Taxonomy browser (Clostridium sporogenes)

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Taxonomy browser (Clostridium sporogenes)

Clostridium sporogenes

Taxonomy ID: 1509 (for references in articles please use NCBI:txid1509)

current name

Clostridium sporogenes (Metchnikoff 1908) Bergey et al. 1923 (Approved Lists 1980)

type strain of Clostridium sporogenes: ATCC :3584, BCRC :11259, CCUG :15941, CIP:106155, DSM :795, JCM :1416, BCCM/LMG :8421, NCIMB:10696, NCTC :13020

basionym:

"Bacillus sporogenes" Metchnikoff 1908, effective name¹⁾

homotypic synonym:

"Metchnikovillus sporogenes" (sic) Heller 1922, effective name²⁾

"Clostridium sporogenes" (Heller 1922) Bergey et al. 1923, effective name³⁾

"Clostridium sporogenes var. A" (Metchnikoff 1908) Prevot 1938, effective name⁴⁾

NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)

Lineage( full ): cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium

Entrez records
Database name	Subtree links	Direct links	Links from type
Nucleotide	15,411	14,923	223
Protein	172,209	164,377	-
Structure	5	3	-
Genome	1	1	-
Popset	40	40	-
GEO Datasets	23	15	-
PubMed Central	1,482	1,482	-
Gene	11,826	11,826	-
SRA Experiments	228	221	-
Protein Clusters	1,900	1,900	-
Identical Protein Groups	86,460	85,501	-
BioProject	49	46	-
BioSample	249	241	17
Assembly	150	148	-
PubChem BioAssay	16	16	-
Taxonomy	4	1	-

Notes:

1) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
2) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
3) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
4) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).

Comments and References:

Bergey DH et al. (1923)

Bergey, D.H., Harrison, F.C., Breed, R.S., Hammer B.W., and Huntoon, F.M. Bergey's Manual of Determinative Bacteriology, 1st ed. (1923) The Williams and Wilkins Co., Baltimore, pp. 1-442. [No PubMed record available.]

JUDICIAL OPINION 69 (1999)

Judicial Commission of the International Committee on Systematic Bacteriology. "Rejection of Clostridium putrificum and conservation of Clostridium botulinum and Clostridium sporogenes-Opinion 69." Int. J. Syst. Bacteriol. (1999) 49:339.

Judicial Commission (1997)

Judicial Commission of the International Committee on Systematic Bacteriology. "VIIIth International Congress of Microbiology and Applied Bacteriology. Minutes of the meetings, 17 and 22August 1996, Jerusalem, Israel." Int. J. Syst. Bacteriol. (1997) 47:240-241. [No PubMed record available.]

Olsen I et al. (1995)

Olsen, I., Johnson, J.L., Moore, L.V.H., and Moore, W.E.C. "Rejection of Clostridium putrificum and conservation of Clostridium botulinum and Clostridium sporogenes. Request for an opinion." Int. J. Syst. Bacteriol. (1995) 45:414. [No PubMed record available.]

Prévot AR (1938b)

Prévot, A.R. "Etudes de systematique bacterienne. IV. Critique de la conception actuelle du genre Clostridium." Ann. Inst. Pasteur (Paris) (1938) 61:72-91. [No PubMed record available.]

Skerman VBD et al. (1980)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Clostridium sporogenes	meta-databases	BacDive
4 records from this provider	organism-specific	BioCyc
Clostridium sporogenes (Metchnikoff 1908) Bergey et al. 1923 (Approved Lists 1980)	taxonomy/phylogenetic	Encyclopedia of life
GOLD: 12 Organisms	organism-specific	Genomes On Line Database
Show Biotic Interactions	taxonomy/phylogenetic	Global Biotic Interactions
Clostridium sporogenes	culture/stock collections	Global Catalogue of Microorganisms
24 records from this provider	organism-specific	Integrated Microbial Genomes
Clostridium sporogenes \| SeqCode Registry	taxonomy/phylogenetic	SeqCode Registry

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

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