 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 524 LGYFPTVIHRLNpHLNLIMSqKLSSTLLDLVWLEKTIPKSTtnFHSTTSTMTSNQKGLIKLYFLSFLTSTLLATTAVFYF 603
Cdd:MTH00151 490 WFLSPLSSQPLK-SLSLKLS-NSSMKSLDMGWLEILGGQGV--FKANKSFSVLNESWPVKWFNFFIGLILLLVLFLVVIS 565
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
59-600 |
8.20e-116 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 357.85 E-value: 8.20e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 59 YELIISN-------WHWMTIQTFTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMIL 131
Cdd:MTH00020 48 YEILFNSsttyiklWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 132 VTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLFMMDVSLFPL 211
Cdd:MTH00020 128 VTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVVSAPSS 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 212 LGLL------LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLF 285
Cdd:MTH00020 208 DITLiclflfIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFF 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 286 TAICALTQNDIKKIIAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKALP 365
Cdd:MTH00020 288 AATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLP 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 366 FTSSSLIIGSLALTGTPFLTGFYSKDLIIESANTSYTNAWALAVTLFATSLTAVYSTRIIFYALMGRP--RFSSLTSINE 443
Cdd:MTH00020 368 LTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTnlKKAVFFHLHE 447
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 444 NNPQLLNSIKRLLIGSIIAGFILSYNIPPMNIPVLTM-PIYLKLTALLVTILGFVIAMELNSMTLYLKTKMYSNTSKFST 522
Cdd:MTH00020 448 GDWNLLLPLGILALGSIFVGYLAKEMIWSFQITLPPIvPLSIKLLPVFLSLGGIGLVIILYFYSSKTFRVPFSFIGRNSY 527
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 523 LLGYFPtviHRLNPHLNLIMSQK-------LSSTLLDLVWLEKTIPKSTTNFHSTTSTMTSN-QKGLIKLYFLSFLTSTL 594
Cdd:MTH00020 528 TFLGSA---WQFNYILNYFLIKKiwkgghlISYRTIDKGVLELVGPKGISNFLIILTQGLSSlQSGLVFNYALVILIGVA 604
|
....*.
gi 2172613261 595 LATTAV 600
Cdd:MTH00020 605 IFIWGL 610
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
46-590 |
2.81e-115 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 355.22 E-value: 2.81e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 46 FCMVPTLMFINSNYELIIsNWHWMTIQTFTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFL 125
Cdd:MTH00165 17 ILFFLGLYFLLNDYSLFI-EWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLLFV 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 126 ITMMILVTSNNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLlNSNSWE----LQQL 201
Cdd:MTH00165 96 LSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMM-NFGSWNfifyLDFM 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 202 FMMDVSLFPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLtLCLGAI 281
Cdd:MTH00165 174 KNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFFSKFL-LLISLL 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 282 TTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLF 361
Cdd:MTH00165 253 TMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMGGLS 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 362 KALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESANTSYTNAWALAVTLFATSLTAVYSTRIIFYALMGRPRFSSLTSI 441
Cdd:MTH00165 333 NFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNL 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 442 NENNPQLLNSIKRLLIGSIIAGFILSYNIPPMNIpVLTMPIYLKLTALLVTILGFVIAMELNSMTLY--LKTKMYSNTSK 519
Cdd:MTH00165 413 SDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPY-MICLPFYLKLLTLFVILLGGWLGYELSLMSLSynLKSLKNYKLSS 491
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2172613261 520 FSTLLGYFPTVIHRLNPHLNLIMSQKLSStLLDLVWLEKTIPKSTTNFHSTTSTMTSN-QKGLIKLYFLSFL 590
Cdd:MTH00165 492 FLGSMWFMPFLSTYGISYYPLNLGSLSLK-SFDQGWSEYFGGQGLYNFLKKLSKLIQWlQNNNLKIYLLSFL 562
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
66-499 |
3.44e-114 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 353.54 E-value: 3.44e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 66 WHWMTIQTFTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWE 145
Cdd:MTH00210 62 WRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 146 GVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLFMMDVSLFPLLGLL-------LAA 218
Cdd:MTH00210 142 GVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESLTiiclllfIGA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 219 TGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAICALTQNDIKK 298
Cdd:MTH00210 222 VGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKK 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 299 IIAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKALPFTSSSLIIGSLAL 378
Cdd:MTH00210 302 VIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSL 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 379 TGTPFLTGFYSKDLIIESANTSYTNAWALAVTLFATSLTAVYSTRIIFYALMGRPRFSSLTSINENNPQLLNSIKRLL-- 456
Cdd:MTH00210 382 MGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGVHESSWNITFPLLLla 461
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 2172613261 457 IGSIIAG-----FILSYNIPPMnipvltMPIYLKLTALLVTILGFVIA 499
Cdd:MTH00210 462 FGSIFVGylgkeVVLSNVIPPI------VPNSIKMIPLLFSLLGALLA 503
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
44-595 |
1.30e-102 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 322.48 E-value: 1.30e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 44 LSFCMVPTLMFINSNYELIISNWHWMTIQTFTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLL 123
Cdd:MTH00207 17 MSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 124 FLITMMILVTSNNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAILYNRIGDIGFVLAMAWfLLNSNSWELQQLFM 203
Cdd:MTH00207 97 FVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSIGW-TLNQGHWSITNMWQ 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 204 MDVSLFPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITT 283
Cdd:MTH00207 175 TDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTM 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 284 LFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKA 363
Cdd:MTH00207 255 LMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQ 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 364 LPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESANTSYTNAWALAVTLFATSLTAVYSTRIIFYALMGRPRFSSLTSINE 443
Cdd:MTH00207 335 MPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHLED 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 444 NNPQLLNSIKRLLIGSIIAGFILSYNIPPMNIPvLTMPIYLKLTALLVTILGFVIAMELNSMTLYLKTKMYSN-TSKFST 522
Cdd:MTH00207 415 EDKSLTTPMLLLTLGAITSGSALNWWLPTPQEE-PILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLLINNpLSHFAS 493
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2172613261 523 LLGYFPTVIHRLNPHLNLIMSQKLSSTLLDLVWLEKTIPKSTTNFHSTTST--MTSNQKGLIKLYFLSFLTSTLL 595
Cdd:MTH00207 494 CLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNnvMKLQKNIPNNYLMMSFVLLTII 568
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
46-589 |
1.72e-99 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 313.89 E-value: 1.72e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 46 FCMVPTLMFINSNyELIISNWHWMTIQTFTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFL 125
Cdd:MTH00209 15 FSFLMFVIFMWFQ-KIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFI 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 126 ITMMILVTSNNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLFMMD 205
Cdd:MTH00209 94 LSMNFLIFVPNLITLLLGWDGLGLVSYLLV-IYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWNIFYLNFNSN 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 206 VSLFPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLF 285
Cdd:MTH00209 173 LGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTLM 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 286 TAICALTQNDIKKIIAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKALP 365
Cdd:MTH00209 253 ASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMP 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 366 FTSSSLIIGSLALTGTPFLTGFYSKDLIIESANTSYTNAWALAVTLFATSLTAVYSTRIIFYALMGRPRFSSLTSINENN 445
Cdd:MTH00209 333 ITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQN 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 446 PQLLNSIKRLLIGSIIAGFILSYNIPPmNIPVLTMPIYLKLTALLVTILGfVIAMELNSMTLYLKTKMYSNTSKFSTLlg 525
Cdd:MTH00209 413 KLNLKPMLVLTLGSITGGSVMSWVMVP-SVNSVVLPWFLKLLPIMLILFG-VLLMYMVLKKNFFLIKGYKVNYFLSQM-- 488
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2172613261 526 YFPTVIHRLNPHLNLIMSQKLSSTLLDLVWLEKTIPKSTTNFHSTTSTMTSN-QKGLIKLYFLSF 589
Cdd:MTH00209 489 WFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIiQNNSLKLFVTFM 553
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
68-434 |
8.93e-94 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 302.33 E-value: 8.93e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 68 WMTIQTFTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGV 147
Cdd:PRK07376 75 WASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELV 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 148 GIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWE-------LQQLfmmdVSLFPLLGLLLAATG 220
Cdd:PRK07376 155 GMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDfdgiadrLSEL----VSSGAVSGWLALLLC 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 221 ---------KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAICAL 291
Cdd:PRK07376 231 ilvflgpmaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIAL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 292 TQNDIKKIIAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLND--------EQDIRKMGGLFKA 363
Cdd:PRK07376 311 TQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKY 390
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2172613261 364 LPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESANTSYTNAWalAVTLFATSLTAVYSTRIIFYALMGRPR 434
Cdd:PRK07376 391 MPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALW--FVGFLTAGMTAFYMFRMYFLTFEGEFR 459
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
38-595 |
3.81e-88 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 287.24 E-value: 3.81e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 38 ISIICALSFCMVPTLMfinsNYELIISN-------WHWMTIQTFTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHS 110
Cdd:MTH00032 31 LSTICMGSSTLIALFL----AYEVLINDavvhielYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSD 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 111 DPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAMAW-- 188
Cdd:MTH00032 107 DPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLiy 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 189 -------------------FLLNSNSWELQQLFMMDVSLFPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSST 249
Cdd:MTH00032 187 ktigsldfltfnggsvgsgIMDRGYYGGGAYESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAAT 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 250 MVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGINQPH-LAFLHIC 328
Cdd:MTH00032 267 MVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHnVGLFHLV 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 329 THAFFKAMLFMCSGSIIHNLN-DEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIE------------ 395
Cdd:MTH00032 347 NHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEltysgrnmgipf 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 396 ------------------------SANTSYTNAWALAVTLFATSLTAVYSTRIIFYALMGRPRFS--SLTS--INENNPQ 447
Cdd:MTH00032 427 gssllkiqgdigikkddrgsiggpEGYPSRGSAFAFWLGTVAALLTAFYSIRLVYITFIISPNSPkeSLISshINIVDKR 506
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 448 LLNSIKRLLIGSIIAGFILSyNIPPMNIPVLTMPIYLKLTALLVTILGFVIAM--ELNSMTLYLKTKMYSNTSKFSTLLG 525
Cdd:MTH00032 507 VLTVLSLLCFGAIFVGYLIQ-DILIGDIEHPIVPPLIKVMPTLMGLFGMGLCLwaQKGTREGELYWGFDPIGPSFLLSIY 585
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2172613261 526 YFPTVIHRLNPHLNLIMSQKLSS-------TLLDLVWLEKTIPKSTTNFHSTTSTMTSN-QKGLIKLYFLSFLTSTLL 595
Cdd:MTH00032 586 SFLGGAWQGDHLINKLVAIPLFSfghwgiyKTLDRGWLELFGPQGISTIALRVSQFISNlQSGVISRYALVLLSFTII 663
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
41-426 |
1.29e-66 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 231.32 E-value: 1.29e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 41 ICALSFCMV-PTLMFI-----NSNYELIisnWHWMTIQTFTLSMSFKLD----YFSMLFIPVALFVtwsiMEFSMWYMHS 110
Cdd:CHL00025 45 ILLLSIVMIfSLNLSIqqingSSIYQYL---WSWTINNDFSLEFGYLIDpltsIMLILITTVGILV----LIYSDNYMSH 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 111 DPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFL 190
Cdd:CHL00025 118 DQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFY 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 191 LNSNSWELQQLFMM--------DVSLFPLLGLLL----AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLL 258
Cdd:CHL00025 198 WITGSFEFRDLFEIfnnliynnEVNLLFATLCAFllflGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLV 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 259 IRFYPLMEHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLF 338
Cdd:CHL00025 278 ARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLF 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 339 MCSGSIIHNL--------NDEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLII-ESANTSYTNAWalaV 409
Cdd:CHL00025 358 LGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILnDSWLYSPIFAI---I 434
|
410
....*....|....*..
gi 2172613261 410 TLFATSLTAVYSTRIIF 426
Cdd:CHL00025 435 AWSTAGLTAFYMFRIYL 451
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
60-413 |
4.27e-62 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 219.02 E-value: 4.27e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 60 ELIISNWHWmtIQTFTLSMSFKLDYFSMLFipvALFVT---WSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNN 136
Cdd:PRK12647 42 ETVRGGYAW--VPSLGVNLSFLLDGLSLTF---ALLITgigTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDN 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 137 LFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGdiGFVLAMAWFLLN--SNSWELQQLFMM-------DVS 207
Cdd:PRK12647 117 LITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGG--GLALLAGLILLGnvTGTYSLSELLASgdvirehPLY 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 208 LFPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTA 287
Cdd:PRK12647 195 LAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGA 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 288 ICALTQNDIKKIIAFSTSSQLGLMMVTIGINQPHL---AFLHICTHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGLFKAL 364
Cdd:PRK12647 275 LLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVAGIIDHETG-TRDITKLGGLRRAM 353
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2172613261 365 PFTSSSLIIGSLALTGTPFLTGFYSKDLIIESanTSYTNAWALAVTLFA 413
Cdd:PRK12647 354 PITAAAALLAALSMAGLPPLFGFLAKELIYEA--LLEAPLWSLILTVAA 400
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
65-434 |
2.32e-57 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 207.97 E-value: 2.32e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 65 NWHWMTIQTF-----TLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNLFQ 139
Cdd:PRK12650 55 TWSVTWIPDLlgngvDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVV 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 140 LFIGWEGVGIMSFLLIGwwYGRTDANTAALQAILYNRIGDIGFVLAMAWF-----------LLNSNSWELQQLFMMDVSL 208
Cdd:PRK12650 135 LFVAWELVSLASFFLIA--RSGSGGEAGSIRTLILTFFGGLTLLAAVAIAatqtgttslsgILHSDVWAEKPGLTTVVAV 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 209 FPLLglllAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAI 288
Cdd:PRK12650 213 LIAV----AAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAV 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 289 CALTQNDIKKIIAFSTSSQLGLMMVTIGINQPH---LAFLHICTHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGLFKALP 365
Cdd:PRK12650 289 FAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDHQAG-TRDIRRLGSLWRRMP 367
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2172613261 366 FTSSSLIIGSLALTGTPFLTGFYSKDLIIESANTSYTNAWALAVTLFATSLTAV----YSTRIIFYALMGRPR 434
Cdd:PRK12650 368 FTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAVftfaYSARLVLGAFVDGPR 440
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
60-434 |
1.04e-56 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 206.19 E-value: 1.04e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 60 ELIISNWHWMtiQTFTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNLFQ 139
Cdd:PRK12648 54 EVIRAEIEWL--PALGLNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLIL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 140 LFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGdiGFVLaMAWFLLNSN---SWELQQLFMM-------DVSLF 209
Cdd:PRK12648 132 LVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGAG--GLAL-LAGVLLLGHivgSYDLDVVLAAgdlirahPLYPP 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 210 PLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLM---EHNKVIQTLTlclGAITTLFT 286
Cdd:PRK12648 209 ALVLILLGAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLagtEEWFWIVGGA---GLITLLLG 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 287 AICALTQNDIKKIIAFSTSSQLGLMMVTIGINQPhLAFL----HICTHAFFKAMLFMCSGSIIHnlndE---QDIRKMGG 359
Cdd:PRK12648 286 AYFALFQHDLKGLLAYSTISHLGLITLLLGLGSP-LAAVaaifHIINHATFKASLFMAAGIIDH----EtgtRDMRRLSG 360
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2172613261 360 LFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESA---NTSYTNAWAL-AVTLFATSLTAVYSTRIIFYALMGRPR 434
Cdd:PRK12648 361 LRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFAETldtHLLGSLDWLLpVAATLAGAFSVAYSLRFIHDVFFGPPP 439
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
79-428 |
1.84e-54 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 191.13 E-value: 1.84e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 79 SFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGwW 158
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA-L 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 159 YGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLFMMDVSLFPLLGLLLAA---TG---KSAQFGLHPWLP 232
Cdd:COG0651 150 GGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFAlllVGfgiKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 233 SAM-EGPTPVSALLhSSTMVVAGVFLLIRFYPLM---EHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQL 308
Cdd:COG0651 230 DAYpAAPSPVSALL-SGLLTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQI 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 309 GLMMVTIGINQPHL---AFLHICTHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLT 385
Cdd:COG0651 309 GYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLS 387
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2172613261 386 GFYSKDLIIESANTSytNAWALAVTLFATS-LTAVYSTRIIFYA 428
Cdd:COG0651 388 GFVSKWLLLQAALEA--GAWLLAAVLLLSSlLTLAYFVRIFGRA 429
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
3-434 |
6.19e-53 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 193.91 E-value: 6.19e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 3 MFSSLILTSLVTLLFPIFLTmSDYHKHVNYPNYVkISIICalsFCMVPTLMFINSNYELIISNWHWMTiqTFTLSMSFKL 82
Cdd:TIGR00940 1 LHSAFILPPFAASLIPILYP-SDQRIHIGWFVLA-IPLVC---FLYTLGLYPYTASGGVLHYTIDWVP--ELGLNFTLYM 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 83 DYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRT 162
Cdd:TIGR00940 74 DGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRA 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 163 DANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLFMMDVSLFPLLGLLLA-------ATGKSAQFGLHPWLPSAM 235
Cdd:TIGR00940 154 HSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAIRNSPLFGTAmvlvllgAFTKSAQFPFHIWLPDAM 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 236 EGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTI 315
Cdd:TIGR00940 234 EAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLL 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 316 GINQPHL----------------AFLHICTHAFFKAMLFMCSGSIIHNlNDEQDIRKMGGLFKALPFTSSSLIIGSLALT 379
Cdd:TIGR00940 314 GLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIASAAMA 392
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2172613261 380 GTPFLTGFYSKDLIIESANTSYTNAWALAVTL---------FATSLTAVYSTRIIFYALMGRPR 434
Cdd:TIGR00940 393 GVPPFNGFLSKEMFFAEAITAHLVNPFDTVTLgylfpyvatVASVFTFVYSLRFIHGVFFGRPK 456
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
134-410 |
9.46e-53 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 182.51 E-value: 9.46e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 134 SNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLFMMDV------- 206
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTgglnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 207 SLFPLLGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGVFLLIRFYPLMEH-NKVIQTLTLCLGAITTL 284
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPsSPFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 285 FTAICALTQNDIKKIIAFSTSSQLGLMMVTIGINQPH---LAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLF 361
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2172613261 362 KALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESANTSYTNAWALAVT 410
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
66-428 |
4.91e-51 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 189.75 E-value: 4.91e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 66 WHWMTIQTFTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSD-PFINRFFMYLLLFLITMMILVTSNNLFQLFIGW 144
Cdd:PRK12644 56 EVVPWIPSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDePRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFW 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 145 EGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDigfvLAMAWFLL----NSNSWELQQLFMMD-----VSLFPLLGLL 215
Cdd:PRK12644 136 ELTTVLSFLLIGHYAERAASRRAALQALLVTTAGG----LAMLVGIIilgqAAGTYRLSELLADPptgpaVSVAVVLILV 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 216 LAATgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAICALTQND 295
Cdd:PRK12644 212 GALS-KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHD 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 296 IKKIIAFSTSSQLGLMMVTIGINQPH--LAFLH-ICTHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGLFKALPFTSSSLI 372
Cdd:PRK12644 291 LKLILAYGTVSQLGFLTVLVGIGTRDaaLAGLAmLLAHALFKAALFLVVGIIDHSTG-TRDIRKLSGLGRRQPVLAVVAA 369
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 373 IGSLALTGTPFLTGFYSKDLIIES----ANTSYTNAWALAVTLFATSLTAVYSTRIIFYA 428
Cdd:PRK12644 370 LAAASMAGLPPLLGFVAKEAALEAvlhdGALGPAGPVVLAGIVLGSILTVAYSLRFLWGA 429
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
76-512 |
2.57e-49 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 179.34 E-value: 2.57e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 76 LSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLI 155
Cdd:MTH00095 37 LSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLV 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 156 gWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLFmmdvSLFPLLGLLLAATGKSAQFGLHPWLPSAM 235
Cdd:MTH00095 117 -LFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSSYYFFSFSFF----SSSMILMLLLTSFTKSAQFPFSSWLPKAM 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 236 EGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIqTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTI 315
Cdd:MTH00095 192 SAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVM-KIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTF 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 316 GINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIE 395
Cdd:MTH00095 271 GSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILE 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 396 SANTSYTNAWALAVTLFATSLTAVYSTRIIFYALMGrprFSSLTSINENNPQLLNSIKRLLIGSIIAGFILSYNIppMNI 475
Cdd:MTH00095 351 LFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLS---FSKVVNVYSSSVLMNFLSLMLVFFSVFFLWWLNFNL--LNL 425
|
410 420 430
....*....|....*....|....*....|....*..
gi 2172613261 476 PVLTMPIYLKLTALLVTILGFVIAMELNSMTLYLKTK 512
Cdd:MTH00095 426 PSLFLYLDFYVPLFYLFMIMLFSFFFFKLLFKELKYK 462
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
68-396 |
1.01e-48 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 181.88 E-value: 1.01e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 68 WMTIqtFTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYM-HSDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEG 146
Cdd:PRK12646 64 WMKT--LDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLsSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 147 VGIMSFLLIGWWYGRTDANTAALQAILYNRIGD----IGFVLAMAWFLLNSNSWELQQLFMMDVS---LFPLLGLLLAAT 219
Cdd:PRK12646 142 TSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGlallVGFIMLYIMTGTNNITEILGQADHIKNHglfIPMIFMFLLGAF 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 220 GKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAICALTQNDIKKI 299
Cdd:PRK12646 222 TKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGI 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 300 IAFSTSSQLGLMMVTIGIN-----QPHLAF------------LHICTHAFFKAMLFMCSGSIIHNlNDEQDIRKMGGLFK 362
Cdd:PRK12646 302 LAYSTISQLGMIMAMVGIGggyaqHQQDAIasiyvfvlfaalFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQ 380
|
330 340 350
....*....|....*....|....*....|....
gi 2172613261 363 ALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIES 396
Cdd:PRK12646 381 LFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDA 414
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
65-433 |
3.69e-48 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 177.79 E-value: 3.69e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 65 NWHWMTIQTFTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGW 144
Cdd:PRK07390 70 SFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 145 EGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLFM----MDVSLFPLLGLLLA--- 217
Cdd:PRK07390 150 EILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAwaatANLDPLTATLLGLAlia 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 218 -ATGKSAQFGLHPWLPSAMEGPTPVSaLLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAICALTQNDI 296
Cdd:PRK07390 230 gPTGKCAQFPLHLWLDEAMEGPNPAS-ILRNSVVVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDI 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 297 KKIIAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDeQDIRKMGGLFKALPFTSSSLIIGSL 376
Cdd:PRK07390 309 KRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILTTIT-QDLTELGGLWSRMPATTLAFLVGSA 387
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2172613261 377 ALTGTPFLTGFYSkdLIIESANTSYTNAWALAVTLFATSLTAVYSTRIIFYALMGRP 433
Cdd:PRK07390 388 GLVALLPLGGFWA--LLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVFLGKP 442
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
115-421 |
2.18e-46 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 170.15 E-value: 2.18e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 115 NRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWwYGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSN 194
Cdd:PRK06525 113 GRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISY-YQSPKALRSALKALLITHIGSLGLYLAAATLFLQTG 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 195 SWELQQLFMMDVS--LFPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEH-NKVI 271
Cdd:PRK06525 192 TFALSALSGLHGSlkYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiPHVI 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 272 QTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTI--GINQPHLAF----LHICTHAFFKAMLFMCSGSII 345
Cdd:PRK06525 272 GYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLslAILGSRLALegsiAYIFNHAFAKSLFFLVAGALS 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2172613261 346 HNLNdEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESANTSYTNAWALAVTLFATSLTAVYS 421
Cdd:PRK06525 352 YSCG-TRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIESVAS 426
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
76-397 |
1.74e-45 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 172.32 E-value: 1.74e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 76 LSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLI 155
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 156 GWWYGRTDANTAALQAILYNRIGdiGFVLAMAWFLLNS------------NSWELQQLFMMDVSLFPLLGLLLAATGKSA 223
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGG--GLFMFAGFLLLHVitgtydiatilqDSELIENIKGHPLFLITLILIFIGAAAKSA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 224 QFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFS 303
Cdd:PRK12649 230 QGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 304 TSSQLGLMMVTIGINQPH-------LAFLHICTHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGLFKALPFTSSSLIIGSL 376
Cdd:PRK12649 310 TISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAAL 388
|
330 340
....*....|....*....|.
gi 2172613261 377 ALTGTPFLTGFYSKDLIIESA 397
Cdd:PRK12649 389 AMAGIPPLNGFLSKEMFYETS 409
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
49-438 |
7.28e-45 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 170.49 E-value: 7.28e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 49 VPTLMFI--------NSNYELIISNWHWMTiqtfTLSMSFK--LDYFSMLFipvALFVTWS---IMEFSMWYMHSD-PFI 114
Cdd:PRK12645 37 VPVVLFIyflsliptTMSGNTVMKTLPWIP----SLGINFTlyVDGLSLLF---ALLITGIgslVVLYSIYYLSKKkEQL 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 115 NRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDI----GFVLamawFL 190
Cdd:PRK12645 110 GNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLsmlgGFIL----LY 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 191 LNSNSWELQQLFMMDVSLFPLLGLLLA-------ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYP 263
Cdd:PRK12645 186 IMTGSFSIREMIANADEIQNSPLFIPAmilillgAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTP 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 264 LMEHNKV-IQTLTLcLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGINQPHL----------------AFLH 326
Cdd:PRK12645 266 IFAGSQVwFWTVTL-VGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFH 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 327 ICTHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIES------ANTS 400
Cdd:PRK12645 345 LINHATFKGSLFMIVGIVDHETG-TRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESmlnateANLF 423
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 2172613261 401 YTNAWALAVTLFA---TSLTAVYSTRIIFYALMGRPRFSSL 438
Cdd:PRK12645 424 SLDTWGVLFPVIAwvaSVFTFVYSIIFIFKTFFGKYKPEQL 464
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
420-598 |
7.00e-44 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 154.63 E-value: 7.00e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 420 YSTRIIFYALMGRPRFSSLTSINENNPQLLNSIKRLLIGSIIAGFILSYNIPPmNIPVLTMPIYLKLTALLVTILGFVIA 499
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFP-KPPMMTMPLYLKLLALLVTILGLLLG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 500 MELNSMTLYLKTK-MYSNTSKFSTLLGYFPTVIHRLNPHLNLIMSQKLsSTLLDLVWLEKTIPKSTTNFHSTTSTMTSN- 577
Cdd:pfam06455 80 LELSNLSNKQLKKsLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKL-AKQIDQGWSEKFGPQGIAKTLMTLSKIIQNs 158
|
170 180
....*....|....*....|.
gi 2172613261 578 QKGLIKLYFLSFLTSTLLATT 598
Cdd:pfam06455 159 QKGLIKIYLLSFLLWLLLLLL 179
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
76-464 |
4.86e-38 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 146.95 E-value: 4.86e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 76 LSMSFKLDYFSMLFIPVALFVTWsimeFSMWYMHSDPFI-NRFFMYLLLFLITMMILVT-SNNLFQLFIGWEGVGIMSFL 153
Cdd:PRK08375 69 IGIELRADSLSALFLLVTSILAI----AALLYAIGYGEHrQTRFYALFLLLLAGLLGALlTADLFNLFVFLEIMSLSSYA 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 154 LIGWwYGRTDANTAALQAILYNRIGD------IGFVLAMAWFLlnsNSWELQQLFM-MDVSLFPLLGLLLAATGKSAQFG 226
Cdd:PRK08375 145 LVAM-GGDRRALAAARKYLIVGLIGStflligVGLLYGVTGTL---NMADLAGALAeNPTVVTAFGFVLLALALKAAVFP 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 227 LHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFY-----PLMEHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIA 301
Cdd:PRK08375 221 LHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 302 FSTSSQLGLMMVTIGINQPHL---AFLHICTHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGLFKALPFTSSSLIIGSLAL 378
Cdd:PRK08375 301 YSTVSQMGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVASLSL 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 379 TGTPFLTGFYSKDLIIESANTSYTnAWALAVTLFATSLTAVYSTRIIFYALMGRPRFSSLTSINENNPQLLNSIKRLLIG 458
Cdd:PRK08375 380 IGVPPTSGFVSKWYLVVGAVEAGQ-WLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEAPKQEAPLGMLAPSLALALL 458
|
....*.
gi 2172613261 459 SIIAGF 464
Cdd:PRK08375 459 SLLLGI 464
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
82-444 |
4.24e-34 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 136.25 E-value: 4.24e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 82 LDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGR 161
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDR 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 162 TDANTAALQ----------------AILYNRIG-----DIGFVLAMAWFLLNSNSWELQQLfmmdVSLFPLLGLLLAATG 220
Cdd:PRK12667 160 GDAVEAAIKyaligavgttlyflalAFLYATFGtlnmaDLSAKIRGLSFPLTGGLAGNPPL----ALGVALALALWAFTI 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 221 KSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGVFLLIRFY--------PLMEHNKVIQTLTLCLGAITTLFTAICAL 291
Cdd:PRK12667 236 KAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMMV 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 292 TQNDIKKIIAFSTSSQLGLMMVTIGINQP---HLAFLHICTHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGLFKALPFTS 368
Cdd:PRK12667 315 VQKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMPIAS 393
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2172613261 369 SSLIIGSLALTGTPFLTGFYSKdLIIESANTSYTNAWALAVTLFATSLTAVYSTRIIFYALMGRPRFSSLTSINEN 444
Cdd:PRK12667 394 FAFLIGALSLVGIPPLNGFFSK-LLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSLFFGKPKSGEEVEHKES 468
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
71-434 |
3.45e-33 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 132.90 E-value: 3.45e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 71 IQTFTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPfinRFFMYLLLFLITMMILV-TSNNLFQLFIGWEGVGI 149
Cdd:COG1008 69 IPSLGISYHLGVDGISLPLVLLTALLTPLAILASWNEIKKRP---KLYYALLLLLEAGMIGVfLALDLFLFYVFWELMLI 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 150 MSFLLIGWWyGRTDANTAALQAILYNRIGDIGFVLAMAW--FLLNSNSWELQQLFMMDVSLFPLLGLLLA---ATG-KSA 223
Cdd:COG1008 146 PMYFLIGIW-GGERRIYAAIKFFLYTLAGSLLMLVAILAlyFLAGALTFDIAELAAAPLPLTAQLLLFLAffiAFAvKVP 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 224 QFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGVFLLIRF-YPLM-EHNKVIQTLTLCLGAITTLFTAICALTQNDIKKII 300
Cdd:COG1008 225 MFPFHTWLPDAhVEAPTAGSVLL-AGVLLKMGGYGLLRFaLPLFpEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 301 AFSTSSQLGLMMV------TIGINQphlAFLHICTHAFFKAMLFMCSGSIIHNLNDeQDIRKMGGLFKALPFTSSSLIIG 374
Cdd:COG1008 304 AYSSVSHMGFVLLgifalnPLGLQG---AVLQMVSHGLITAALFLLVGVLYDRTHT-RDIADLGGLAKRMPVLAALFLLA 379
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 375 SLALTGTPFLTGFYSKDLIIESANTSYTnaWALAVTLFATSLTAVYSTRIIFYALMGRPR 434
Cdd:COG1008 380 ALASLGLPGTSGFVGEFLVLLGAFQVNP--WLAILAALGLILTAAYLLWMYQRVFFGPLK 437
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
98-345 |
2.08e-32 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 130.97 E-value: 2.08e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 98 WSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRI 177
