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Taxonomy browser (Fructilactobacillus sanfranciscensis)

Fructilactobacillus sanfranciscensis

Taxonomy ID: 1625 (for references in articles please use NCBI:txid1625)
current name
Fructilactobacillus sanfranciscensis (Weiss and Schillinger 1984) Zheng et al. 2020 in [Zheng J et al. (2020)]
basionym:
Lactobacillus sanfranciscensis corrig. (ex Kline and Sugihara 1971) Weiss and Schillinger 1984
type strain of Lactobacillus sanfranciscensis: ATCC:27651, CCUG:30143, CIP:103252, DSM:20451, JCM:5668, BCCM/LMG:16002, NRRL:B-3934, personal::L-12
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Lactobacillus sanfrancisco" Kline and Sugihara 1971, effective name 1)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Fructilactobacillus
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 4,504 4,253 523
Protein 42,427 38,686 -
Structure 1 1 -
Genome 1 1 -
Popset 19 19 -
GEO Datasets 48 48 -
PubMed Central 396 396 -
Gene 5,861 2,837 -
SRA Experiments 53 52 -
Protein Clusters 692 692 -
Identical Protein Groups 15,954 15,349 -
BioProject 15 14 -
BioSample 92 89 4
Assembly 50 47 -
Taxonomy 3 1 -

Notes:

Comments and References:
Zheng J et al. (2020), PubMed: abstract
Zheng, J., Wittouck, S., Salvetti, E., Franz, C.M.A.P., Harris, H.M.B., Mattarelli, P., O'Toole, P.W., Pot, B., Vandamme, P., Walter, J., Watanabe, K., Wuyts, S., Felis, G.E., Gänzle, M.G., and Lebeer, S. "A taxonomic note on the genus description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae." Int. J. Syst. Evol. Microbiol. (2020) 70(4):2782-2858.
Kline L & Sugihara TF (1971)
Kline, L., and Sugihara, T.F. "Microorganisms of the San Francisco sour dough bread process. II. Isolation and characterization of undescribed bacterial species responsible for the souring activity." Appl. Microbiol. (1971) 21:459-465.
Trüper HG & De'clari L (1997) (reference relating to orthographic revision)
Trüper, H.G., and De'clari, L. "Taxonomic note: Necessary correction of specific epithets formed as substantives (nouns) 'in apposition'." Int. J. Syst. Bacteriol. (1997) 47(3):908-909. [No PubMed record available.]
VALIDATION LIST No. 16 (1984)
VALIDATION LIST No. 16. Int. J. Syst. Bacteriol. (1984) 34:503-504.
Weiss N & Schillinger U (1984)
Weiss, N., and Schillinger, U. "Lactobacillus sanfrancisco sp. nov., nom. rev." Syst. Appl. Microbiol. (1984) 5:230-232. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Fructilactobacillus sanfranciscensis meta-databases BacDive
