|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 669.60 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 1 MLKILMPTTMLILTTWLTKPAWLWSTMTANSLLVATISLTWLKWDSESGwNSLNSSMATDPLSTPLLILTCWLLPLMILA 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPT-KNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 81 SQNHMSMEPLNRQRSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLP 160
Cdd:MTH00124 80 SQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 161 LLIALLMTQNNLGTLSMPLIQHLHQMKLHTHGDMMWWTACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 241 GYGMMRLIMMLTPMTKTLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAH 320
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 321 GLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTFNWSNWTLTMTGLG 400
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 62184406 401 MLITAIYSLHMFLTTQRGLTTNHIISIEPSHTREHLLMTMHALPMLLLILKPELIWGW 458
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 665.08 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 1 MLKILMPTTMLILTTWLTKPAWLWSTMTANSLLVATISLTWLKWDSEsGWNSLNSSMATDPLSTPLLILTCWLLPLMILA 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSE-TMNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 81 SQNHMSMEPLNRQRSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLP 160
Cdd:MTH00068 80 SQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 161 LLIALLMTQNNLGTLSMPLIQHLHQMKLHTHGDMMWWTACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 241 GYGMMRLIMMLTPMTKTLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAH 320
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 321 GLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTFNWSNWTLTMTGLG 400
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 62184406 401 MLITAIYSLHMFLTTQRGLTTNHIISIEPSHTREHLLMTMHALPMLLLILKPELIWGW 458
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-460 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 657.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 1 MLKILMPTTMLILTTWLTKPAWLWSTMTANSLLVATISLTWLKWDSESGWNsLNSSMATDPLSTPLLILTCWLLPLMILA 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLN-FSLLFFSDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 81 SQNHMSMEPLNRQRSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLP 160
Cdd:MTH00110 80 SQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 161 LLIALLMTQNNLGTLSMPLIQHLHQMKLHTHGDMMWWTACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 241 GYGMMRLIMMLTPMTKTLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAH 320
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 321 GLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTFNWSNWTLTMTGLG 400
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 401 MLITAIYSLHMFLTTQRGLTTNHIISIEPSHTREHLLMTMHALPMLLLILKPELIWGWSY 460
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 648.17 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 1 MLKILMPTTMLILTTWLTKPAWLWSTMTANSLLVATISLTWLKWDSESGWNSLNSSMATDPLSTPLLILTCWLLPLMILA 80
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 81 SQNHMSMEPLNRQRSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLP 160
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 161 LLIALLMTQNNLGTLSMPLIQHLHQMKLHTHGDMMWWTACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 241 GYGMMRLIMMLTPMTKTLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAH 320
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 321 GLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTFNWSNWTLTMTGLG 400
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 62184406 401 MLITAIYSLHMFLTTQRGLTTNHIISIEPSHTREHLLMTMHALPMLLLILKPELIWGW 458
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGW 458
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-455 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 560.33 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 3 KILMPTTMLILTTWLTKPAWLWSTMTANSLLVATISLTWLKWDSESGWNSLNSSMATDPLSTPLLILTCWLLPLMILASQ 82
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 83 NHMSMEPLNRQRSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLPLL 162
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 163 IALLMTQNNLGTLSMPLIQHLhqmKLHTHGDMMWWTACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 242
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFS---KLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 243 GMMRLIMMLTPMTKTLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGL 322
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 323 TSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTFNWSNWTLTMTGLGML 402
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 62184406 403 ITAIYSLHMFLTTQRGLTTNHIISIEPSHTREHLLMTMHALPMLLLILKPELI 455
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
1.13e-178 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 507.59 E-value: 1.13e-178
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 1 MLKILMPTTMLILTTWLTKPAWLWSTMTANSLLVATISLTWLKWDSESGWNSLNSSMATDPLSTPLLILTCWLLPLMILA 80
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 81 SQNHMSMEPLNRQRSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLP 160
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 161 LLIALLMTQNNLGTLSMPLIQHLHQMKLHTHGDMMWWTACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 241 GYGMMRLIMML-TPMTKTLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIA 319
Cdd:MTH00044 241 GYGLIRLINLFsLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 320 HGLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTFNWSNWTLTMTGL 399
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 62184406 400 GMLITAIYSLHMFLTTQRGLTTNHIISIEPSHTREHLLMTMHALPMLLLILKPELI 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNII 456
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
48-459 |
4.80e-132 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 387.66 E-value: 4.80e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 48 SGWNSLNSSMATDPLSTPLLILTCWLLPLMILASQNhmSMEPLNRQRSFISLLISLQTFLIMAFSATEIIMFYIMFEATL 127
Cdd:MTH00150 11 SSYESLSELFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 128 IPTLIIITRWGNQTERLNAGTYFLFYTLMGSLPLLIALLMTQNNLGTLSMPLIQHLHqmkLHTHGDMMWWTACLLAFLVK 207
Cdd:MTH00150 89 IPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLR---KLLSSMGLWGLLVFLAFLVK 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 208 MPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIMMLTPMTKTLAYPFIILALWGIIMTGSICLRQTDLKSLI 287
Cdd:MTH00150 166 LPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLI 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 288 AYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLAN 367
Cdd:MTH00150 246 AYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIIN 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 368 LALPPSTNLMGELLIITTTFNWSNWTLTMTGLGMLITAIYSLHMFLTTQRGLTTNHIISIEPSHTREHLLMTMHALPMLL 447
Cdd:MTH00150 326 MAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLL 405
|
410
....*....|..
