Taxonomy browser (Kitasatospora aureofaciens)

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Taxonomy browser (Kitasatospora aureofaciens)

Kitasatospora aureofaciens

Taxonomy ID: 1894 (for references in articles please use NCBI:txid1894)

current name

Kitasatospora aureofaciens (Duggar 1948) Labeda et al. 2017 in [Validation List No. 176 (2017)]

basionym:

Streptomyces aureofaciens Duggar 1948 (Approved Lists 1980) in [Skerman VBD et al. (1980)]

type strain of Streptomyces aureofaciens: ATCC :10762, ATCC :23884, CBS :434.51, CBS :664.68, BCRC :11610, CECT:3206, CIP:57.11, DSM :40127, HAMBI:313, HAMBI:1072, HUT:6048, HUT:6097, ICMP :499, IFM:1042, IFM:1218, IFM:1219, IFO :12594, NBRC :12594, IFO :12843, NBRC :12843, IFO :3712, NBRC :3712, JCM :4624, JCM :4008, BCCM/LMG :5968, NCAIM B.01479, NCIMB:8234, NRRL :2209, NRRL :B-5404, NRRL :ISP-5127, RIA:1129, RIA:57, VKM:Ac:771, ISP:5127, KACC:20180, NRRL :B-2183, NRRL :B-2657
not considered type of Streptomyces aureofaciens: CCM:3239, IMET:43577

homotypic synonym:

Streptomyces aureofaciens Duggar 1948 emend. Groth et al. 2003, emended name

includes:

Streptomyces aureofaciens subsp. aureofaciens

equivalent:

Streptomyces aureifaciens

NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym

Streptomyces avellaneus Baldacci and Grein 1966 (Approved Lists 1980) Baldacci and Grein 1966 in [Skerman VBD et al. (1980)]

type strain of Streptomyces avellaneus Baldacci and Grein 1966 (Approved Lists 1980): CGMCC :4.1687, ATCC :23730, CBS :752.72, BCRC :12219, IMI :126840, DSM :40554, IFO :13451, NBRC :13451, JCM :4725, JCM :4321, NCIMB:11000, NRRL :B-3447, NRRL-ISP:5554, RIA:1412, VKM:Ac:1720, ISP:5554

heterotypic synonym

Kitasatospora psammotica (Virgilio and Hengeller 1960) Labeda et al. 2017 in [Validation List No. 176 (2017)]

basionym:

Streptomyces psammoticus Virgilio and Hengeller 1960 (Approved Lists 1980), nom. approb.¹⁾ in [Skerman VBD et al. (1980)]

type strain of Streptomyces psammoticus: CGMCC :4.1465, ATCC :14125, ATCC :25488, CBS :175.61, CBS :299.65, CBS :916.69, BCRC :12241, DSM :40341, IFO :13877, NBRC :13877, IFO :13971, NBRC :13971, JCM :4434, NRRL :B-3291, NRRL :B-5753, NRRL :ISP-5341, PCM:2371, RIA:1268, RIA:832, VKM:Ac:996, ISP:5341

Lineage( full ): cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Kitasatosporales; Streptomycetaceae; Kitasatospora

Entrez records
Database name	Direct links	Links from type
Nucleotide	7,494	2,952
Protein	101,130	-
Structure	46	-
Genome	1	-
Popset	31	-
GEO Datasets	2	-
PubMed Central	82	-
Gene	7,225	-
SRA Experiments	19	-
Protein Clusters	95	-
Identical Protein Groups	85,462	-
BioProject	16	-
BioSample	87	10
Assembly	31	-
Taxonomy	1	-

Notes:

1) 'Nom. approb.' (= nomen approbatum, = approved name) refers to a name which is included in the Approved Lists of Bacterial Names.

Comments and References:

Validation List No. 176 (2017), PubMed: abstract

Validation List No. 176: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2017) 67(7):2075-2078.

Skerman VBD et al. (1980)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.

Shirling EB & Gottlieb D (1968b)

Shirling, E.B., and Gottlieb, D. "Cooperative description of type cultures of Streptomyces. III. Additional species descriptions from first and second studies." Int. J. Syst. Bacteriol. (1968) 18:279-392. [No PubMed record available.]