Lactobacillus sanfranciscensis corrig. (ex Kline and Sugihara 1971) Weiss and Schillinger, 1984 taxonomy/phylogenetic Encyclopedia of life
GOLD Multi-Isolate Organism: Go0451702 organism-specific Genomes On Line Database
2 records from this provider culture/stock collections Global Catalogue of Microorganisms
12 records from this provider organism-specific Integrated Microbial Genomes
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

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strain
10BAM [1] 17B2 [1] 2206-YBC-2021 [2 1] 2B4 [6 6 6]
3MLN [6 6 6] 83ML2 [6 6 6] 83MV2 [6 6 6] 8M2A3 [6 6 6]
8P4A1B1 [6 6 6] 8V4A2B2 [6 6 6] ACA-DC 3408 (= R-15333) [1] ACA-DC 3408 = R-15333 [1]
ATCC 27651 [4 4] ATCC 27651 T [1] ATCC 43332 [7 3 4] Ah1 [5 5]
Ah10 [5 5] Ah11 [5 5] Ah12 [5 5] Ah13 [5 5]
Ah14 [5 5] Ah15 [5 5] Ah2 [5 5] Ah3 [5 5]
Ah4 [2 149 1317] Ah5 [5 5] Ah6 [5 5] Ah7 [5 5]
Ah8 [5 5] Ah9 [5 5] B2001 [6 6 6] B415 [1]
B48 [6 6 6] B92 [6 6 6] BAT0408 [6 6 6] BB1 [1]
BB23 [1] BB28 [1] BC1 [1] BC9 [1]
BL1023 [1 1] BL631 [1 1] BL843 [1 1] BL848 [1 1]
BL970 [1 1] BS1-13 [1] Bj1 [5 5] Bj13 [5 5]
Bj2 [5 5] Bj5 [5 5] Bj9 [5 5] C57 (= R-15351) [1]
C57 = R-15351 [1] CB1 [6 6 8] CIP 103252 [3] D15 [6 6 6]
DA13 [1] DA2 [1] DA4 [1] DA6 [1]
DB2 [1] DB6 [1] DC5 [1] DC7 [1]
DISSPA100 [1 1] DISSPA98 [1 1] DSM 20451 [1 189 9 1284] DSM 20663 [7 6 6]
DSM20451 [4 3] E20 [6 6 6] EA1 [1] EA15 [1]
ED11 [1 1] ED13 [1 1] ED14 [1 1] ED2 [1 1]
ED3 [1 1] ED4 [1 1] ED5 [1] ED6 [1 1]
ED7 [1 1] ED8 [1 1] ED9 [1 1] EN5 [1]
FA13 [1] FA2 [1] FA22 [1] FA26 [1]
FA30 [1] FA4 [1] FB4 [1] FB5 [1]
Fs_1001 [1 55 1] Fs_1002 [1 52 1] Fs_1003 [1 69 1] Fs_1004 [1 62 1]
Fs_1005 [1 63 1] Fs_1006 [1 62 1] Fs_1007 [1 61 1] Fs_1008 [1 66 1]
Fs_1009 [1 62 1] Fs_1010 [1 73 1] Fs_1011 [1 58 1] Fs_1012 [1 59 1]
Fs_1013 [1 61 1] Fs_1014 [1 58 1] Gm1 [5 5] Gm10 [5 5]
Gm12 [5 5] Gm14 [5 5] Gm3 [5 5] Gm4 [5 5]
Gm6 [5 5] Gm8 [5 5] Gs1 [5 5] Gs10 [5 5]
Gs11 [5 5] Gs12 [5 5] Gs13 [5 5] Gs14 [5 5]
Gs15 [5 5] Gs2 [1 111 1322] Gs3 [5 5] Gs4 [5 5]
Gs5 [5 5] Gs7 [5 5] Gs8 [5 5] Gs9 [1 131 1309]
H2A [6 6 6] HA1 [1] HA18 [1] HA3 [1]
HBUR51020 [1] HC23 [1] Hb1 [5 5] Hb2 [5 5]
Hr8 [5 5] I2 [6 6 6] IC11 [1] IMA 13LAB [1]
IMA 19LAB [1] IMA 23LAB [1] IMA 29LAB [1] IMA 2LAB [1]
IMA 3LAB [1] IMA 44LAB [1] IMA 64LAB [1] IMA 67LAB [1]
IMA 93LAB [1] IMA 97LAB [1] IMAUV3003 [1 1] IMAUV3004 [1 1]
IMAUV3007 [1 1] IMAUV3008 [1 1] JCM 11032 [1] JCM 12424 [1]
JCM 12425 [1] JCM 12426 [1] JCM 12427 [1] JCM 12428 [1]
JCM 12429 [1] JCM 12430 [1] JCM 12431 [1] JCM 12432 [1]
JCM 12433 [1] JCM 12434 [1] JCM 12435 [1] JCM 12436 [1]
