Taxonomy browser (Haloarcula)

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Taxonomy browser (Haloarcula)

Haloarcula

Taxonomy ID: 2237 (for references in articles please use NCBI:txid2237)

current name

Haloarcula Torreblanca et al. 1986 in [Validation List No. 22 (1986), Torreblanca M et al. (1986)]

homotypic synonym:

"Haloarcula" Javor et al. 1982, effective name¹⁾

Haloarcula Torreblanca et al. 1986 emend. Oren et al. 2009, emended name²⁾

Haloarcula Torreblanca et al. 1986 emend. Ma et al. 2024, emended name³⁾ in [Ma X et al. (2024)]

NCBI BLAST name: euryarchaeotes
Rank: genus
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym

Halomicroarcula Echigo et al. 2013

homotypic synonym:

Halomicroarcula Echigo et al. 2013 emend. Zhang and Cui 2014, emended name⁴⁾

Lineage( full ): cellular organisms; Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Haloarculaceae

Entrez records
Database name	Subtree links	Direct links
Nucleotide	6,174	1
Protein	268,680	12,374
Structure	122	-
Genome	22	1
Popset	88	85
GEO Datasets	68	-
PubMed Central	2,006	1,977
Gene	89,819	-
SRA Experiments	101	2
Protein Clusters	4,678	2,390
Identical Protein Groups	155,254	12,374
BioProject	76	1
BioSample	178	4
Assembly	62	-
Taxonomy	445	1

Notes:

1) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
2) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.
3) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.
4) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.

Comments and References:

Validation List No. 22 (1986)

VALIDATION LIST No. 22. Int. J. Syst. Bacteriol. (1986) 36(4):573-576.

Torreblanca M et al. (1986)

Torreblanca, M., Rodriguez-Valera, F., Juez, G., Ventosa, A., Kamekura, M., and Kates, M. "Classification of non-alkaliphilic halobacteria based on numerical taxonomy and polar lipid composition, and description of Haloarcula gen. nov. and Haloferax gen. nov." Syst. Appl. Microbiol. (1986) 8(1-2):89-99.

Ma X et al. (2024), PubMed: abstract

Ma, X., Hu, Y., Li, X.-X., Tan, S., Cheng, M., Hou, J., and Cui, H.-L. "Genome-based taxonomy of genera Haloarcula and Halomicroarcula, and description of six novel species of Haloarcula." Extremophiles (2024) 28(1):10.

Haloarcula (LPSN link)

Halomicroarcula (LPSN link)

Associate Editor IJSB (1986) (Haloarcula)

Associate Editor, IJSB "Validation list No. 22 (footnote e)." Int. J. Syst. Bacteriol. (1986) 36:576. (Note: Javor et al. (1982) proposed the name 'Haloarcula' but it was not validly published.)

Cui HL et al. (2009)

Cui, H.-L., Zhou, P.-J., Oren, A., and Liu, S.-J. "Intraspecific polymorphism of 16S rRNA genes in two halophilic archaeal genera, Haloarcula and Halomicrobium." Extremophiles (2009) 13:31-37.

Echigo A et al. (2013)

Echigo, A., Minegishi, H., Shimane, Y., Kamekura, M., Itoh, T., and Usami, R. "Halomicroarcula pellucida gen. nov., sp. nov., a non-pigmented, transparent-colony-forming, halophilic archaeon isolated from solar salt." Int. J. Syst. Evol. Microbiol. (2013) 63:3556-3562.

Javor B et al. (1982)

Javor, B., Requadt, C., and Stoeckenius, W. "Box-shaped halophilic bacteria." J. Bacteriol. (1982) 151(3):1532-1542.

Oren A et al. (2009)

Oren, A., Arahal, D.R., and Ventosa, A. "Emended descriptions of genera of the family Halobacteriaceae." Int. J. Syst. Evol. Microbiol. (2009) 59:637-642.

Zhang WJ & Cui HL (2014b)

Zhang, W.-J., and Cui, H.-L. "Halomicroarcula limicola sp. nov., isolated from a marine solar saltern, and emended description of the genus Halomicroarcula." Int. J. Syst. Evol. Microbiol. (2014) 64:1747-1751.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Haloarcula	taxonomy/phylogenetic	Encyclopedia of life
Haloarcula	taxonomy/phylogenetic	Lifemap
LBSN	taxonomy/phylogenetic	List of Bacterial names with Standing in Nomenclature
OMA	taxonomy/phylogenetic	OMA Browser: Orthologous MAtrix
Haloarcula (Torreblanca, Rodriquez-Valera, Juez, Ventosa, Kamekura & Kates, 1986) emend. Oren, Arahal & Ventosa, 2009	taxonomy/phylogenetic	Ocean Biogeographic Information System
Haloarcula (Torreblanca, Rodriquez-Valera, Juez, Ventosa, Kamekura & Kates, 1986) emend. Oren, Arahal & Ventosa, 2009	taxonomy/phylogenetic	World Register of Marine Species
Wikipedia	taxonomy/phylogenetic	iPhylo

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

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