Cdd:PRK08168 83 WVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADRL 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 178 GDIGFVLAMAWFLLNSNSWELQQL---FMMDVSLFPLLG----LLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTM 250
Cdd:PRK08168 163 AELLLLAAAALAYLEVGSLSLSALwahLAAQGASPSLQAaallLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVV 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 251 VVAGvFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGINQPHLAFLHICTH 330
Cdd:PRK08168 243 NLGG-FVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLVAH 321
|
250
....*....|....*
gi 2172613261 331 AFFKAMLFMCSGSII 345
Cdd:PRK08168 322 SLYKAHAFLSASEAV 336
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
38-404 |
6.00e-28 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 119.07 E-value: 6.00e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 38 ISIICALSFCMVPTLMFINSNYELIISNWHWMTiqtfTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWY---MHSDPFI 114
Cdd:PRK08667 35 LWLVIAIALLLFAGSLQLFTGNPLDIPLWGIAP----GLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERA 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 115 NRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSN 194
Cdd:PRK08667 111 NLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTG 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 195 SWELQQLFMMDVSLFPLLGLLLAATG-KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGVFLLIRFY-----PLMEH 267
Cdd:PRK08667 191 SFELSPLGASAGILSLVFLLLFLGFGiKAGIIPFHKWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRFLmdvlsPELWW 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 268 NKVIqtltLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGI-------NQPHLAFL-------HICTHAFF 333
Cdd:PRK08667 270 GVLI----LLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLyvifgvyGLDTLALLalggalfHSLNHALF 345
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2172613261 334 KAMLFMCSGSIIHNLNDeQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESANTSYTNA 404
Cdd:PRK08667 346 KSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSFSVA 415
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
80-433 |
4.00e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 115.58 E-value: 4.00e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 80 FKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWY 159
Cdd:PRK08376 86 WEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRN 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 160 GRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQ------QLFMMDVSLFPLLGLLLAATGKSAQFGLHPWLPS 233
Cdd:PRK08376 166 DTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAylavkmSENPTVVAKIALALFIAGLAMKSGAVPVHMWLPD 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 234 AM-EGPTPVSALLHSSTmvVAGVFLLIR----FYPLMEHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQL 308
Cdd:PRK08376 246 AYpAAPSSISAMLLVIK--QAGLYALARvlfsIYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQI 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 309 GLMMVTIGINQPHL---------------AFLHICTHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGLFKALPFTSSSLII 373
Cdd:PRK08376 324 GYMLLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLARTMPKTTIAFLI 402
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 374 GSLALTGTPFLTGFYSKDLIIESanTSYTNAWALAVTLFATSLTAVYSTRIIFYALMGRP 433
Cdd:PRK08376 403 GAAAIVGLPPFNGFASKWLIYES--SALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPP 460
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
79-438 |
1.45e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 113.12 E-value: 1.45e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 79 SFKLDYFSMLFIPVALFVtWSIMEFSMWymhsDPFINRFF-MYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGw 157
Cdd:PRK07234 62 TLRADALSGYFILTNALV-TLAVIFYCW----ESAKTRFFyAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA- 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 158 wYGRTD-ANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLFMMDVSLFPLLGLLLAAtgKSAQFGLHPWLPSAME 236
Cdd:PRK07234 136 -YPRTDrAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEAFALIALGLLV--KGGIFVSGLWLPLTHS 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 237 GPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLtlcLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIG 316
Cdd:PRK07234 213 EAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRI---FGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPL 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 317 INqphlAFLHIcTHAFFKAMLFMCSGsIIHNLNDEQDIRKMGGLFKALPftsssLIIGSLALTGTPFLTGFYSKDLIIes 396
Cdd:PRK07234 290 VG----GLYAL-AHGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKVLTL-- 356
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2172613261 397 antSYTNAWALAVTLFATSLTAVYSTRIIFYALMGRPRFSSL 438
Cdd:PRK07234 357 ---KNLLPWQAIALNLAAVGTAASFWKFIFLPFSADDEDKKP 395
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
132-397 |
7.36e-26 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 111.91 E-value: 7.36e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 132 VTSNNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQlfmMDVSLFPL 211
Cdd:PRK12668 110 VFAGDLLTLFVFWELMAFTSTFLV-WARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGA---IAGLGGTA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 212 LGLLLAATG-KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEhnkviqtLTLCLGAITTLFTAICA 290
Cdd:PRK12668 186 AWLILIGFGvNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTE-------LLIYIGAAMAVYGVFFA 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 291 LTQNDIKKIIAFSTSSQLGLMMVTIGINQP---HLAFLHICTHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGLFKALPFT 367
Cdd:PRK12668 259 LLENDLRRLLSYHIVSQVGYMVAGIGIGTAlaiNGAVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRSMPLT 337
|
250 260 270
....*....|....*....|....*....|
gi 2172613261 368 SSSLIIGSLALTGTPFLTGFYSKDLIIESA 397
Cdd:PRK12668 338 ALFCLVGALSISAFPLFSGFVSKSMIISAA 367
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
80-397 |
1.01e-25 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 110.79 E-value: 1.01e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 80 FKLDYFSMLFIPVALFVTWSIMEFSMWYM-------HSDPFINRFFMYLL-LFLITMMILVTSNNLFQLFIGWEGVGIMS 151
Cdd:PRK06458 65 FFIDDLNVFFLALIGVVGFLTSLYSIGYMrhevehgELSPVTLRLYYGMYqLFLFTMLLALTSNNLGLMWVAIEATTLSS 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 152 FLLIGWwYGRTDANTAALQAILYNRIGdIGFVL-------------------AMAWFLLNSNSWELQQLFMmdvSLFPLL 212
Cdd:PRK06458 145 ALLVGI-YRTRASLEAAWKYIIICSVG-VAFALfgtilvyanaatvmgdgemAILWTELLKHASLLDPTLM---KLAFVF 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 213 GLLLAATgKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAgVFLLIRFYPLME---HNKVIQTLTLCLGAITTLFTAI 288
Cdd:PRK06458 220 LLIGFGT-KVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDaaiGSDFPGRLLLIFGLLSVLVAAF 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 289 CALTQNDIKKIIAFSTSSQLGLMMVTIGINQP---HLAFLHICTHAFFKAMLFMCSGSIIHNLnDEQDIRKMGGLFKALP 365
Cdd:PRK06458 298 FLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPlgiFAALLHMLNHSLTKSAIFFASGNVLQKY-GTRDINVIRGLLKVSP 376
|
330 340 350
....*....|....*....|....*....|..
gi 2172613261 366 FTSSSLIIGSLALTGTPFLTGFYSKDLIIESA 397
Cdd:PRK06458 377 LTGWGLMLGALAIAGMPPFGVFISEFLILTAG 408
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
76-466 |
2.59e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 109.52 E-value: 2.59e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 76 LSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFIN--RFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFL 153
Cdd:PRK06589 75 YSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSssRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAF 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 154 LIGwwYGRTDANTAALQAILynrigDIGFVLAMAWFL---------LNSNSWELQQLFMMDVSLFPLLGLLLAaTGKSAQ 224
Cdd:PRK06589 155 LIG--HTRNNISLSGGYKYL-----KILMISALLLFLpaviliytkTGNLDFVSGGLFSKNQSIILLLMFIYG-IAKTAI 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 225 FGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLT-----LCLGAITTLFTA-ICALTQNDIKK 298
Cdd:PRK06589 227 FPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFaefnwLIFIPIVSIFYSsLKALKTDNIKK 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 299 IIAFSTSSQLGLMMVTIGINQP---HLAFLHICTHAFFKAMLFMCSGSIIhNLNDEQDIRKMGGLFKALPFTSSSLIIGS 375
Cdd:PRK06589 307 ILAYSTISQLSLALLSAFILTPkalGAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFIISISS 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 376 LALTGTPFLTGFYSKDLIIESANTSYTNAWALAVTLF---ATSLTAVYSTRIIFYALmgRPRFSSLTSINENNPQLLNSI 452
Cdd:PRK06589 386 LSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVviaSSILSALYLLKILSSIY--KPSLSENSFITKSLPYLMQIS 463
|
410
....*....|....
gi 2172613261 453 KRLLIGSIIAGFIL 466
Cdd:PRK06589 464 VITCCCALTLFYFI 477
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
85-425 |
6.70e-25 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 108.32 E-value: 6.70e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 85 FSMLFIPVALFVTWSIMEFSMWYMHSDPfINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGwwYGRT-D 163
Cdd:PRK08377 79 FAALFVLIIAIVSFIMSIFSLKAVEVEP-IDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTA--YNKTgE 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 164 ANTAALQAILYNRIGDIGFVLAMAWF---LLNSNSWELQQLF-MMD--VSLFPLLGLLLAATGKSAQFGLHPWLPSAMEG 237
Cdd:PRK08377 156 AAEASMKYIVLGGIGSSFFLIGVALIygaTGTLNMAHIAQLAgTIDptVAQVGLALLIFGLAVEAELFPLNAWAPDAYQA 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 238 -PTPVSALLhSSTMVVAGVFLLIRFYPLMEHNK---VIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMV 313
Cdd:PRK08377 236 aPHPITVMF-SAFVVKAGLYAMARILYLMQNANgwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIAL 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 314 TIGINQP---HLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQdIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSK 390
Cdd:PRK08377 315 ALALGTQagvDAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSK 393
|
330 340 350
....*....|....*....|....*....|....*.