gi 62184406 448 LILKPELIWGWS 459
Cdd:MTH00150 406 LILKSDLLFMWI 417
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
3.33e-130 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 383.74 E-value: 3.33e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 1 MLKILMPTTMLILTTWLTKPAWLwstmtANSLLVATISLTWLKWDSESGWNSLNSSMATDPLSTPLLILTCWLLPLMILA 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWL-----VQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 81 SQNHMSMepLNRQRSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLP 160
Cdd:MTH00163 76 SESVYKK--NNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 161 LLIALLMTQNNLGTLSMPLiqhlhqMKLHTHGDMMWWTACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00163 154 LLVGIFYLYNNSGSLSFFL------LNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 241 GYGMMRLIMMLTPMTKTLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAH 320
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGH 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 321 GLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTFNWSNWTLTMTGLG 400
Cdd:MTH00163 308 GLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLL 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 62184406 401 MLITAIYSLHMFLTTQRGLTTNHIISIEPSHTREHLLMTMHALPMLLLILKPELIWGW 458
Cdd:MTH00163 388 SFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-458 |
1.98e-119 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 356.74 E-value: 1.98e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 1 MLKILMPTTMLILTTwLTKPAWLWSTMTANSLLVATISLTWLKWDSESgWNSLNSSMATDPLSTPLLILTCWLLPLMILA 80
Cdd:MTH00014 1 MLKLIMPLISLLLLP-LIKYPWSWALTFSTLLLLSLFTLLNLYPMSAP-YSMFTESLSSDMLSAPLITLTLWITALMILA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 81 SQNHMSMEplNRQRSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLP 160
Cdd:MTH00014 79 SFKIFQNN--KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLP 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 161 LLIALLMTQNNLGTLSMPLIQHLHQMKLHTHgdmMWWTACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00014 157 LLMSILLIFYTNNSLSMLMSSMEPPSIYLMN---LWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 241 GYGMMRLIMMLTPMTKTLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAH 320
Cdd:MTH00014 234 GYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAH 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 321 GLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTFNWSNWTLTMTGLG 400
Cdd:MTH00014 314 GLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAIT 393
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 62184406 401 MLITAIYSLHMFLTTQRGLTTNHIISIEPSHTREHLLMTMHALPMLLLILKPELIWGW 458
Cdd:MTH00014 394 SFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNW 451
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
5-455 |
1.57e-117 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 351.59 E-value: 1.57e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 5 LMPTTMLILTTWLTKPAWLWSTMTaNSLLVATISLTWLKWDSESGWNSLNSSMATDPLSTPLLILTCWLLPLMILASQNH 84
Cdd:MTH00205 2 SIFGVFSLLIILFVLKFKDWSFFS-NLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 85 MSMEplNRQRSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLPLLIA 164
Cdd:MTH00205 81 FKSN--KNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 165 LLMTQNNLGTLSMPLIQHLHQMKLHThgdMMWWTACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGM 244
Cdd:MTH00205 159 LFFLNSLNFSLSMFFNFPLNFSDFYL---FLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGL 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 245 MRLIMMLTPMTKTLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTS 324
Cdd:MTH00205 236 IRITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCS 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 325 SALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTFNWSNWTLTMTGLGMLIT 404
Cdd:MTH00205 316 SGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLS 395
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 62184406 405 AIYSLHMFLTTQRGLTTNHIISIEPSHTREHLLMTMHALPMLLLILKPELI 455
Cdd:MTH00205 396 GAYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIF 446
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
56-459 |
2.24e-89 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 280.43 E-value: 2.24e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 56 SMATDPLSTPLLILTCWLLPLMILASQNHMSmeplNRQRSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIIT 135
Cdd:COG1008 77 HLGVDGISLPLVLLTALLTPLAILASWNEIK----KRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 136 RWGNQtERLNAGTYFLFYTLMGSLPLLIALLMTQNNLGTLSMpLIQHLHQMKLHTHGDMMWWTACLLAFLVKMPLYGVHL 215
Cdd:COG1008 153 IWGGE-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHT 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 216 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIMMLTPM-TKTLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGH 294
Cdd:COG1008 231 WLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSH 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 295 MGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPST 374
Cdd:COG1008 311 MGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTS 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 375 NLMGELLIITTTFNWSNWTLTMTGLGMLITAIYSLHMFLTTQRGLTTNHIISIEPSHTREHLLMTMHALPMLLLILKPEL 454
Cdd:COG1008 391 GFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQP 470
|
....*
gi 62184406 455 IWGWS 459
Cdd:COG1008 471 LLDLI 475
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
53-450 |
2.35e-83 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 265.14 E-value: 2.35e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 53 LNSSMATDPLSTPLLILTCWLLPLMILASQNHMSmeplNRQRSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLI 132
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTALLTPLAVLASWEEIK----KRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYF 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 133 IITRWGnQTERLNAGTYFLFYTLMGSLPLLIALL----MTQNNLGTLSmplIQHLHQMKLHTHGDMMWWTACLLAFLVKM 208
Cdd:PRK05846 150 LIGVWG-GKNRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFD---IADLLNLPLPPGVQYWLFLAFFIAFAVKM 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 209 PLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIMMLTP-MTKTLAYPFIILALWGIIMTGSICLRQTDLKSLI 287
Cdd:PRK05846 226 PMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 288 AYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLAN 367
Cdd:PRK05846 306 AYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 368 LALPPSTNLMGELLIITTTFNWSNWTLTMTGLGMLITAIYSLHMFLTTQRGLTTNHIISIEPSHTREHLLMtmhaLPMLL 447
Cdd:PRK05846 386 LGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLIL----LPLVA 461
|
...
gi 62184406 448 LIL 450
Cdd:PRK05846 462 LLL 464
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
24-460 |
2.26e-76 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 246.39 E-value: 2.26e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 24 WSTMTANSLLVATISLTWLKWD-SESGWNS-----------LNSSMATDPLSTPLLILTCWLLPLMILASQNhmsmEPLN 91
Cdd:TIGR01972 28 WIALVVALATLLLSLLLLFQFDpTGSGFQFtedipwipalgISYHLGVDGISLLLVLLTALLTLLAILASWE----SIQK 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 92 RQRSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITRWGNQTeRLNAGTYFLFYTLMGSLPLLIALL-MTQN 170
Cdd:TIGR01972 104 RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPN-RIYAAMKFFLYTLAGSLLMLLAILgLYFL 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 171 NLGTLSMPLIQHLhqmKLHTHGDMMWWTACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIMM 250
Cdd:TIGR01972 183 GGGTFDLLELLNL---PLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLP 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 251 LTP-MTKTLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFC 329
Cdd:TIGR01972 260 LFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFL 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 330 LANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTFNWSNWTLTMTGLGMLITAIYSL 409
Cdd:TIGR01972 340 LVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYML 419
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 62184406 410 HMFLTTQRG-LTTNHIISIEPSHTREHLLMTMHALPMLLLILKPELIWGWSY 460
Cdd:TIGR01972 420 TLYKRVFFGeLSNPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLLDLTE 471
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
17-412 |
7.33e-75 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 242.65 E-value: 7.33e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 17 LTKPAWLWSTMTANSLLVATISLTWLKwDSESGWNSLNssMATDPLSTPLLILTCWLLPLMILASQNhmSMEPLNRQrsF 96
Cdd:MTH00217 39 LTATILLWASFDGEGQFQAIKKFEWIP-GIEPVFGPVV--FAVDGISIFFLILTALLTPICILISWN--SIKFLIKE--F 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 97 ISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLPLLIALLMTQNNLGTLS 176
Cdd:MTH00217 112 LLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTD 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 177 MpliQHLHQMKLHTHGDMMWWTACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIMMLTPMTK 256
Cdd:MTH00217 192 Y---QALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEAS 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 257 TLAYPFI-ILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFCLANTNY 335
Cdd:MTH00217 269 EYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLY 348
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 62184406 336 ERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTFNWSNWTLTMTGLGMLITAIYSLHMF 412
Cdd:MTH00217 349 ERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
58-450 |
3.83e-73 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 238.42 E-value: 3.83e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 58 ATDPLSTPLLILTCWLLPLMILASQNhmSMEPLNRQrsFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITRW 137
Cdd:MTH00204 80 AVDGVSLFFILLTTLLIPICILISWK--SIKFLFKE--FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIW 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 138 GNQTERLNAGTYFLFYTLMGSLPLLIALLMTQNNLGTLSMpliQHLHQMKLHTHGDMMWWTACLLAFLVKMPLYGVHLWL 217
Cdd:MTH00204 156 GSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDY---QILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 218 PKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIMMLTPMTKTLAYPFII-LALWGIIMTGSICLRQTDLKSLIAYSSVGHMG 296
