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Taxonomy browser (Streptococcus pneumoniae TIGR4)

Streptococcus pneumoniae TIGR4

Taxonomy ID: 170187 (for references in articles please use NCBI:txid170187)
current name
Streptococcus pneumoniae TIGR4
NCBI BLAST name: firmicutes
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Streptococcus pneumoniae ATCC BAA-334
Lineage( full )
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae
   Entrez records   
Database name Direct links
Nucleotide 596
Protein 7,664
Structure 267
Genome 1
Popset 5
GEO Datasets 386
PubMed Central 40
Gene 2,313
SRA Experiments 3,010
Identical Protein Groups 2,789
BioProject 41
BioSample 2,893
Assembly 6
PubChem BioAssay 92
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Tettelin H et al. (2001)
Tettelin, H., Nelson, K.E., Paulsen, I.T., Eisen, J.A., Read, T.D., Peterson, S., Heidelberg, J., DeBoy, R.T., Haft, D.H., Dodson, R.J., Durkin, A.S., Gwinn, M., Kolonay, J.F., Nelson, W.C., Peterson, J.D., Umayam, L.A., White, O., Salzberg, S.L., Lewis,M.R., Radune, D., Holtzapple, E., Khouri, H., Wolf, A.M., Utterback, T.R., Hansen, C.L., McDonald, L.A., Feldblyum, T.V., Angiuoli, S., Dickinson, T., Hickey, E.K., Holt, I.E., Loftus, B.J., Yang, F., Smith, H.O., Venter, J.C., Dougherty, B.A., Morrison,D.A., Hollingshead, S.K., and Fraser, C.M. "Complete genome sequence of a virulent isolate of Streptococcus pneumoniae." Science (2001) 293:498-506.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Streptococcus pneumoniae TIGR4; ATCC BAA-334 organism-specific BioCyc
dryaddb supplemental materials Dryad Digital Repository
GOLD: Go0000727 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
4 records from this provider organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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