Nouioui I et al. (2018c)

Nouioui, I., Carro, L., GarcIa-Lopez, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Goker, M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.

Young JM et al. (1996) (reference with type strain information)

Young, J.M., Saddler, G.S., Takikawa, Y., De Boer, S.H., Vauterin, L., Gardan, L., Gvozdyak, R.I., and Stead, D.E. "Names of plant pathogenic bacteria 1864-1995." Rev. Plant Pathol. (1996) 75:721-763. [No PubMed record available.]

Groth I et al. (2003)

Groth, I., Schutze, B., Boettcher, T., Pullen, C.B., Rodriguez, C., Leistner, E., and Goodfellow, M. "Kitasatospora putterlickiae sp. nov., isolated from rhizosphere soil, transfer of Streptomyces kifunensis to the genus Kitasatospora as Kitasatospora kifunensis comb. nov., and emended description of Streptomyces aureofaciens Duggar 1948." Int. J. Syst. Evol. Microbiol. (2003) 53:2033-2040.

Klaysubun C et al. (2022), doi:10.1099/ijsem.0.005356

Klaysubun, C., Srisuk, N., and Duangmal, K. "Kitasatospora humi sp. nov., isolated from a tropical peat swamp forest soil, and proposal for the reclassification of Kitasatospora psammotica as a later heterotypic synonym of Kitasatospora aureofaciens." Int. J. Syst. Evol. Microbiol. (2022) 72(5):005356.

Shirling EB & Gottlieb D (1972)

Shirling, E.B., and Gottlieb, D. "Cooperative description of type strains of Streptomyces. V. Additional descriptions." Int. J. Syst. Bacteriol. (1972) 22(4):265-394. [No PubMed record available.]

Duggar BM (1948)

Duggar, B.M. "Aureomycin: a product of the continuing search for new antibiotics." Ann. N. Y. Acad. Sci. (1948) 51:177-181. [No PubMed record available.]

Labeda DP et al. (2017)

Labeda, D.P., Dunlap, C.A., Rong, X., Huang, .Y, Doroghazi, J.R., Ju, K.S., and Metcalf, W.W. "Phylogenetic relationships in the family Streptomycetaceae using multi-locus sequence analysis." Antonie van Leeuwenhoek (2017) 110(4):563-583.

Shirling EB & Gottlieb D (1969)

Shirling, E.B., and Gottlieb, D. "Cooperative description of type cultures of Streptomyces. IV. Species descriptions from the second, third and fourth studies." Int. J. Syst. Bacteriol. (1969) 19:391-512. [No PubMed record available.]

Baldacci E & Grein A (1966)

Baldacci, E., and Grein, A. "Streptomyces avellaneus and Streptomyces libani: two new species characterized by a hazel-nut brown (avellaneus) aerial mycelium." Giorn. Microbiol. (1966) 14:185-198. [No PubMed record available.]

Virgilio A & Hengeller C (1960)

Virgilio, A., and Hengeller, C. Farmaco, Edizione Scientifica (1960) 15:164-174. [No PubMed record available.]

Gradnigo JS et al. (2016)

Gradnigo, J.S., Somerville, G.A., Huether, M.J., Kemmy, R.J., Johnson, C.M., Oliver, M.G., and Moriyama, E.N. "Genome sequence of Streptomyces aureofaciens ATCC strain 10762." Genome Announc. (2016) 4:e00615-16.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Kitasatospora aureofaciens	meta-databases	BacDive
4 records from this provider	organism-specific	BioCyc
Streptomyces aureofaciens Duggar 1948 (Approved Lists 1980)	taxonomy/phylogenetic	Encyclopedia of life
GOLD: 3 Organisms	organism-specific	Genomes On Line Database
Show Biotic Interactions	taxonomy/phylogenetic	Global Biotic Interactions
Streptomyces aureofaciens	culture/stock collections	Global Catalogue of Microorganisms
8 records from this provider	organism-specific	Integrated Microbial Genomes
OMA	taxonomy/phylogenetic	OMA Browser: Orthologous MAtrix
Kitasatospora aureofaciens \| SeqCode Registry	taxonomy/phylogenetic	SeqCode Registry
Streptomyces aureofaciens	taxonomy/phylogenetic	Systematic Mycology and Microbiology Laboratory, Fungal Databases

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov