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Taxonomy browser (Cellvibrio japonicus)

Cellvibrio japonicus

Taxonomy ID: 155077 (for references in articles please use NCBI:txid155077)
current name
Cellvibrio japonicus Humphry et al. 2003
type strain of Cellvibrio japonicus: NCDO:2697, NCIMB:10462, DSM:16015, KCTC:1397, personal::Ueda107
homotypic synonym:
"Cellvibrio japonicus" Nurizzo et al. 2002, effective name 1)
includes:
Pseudomonas sp. NCIMB 10462
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
'Cellvibrio cellulosa'
heterotypic synonym
'Pseudomonas fluorescens subsp. cellulosa'
heterotypic synonym
Pseudomonas fluorescens cellulosa
heterotypic synonym
"Pseudomonas fluorescens subsp. cellulosa" (Ueda et al. 1952) NCIMB 10462
heterotypic synonym
"Cellvibrio cellulosa" Nagy et al. 2002, effective name 2)
homotypic synonym:
"Pseudomonas cellulosa" Dees et al. 1995, effective name 3)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Cellvibrionales; Cellvibrionaceae; Cellvibrio
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 42 35 8
Protein 18,646 14,512 -
Structure 88 53 -
Genome 1 1 -
GEO Datasets 97 89 -
PubMed Central 417 417 -
Gene 3,818 1 -
SRA Experiments 81 81 -
Protein Clusters 2,401 2,401 -
Identical Protein Groups 5,125 4,218 -
BioProject 11 9 -
BioSample 70 69 13
Assembly 4 3 -
PubChem BioAssay 2 2 -
Taxonomy 2 1 -

Notes:

Comments and References:

Dees HC (1997)
Dees, H.C. "Cellulase-containing cell-free fermentate produced from microorganism ATCC 55702." U.S. Pat. 5,698,429 (dated Dec. 16, 1997)
Humphry DR et al. (2003)
Humphry, D.R., Black, G.W., and Cummings, S.P. "Reclassification of 'Pseudomonas fluorescens subsp. cellulosa' NCIMB 10462 (Ueda et al. 1952) as Cellvibrio japonicus sp. nov. and revival of Cellvibrio vulgaris sp. nov., nom. rev. and Cellvibrio fulvus sp. nov., nom. rev." Int. J. Syst. Evol. Microbiol. (2003) 53:393-400. Published online 4 October 2002: DOI 10.1099/ijs.0.02271-0
Nagy T et al. (2002)
Nagy, T., Emami, K., Fontes, C.M.G.A., Ferreira, L.M.A., Humphry, D.R., Gilbert, H.J. "The membrane-bound-glucuronidase from Pseudomonas cellulosa hydrolyzes 4-O-methyl-D-glucuronoxylooligosaccharides but not 4-O-methyl-D-glucuronoxylan." J. Bacteriol. (2002) 184:4925-4929.
Nurizzo D et al. (2002)
Nurizzo, D., Turkenburg, J.P., Charnock, S.J., Roberts, S.M., Dodson, E.J., McKie, V.A., Taylor, .E.J, Gilbert, H.J., and Davies, G.J. "Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade beta-propeller fold." Nat. Struct. Biol. (2002) 9:665-668.
Ueda K et al. (1952)
Ueda, K., Ishikawa, S., Itami, T., and Asai, T.: J. Agr. Chem. Soc. Japan (1952) 26:35. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Cellvibrio japonicus meta-databases BacDive
Cellvibrio japonicus Humphry et al. 2003 taxonomy/phylogenetic Encyclopedia of life
Cellvibrio japonicus culture/stock collections Global Catalogue of Microorganisms
3 records from provider organism-specific Integrated Microbial Genomes
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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