gi 2172613261 391 -DLIIESANTSYTnaWALAVTLFATSLTAVYSTRII 425
Cdd:PRK08377 394 fRIILAGLSAGYT--WPVALVLGASVVEAVYYFRLI 427
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
123-423 |
2.54e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 106.89 E-value: 2.54e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 123 LFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLF 202
Cdd:MTH00063 84 LFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLI-LFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGSFLCCLF 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 203 MMDVSLFpllglllaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLgAIT 282
Cdd:MTH00063 163 FFLIVFT-----------KSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLL-LLT 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 283 TLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIR-----KM 357
Cdd:MTH00063 231 IFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNcvyssIL 310
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2172613261 358 GGLFkaLPFTSSSLIIGslaLTGTPFLTGFYSKDLIIESANTSYTNAWALAVTLFATSLTAVYSTR 423
Cdd:MTH00063 311 YGSW--NLFYLFLLVLG---LSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFR 371
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
117-396 |
1.33e-23 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 105.36 E-value: 1.33e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 117 FFMYLllFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSW 196
Cdd:PRK06521 117 FFYNL--FLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSY 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 197 ELQQLFMMDVSLFPLLGLLLAAT-GKSAQFG---LHPWLPSAM-EGPTPVSALLhSSTMVVAGVFLLIRFYPLMEHNKVI 271
Cdd:PRK06521 195 DFAAMRAAHLSPFWASLVFLLALfGFGAKAGlvpLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGW 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 272 QT--LTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGI-------NQPHLAFL-------HICTHAFFKA 335
Cdd:PRK06521 274 WWgvLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLamvfiayGMPLLAALaltaalyHLLNHALFKS 353
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2172613261 336 MLFMCSGSIIHNLNdEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIES 396
Cdd:PRK06521 354 LLFLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQS 413
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
71-466 |
1.10e-22 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 101.82 E-value: 1.10e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 71 IQTFTLSMSFKLDYFSMLFIPVALFVTwSIMEFSMWYMHSDPfiNRFFMYLLLFLITMMILV-TSNNLFQLFIGWEGVGI 149
Cdd:PRK05846 69 IPRFGISYHLGVDGISLLLVVLTALLT-PLAVLASWEEIKKR--VKFYMAALLWLEGGVIGVfAALDLLLFYVFFEAMLI 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 150 MSFLLIGWWyGRTDANTAALQAILYNRIGDIGFVLAM----AWFLLNSNSWELQQLFMMDVSLFPLLGLLLA---ATG-K 221
Cdd:PRK05846 146 PMYFLIGVW-GGKNRIYAATKFFLYTLLGSLLMLVAIiylvVVYYNATGTFDIADLLNLPLPPGVQYWLFLAffiAFAvK 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 222 SAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGVFLLIRF-YPLM-EHNKVIQTLTLCLGAITTLFTAICALTQNDIKK 298
Cdd:PRK05846 225 MPMFPLHTWLPDAHvQAPTAGSVLL-AGILLKMGAYGLLRFsLPLFpDASHEFAPIIITLGVIAIIYGALVALAQTDIKK 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 299 IIAFSTSSQLGLmmVTIGI---NQPHL--AFLHICTHAFFKAMLFMCSGSIIHNLNDEqDIRKMGGLFKALPFTSSSLII 373
Cdd:PRK05846 304 LIAYSSISHMGF--VTLGIfagNQLGIqgAIFQMISHGLSSAALFLLVGVLYDRLHTR-DIADYGGLAKVMPVLAAFFLF 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 374 GSLALTGTPFLTGFYSKDLIIESANTSYTnaWALAVTLFATSLTAVYSTRIIFYALMGRprfssltsINENNPQL--LNS 451
Cdd:PRK05846 381 FAMASLGLPGTSGFVGEFLILLGSFQVNP--VIAFIATTGLILAAVYSLWLYQRVMFGP--------VKNEVAKLkdLNG 450
|
410
....*....|....*
gi 2172613261 452 IKRLLIGSIIAGFIL 466
Cdd:PRK05846 451 RELLILLPLVALLLL 465
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-397 |
1.13e-21 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 99.30 E-value: 1.13e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 2 NMFSSLILTSLVTLLFPIFLTmsdyhkhvnypnyvKISIICALSFCMVPTLMFINSNYELIISNWHWMTIQTFTLSMSFK 81
Cdd:PRK08668 1 MELTLLLLTPLIGSVLAYLLK--------------KINEKIGVIGNALPLLFLIKLYFTLKVGTGEKLTLFFGGFKLTFT 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 82 LDYFSMLFIPVALFVTWSIMEFSMWYMHSDPfiNRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIgwWYGR 161
Cdd:PRK08668 67 LTHLSWFFAMISLLVIFSVAFFMVSEKTKND--AYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMV--PMGK 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 162 TDANTAALQAILYNRIGDIGFVLAMAW-------FLLNSNSWELQQLFMMDVSLFPLLGLLLAATGKSAQFGLHPWLPSA 234
Cdd:PRK08668 143 KESRKASLKYFVLSAIGAYAMLYAIFLiyaktgtFDFADISQGLINDTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDA 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 235 M-EGPTPVSALLhSSTMVVAGVF-LLIRFYPLM------EHNKVIQTLTL-----CLGAITTLFTAICALTQNDIKKIIA 301
Cdd:PRK08668 223 YsEAPQSFSAVL-SGQLSKLGAYgFLLVLYVLPgtklfsEFGTYRGVPLFnyilaWLGNISIIVGTLMAILQEDIKKLIA 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 302 FSTSSQLGLMMVTIGINQP---HLAFLHICTHAFFKAMLFMCSGSIIHNlNDEQDIRKMGGLFKALPFTSSSLIIGSLAL 378
Cdd:PRK08668 302 YSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIYR-TGTTKISEMGGLIEKMPFTFAMYLVAIISL 380
|
410
....*....|....*....
gi 2172613261 379 TGTPFLTGFYSKDLIIESA 397
Cdd:PRK08668 381 AGIPPMSGFASKWLIFEAL 399
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
61-433 |
5.65e-21 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 96.34 E-value: 5.65e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 61 LIISNWHWMTIQTFTLSmsFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPfINRFFMYLLLFLIT--MMILVTSNNLF 138
Cdd:COG1007 49 LLLLALGGGTGTAFGGM--FVVDGFALFFKLLILLAALLVLLLSRDYLERRG-LLRGEFYALLLFATlgMMLMASANDLL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 139 QLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLFMMDVSLFPLLGLLLAA 218
Cdd:COG1007 126 TLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAALAAGGANSPLLLLG 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 219 TG--------KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGVFLLIRF--YPLMEHNKVIQTLTLCLGAITTLFTA 287
Cdd:COG1007 206 LVlvlaglafKLSAVPFHMWTPDVYEGaPTPVTAFL-ATAPKIAAFAALLRLlvEAFPGLAADWQLLLAVLAVLSMTVGN 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 288 ICALTQNDIKKIIAFSTSSQLGLMMVTIGINQPH---LAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKAL 364
Cdd:COG1007 285 LAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLgvsAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRS 364
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 365 PFTSSSLIIGSLALTGTPFLTGFYSKDLIIESANTSytNAWALAVTLFATS-LTAVYSTRIIFYALMGRP 433
Cdd:COG1007 365 PLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEA--GLYWLAVIAVLNSvISAYYYLRVVKAMYFDEP 432
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
77-465 |
6.08e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 93.09 E-value: 6.08e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 77 SMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPfiNRFFMY-LLLFLITMMI-LVTSNNLFQLFIGWEGVGIMSFLL 154
Cdd:PRK07691 70 GIVFVADMFAALLVLTSSIITFLVILYSFQTIGIER--ERYYYYpSVLFMLAGVNgAFLTGDIFNLFVFFEVMLMASYVL 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 155 IGwwYGRTDAN-TAALQAILYNRIGDIGFVLAMAWFLLNSNSwelqqLFMMDVSLFPLLGLLlAATG------------- 220
Cdd:PRK07691 148 IV--IGGTKIQlRESIKYVLINVVSSAFFVVAVAILYSVVGT-----LNMADISVKIAELSA-GQTGlitvvailflfvf 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 221 --KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHN--KVIQTLTLCLGAITTLFTAICALTQNDI 296
Cdd:PRK07691 220 atKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHdtSFTHYLILILALLTIIFGVIGAVAYFDI 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 297 KKIIAFSTSSQLGLMMVTIGINQPHL---AFLHICTHAFFKAMLFMCSGSIIHnLNDEQDIRKMGGLFKALPFTSSSLII 373
Cdd:PRK07691 300 KKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFI 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 374 GSLALTGTPFLTGFYSKDLIIESANTSytNAWALAVTLFATSLTAVYST-RIIFYALMGRPRFsslTSINENNPqllnsI 452
Cdd:PRK07691 379 AALSLAGIPPLSGFYGKFFIVEGTFEA--GFYVSGIIVLLSSLLVLYSViKIFLKGFWGEPKG---YDLNNKVP-----V 448
|
410
....*....|...
gi 2172613261 453 KRLLIGSIIAGFI 465
Cdd:PRK07691 449 KKLLLPAVVLVAI 461
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
79-463 |
8.00e-19 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 89.62 E-value: 8.00e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 79 SFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDpfINRFFMY-LLLFLITMMI--LVTSNnLFQLFIGWEGVGIMSFLLI 155
Cdd:PRK12663 72 QFTGDSLSALMVTTASFVATAIMAYGFGDIEHS--GRRYGFPpFILLLMAGVIgsFLTGD-LFNLYVWFEVMLIASFVLI 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 156 GWWyGRTDANTAALQAILYNRIGDIGFVLAMAWFL-----LNSNSWELQQLFMMDVSLFPL--LGLLLAATGKSAQFGLH 228
Cdd:PRK12663 149 TLG-QEREQLRGAIKYVVLNLIGSWLFLLGIGLLYgtfgtLNMAHIAMRLNDMGDTATLTTiaLLFLLAFGMKAALFPFM 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 229 pWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLM--EHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSS 306
Cdd:PRK12663 228 -WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVIS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 307 QLGLMMVTIGINQP---HLAFLHICTHAFFKAMLFMCSGSIIHnLNDEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPF 383
Cdd:PRK12663 307 SIGFILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPP 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 384 LTGFYSKDLIIESANTSytNAWALAVTLFATSLTAVYSTRIIFYALMGRPRFSSLTSINENNPQLLNSIKRLLIGSIIAG 463
Cdd:PRK12663 386 FSGFWGKVLLVQGALDN--GAYILLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILAVVVIAMG 463
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
114-425 |
2.16e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 88.25 E-value: 2.16e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 114 INRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTdANTAALQAILYNRIG------DIGFVLAMA 187
Cdd:PRK12662 109 IPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-ALVAAFEYLIIGTIGatfyliGIGFLYAIT 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 188 WFLLNSNSWE-LQQLFMMDVSLFPLLGLLLAATGKSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGVFLLIR-FYPL 264
Cdd:PRK12662 188 GTLNMGDMFLiIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRiVYDV 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 265 MEHNKVIQTLT-----LCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGINQPH---LAFLHICTHAFFKAM 336
Cdd:PRK12662 267 FKANFVFTTLPfnnvfMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSA 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 337 LFMCSGSIIHNLnDEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESANTSytNAWALAVTLFATS- 415
Cdd:PRK12662 347 LFMVSGSISYHF-GTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKS--NAWIGLVVLLVGSg 423
|
330
....*....|
gi 2172613261 416 LTAVYSTRII 425
Cdd:PRK12662 424 LSVIYVWKIV 433
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
35-349 |
2.99e-18 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 88.17 E-value: 2.99e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 35 YVKISIICALSFCMVPTLMFINSNYELIISNWHwmtiqtftlsmSFKLDYFSMLFIpvaLFVTWSIMEFSMWYMHSDPFI 114
Cdd:PRK08601 37 YVRIHIGILALPSLVALLGLIGANGDVVVGPWH-----------LDTLAWLMAFFV---LTLGFIIQRFSVRYLLGDRSY 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 115 NRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSN 194
Cdd:PRK08601 103 RKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGLNKGWKVAREAAKISGMLFLISWLALALAIVWLFIATG 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 195 SWELQQLFMMD--------VSLFPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSStMVVAGVFLLIRFYPLMe 266
Cdd:PRK08601 183 EWQLTSVLSNEnlaqlgtwEKTGINLLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLF- 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 267 HNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIH 346
Cdd:PRK08601 261 HDDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVP 340
|
...
