Taxonomy browser (Clostridium butyricum)

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Taxonomy browser (Clostridium butyricum)

Clostridium butyricum

Taxonomy ID: 1492 (for references in articles please use NCBI:txid1492)

current name

Clostridium butyricum Prazmowski 1880

type strain of Clostridium butyricum: ATCC :19398, CCUG :4217, CIP:103309, DSM :10702, HAMBI:482, IAM:14194, IFO :13949, JCM :1391, KCTC :1786, KCTC :1871, BCCM/LMG :1217, NBRC :13949, NCCB:89156, NCIMB:7423, NCTC :7423, VKM :B-1773, VPI:3266

homotypic synonym:

"Bacillus butyricus" (Prazmowski 1880) Flugge 1886, effective name¹⁾

NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym

"Bacillus amylobacter" van Tieghem 1877, effective name²⁾

heterotypic synonym

"Bacterium navicula" Reinke and Berthold 1879, effective name³⁾

heterotypic synonym

"Metallacter amylobacter" (van Tieghem 1877) Trevisan 1879, effective name⁴⁾

heterotypic synonym

"Amylobacter navicula" (Reinke and Berthold 1879) Wehmer 1898, effective name⁵⁾

heterotypic synonym

"Bacillus navicula" (Reinke and Berthold 1879) Chester 1898, effective name⁶⁾

heterotypic synonym

"Clostridium naviculum" (Reinke and Berthold 1879) Prevot 1938, effective name⁷⁾

heterotypic synonym

"Clostridium kainantoi" Takeda and Matsui 1955, effective name⁸⁾

heterotypic synonym

"Clostridium pseudotetanicum" (Prevot 1938) Smith and Hobbs 1974, effective name⁹⁾

Lineage( full ): cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium

Entrez records
Database name	Subtree links	Direct links	Links from type
Nucleotide	15,090	13,192	647
Protein	176,383	156,140	-
Structure	10	6	-
Genome	1	1	-
Popset	28	28	-
GEO Datasets	20	20	-
PubMed Central	3,126	3,126	-
Gene	16,755	12,592	-
SRA Experiments	202	195	-
Protein Clusters	3,189	3,189	-
Identical Protein Groups	84,172	82,720	-
BioProject	105	96	-
BioSample	385	374	6
Assembly	155	147	-
PubChem BioAssay	11	11	-
Taxonomy	11	1	-

Notes:

1) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
2) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
3) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
4) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
5) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
6) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
7) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
8) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
9) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).

Comments and References:

image:Clostridium butyricum

Biebl H & Sproer C (2002)

Biebl, H., and Sproer, C. "Taxonomy of the glycerol fermenting clostridia and description of Clostridium diolis sp. nov." Syst. Appl. Microbiol. (2002) 25:491-497.

Cato EP et al. (1986)

Cato, E.P., George, W.L., and Finegold, S.M. "Genus Clostridium Prazmowski 1880, 23AL." In: P.H.A. Sneath, N.S. Mair, M.E. Sharpe, and J.G. Holt (ed.) Bergey's Manual of Systematic Bacteriology, vol. 2, The Williams & Wilkins Co., Baltimore (1986) pp. 1141-1200. [No PubMed record available.]

Chester FD (1898)

Chester, F.D. "Report of the mycologist: Bacteriological work." Delaware Agricultural Experimental Station Annual Report (1898) 10:47-137. [No PubMed record available.]

Flügge C (1886)

Flügge, C. Die Microorganismen. (1886) F.C.W. Vogel, Leipzig. [No PubMed record available.]

Prévot AR (1938b)

Prévot, A.R. "Etudes de systematique bacterienne. IV. Critique de la conception actuelle du genre Clostridium." Ann. Inst. Pasteur (Paris) (1938) 61:72-91. [No PubMed record available.]

Skerman VBD et al. (1980)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

Takeda Y & Matsui T (1955)

Takeda, Y., and Matsui, T. "Mycological studies of acetone-butanol fermenting bacteria (KN-18) (Clostridium kainantoi n. sp.)." Agric. Biol. Chem. (1955) 29:78-82. [No PubMed record available.]

Trevisan V (1879)

Trevisan, V. "Prime linee d'introduzione allo studio dei Batterj italiani." Rend. Reale Ist. Lombardo Sci., Ser. II (1879) 12:133-151. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Clostridium butyricum	meta-databases	BacDive
8 records from this provider	organism-specific	BioCyc
Clostridium butyricum Prazmowski 1880 (Approved Lists 1980)	taxonomy/phylogenetic	Encyclopedia of life
11 records from this provider	organism-specific	Genomes On Line Database
Show Biotic Interactions	taxonomy/phylogenetic	Global Biotic Interactions
Clostridium butyricum	culture/stock collections	Global Catalogue of Microorganisms
25 records from this provider	organism-specific	Integrated Microbial Genomes
4 records from provider	taxonomy/phylogenetic	Systematic Mycology and Microbiology Laboratory, Fungal Databases

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

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