JCM 12437 [1] JCM 12438 [1] JCM 12439 [1] JCM 12440 [1]
JCM 12441 [1] JCM 12442 [1] JCM 12443 [1] JCM 12444 [1]
JCM 5668 [1 2 215 2548] JCM 9502 [1] JCM_5668 [1 2 215 2548] Jcm5668 [1]
LBH1068 [1 1] LC6 [1] LMG 16002 [3 1] LS1 [1 1]
LS10 [1 1] LS11 [1 1] LS12 [1 1] LS13 [1 1]
LS14 [1 1] LS15 [1 1] LS16 [1 1] LS17 [1 1]
LS18 [1 1] LS19 [1 1] LS2 [1 1] LS20 [1 1]
LS21 [1 1] LS22 [1 1] LS23 [1 1] LS24 [1 1]
LS25 [1 1] LS26 [1 1] LS27 [1 1] LS28 [1 1]
LS29 [1 1] LS3 [1 1] LS30 [1 1] LS31 [1 1]
LS32 [1 1] LS33 [1 1] LS34 [1 1] LS35 [1 1]
LS36 [1 1] LS37 [1 1] LS38 [1 1] LS39 [1 1]
LS4 [1 1] LS40 [1 1] LS41 [1 1] LS42 [1 1]
LS43 [1 1] LS44 [1 1] LS45 [1 1] LS451 [1 2 1206]
LS46 [1 1] LS47 [1 1] LS48 [1 1] LS49 [1 1]
LS5 [1 1] LS50 [1 1] LS6 [1 1] LS7 [1 1]
LS8 [1 1] LS9 [1 1] LSHS1-3 [1 1] LSHS2-4 [1 1]
La10 [1] La14 [1] La15 [1] La2 [7 1]
La4 [1] La5 [1] La6 [1] Ls-1001 [1 69]
MBA1 [6 6 6] MDC [6 6 6] MG1 [6 6 6] MT0T [6 6 6]
NCC2505 [1 1] NCC2512 [1 1] NCC2532 [1 1] NCC2550 [1 1]
NCC2558 [1 1] NCC2572 [1 1] NCC2580 [1 1] NCC2602 [1 1]
NCC2607 [1 1] NCC2615 [1 1] NCC2629 [1 1] NCC2673 [1 1]
NCC2678 [1 1] NCC2681 [1 1] NCC2694 [1 1] NCC2731 [1 1]
NCC2764 [1 1] NCC2769 [1 1] NCC463 [1 1] NE1 [1]
OA22 [1] PA15 [1] PA16 [1] PA22 [1]
PB 213 [6 6 6] PB24 [1] PC23 [1] PC27 [1]
PC28 [1] PC30 [1] PON100100 [1 1] PON100118 [1 1]
PON100336 [1 1] PON100419 [1 1] PON10075 [1 1] QB4 [1]
QB9 [1] QC6 [1] R-30113 [1 1] R-30134 [1 1]
R-30135 [1 1] R-30139 [1 1] R-30149 [1 1] R-30160 [1 1]
R-30192 [1 1] R-32935 [1 1] R-32936 [1 1] R-32938 [1 1]
R-32939 [1 1] R-32940 [1 1] R-33875 [1 1] R-33876 [1 1]
R-33877 [1 1] R-33886 [1 1] R-33895 [1 1] R-34310 [1 1]
R-34311 [1 1] R-34312 [1 1] R-34313 [1 1] R-34314 [1 1]
R-34315 [1 1] R-34316 [1 1] R-34318 [1 1] RL658 [1 1]
RL750 [1 1] RL976 [1 1] RL986 [1 1] RL989 [1 1]
S1 [1 1 1] S133 [6 6 6] SD01_101 [4 3 4] SD01_103 [4 3 4]
SD01_105 [4 3 4] SD01_111 [4 3 4] SD01_113 [4 3 4] SD02_103 [4 3 4]
SD02_105 [4 3 4] SD02_107 [4 3 4] SD02_111 [4 3 4] SD02_205 [4 3 4]
SD03_202 [4 3 4] SD03_205 [4 3 4] SD03_304 [4 3 4] SD03_310 [4 3 4]
SD03_404 [4 3 4] SD04_101 [4 3 4] SD04_102 [4 3 4] SD04_106 [4 3 4]
SD04_204 [4 3 4] SD04_315 [4 3 4] SD05_102 [4 3 4] SD05_104 [4 3 4]
SD05_209 [4 3 4] SD06_102 [4 3 4] SD06_105 [4 3 4] SD06_202 [4 3 4]
SD07_101 [4 3 4] SD07_102 [4 3 4] SD07_202 [4 3 4] SD07_205 [4 3 4]
SD07_212 [4 3 4] SD08_201 [4 3 4] SD08_302 [4 3 4] SD08_312 [4 3 4]
SD08_334 [4 3 4] SD10_106 [4 3 4] SD10_109 [4 3 4] SD10_113 [4 3 4]
SD10_213 [4 3 4] SD11_103 [4 3 4] SD11_104 [4 3 4] SD11_105 [4 3 4]