gi 2172613261 347 NLN 349
Cdd:PRK08601 341 RFN 343
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
56-389 |
2.31e-17 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 85.08 E-value: 2.31e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 56 NSNYELIiSNWHWmtIQTFTLSMSFKLDYFSMLFIPVALFVTwSIMEFSMWYMHSDPfinRFFMYLLLFLITMMILV-TS 134
Cdd:PRK12561 34 SSSLQLV-ERYAW--LPQIGLEWSLGVDGLSMPLVLLSGLIT-TLSIFASWKVTRKP---RLFYFLMLVLYSAQIGVfLA 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 135 NNLFQLFIGWEGVGIMSFLLIGWWYGRtDANTAALQAILYNRIGDIGFV---LAMAwFLLNSNSWELQQLFMMDVSLFPL 211
Cdd:PRK12561 107 QDLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASIFILvagLALA-LSGDTFTFDLAELGAKSYPLALE 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 212 LGLLLA---ATG-KSAQFGLHPWLPSAM-EGPTPVSallhsstMVVAGVFL------LIRFYPLM--EHNKVIQTLTLCL 278
Cdd:PRK12561 185 LLLYAGfliAFGvKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggyaLIRFNVQMlpDAHVYFAPALAIL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 279 GAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTI------GINQphlAFLHICTHAFFKAMLFMCSGSI---IHNLN 349
Cdd:PRK12561 258 GVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIaaftdlGISG---AMLQMISHGLIAAALFFLTGVTyerTHTLS 334
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2172613261 350 deqdIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYS 389
Cdd:PRK12561 335 ----IPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
221-419 |
2.64e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 81.72 E-value: 2.64e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 221 KSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGVFLLIRFYPLMEHNKVIQT---LTLCLGAITTLFTAICALTQNDI 296
Cdd:PRK08676 219 KSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAEQfsnVLIGLGIFSIAVAAFSMLSQRNL 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 297 KKIIAFSTSSQLGLMMVTIGINQPHLAF---LHICTHAFFKAMLFMCSGsIIHNLNDEQDIRKMGGLFKALPFTSSSLII 373
Cdd:PRK08676 298 KKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQPVAAWGVIL 376
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2172613261 374 GSLALTGTPFLTGFYSK-DLIIESANTSytnAWALAVTLFATSLTAV 419
Cdd:PRK08676 377 GSAAIIGMPPFPLFLSKfFILLQLGGIS---VWLVLAVLLLLLLAAS 420
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
79-427 |
7.85e-16 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 80.25 E-value: 7.85e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 79 SFKLDYFSMLFIPVALFVTWSIMEFSMWYMhSDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWW 158
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYL-EDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALR 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 159 YGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLFMMDVSLFPLLGLLLAATG--------KSAQFGLHPW 230
Cdd:PRK05777 147 RDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALADGSGNSLLLLFGLVfllvglafKLSAVPFHMW 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 231 LPSAMEG-PTPVSALLHSSTMVVA-GVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQL 308
Cdd:PRK05777 227 TPDVYEGaPTPVTAFLATAPKIAAfAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHA 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 309 GLMMVTIGINQPH---LAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLT 385
Cdd:PRK05777 307 GYLLVGLAAGTAEgysAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTA 386
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2172613261 386 GFYSKDLIIESANTSytNAWALAVTLFATSL-TAVYSTRIIFY 427
Cdd:PRK05777 387 GFWGKFYVFEAAVEA--GLWWLAVIGVLNSAiGAFYYLRVIKL 427
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
68-118 |
2.50e-14 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 67.45 E-value: 2.50e-14
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2172613261 68 WMTIQTFTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFF 118
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
227-396 |
2.47e-13 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 72.94 E-value: 2.47e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 227 LHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFyPLMEHNKVI--QTLTLCLGAITTLFTAICALTQNDIKKIIAFST 304
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTL-SLLGGNAPLwwGVALLVLGMITAFVGGLYALMEHNIQRLLAYHT 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 305 SSQLGLMMVTIG-------INQPHLAFL-------HICTHAFFKAMLFMCSGSIIHNlNDEQDIRKMGGLFKALPFTSSS 370
Cdd:PRK08042 278 LENIGIILLGLGagvtgiaLEQPALIALglvgglyHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISIA 356
|
170 180
....*....|....*....|....*.
gi 2172613261 371 LIIGSLALTGTPFLTGFYSKDLIIES 396
Cdd:PRK08042 357 MLVGLMAMAALPPLNGFAGEWVIYQS 382
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
221-434 |
2.63e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 72.69 E-value: 2.63e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 221 KSAQFGLHPWLP-SAMEGPTPVSA----LLhssTMVvaGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAICALTQND 295
Cdd:PRK12665 222 KAAVFPLSFWLPdSYPTAPAPVTAvfagLL---TKV--GVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSD 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 296 IKKIIAFSTSSQLGLMMVTIGINQPH---LAFLHICTHAFFKAMLFMCSGsIIHNLNDEQDIRKMGGLFKALPFTSSSLI 372
Cdd:PRK12665 297 IKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFF 375
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2172613261 373 IGSLALTGTPFLTGFYSKDLIIES-ANTSYTNAWALAVTLFATSLTAVYS-TRIIFYALMGRPR 434
Cdd:PRK12665 376 VPALNLGGIPPFSGFIGKVALLEAgAEDGTWLAWALVAGGVVTSLLTLYAvARVWTKAFWRARE 439
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
110-472 |
5.64e-12 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 68.19 E-value: 5.64e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 110 SDPFINR-FFMYLLLFLITMMIL--VTSNNLFQLFIGWEGVGIMSFLLIGWWyGRTDANTAALQAILYNRIGDI----GF 182
Cdd:PRK06473 99 SDESIQRpRFYYSLLLLLNAGVSgaFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGIlilvSF 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 183 vLAMAWfLLNSNSWELQQL----FMMDVSLFPLLGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGVFL 257
Cdd:PRK06473 178 -LGLVW-LSGASSFDYEPLrshtLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYG 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 258 LIRF--YPLMEHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGINQP---HLAFLHICTHAF 332
Cdd:PRK06473 255 LLRFgvGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPlsiLAAVFQMISHGL 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 333 FKAMLFMCSGsIIHNLNDEQDIRKMGGLF---KALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESANTSYTNAWALAv 409
Cdd:PRK06473 335 ISALLFLLVG-VVYKKTGSRDVDVLRGLLnpeRGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLC- 412
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2172613261 410 tLFATSLTAVYstriiFYALMGRPRFSSLTSINENNPQLLNSIKrlLIGSIIAGFILSYNIPP 472
Cdd:PRK06473 413 -MIGTGLTAVY-----FLLLVNRVFFGRLTAELSNLPRVLWSER--LPALVLAVLIVVLGIQP 467
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
71-472 |
2.59e-11 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 66.27 E-value: 2.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 71 IQTFTLSMSFKLDYFSMLFIPVALFVTWsIMEFSMWYMHSDPfinRFFmYLLLFLITMMI--LVTSNNLFQLFIGWEGVG 148
Cdd:PRK07363 66 NEPLGLSYSLGVDGLSLPLLVLNSLLTW-IAIYSIGENTERP---RLY-YSLILLINGGIagALLAQNLLLFFLFYELEL 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 149 IMSFLLIGWWYGRTDAnTAALQAILYNRIGD---IGFVLAMAWfLLNSNSWELQQLFMMDVSLFPLLGLLlaaTGKSAQF 225
Cdd:PRK07363 141 IPFYLLIAIWGGEKRG-YASIKFLIYTAVSGllvLAAFLGIVW-LSGSTSFDYDAISTQNLSLNTQLILL---TGLLLGF 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 226 G-------LHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRF-YPLMEHNKVIQTLTLCL-GAITTLFTAICALTQNDI 296
Cdd:PRK07363 216 GikiplvpLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFgLQLFPQTWSLVAPGLAIiGTISVIYGALSAIAQKDI 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 297 KKIIAFSTSSQLGLMMVTIGINQPHL---AFLHICTHAFFKAMLFMCSGsIIHNLNDEQDIRKMGGLF---KALPFTSSS 370
Cdd:PRK07363 296 KRMVAYSSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMnpiRGLPLTSAL 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 371 LIIGSLALTGTPFLTGFYSKDLIIESANTSYTNAWALAVTlfATSLTAVYstriiFYALMGRPRFSSLTSINENNPQLLN 450
Cdd:PRK07363 375 LVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIV--ASGLTAVY-----FVILLNRTCFGRLDNKLAYYPKVLW 447
|
410 420
....*....|....*....|..
gi 2172613261 451 SIKrlLIGSIIAGFILSYNIPP 472
Cdd:PRK07363 448 SEK--IPALILTALILFLGVQP 467
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
241-463 |
2.81e-11 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 65.82 E-value: 2.81e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 241 VSALLH--SSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGIN 318
Cdd:PRK06277 233 GSALLQtfSKFVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALG 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 319 QPH---LAFLHICTHAFFKAMLFMCSGsIIHNLNDEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIE 395
Cdd:PRK06277 313 TPLgivAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQ 391
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2172613261 396 SANTSytNAWALAVTLFATSLTAVYSTRIIFYALMGRPRFSSLTSINENNPQL-LNSIKRLLIGSIIAG 463
Cdd:PRK06277 392 AAMQA--NMPELAIIMIIVSIGTFVSMMKAFYLIYLKPKPEELEYKNKKVPKYaVFSLAVLTILCIILG 458
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
66-390 |
5.09e-10 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 61.94 E-value: 5.09e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 66 WHWMTIQTFTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMH-SDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGW 144
Cdd:CHL00049 61 FQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAL 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 145 EGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAMAW-FLLNSNSWELQQL------FMMDVSLFPLLGLLLA 217
Cdd:CHL00049 141 ECLSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVYGFSWlYGLSGGEIELQEIvnglinTQMYNSPGISIALIFI 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 218 ATG---KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGVFLLIR-----FYPLMEHNKVIQTLTLCLGAITTLFTAI 288
Cdd:CHL00049 221 TVGigfKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRifdipFYFSSNEWHLLLEILAILSMILGNLIAI 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 289 calTQNDIKKIIAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFkaMLFMCSGS----IIHNLNDEQD-IRKMGGLFKA 363
Cdd:CHL00049 300 ---TQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTGTDnIRDYAGLYTK 374
|
330 340
....*....|....*....|....*..
gi 2172613261 364 LPFTSSSLIIGSLALTGTPFLTGFYSK 390
Cdd:CHL00049 375 DPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
227-395 |
2.44e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 59.07 E-value: 2.44e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 227 LHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLirfypLMEHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSS 306
Cdd:MTH00112 111 FHFWLPEVLQGSTTTTALILSTWQKLAPLTLL-----LMTSNSLNPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 307 QLGLMMVTIGINqPHLAFLHICTHAFFKAMLFMcsgsiIHNLNDEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTG 386
Cdd:MTH00112 186 HLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL-----TLNTTSTKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTG 259
|
....*....