Cdd:MTH00204 233 PQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVmLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMG 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 297 LVAAGILTQTPWGFTGATVLMIAHGLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNL 376
Cdd:MTH00204 313 LVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNF 392
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 62184406 377 MGELLIITTTFNWSNWTLTMTGLGMLITAIYSLHMFLTTQRGLTTNHIISIEPSHTREHLLMtmhaLPMLLLIL 450
Cdd:MTH00204 393 VGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELLAI----LPLIIAIF 462
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
17-455 |
4.29e-66 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 220.56 E-value: 4.29e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 17 LTKPAWLWSTMTanslLVATISLtWLKWDSESGWNSLNS-------------------SMATDPLSTPLLILTCWLLPLM 77
Cdd:MTH00226 44 LKRIALFWSFIS----LISTIIL-WLSLDQEGGFTPLMDidwiegpekiipiimggplVFAVDGISIYFIILTGFIVPCS 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 78 ILASQNHMSMeplnRQRSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMG 157
Cdd:MTH00226 119 ILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIG 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 158 SLPLLIALLMTQNNLGTLS-MPLIQHLHQMKLHTHGDMmwWTACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVL 236
Cdd:MTH00226 195 SVLMLLCLFSLYNIHGTTDyLTLASCSHVVSEQTQKWI--FLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIL 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 237 LKLGGYGMMRLIMMLTPM-TKTLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATV 315
Cdd:MTH00226 273 LKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIF 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 316 LMIAHGLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTFNWSNWTLT 395
Cdd:MTH00226 353 IMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGV 432
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 396 MTGLGMLITAIYSLHMFLTTQRGLTTNHIISIEPSHTREHLLMTMHALPMLLLILKPELI 455
Cdd:MTH00226 433 FVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRREFYITASMVFFAFLIGIYPIFI 492
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-400 |
1.65e-64 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 209.86 E-value: 1.65e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 113 ATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLPLLIALLMTQNNLGTLSMPLIQHLHQMKLHTHG 192
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 193 DMMWWTACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIMMLTPMTKTLAYPFIILALWGIIM 272
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 273 TGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFCLA-NTNYERTHSRTMILARGMQV 351
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 62184406 352 ILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTFNWSNWTLTMTGLG 400
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVV 289
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-411 |
9.53e-52 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 182.15 E-value: 9.53e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 53 LNSSMATDPLSTPLLILTCWLLPLMILASQNHMsmeplNRQRSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLI 132
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWKVT-----RKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 133 IITRWGNQtERLNAGTYFLFYTLMGSLPLLIALLMTQNNLGTLSMPLIQhLHQMKLHTHGDMMWWTACLLAFLVKMPLYG 212
Cdd:PRK12561 126 LISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAE-LGAKSYPLALELLLYAGFLIAFGVKLPIFP 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 213 VHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIM-MLTPMTKTLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSS 291
Cdd:PRK12561 204 LHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSS 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 292 VGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALP 371
Cdd:PRK12561 284 VSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALP 363
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 62184406 372 PSTNLMGELLI---ITTTFNWSNW----TLTMTGLGMLITAIYSLHM 411
Cdd:PRK12561 364 GMSGFVSELTVflgITSSDVYSSTfrtiTILLAAVGLILTPIYLLSM 410
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
60-411 |
8.91e-45 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 163.19 E-value: 8.91e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 60 DPLSTPLLILTCWLLPLMILASQnhmsmePLNRQ-RSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITRWG 138
Cdd:CHL00011 83 DGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 139 NQtERLNAGTYFLFYTLMGSLPLLIALL---MTQNNLGTLSMP-LIQHLHQMKLhthgDMMWWTACLLAFLVKMPLYGVH 214
Cdd:CHL00011 157 GK-KRLYSATKFILYTAGGSIFLLIGVLgmgLYGSNEPTLNFEtLANQSYPVAL----EILFYIGFLIAYAVKLPIIPLH 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 215 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIMMLTPMTKTLAYPF-IILALWGIIMTGSICLRQTDLKSLIAYSSVG 293
Cdd:CHL00011 232 TWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWlVIVGAIQIIYAASTSLGQRNLKKRIAYSSVS 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 294 HMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFCLANTNYERThsRTMILAR--GMQVILPLMTFWWLMMNLANLALP 371
Cdd:CHL00011 312 HMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMASLALP 389
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 62184406 372 PSTNLMGELL----IITTTFNWSNWTLTMT---GLGMLITAIYSLHM 411
Cdd:CHL00011 390 GMSGFVAELIvffgIITSQKYLLMPKILITfvmAIGMILTPIYLLSM 436
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
21-416 |
2.50e-44 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 160.31 E-value: 2.50e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 21 AWLWSTMTANSLLVATISLTWLKWDSES------GWNS-LNSSMATDPLSTPLLILTCWLLPLMILASQNHMSMEPlnRQ 93
Cdd:COG0651 29 QRALSLLASLALLALALALLLQVLAGGPlvyalgGWPApFGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHER--RG 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 94 RSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITRWGNQtERLNAGTYFLFYTLMGSLPLLIALLMTQNNLG 173
Cdd:COG0651 107 RRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATG 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 174 TLSMpliQHLHQMKLHTHGDMMWWTA--CLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIMML 251
Cdd:COG0651 186 TLNM---ADLAARLAELDPGLLLAAFalLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLL 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 252 --TPMTKTLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFC 329
Cdd:COG0651 263 fgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFL 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 330 LANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTFNWSNWTLTMTGL-GMLITAIYS 408
Cdd:COG0651 343 AAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLlSSLLTLAYF 422
|
....*...
gi 62184406 409 LHMFLTTQ 416
Cdd:COG0651 423 VRIFGRAQ 430
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
106-409 |
1.42e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 157.76 E-value: 1.42e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 106 FLIMAFSATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLPLLIALLmtqNNLGTLSMPLIQHlhq 185
Cdd:MTH00094 74 ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL---KNFFFFSLCYFDF--- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 186 mklhthgdMMWWTACL---LAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRlimMLTPMTKTLAYPF 262
Cdd:MTH00094 148 --------FLSWEMFFilsLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLR---ILGSLNFVYNNFW 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 263 IILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFCLANTNYERTHSRT 342
Cdd:MTH00094 217 IIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRL 296
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 62184406 343 MILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTFNWSNWTLTMTGLGMLITAIYSL 409
Cdd:MTH00094 297 IYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSL 363
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-411 |
2.88e-43 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 159.49 E-value: 2.88e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 53 LNSSMATDPLSTPLLILTCWLLPLMILASQNhMSMEPlnrqRSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLI 132
Cdd:PRK02546 79 LTWSVGADGLSMPLILLTGFITTLAVLAAWP-VTFKP----KLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 133 IITRWGNQtERLNAGTYFLFYTLMGSLPLLIALLMTQNNLGTLSMPLiQHLHQMKLHTHGDMMWWTACLLAFLVKMPLYG 212
Cdd:PRK02546 154 LLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDM-TALAAKDFGLGFQLLCYAGLLIAYGVKLPIVP 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 213 VHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIMMLTPMTKTLAYP-FIILALWGIIMTGSICLRQTDLKSLIAYSS 291
Cdd:PRK02546 232 LHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLGVVNIIYAALTSFAQRNLKRKIAYSS 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 292 VGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALP 371
Cdd:PRK02546 312 ISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALP 391
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 62184406 372 PSTNLMGELLIITTTFNWSNWTLT-------MTGLGMLITAIYSLHM 411
Cdd:PRK02546 392 GMSGFVAELMVFVGFATSDAYTLPfrvvvvfLAAVGVILTPIYLLSM 438
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
53-459 |
5.41e-40 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 150.24 E-value: 5.41e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 53 LNSSMATDPLSTPLLILTCWLLPLMILASQnhmsmEPLNRQRSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLI 132
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 133 IITRWGNQtERLNAGTYFLFYTLMGSLPLLIALLMTQNNLGTLSMPLIQHL-HQMKLHTHgdMMWWTACLLAFLVKMPLY 211
Cdd:PRK06473 146 LIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRsHTLPLSTQ--LLLLAPILVGFGIKIPLV 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 212 GVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIMMLTPMTKTLAYPFiiLALWGII--MTGSIC-LRQTDLKSLIA 288
Cdd:PRK06473 223 PFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPW--LATWAVVsvLYGASCaIAQKDMKKMVA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 289 YSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFCLANTNYERTHSRTMILARGM---QVILPLMTFWWLMMNL 365
Cdd:PRK06473 301 YSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVM 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 366 ANLALPPSTNLMGELLIITTTFNWSNWTLTMTGLGMLITAIYSLHMFLTTQRGLTTNHIISIEPSHTREHLLMTMHALPM 445
Cdd:PRK06473 381 ASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPRVLWSERLPALVLAVLI 460
|
410
....*....|....