SD11_204 [4 3 4] SD11_303 [4 3 4] SD12_107 [4 3 4] SD12_203 [4 3 4]
SD12_215 [4 3 4] SD12_304 [4 3 4] SD12_406 [4 3 4] SD13_101 [4 3 4]
SD13_201 [4 3 4] SD13_204 [4 3 4] SD13_301 [4 3 4] SD13_312 [4 3 4]
SD14_101 [4 3 4] SD14_116 [4 3 4] SD14_127 [4 3 4] SD22 [1]
SPC-SNU-70-4 [1 1 4 1292] Sd1-3 [1 104 1273] Sx1 [5 5] Sx10 [5 5]
Sx11 [5 5] Sx13 [5 5] Sx14 [5 5] Sx2 [5 5]
Sx3 [5 5] Sx4 [5 5] Sx5 [5 5] Sx6 [5 5]
TA22 [1] TC25 [1] TMW 1.1150 [1 52 1195] TMW 1.1304 [1 1 12 1288]
TMW 1.1597 [1 60 1232] TMW 1.2137 [1 52 1210] TMW 1.2138 [1 68 1190] TMW 1.2139 [1 72 1256]
TMW 1.2140 [1 90 1201] TMW 1.2141 [1 58 1241] TMW 1.2142 [1 56 1212] TMW 1.2323 [2 17]
TMW 1.392 [1 92 1187] TMW 1.53 [1 101 1224] TMW 1.54 [1 106 1225] TMW 1.726 [1 64 1184]
TMW11152 [1 35] TMW11154 [1 42] TMW11221 [1 61] TMW11304 [1 46]
TMW11470 [1 20] TMW11730 [1 46] TMW12134 [1 40] TMW1640 [1 43]
TMW1897 [1 52] TMW1907 [1 52] TMW1936 [1 34] Ts1 [5 5]
Ts11 [5 5] Ts12 [5 5] Ts14 [5 5] Ts15 [5 5]
Ts2 [5 5] Ts3 [5 5] Ts4 [5 5] Ts6 [5 5]
Ts8 [5 5] Ts9 [1 143 1288] UA21 [1] UA3 [1]
UB17 [1] UC15 [1] UMCC 2989 [1] UMCC 2990 [1]
UMCC 2991 [1] UMCC 2998 [1] UMCC 2999 [1] UTMB10 [1]
UTMB11 [1] UTMB13 [1] UTMB14 [1] UTMB15 [1]
UTMB16 [1] UTMB21 [1] UTMB22 [1] UTMB23 [1]
UTMB25 [1] Wf1 [5 5] Wf10 [5 5] Wf11 [5 5]
Wf12 [5 5] Wf13 [5 5] Wf14 [5 5] Wf15 [5 5]
Wf2 [5 5] Wf3 [5 5] Wf4 [5 5] Wf5 [5 5]
Wf6 [5 5] Wf7 [5 5] Wf8 [5 5] Wf9 [5 5]
X17 [1] Xj14 [5 5] Xj15 [5 5] Xj3 [5 5]
Xj7 [5 5] Xj9 [5 5] Zj10 [5 5] Zj11 [5 5]
Zj12 [5 5] Zj13 [5 5] Zj14 [5 5] Zj15 [5 5]
Zj2 [5 5] Zj3 [5 5] Zj4 [5 5] Zj6 [5 5]
Zj7 [5 5] Zj9 [5 5] type strain: LMG 16002 [2 2] type strain:DSM 20451 [1 1]
isolate
14LAB_DGGE [1] 29LAB_DGGE [1] 5LAB_DGGE [1] Otu569 [1]
R-28077 [1 1] R-28078 [1 1] R-29819 [1 1] R-29820 [1 1]
R-29824 [1 1] R-29827 [1 1] R-29829 [1 1] R-29834 [1 1]
R-29838 [1 1] R-29851 [1 1] R-29858 [1 1] R-29953 [1 1]
R-30307 [1 1]
specimen-voucher
Bacteria [1]
culture-collection
ATCC:43332 [4 3 4] DSM:20451 [2 240 3 2456 1] IMAU:10198 [1 1] IMAU:10203 [1 1]
IMAU:V3003 [1 1] IMAU:V3004 [1 1] IMAU:V3007 [1 1] IMAU:V3008 [1 1]
JCM:12424 [1] JCM:12425 [1] JCM:12426 [1] JCM:12427 [1]
JCM:12428 [1] JCM:12429 [1] JCM:12430 [1] JCM:12431 [1]
JCM:12432 [1] JCM:12433 [1] JCM:12434 [1] JCM:12435 [1]
JCM:12436 [1] JCM:12437 [1] JCM:12438 [1] JCM:12439 [1]
JCM:12440 [1] JCM:12441 [1] JCM:12442 [1] JCM:12443 [1]
JCM:12444 [1] JCM:5668 [2 212 2548]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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