gi 2172613261 387 FYSKDLIIE 395
Cdd:MTH00112 260 FMPKWLILQ 268
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
78-421 |
1.62e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 54.16 E-value: 1.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 78 MSFKLDYFSMLFIPVALFVTWSIMEFSmWymHSDPFINRFFMYLLLFLITMMILVTSN-NLFQLFIGWEGVGIMSFLLIG 156
Cdd:MTH00226 96 LVFAVDGISIYFIILTGFIVPCSILIS-W--HSVKYLTKSFLICMLILEFLLYAVFSVlDIFMFYILFEGVLIPMYLILG 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 157 WWYGRTDANTAALQAILYNRIGDIGFVLAM----------AWFLLNSNSWELQQlfmmDVSLFPLLGLLLAATGKSAQFG 226
Cdd:MTH00226 173 IWGSREEKMQAAYYFFFYTLIGSVLMLLCLfslynihgttDYLTLASCSHVVSE----QTQKWIFLGIFLAMAVKIPIFP 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 227 LHPWLPSA-MEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHN-KVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFST 304
Cdd:MTH00226 249 FHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGaQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSS 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 305 SSQLGLMMVT------IGINQPHLAFLhicTHAFFKAMLFMCSgSIIHNLNDEQDIRKMGGLFKALPFTSSSLIIGSLAL 378
Cdd:MTH00226 329 VAHMGLVSITlvthdiIGLTGSIFIML---AHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLAN 404
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 2172613261 379 TGTPFLTGFYSKDLIIESANTsytnaWALAVTLFATS---LTAVYS 421
Cdd:MTH00226 405 VAVPPSGNFIGEYLSILSSFN-----WNPIIGVFVCSgviLSAVYS 445
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
45-315 |
7.08e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 52.08 E-value: 7.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 45 SFCMVPTLMFINSnyeLIISNWHWMTIQTFTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLF 124
Cdd:MTH00163 20 SWWLVQSLLFLLS---FLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKNNYSNLFLFLILFL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 125 LITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQL-FM 203
Cdd:MTH00163 97 LIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFLLnFF 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 204 MDVSLFPLLGLLLAATGKSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGVFL------LIRFYPLMEH-NKVIQTLT 275
Cdd:MTH00163 177 GSLNFLWYLSMILAFLVKMPMFFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLLRVMSFFSKlGLKFNYIW 249
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 2172613261 276 LCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTI 315
Cdd:MTH00163 250 ISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGL 289
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
79-390 |
8.51e-07 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 51.98 E-value: 8.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 79 SFKLDYFSMLFIPVALFVTWSIMEFSMWYM-HSDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGw 157
Cdd:PRK02504 73 SFNADNLSIAFRAIIALSTLVTLLMSWRYVeQSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTG- 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 158 wYGRTDA--NTAALQAILynrIGdigfVLAMAWFL--------LNSNSWELQQL---FMMDVSLFPLLGLLLAATG---K 221
Cdd:PRK02504 152 -YMKRDPrsNEAALKYLL---IG----AASSAIFLygssllygLSGGSTQLSAIalaLITSPSLGLALALVFVIAGiafK 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 222 SAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGVFLLIRFyplmehnkviqtLTLCLGAITT----LFTA--------- 287
Cdd:PRK02504 224 ISAVPFHQWTPDVYEGsPTPVVAFL-SVGSKAAGFALAIRL------------LVTAFPSFDEqwklLFTAlailsmvlg 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 288 -ICALTQNDIKKIIAFSTSSQLGLMMvtIGinqphlafLHICTHAFFKAM-------LFMCSGS----IIHNLNDEQD-I 354
Cdd:PRK02504 291 nVVALAQTSMKRMLAYSSIGQAGFVM--IG--------LVAGTEAGYASMvfyllayLFMNLGAfacvILFSLRTGTDqI 360
|
330 340 350
....*....|....*....|....*....|....*.
gi 2172613261 355 RKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSK 390
Cdd:PRK02504 361 SDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
71-427 |
1.40e-06 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 51.10 E-value: 1.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 71 IQTFTLSMSFKLDYFSMLFIPVALFVTwSIMEFSMWYMHSDPfinRFFMYLLLFLITMMI-LVTSNNLFQLFIGWEGVGI 149
Cdd:CHL00011 71 INFFDFHWRLGIDGLSIGPILLTGFIT-TLATLAAWPVTRNS---RLFYFLMLAMYSGQIgLFSSRDLLLFFIMWELELI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 150 MSFLLIGWWYGRTDAnTAALQAILYNRIGDIGF---VLAMAWFLLNSNSWELQQL----FMMDVSLFPLLGLLLAATGKS 222
Cdd:CHL00011 147 PVYLLLSMWGGKKRL-YSATKFILYTAGGSIFLligVLGMGLYGSNEPTLNFETLanqsYPVALEILFYIGFLIAYAVKL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 223 AQFGLHPWLPSamegpTPVSAllHSST-MVVAGVFL------LIRF-YPLMEHNKVIQTLTLCL-GAITTLFTAICALTQ 293
Cdd:CHL00011 226 PIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLIRInMELLPHAHSIFSPWLVIvGAIQIIYAASTSLGQ 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 294 NDIKKIIAFSTSSQLGLMMVTIG-INQPHL--AFLHICTHAFFKAMLFMCSGSI---IHNLNDEQdirkMGGLFKALP-- 365
Cdd:CHL00011 299 RNLKKRIAYSSVSHMGFIIIGIGsITDTGLngAILQIISHGFIGAALFFLAGTSydrIRLVYLDE----MGGIAIPMPki 374
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2172613261 366 FTS-SSLIIGSLALTGtpfLTGFYSKDL----IIESANTSYT-NAWALAVTLFATSLTAVYS---TRIIFY 427
Cdd:CHL00011 375 FTMfSSFSMASLALPG---MSGFVAELIvffgIITSQKYLLMpKILITFVMAIGMILTPIYLlsmLRQMFY 442
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
76-427 |
2.77e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 50.09 E-value: 2.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 76 LSMSFKLDYFSMLFIPVALFVTwSIMEFSMWYMHSDPfinRFFMYLLLFLITMMILVTS-NNLFQLFIGWEGVGIMSFLL 154
Cdd:PRK02546 79 LTWSVGADGLSMPLILLTGFIT-TLAVLAAWPVTFKP---KLFYFLMLAMYGGQIAVFAvQDMLLFFLAWELELIPVYLL 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 155 IGWWYGRtDANTAALQAILYNRIGDIgFVL----AMAwFLLNSNSWELQQLFMMDVSLFPLLGLLLA---ATG-KSAQFG 226
Cdd:PRK02546 155 LAIWGGK-KRQYAATKFILYTAGSSL-FILlaalAMA-FYGDTPTFDMTALAAKDFGLGFQLLCYAGlliAYGvKLPIVP 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 227 LHPWLPSAM-EGPTPVSALLhsstmvvAGVFLLIRFYPLMEHN--------KVIQTLTLCLGAITTLFTAICALTQNDIK 297
Cdd:PRK02546 232 LHTWLPDAHgEATAPVHMLL-------AGILLKMGGYALLRMNagmlpdahAQFAPLLIVLGVVNIIYAALTSFAQRNLK 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 298 KIIAFSTSSQLGLMMVTIGINQP---HLAFLHICTHAFFKAMLFMCSGSI---IHNLNDEQdirkMGGLFKALP-----F 366
Cdd:PRK02546 305 RKIAYSSISHMGFVLIGIGSFTDlgtSGAMLQMISHGLIGASLFFLVGATydrTHTLMLDE----MGGVGQKMRkmfamW 380
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2172613261 367 TSSSLiiGSLALTGtpfLTGFYSKDLIIESANTS--YTNAWALAVTLFATS---LTAVY---STRIIFY 427
Cdd:PRK02546 381 TACSL--ASLALPG---MSGFVAELMVFVGFATSdaYTLPFRVVVVFLAAVgviLTPIYllsMLREIFF 444
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
276-498 |
3.11e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 50.11 E-value: 3.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 276 LCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGINQPH-----LAFLHICTHAFFKAMLFMCSGSIIhNLND 350
Cdd:PRK12664 205 LFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVI-NRTR 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 351 EQDIRKMGGLFKAlPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESANTSYTNAWALAVTLFATSLTAVYSTRIIFYALM 430
Cdd:PRK12664 284 KFNLNRVGGLFKM-SLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYKKLFLICSLLLFASVGLKFFWYA 362
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2172613261 431 GRPRFSSLTSINENNPQLLNSIKRLLIGSIIAG----FILSYNIPPmnIPVLTMPIYLKLTALLVTILGFVI 498
Cdd:PRK12664 363 FISKSKSKPEAEKVYIGSKLSMIILVLICVVLGmfnsYLLFYNLPS--FVYTLKSVALQLGLILGTTLLFIC 432
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
88-317 |
3.22e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 50.05 E-value: 3.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 88 LFIPVALFVTWSIMEFsmwymhsdpFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTA 167
Cdd:MTH00217 91 LLTPICILISWNSIKF---------LIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQA 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 168 ALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQL----FMMDVSLFPLLGLLLAATGKSAQFGLHPWLPSA-MEGPTPVS 242
Cdd:MTH00217 162 SYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALcclkIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAhVEAPVAGS 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 243 ALLhsstmvvAGVFL------LIRF-YPLM-EHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLmmVT 314
Cdd:MTH00217 242 VIL-------AGVLLklggygFIRFsWPLLpEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGL--VT 312
|
...
gi 2172613261 315 IGI 317
Cdd:MTH00217 313 LGI 315
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
228-461 |
5.46e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 48.87 E-value: 5.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 228 HPWLPSAMEG-PTPVSALLhsSTMVVAGVF-LLIRFYPLMEhnkviqtLTLCLGAITTLFTAICALTQNDIKKIIAFSTS 305
Cdd:MTH00196 115 HMWAPDVYEGaPTKTTALL--AIVPKLGIFsILVSIGLNVN-------ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGI 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 306 SQLGLMMVTIGINQphLAFLHIC-THAFFKAMLFMCSGSIIHNLNDEQD-IRKMGGLFKALPFTSSSLIIGSLALTGTPF 383
Cdd:MTH00196 186 GHMGFVLWGIEIGS--FESIQASlVYLFIYIIMSICVFSIILALNVYKNlIIEFSGLSRRLPILAITLALTFLSIAGIPP 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 384 LTGFYSKDLIIESA-NTSYTNAWALAVtlFATSLTAVYSTRIIfYALMGRPRFSSLTSINE-NNPQLLNSIKRLLIGSII 461
Cdd:MTH00196 264 LVGFLGKWLILLSGvVYQYYLIFLLAV--FCSVIAGVYYVRIV-KILFFQANSFLLISTKIlKKENKINLRKALLIGFSL 340
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
82-316 |
1.28e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 48.25 E-value: 1.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 82 LDYFSMLFIPVALFVTWsimeFSMWYMHSDPFINrffMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWygr 161
Cdd:PRK06459 46 LSFFSIISTIVWILASL----YSIEYDHYGKWLS---SLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT--- 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 162 TDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLfmmdvslFPLLGLLLAATGKSAQFGLHP-----WLPSAM- 235
Cdd:PRK06459 116 KKNKRPAFVFMAFGELSTVLILAGFAWAFIISGTTNFSYL-------PSPVPLILASFGFIIKMGMMPflvseWLPIAHg 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 236 EGPTPVSALLhSSTMVVAGVFLLIRFYPLMEHNKV--IQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMV 313
Cdd:PRK06459 189 NAPSNFSAIL-SATMTLMGVYGILKMTILTQTIPIgyFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILV 267
|
...