gi 62184406 446 LLLILKPELIWGWS 459
Cdd:PRK06473 461 VVLGIQPSWLVRWT 474
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
41-387 |
1.53e-29 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 120.59 E-value: 1.53e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 41 WLKWDSESGwnsLNSSMATDPLSTPLLILTCWLLPLMILASQnhmsmEPLNRQRSFISLLISLQTFLIMAFSATEIIMFY 120
Cdd:PRK07363 62 YLPWNEPLG---LSYSLGVDGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFF 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 121 IMFEATLIPTLIIITRWGNQtERLNAGTYFLFYTLMGSLPLLIALLMTQNNLGTLSMPLiQHLHQMKLHTHGDMMWWTAC 200
Cdd:PRK07363 134 LFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDY-DAISTQNLSLNTQLILLTGL 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIMMLTPMTKTLAYPfiILALWGII--MTGS-IC 277
Cdd:PRK07363 212 LLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTIsvIYGAlSA 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 278 LRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFCLANTNYERTHSRTMILARG-MQVI--LP 354
Cdd:PRK07363 290 IAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGlMNPIrgLP 369
|
330 340 350
....*....|....*....|....*....|...
gi 62184406 355 LMTFWWLMMNLANLALPPSTNLMGELLIITTTF 387
Cdd:PRK07363 370 LTSALLVLAGMASAGIPGLVGFVAEFIVFQGSF 402
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-110 |
9.31e-29 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 109.15 E-value: 9.31e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 1 MLKILMPTTMLILTTWLTKPAWLWSTMTANSLLVATISLTWLKWDSESGWNSLNSSMATDPLSTPLLILTCWLLPLMILA 80
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 62184406 81 SQNHMSMEPLNRQRSFISLLISLQTFLIMA 110
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
60-382 |
4.72e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 104.67 E-value: 4.72e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 60 DPLSTPLLILTCWLLPLMILASQNHMSMEPLNRqrSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITRWGN 139
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPE--WYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 140 QTERLNAGTYFLFYTLMGSLPLLIALLMTQNNLGTLSMPLI-----QHLHQMKLHTHGDMMWWTACLLA-----FLVKMP 209
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLsakirGLSFPLTGGLAGNPPLALGVALAlalwaFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 210 LYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIMM-------LTPMTKTLAYPFIILALWGIIMTGSICLRQTD 282
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTifgispsLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 283 LKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLM 362
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340
....*....|....*....|
gi 62184406 363 MNLANLALPPSTNLMGELLI 382
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLL 418
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-407 |
1.07e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 103.42 E-value: 1.07e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 91 NRQRSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITRWGNQtERLNAGTYFLFYTLMGSLPLLIALLMTQN 170
Cdd:PRK08375 103 HRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYG 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 171 NLGTLSMPLiqhLHQMKLHTHGDMMWWTACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIM- 249
Cdd:PRK08375 182 VTGTLNMAD---LAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFt 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 250 ---MLTPMTKTLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSA 326
Cdd:PRK08375 259 vfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGA 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 327 LFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTFN-WSNWTLTMTGLGMLITA 405
Cdd:PRK08375 339 LFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLAL 418
|
..
gi 62184406 406 IY 407
Cdd:PRK08375 419 LY 420
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
201-448 |
2.48e-23 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 102.32 E-value: 2.48e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMR--LIMMLTPMTKTLAYPFIILALWGIIMTGSICL 278
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRyyILIDAAIGSDFPGRLLLIFGLLSVLVAAFFLL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 279 RQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTF 358
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGW 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 359 WWLMMNLANLALPPSTNLMGELLIITTTFNWSNWTLTMTGLGMLITAIYSLHMFLTTQRGLTTNHIISIEPSHTREHLLM 438
Cdd:PRK06458 381 GLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVRRVAGMVFGEPPEAVNRGDLGWLTTSPM 460
|
250
....*....|
gi 62184406 439 TMHALPMLLL 448
Cdd:PRK06458 461 FVHLVLVLVL 470
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
111-328 |
2.23e-17 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 84.66 E-value: 2.23e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 111 FSATEIIMFYIMFEATLIPTLIIITrWGNQTERLNAGTYFLFyTLMGSLPLLIALLMTQNNLGTLSMPLIQHlhQMKLHT 190
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADISQ--GLINDT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 191 HGDMMWWTACLL--AFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMrLIMMLTPMTK------------ 256
Cdd:PRK08668 191 STGFALIVFLFLlaFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFL-LVLYVLPGTKlfsefgtyrgvp 269
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 62184406 257 TLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALF 328
Cdd:PRK08668 270 LFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
86-455 |
2.85e-16 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 80.76 E-value: 2.85e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 86 SMEPLNRQRSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITrWGNQTERLNAGTYFLFYTLMGSLPLLIAL 165
Cdd:PRK12663 100 DIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGI 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 166 LMTQNNLGTLSMPLIQHLHQMKLHTHGDMMWWTACLLAFLVKMPLYGVHlWLPKAHVEAPIAGSMVLAAVLLKLGGYGMM 245
Cdd:PRK12663 179 GLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALI 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 246 RLIMMLTPMTKTLAYPFIILALWGIIMTGSI-CLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTS 324
Cdd:PRK12663 258 RVFTLLFPQERELLHPLLATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVK 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 325 SALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTFNWSNWTLTMTGLGMLIT 404
Cdd:PRK12663 338 TALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLI 417
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 62184406 405 AIYSL-HMFLTTQRGLTTNHIISIEPSHTREHLLMTMHALPMLLLILKPELI 455
Cdd:PRK12663 418 TMYSLfRIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILAVVVIAMGIAAEPL 469
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-340 |
6.89e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 76.53 E-value: 6.89e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 91 NRQRSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITrWGNQTERLNAGTYFLFYTLMGSLPLLIALLMTQN 170
Cdd:PRK07234 91 AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 171 NLGTLSMPLIQHlhqmklhthGDMMWWTACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIMM 250
Cdd:PRK07234 170 ANGTFAFSGLAT---------ADPEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 251 LTPMTKTLAYPFIILALWGIImtgsICLRQTDLKSLIAYSSVGHMGLVAAGILTqtpwgftgATVLMIAHGLTSSALFCL 330
Cdd:PRK07234 241 VPGLDLIVRIFGVGTALLGVL----FALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLC 308
|
250
....*....|
gi 62184406 331 ANTNYERTHS 340
Cdd:PRK07234 309 AGALPSRNFT 318
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
86-387 |