gi 2172613261 314 TIG 316
Cdd:PRK06459 268 ALG 270
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
86-481 |
1.53e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 47.75 E-value: 1.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 86 SMLFIPVALFVTWSIMEFsmwymhsdpFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDAN 165
Cdd:MTH00204 92 TTLLIPICILISWKSIKF---------LFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKV 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 166 TAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLFMMDVSLFPLLGLL----LAATGKSAQFGLHPWLPSA-MEGPTP 240
Cdd:MTH00204 163 RASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLSIQKWLLvgffLSLAVKIPQIPFHIWLPQAhVEAPVA 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 241 VSALLhSSTMVVAGVFLLIRF-YPLM-EHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLmmVTIGIN 318
Cdd:MTH00204 243 GSVIL-AGILLKLGGYGFLRFsWPLFpAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGL--VPLGLF 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 319 QPHL-----AFLHICTHAFFKAMLFMCSgSIIHNLNDEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLI 393
Cdd:MTH00204 320 THTIeglvaAVFLMLAHGFVSSALFIAV-TFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFS 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 394 IESANTSYTNAWALAvtLFATSLTAVYS----TRIIFYALMGRPRFSsltsiNENNPQLLNSIKRLLIGSIIAGFILSYN 469
Cdd:MTH00204 399 LLAAFEYSLGLGVLV--TSGMVWSAAYSlylyNRISFGGGSNYLLFS-----RDLNRRELLAILPLIIAIFLLGIVPFII 471
|
410
....*....|..
gi 2172613261 470 IPPMNIPVLTMP 481
Cdd:MTH00204 472 IDLVKNSLVFSP 483
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
118-468 |
1.82e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 47.27 E-value: 1.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 118 FMYLLLFLITMMILvTSNNLFQLFIGWEgVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWE 197
Cdd:MTH00200 8 LFILSLGLGTLLTF-SSSHWFLIWLGLE-INTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWG 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 198 LQQLfmmdVSLFPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNkviqtLTLC 277
Cdd:MTH00200 86 ISEM----LGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSN-----ILLL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 278 LGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGINqPHLAFLHicthaFFKAMLFMCSGSIIHNLNDEQDIRKM 357
Cdd:MTH00200 157 LGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLY-----LLLYVIITLTVFLLLNLLNSTKINSL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 358 GGLFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESAnTSYTNAWALAVTLFATSLTAVYSTRIIFYALMGRPRFSS 437
Cdd:MTH00200 231 SSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQEL-SKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQI 309
|
330 340 350
....*....|....*....|....*....|.
gi 2172613261 438 LTSINENNPQLLNSIKRLLIGSIIAGFILSY 468
Cdd:MTH00200 310 NMMSSWRTKSNSNLLVGLLLLLSILGLPLTP 340
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
43-421 |
2.47e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 46.86 E-value: 2.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 43 ALSFCMVPTLMFINSNYELIISNWHwMTIQTFTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFIN-RFFMYL 121
Cdd:MTH00206 19 KWLWRSTTFFSFLIALLFLLWFKWS-SEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEPINRqRIYITL 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 122 LLFLITMMILV-TSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAmawFLLNSNSWELQQ 200
Cdd:MTH00206 98 LIVLQLFLILFfSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIA---LLFLQNSLGSLS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 201 LFMMDVSLFPLLGLLLAATG-------KSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGVFL------LIRFYPLM- 265
Cdd:MTH00206 175 LYILYFSKLTTWNNNLWWLAcilaflvKLPLYGVHLWLPKAhVEAPV-------AGSMVLAGVLLklggygMMRIILILg 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 266 EHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTIGINQP---HLAFLHICTHAFFKAMLFmCSG 342
Cdd:MTH00206 248 PSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPwgfKGALLLMIAHGLVSSALF-CLA 326
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2172613261 343 SIIHNLNDEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESANTSYTnaWALAVTLFATSLTAVYS 421
Cdd:MTH00206 327 NLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSN--FTLPLLGLGFLFTAIYS 403
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
61-319 |
1.83e-04 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 44.35 E-value: 1.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 61 LIISNWHWMTIQTFTLSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNLFQL 140
Cdd:MTH00014 36 FTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMF 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 141 FIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQLFMMDVSLFPL----LGLLL 216
Cdd:MTH00014 116 YIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMSSMEPPSIYLMnlwwLITIL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 217 AATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKVIQTLTLCLGAITTLFTAICALTQND 295
Cdd:MTH00014 196 AFMVKMPLYTVHLWLPKAhVEAPVAGSMILAGILLKLGGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPD 275
|
250 260
....*....|....*....|....
gi 2172613261 296 IKKIIAFSTSSQLGLMMVTIGINQ 319
Cdd:MTH00014 276 LKSLIAYSSVGHMGLMTAGIMSNT 299
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
46-421 |
4.85e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 43.02 E-value: 4.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 46 FCMVPTLMFINSNYeLIISNWHWMTiqtfTLSMSFKLDYFSMLFIPVALFVTWSimeFSMWYMHSDPF------------ 113
Cdd:MTH00127 3 KILIPTLMLIPTTW-LTPAKWLWTT----TLAHSLLIALASLTWLKNLSETGWS---SLNLYMATDPLstpllvltcwll 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 114 ---------------INRFFMY--LLLFLITMMILVTSNNLFQLF-IGWEGVGIMSFLLIGWWYGRTDANTAALQAILYN 175
Cdd:MTH00127 75 plmilasqnhtapepINRQRMYitLLTSLQIFLILAFGATEIIMFyVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYT 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 176 RIGDIGFVLAMAWFLLNSNSWELQQLFMMDVSLFPLLGLLLAATG-------KSAQFGLHPWLPSA-MEGPTPVSallhs 247
Cdd:MTH00127 155 LAGSLPLLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGcllaflvKMPLYGVHLWLPKAhVEAPIAGS----- 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 248 stMVVAGVFLLIRFYPLMEHNKVIQTLTLCL----------GAITTlfTAICaLTQNDIKKIIAFSTSSQLGLMMVTIGI 317
Cdd:MTH00127 230 --MVLAAVLLKLGGYGMMRMMVMLDPLTKELsypfiilalwGIIMT--GSIC-LRQTDLKSLIAYSSVSHMGLVAGGILI 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 318 NQPHL---AFLHICTHAFFKAMLFmCSGSIIHNLNDEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLII 394
Cdd:MTH00127 305 QTPWGftgALILMIAHGLTSSALF-CLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMII 383
|
410 420
....*....|....*....|....*...
gi 2172613261 395 ESA-NTSYtnaWALAVTLFATSLTAVYS 421
Cdd:MTH00127 384 TSLfNWSP---WTLALTGLGTLITAGYS 408
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
227-395 |
1.50e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 41.06 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 227 LHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIrfyplMEHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSS 306
Cdd:MTH00070 111 FHFWLPEVLQGLDLTTGLILSTWQKLAPMALLI-----QISHLLNSNLLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 307 QLGLMMVTIGINqPHLAFLH-----ICTHAFFKAMLFMCSGSiihnlndeqdIRKMGGLFKALPFTSSSLIIGSLALTGT 381
Cdd:MTH00070 186 HLGWMIIILTFS-PHLTLLNlliylIMTSSMFLMLMNLNSTN----------INKLSSSWSKNPTLTSMMMLTLLSLGGL 254
|
170
....*....|....
gi 2172613261 382 PFLTGFYSKDLIIE 395
Cdd:MTH00070 255 PPTTGFIPKWLILQ 268
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
76-315 |
4.40e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 39.96 E-value: 4.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 76 LSMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPFINRFFMYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLI 155
Cdd:MTH00205 49 ISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILI 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 156 GWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLLNSNSWELQQL----FMMDVSLFPLLGLLLAATGKSAQFGLHPWL 231
Cdd:MTH00205 129 LGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNfplnFSDFYLFLYWIFLMLAFLVKLPMYFVHLWL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 232 PSA-MEGPTpvsallhSSTMVVAGVFL------LIRFYPLM-EHNKVIQTLTLCLGAITTLFTAICALTQNDIKKIIAFS 303
Cdd:MTH00205 209 PKAhVEAPV-------SGSMILAGVLLklggygLIRITSMLyKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYS 281
|
250
....*....|..
gi 2172613261 304 TSSQLGLMMVTI 315
Cdd:MTH00205 282 SVGHMGLMVVGV 293
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
228-440 |
4.76e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 39.38 E-value: 4.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 228 HPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMehnkvIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQ 307
Cdd:MTH00011 108 HFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHN-----ILPMMTSMAAMSALAGGLGGMNQTQLRPLLAYSSIGH 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 308 LGLMMVtIGINQPHLAFLHICTHAFFKAMLFMCSGSI-IHNLNDEQDIRKMGglfkalPFTSSSLIIGSLALTGTPFLTG 386
Cdd:MTH00011 183 MGWMTM-ISVFSPSMAILYFMTYIIITTPLMLLFAYLnAFSTKFNSKISSMS------QTTSMSLFIMLLSLGGLPPFTG 255
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 2172613261 387 FYSKDLIIESAnTSYTNAWALAVTLFATSLTAVYSTRIIFYALMGRPRFSSLTS 440
Cdd:MTH00011 256 FMPKLMAIETL-TSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTFSSLKS 308
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
76-311 |
9.12e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 38.67 E-value: 9.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 76 LSMSFKLDYFSMLFIPVALFVTwSIMEFSMWYMHSdpFINRFFMYLLLFLITMMILVT---SNNLFQLFIGWEGVGI-MS 151
Cdd:MTH00150 16 LSELFSVDSMSSLLISLSLWIS-GLMMLASQKSVK--LRNKSSSFSLLVLLLCLILVLafsVSSLLMFYFFFEASLIpTL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 152 FLLIGWWYgrtdaNTAALQAILYNRIGDIG------FVLAMAWFLLNSNSWEL--QQLFMMDVSLFPLLGLLLAATGKSA 223
Cdd:MTH00150 93 LLILGWGY-----QPERLQAGMYMMLYTVGaslpllLVILWMSSSYGSSFMLLisSLRKLLSSMGLWGLLVFLAFLVKLP 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172613261 224 QFGLHPWLPSA-MEGPTpvsallhSSTMVVAGVFL------LIRFYPLME-HNKVIQTLTLCLGAITTLFTAICALTQND 295
Cdd:MTH00150 168 MYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSlSSSSFSIFLISLSLWGGVLTSLICLRQSD 240
|
250
....*....|....*.
gi 2172613261 296 IKKIIAFSTSSQLGLM 311
Cdd:MTH00150 241 VKSLIAYSSVGHMSLV 256
|
|
| |