3.36e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 74.75 E-value: 3.36e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 86 SMEPLNRQRSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLPLLIAL 165
Cdd:PRK08376 113 YMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGI 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 166 LMTQNNLGTLSMPLIQHLHQMKLhTHGDMMWWTACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLaaVLLKLGG-YGM 244
Cdd:PRK08376 193 ALLYGQYGTLNMAYLAVKMSENP-TVVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYAL 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 245 MRLIMML---TPMTKTLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMG---------LVAAGILTQTPWGFT- 311
Cdd:PRK08376 270 ARVLFSIygpAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEIa 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 62184406 312 --GATVLMIAHGLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTF 387
Cdd:PRK08376 350 laGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSA 427
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
50-387 |
2.06e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 72.46 E-value: 2.06e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 50 WNSLNSSMATDPLSTPLLILTCWLLPLMILASQNHMSMEPLNRQRSFISLLISLQTF-LIMAFSATEIIMFYIMFEATLI 128
Cdd:PRK08667 66 APGLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMAL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 129 PTLIIITRWGNQTERLNAGTYFLFYTLMGSLPLLIALLMTQNNLGTLSMPLIQHlhqmklhTHGDMMWWTACL-LAFLVK 207
Cdd:PRK08667 146 SSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGA-------SAGILSLVFLLLfLGFGIK 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 208 MPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIM-MLTPmtkTLAYPFIIL------ALWGIIMTgsicLRQ 280
Cdd:PRK08667 219 AGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMdVLSP---ELWWGVLILlagsisALLGVIYA----LKE 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 281 TDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLM-----------IAHGLTSSALFCLANTNYERTHSRTMILARGM 349
Cdd:PRK08667 292 HDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGL 371
|
330 340 350
....*....|....*....|....*....|....*...
gi 62184406 350 QVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTF 387
Cdd:PRK08667 372 VKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
201-413 |
2.95e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 71.32 E-value: 2.95e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRL--IMMLTPMTKTLAYPFIILALWGIIMTGSICL 278
Cdd:PRK08676 213 FIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLsaLLRQSGAAEQFSNVLIGLGIFSIAVAAFSML 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 279 RQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFCLANTnYERTHSRTMILARGMQVILPLMTF 358
Cdd:PRK08676 293 SQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGI-LHRQYRSDRFDRIFDVFRLQPVAA 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 62184406 359 WWLMM-NLANLALPPSTNLMGELLIITTTFNWSNWtLTMTGLGMLITAIYSLHMFL 413
Cdd:PRK08676 372 WGVILgSAAIIGMPPFPLFLSKFFILLQLGGISVW-LVLAVLLLLLLAASSFAIFL 426
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
156-388 |
3.71e-12 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 68.25 E-value: 3.71e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 156 MGSLPLLIALLMTQNNLGTLSMPLIQHLHQMkLHTHGDMMWWTACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAV 235
Cdd:PRK08377 169 IGSSFFLIGVALIYGATGTLNMAHIAQLAGT-IDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAF 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 236 LLKLGGYGMMRLIMMLTPMT--KTLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGA 313
Cdd:PRK08377 248 VVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAG 327
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 62184406 314 TVLMIAHGLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTFN 388
Cdd:PRK08377 328 VFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLS 402
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
92-409 |
4.37e-12 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 68.53 E-value: 4.37e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 92 RQRSFISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTyfLFYTLMGSLPLLIALLMTQNN 171
Cdd:PRK12650 108 GNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQ 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 172 LGTLSMPLIqhLHQMKLHTHGDMMWWTACLLAFLV--KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRL-- 247
Cdd:PRK12650 186 TGTTSLSGI--LHSDVWAEKPGLTTVVAVLIAVAAftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFsp 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 248 IMMLTPMTKTLaypFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSAL 327
Cdd:PRK12650 264 VFHDVAVWNWL---LIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSL 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 328 FCLANTNYERTHSRTMILARGMQVILPLmTFWwlMMNLANL---ALPP-----STNLMGELLIITTTFNWSNWTLTMT-G 398
Cdd:PRK12650 341 FMLIGVVDHQAGTRDIRRLGSLWRRMPF-TFV--SVTIAALsmaAVPPlfgfvSKEGMLTAFLEAPGGNAGVVLLLVGaA 417
|
330
....*....|.
gi 62184406 399 LGMLITAIYSL 409
Cdd:PRK12650 418 LGAVFTFAYSA 428
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
10-328 |
1.09e-11 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 66.68 E-value: 1.09e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 10 MLILTTWLTKPAWLWSTMTANSLLVATISLTWLKWDSESGwNSLNSSMATDPLSTPLLILTCWLLPLMILASQNHMSMEP 89
Cdd:COG1007 20 LLLLDLFLPRRSRRLLAGLALLGLLLALALLLLALGGGTG-TAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRG 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 90 LNRQRSFISLLISLQTFLIMAfSATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGT-YFLFYTLMGSLPLL-IALL- 166
Cdd:COG1007 99 LLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGFLLYgISLLy 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 167 -MTqnnlGTLSMPLIQHlhQMKLHTHGDMMWWTACLL---AFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLlKLGGY 242
Cdd:COG1007 178 gAT----GSLNLAGIAA--ALAAGGANSPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAF 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 243 GM-MRLIMM-LTPMTKTLAYPFIILALwgIIMT-GSIC-LRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMI 318
Cdd:COG1007 251 AAlLRLLVEaFPGLAADWQLLLAVLAV--LSMTvGNLAaLAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLL 328
|
330
....*....|
gi 62184406 319 AHGLTSSALF 328
Cdd:COG1007 329 AYLFMNLGAF 338
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
101-383 |
1.48e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 66.15 E-value: 1.48e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 101 ISLQTFLI------MAFSATEIIMFYIMFEATLIPTLIIITRwGNQTERLNAGTYFLFYTLMGSLPLLIALLMTQNNLGT 174
Cdd:PRK12665 112 IFLPTYLIlvagvsNAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 175 LSMPLIQhLHQMKLHTHGDMMWWTACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIMMLTPm 254
Cdd:PRK12665 191 LNMADLA-VRLDELPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP- 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 255 TKTLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFCLANTN 334
Cdd:PRK12665 269 GGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLI 348
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 62184406 335 YERTHSRTMILARGMQVILPLMTFWWLM--MNLAnlALPPSTNLMGELLII 383
Cdd:PRK12665 349 ERQAGSSSLRRLGGLAKASPLLAVLFFVpaLNLG--GIPPFSGFIGKVALL 397
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
60-413 |
2.34e-11 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 65.38 E-value: 2.34e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 60 DPLSTPLLILTCWLLPLMILASQNHMSM--------EPLNRQRSFISLLISLQTFLIMAfsaTEIIMFYIMFEATLIPTL 131
Cdd:PRK06525 74 DPVSVLIGFVVVLLGLLVTLYSTGYMSPgnrehpvhEGTGRYYAFLLLFIGAMAGLVYS---STLLGLLLFFEITGLCSW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 132 IIITRWGNQTERLNAGTYFLFyTLMGSLPLLIALLMTQNNLGTLSMPLIQHLHQ-MKLHTHGDMMwwtaclLAFLVKMPL 210
Cdd:PRK06525 151 ALISYYQSPKALRSALKALLI-THIGSLGLYLAAATLFLQTGTFALSALSGLHGsLKYLVFLGIL------FAAWGKSAQ 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 211 YGVHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRLIMMLTPMTKTLAYPFIILALWGIIMTGSICLRQTDLKSLIAY 289
Cdd:PRK06525 224 LPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAY 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 290 SSVGHMGLVAAGILTQ---TPWGFTGATVLMIAHGLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLA 366
Cdd:PRK06525 303 STITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALA 382
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 62184406 367 NLALPPSTNLMGELLIITTTFNWSN--WTLTMTGLGMLITAIYSLHMFL 413
Cdd:PRK06525 383 ITGVPPFNGFFSKFPIFAAGFELSVeyWILLPAMVLLLIESVASFAWFL 431
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
73-383 |
3.03e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 64.94 E-value: 3.03e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 73 LLPLMILASQNHMSMEPLNRQRSFiSLLISLqTFLIMAFSATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLF 152
Cdd:MTH00062 52 LLVLFLGLYSQVMFYNLLSGVSRF-FLFLSL-IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLG 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 153 YTLMGSLPLLIALLMTQNNLGTLSMpliqhLHQMKLHTHGDMMWWTACLLaFLVKMPLYGVHLWLPKAHVEAPIAGSMVL 232
Cdd:MTH00062 130 YLLLTSLPLLLCLLYLSLVNGSFNF-----SDWGSDDSVSLIVYYVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 233 AAVLLKLGGYGMMRLIMMLTPMTkTLAYPFIILALWGIIMTGSicLRQTDLKSLIAYSSVGHMgLVAAGILTQTPWGFTG 312
Cdd:MTH00062 204 SGYIMKLGLLGVYRFCGFIFSGS-FLGYLFLCCLFSVFFLITA--CSELDGKRWLAFLSLSHI-LVPVLGLFVGDWSSIN 279
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 62184406 313 -ATVLMIAHGLTSSALFCLANTNYERTHSRTMIL-------ARGMQVILPLMtfwwlMMNLAnlALPPSTNLMGELLII 383
Cdd:MTH00062 280 lSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLlksgingSLVLRVIVVFS-----FLSLC--SFPPTIQFFCEVFLV 351
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-413 |
5.74e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 61.37 E-value: 5.74e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 96 FISLLISLQTFLimAFSaTEIIMFYIMFEATLIPTLIIITrWGNQTERLNAGTYFL----FYTLMGSLPLLIALLMTQNN 171
Cdd:PRK06589 121 FFNLTILIGVLI--ALS-SDLFTMFVCYELLTISTAFLIG-HTRNNISLSGGYKYLkilmISALLLFLPAVILIYTKTGN 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 172 LGTLSMPLIQHLHQMKLHThgdmmwwtaCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIMM- 250
Cdd:PRK06589 197 LDFVSGGLFSKNQSIILLL---------MFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYi 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 251 --LTPMTKTLA--YPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSA 326
Cdd:PRK06589 268 fgLSYLQRIFAefNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKIC 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 327 LFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTFNWSN-WTLTMTGLGMLITA 405
Cdd:PRK06589 348 LFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQpWLSIIVMLVVIASS 427
|
....*...
gi 62184406 406 IYSLHMFL 413
Cdd:PRK06589 428 ILSALYLL 435
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
118-372 |
7.01e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 61.06 E-value: 7.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 118 MFYIMFEA-TLIPTLIIITrwgNQTERLNAGTYFLfYTLM---GSLPLLIALLMTQNNLGTLSMPLIQHLHqmklhtHGD 193
Cdd:PRK06521 137 SFLVAWETmSLSSWFLVIA---NHREAEIRRAGFL-YLLMahaGALAILLAFGLLARESGSYDFAAMRAAH------LSP 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 194 MMWWTACLLAFL---VKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIMMLTPMTkTLAYPFIILALWGI 270
Cdd:PRK06521 207 FWASLVFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLGAP-GWWWGVLVLALGAI 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 271 IMTGSI--CLRQTDLKSLIAYSSVGHMGLV-----------AAGILTQTPWGFTGATVLMIAHGLTSSALFCLANTNYER 337
Cdd:PRK06521 286 SAVLGVlyALAEHDLKRLLAYSTIENIGIIfvglglamvfiAYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHA 365
|
250 260 270
....*....|....*....|....*....|....*....
gi 62184406 338 THSRTMI----LARGMQVILPLMtfwwLMMNLANLALPP 372
Cdd:PRK06521 366 TGTRDMEklggLIRRMPWTAWAF----LIGCLAISALPP 400
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
116-415 |
1.60e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 60.17 E-value: 1.60e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 116 IIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLPLLIALLMTQNNLGTLSMPLIqhLHQMKLHTHGDMM 195
Cdd:COG1009 133 LLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSEL--LAAAPTILSSPLL 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 196 WWtACLLAFLVKM------PLygvHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRL--IMMLTPMTKTLaypFIILA 266
Cdd:COG1009 211 TL-ILLLLLLGAFgksaqfPL---HFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLspLFALSPVWLTV---VAIIG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 267 LWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQtpwGFTGATVLMIAHGLTSSALFCLANTNYERTHSRTMILA 346
Cdd:COG1009 283 AITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKM 359
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 62184406 347 RGMQVILPLMtfWWLMM--NLANLALPPSTNLMGELLIITTTF---NWSNWTLTMTGLGMLITAIYSLHMFLTT 415
Cdd:COG1009 360 GGLRKKMPIT--AITFLigALSLAGIPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLV 431
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
84-449 |
2.30e-09 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 59.77 E-value: 2.30e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 84 HMSMEPLNRQRSFISLLISLQTFLIMAFSATEIIMfYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLPLLI 163
Cdd:PRK12646 101 YLSSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILM-YVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLV 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 164 ALLMTQNNLGTLSMP-LIQHLHQMKLHTHGDMMWWTACLLAFlVKMPLYGVHLWLPKAhVEAPIAGSMVL-AAVLLKLGG 241
Cdd:PRK12646 180 GFIMLYIMTGTNNITeILGQADHIKNHGLFIPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGI 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 242 YGMMRLIMMLTpMTKTLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAA-----GILTQTPWGFTGATVL 316
Cdd:PRK12646 258 FLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAmvgigGGYAQHQQDAIASIYV 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 317 MIA---------HGLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTfwwLMMNLANLALPPSTNLMGEL------- 380
Cdd:PRK12646 337 FVLfaalfhlmnHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMN---LVMTIAALSMAGVPFLNGFLskemfld 413
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 62184406 381 -LIITTTFNWSNWTLT--MTGLGM---LITAIYSLHMFLTTQRGLTTNHIISIEPSHtrEHLLMTMHALPMLLLI 449
Cdd:PRK12646 414 aLTQTGQLSQFSLISMiiIVFIGViasIFTFTYALYMVKEVFWGKYDSKVFTKKNIH--EPWLFSLPSLILMVLV 486
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
156-391 |
8.08e-09 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 57.91 E-value: 8.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 156 MGSLPLLIALLMTQNNLGTLSMPLIQHlhQMKLHTHGDMMWWTAcLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAV 235
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDM--RMQQLPLGSDIWLLG-VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 236 LLKLGGYGMMRLIMMLTPMTKTLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLV-------AAGILTQTP- 307
Cdd:PRK08042 222 VMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgagVTGIALEQPa 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 308 ---WGFTGATVLMIAHGLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIIT 384
Cdd:PRK08042 302 liaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQ 381
|
....*..
gi 62184406 385 TTFNWSN 391
Cdd:PRK08042 382 SFFKLSN 388
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
151-402 |
9.96e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 57.62 E-value: 9.96e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 151 LFYTLMGSLPLLIALLMTQNNLGTLSMPLIQHLHQMkLHTHGdmmWWTACLLAFLV----KMPLYGVHLWLPKAhVEAPI 226
Cdd:PRK12647 152 LLVTGGGGLALLAGLILLGNVTGTYSLSELLASGDV-IREHP---LYLAILLLVLGgaftKSAQFPFHFWLPNA-MEAPT 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 227 AGSMVL-AAVLLKLGGYGMMRLimmlTPMTKTLAYPFIILALWG---IIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGI 302
Cdd:PRK12647 227 PVSAYLhSATMVKAGIYLLARL----NPVLGGTPLWQTILPLFGgltMLTGALLAVRQTDLKLILAYSTVSALGTLVMLL 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 303 LTQTPWGFTGATVLMIAHGLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLI 382
Cdd:PRK12647 303 GLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELI 382
|
250 260
....*....|....*....|
gi 62184406 383 ITTTFNWSNWTLTMTGLGML 402
Cdd:PRK12647 383 YEALLEAPLWSLILTVAAVL 402
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
94-372 |
1.61e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 57.15 E-value: 1.61e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 94 RSFISLLISLQTFLIMAFSATEIIMFyIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLPLLIALLMTQNNLG 173
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 174 TLSMPLIQHLHQMKLHTHGDMMWWTACLLAFL------VKMPLYgvhLWLPKAhVEAPIAGSMVL-AAVLLKLGGYgmmr 246
Cdd:PRK12649 191 TYDIATILQDSELIENIKGHPLFLITLILIFIgaaaksAQGPFY---IWLPNA-MEAPTPVSAFLhSATMVKAGVY---- 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 247 LIMMLTPMTKTLAYPFIILALWGII---MTGSICLRQTDLKSLIAYSSVGH----MGLVAAGILTQTPWGFTGATVLMIA 319
Cdd:PRK12649 263 LVARIHPIFSGTEAWFILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISQlaylMTMYGYTTYHEPGLGVAAATFHLLN 342
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 62184406 320 HGLTSSALFCLANTNYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPP 372
Cdd:PRK12649 343 HATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-407 |
2.40e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 56.28 E-value: 2.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLI-----MMLTPMTKTLAYPFIILALWGIIMTGS 275
Cdd:PRK12662 216 MVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkANFVFTTLPFNNVFMILAALAIVFGSV 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 276 ICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFCLANTNYERTHSRTMILARGMQVILPL 355
Cdd:PRK12662 296 LAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPK 375
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 62184406 356 MTFWWLMMNLANLALPPSTNLMGELLIITTTFNWSNWT-LTMTGLGMLITAIY 407
Cdd:PRK12662 376 ITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIgLVVLLVGSGLSVIY 428
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-414 |
3.45e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 55.73 E-value: 3.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 56 SMATDPLSTPLLILTCWLLPLMILASQNHMSMEplnRQRS-FISLLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIII 134
Cdd:PRK07691 72 VFVADMFAALLVLTSSIITFLVILYSFQTIGIE---RERYyYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLI 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 135 TRWGNQTERLNAGTYFLFyTLMGSLPLLIALLMTQNNLGTLSMPLI-QHLHQMKLHTHGDMmwwTACLLAFLV----KMP 209
Cdd:PRK07691 149 VIGGTKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLNMADIsVKIAELSAGQTGLI---TVVAILFLFvfatKAG 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 210 LYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIMMLTPMTKTLAYPFI-ILALWGIIMtGSI-CLRQTDLKSLI 287
Cdd:PRK07691 225 LFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLIlILALLTIIF-GVIgAVAYFDIKKII 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 288 AYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFCLANTNYERTHSRTMILARGMQVILPLM--TFWWLMMNL 365
Cdd:PRK07691 304 IYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLgwMFFIAALSL 383
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 62184406 366 AnlALPPSTNLMGELLIITTTFNWSNWTLTMTGLGMLITAIYS-LHMFLT 414
Cdd:PRK07691 384 A--GIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSvIKIFLK 431
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
149-328 |
3.57e-08 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 55.67 E-value: 3.57e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 149 YFLFYTLMGSLpLLIALLMTQNNLGTLSMPLIQHLhqmklhthGDMMWWTAcLLAFLVKMPLYGVHLWLPKAHVEAPIAG 228
Cdd:PRK12668 148 YLLVHVLGGVL-LLAGILLHYAETGSFAFGAIAGL--------GGTAAWLI-LIGFGVNAAFPPLHAWLPDAYPEATVTG 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 229 SMVLAAVLLKLGGYGMMRLImmltPMTKTLAYPFIILALWGIIMTgsicLRQTDLKSLIAYSSVGHMGLVAAGILTQTPW 308
Cdd:PRK12668 218 SVFLSAFTTKTAVYALARAF----PGTELLIYIGAAMAVYGVFFA----LLENDLRRLLSYHIVSQVGYMVAGIGIGTAL 289
|
170 180
....*....|....*....|
gi 62184406 309 GFTGATVLMIAHGLTSSALF 328
Cdd:PRK12668 290 AINGAVAHAFNHILYKGLLF 309
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
214-328 |
4.22e-07 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 52.13 E-value: 4.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 214 HLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM-MRLIMM-LTPMTKTLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSS 291
Cdd:PRK05777 224 HMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLLVVaFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
90 100 110
....*....|....*....|....*....|....*..
gi 62184406 292 VGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALF 328
Cdd:PRK05777 303 IAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
96-456 |
9.33e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 51.10 E-value: 9.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 96 FISLLISLQTFLIMAfSATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGtyfLFYTLMGSLP---LLIALLMTQNNL 172
Cdd:TIGR01770 105 YILLLFALLGIFLLV-SSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAG---LKYFILGAFSsglLLFGISLIYGFT 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 173 GTLSM-PLIQHLHQMKLHTHGDMMWWTACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGMMRLIMML 251
Cdd:TIGR01770 181 GSLNFeDLLLFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVP-KIAIFAVFLRLFLY 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 252 TPMTKTLA--YPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALF- 328
Cdd:TIGR01770 260 ILFGFSEAwqIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFg 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 329 CLANT-NYERTHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTFNWSNWTLTMTG-LGMLITAI 406
Cdd:TIGR01770 340 VLSLLrSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAvLTSVIGAF 419
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 62184406 407 YSLH----MFLTTQrglttNHIISIEPSHTREHLLMTMHALPMLLLILKPELIW 456
Cdd:TIGR01770 420 YYLRvvkvMYFDKP-----ERRIPSNPQSKAQSLLLSISALFILFLGLFPSLIL 468
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
138-331 |
1.24e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 50.62 E-value: 1.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 138 GNQTERLNAGTYFLFYTLMGSLPLLIALLMTQNNLGTLSM-------PLIQHLHQMKLHTHGDMMwwtacLLAFLVKMPL 210
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMadlaqriAQLPAADRALLEAGAALL-----LVVFLIKAAM 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 211 YGVHLWLPKAHVEA--PIAGsmvLAAVLLKLGGYGMMRLIMMLTPMTKTLAYPFIILALWGI----IMTGSI-CLRQTDL 283
Cdd:PRK12666 227 WPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGglatLAFGAIgVLAAQRL 303
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 62184406 284 KSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFCLA 331
Cdd:PRK12666 304 RRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-328 |
3.04e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 49.92 E-value: 3.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 214 HLWLPKAhVEAPIAGSMVL-AAVLLKLGGYgmmrLIMMLTPMTKTLA---YPFIILALWGIIMTGSICLRQTDLKSLIAY 289
Cdd:PRK12644 223 HFWLPGA-MAAPTPVSAYLhAAAMVKAGIY----LVARLAPGFADVPvwrPTVLVLGLATMLLGGWRALRQHDLKLILAY 297
|
90 100 110
....*....|....*....|....*....|....*....
gi 62184406 290 SSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALF 328
Cdd:PRK12644 298 GTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
263-383 |
8.02e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 48.10 E-value: 8.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 263 IILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFCLANTNYERTHSRT 342
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 62184406 343 MilaRGMQVILPLMTFWWLMMNLANLAL---PPSTNLMGELLII 383
Cdd:PRK06277 350 L---RKLGGLLPVMPVVAFMVLCAKLAIsgvPPFNGFQSKLMLA 390
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
100-328 |
3.75e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 42.71 E-value: 3.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 100 LISLQTFLIMafSATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAG-TYFLFYTLMGSLPLLIALLMTQNNlGTLSMP 178
Cdd:MTH00196 1 MVALGILCLI--SSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGlKYFVLGALSSGLFLFGCALLCGTT-GGLHLS 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 179 LIQHLHQMKLHTHGDMMWWTACLL--AFLVKMPLYGVHLWLPKAHVEAPIAgSMVLAAVLLKLGGYGMMRLIMMLTPMtk 256
Cdd:MTH00196 78 YINLVLNSGQSFSSVSVPIGYLLIivALLFKLSVAPFHMWAPDVYEGAPTK-TTALLAIVPKLGIFSILVSIGLNVNI-- 154
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 62184406 257 tlaypFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALF 328
Cdd:MTH00196 155 -----LLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
60-296 |
5.66e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 42.25 E-value: 5.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 60 DPLSTPLLILTCWLLPLMILASQNHMSMEPlnRQRSFISLLiSLQTFLIMAFSATE-IIMFYIMFEATLIPTLIIITRWG 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDP--HVPRFLCYL-SLFTFLMMVLVTSDnYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 139 NQTERLNAGTYFLFYTLMGSLPLLIALLMTQNNLGTLSM----------PLIQHLHQMKLHTHGDMMWWTACLLAFLV-- 206
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFltfnggsvgsGIMDRGYYGGGAYESPLAPFAIIGILLLIgc 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 207 --KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLImmltPMTKTLAYPFIILALWGII---MTGSICLRQT 281
Cdd:MTH00032 236 igKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQN 311
|
250
....*....|....*
gi 62184406 282 DLKSLIAYSSVGHMG 296
Cdd:MTH00032 312 DLKKVIAYSTCSQLG 326
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
202-328 |
3.60e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.77 E-value: 3.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 202 LAFLVKMPLYGVHL--WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLImMLTPMTKTLAYPFIILALWGI-IMTGSICL 278
Cdd:PRK06459 166 FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMT-ILTQTIPIGYFGLTILAIGAFsILFGALYA 244
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 62184406 279 RQTD-LKSLIAYSSVGHMG--LVAAGIL------TQTPWGFTGATVLM--IAHGLTSSALF 328
Cdd:PRK06459 245 YVSEnVKGLLAFSTIENNGaiLVALGLYmvtkqlITSIEHFSLITVILysFAHSVAKTGLF 305
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
99-455 |
4.55e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 39.18 E-value: 4.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 99 LLISLQTFLIMAFSATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLPLL--IALLMTQNNLGTLS 176
Cdd:MTH00200 9 FILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFggLLNAWTSGQWGISE 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 177 MPliqhlhqmklhthgDMMWWTACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLlKLGGygmmrLIMMLTPMTK 256
Cdd:MTH00200 89 ML--------------GPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQ-KLAP-----FALLIQLAPA 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 257 TLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAAGIltqtPWGFTGATVLMIAHGLTSSALFCLANTNye 336
Cdd:MTH00200 149 LNSNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGL----VYSPNLALLYLLLYVIITLTVFLLLNLL-- 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 337 rtHSRTMILARGMQVILPLMTFWWLMMNLANLALPPSTNLMGELLIITTTFNWSN-WTLTMTGLGMLITAIYSLHMFLTT 415
Cdd:MTH00200 223 --NSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLfIYATILLLGSLLSLFFYLRLSYLT 300
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 62184406 416 QRGLTTNHIISIEPSHTREH---LLMTMHALPMLLLILKPELI 455
Cdd:MTH00200 301 LLTLSPNQINMMSSWRTKSNsnlLVGLLLLLSILGLPLTPQLL 343
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
155-397 |
7.69e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 38.22 E-value: 7.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 155 LMGSLPLLIALLMTQNNLGTLSMPLIQHLHQMKLHTHGDMMWWTAC----------LLAFLVKMPLYGVHLWLPkaHVEA 224
Cdd:MTH00011 39 LLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFPSllknitalmlLVSLMLKLGMAPCHFWFP--SVMS 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 225 PIagSMVLAAVLLKLGGYGMMRLIMMLTPMTKTLAYPFIilALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAagiLT 304
Cdd:MTH00011 117 SI--SWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSM--AAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMT---MI 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 305 QTPWGFTGATVLMIAHGLTSSALFCLANTNYERTHSRTMILARGmqvilPLMTFWWLMMNLANLALPPSTNLMGELLIIT 384
Cdd:MTH00011 190 SVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMS-----QTTSMSLFIMLLSLGGLPPFTGFMPKLMAIE 264
|
250
....*....|...
gi 62184406 385 TTFNWSNWTLTMT 397
Cdd:MTH00011 265 TLTSNSMILILLV 277
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
202-328 |
7.83e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 38.69 E-value: 7.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62184406 202 LAFLVKMPLYGVHLWLPKAHVEAPIAgSMVLAAVLLKLGGYGMMRLIMMLTPMTKTLAYPFIILALWGiimtgsiCLRQT 281
Cdd:MTH00198 307 VAILFKLAAAPFHMWTPDVYEGAPTP-TTALIAIIPKFTVYILLTSLVITSKLLLSVAIISLVVGAFG-------ALNQT 378
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 62184406 282 DLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALF 328
Cdd:MTH00198 379 RIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALASF 425
|
|
| |
