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Taxonomy browser (Gemmobacter)

Gemmobacter

Taxonomy ID: 204456 (for references in articles please use NCBI:txid204456)
current name
Gemmobacter Rothe et al. 1988
homotypic synonym:
Gemmobacter Rothe et al. 1988 emend. Chen et al. 2013, emended name
Gemmobacter Rothe et al. 1988 emend. Kang et al. 2017, emended name
NCBI BLAST name: a-proteobacteria
Rank: genus
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Catellibacterium Tanaka et al. 2004
homotypic synonym:
Catellibacterium Tanaka et al. 2004 emend. Liu et al. 2010, emended name
Catellibacterium Tanaka et al. 2004 emend. Zheng et al. 2011, emended name
Catellibacterium Tanaka et al. 2004 emend. Zhang et al. 2012, emended name
homotypic synonym:
Wagnerdoeblera Hördt et al. 2020, nom. illeg. 1) in [Validation List No. 194 (2020), Hördt A et al. (2020)]
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae
   Entrez records   
Database name Subtree links Direct links
Nucleotide 2,525 -
Protein 138,865 2,250
Genome 16 1
Popset 34 34
PubMed Central 151 151
SRA Experiments 22 14
Identical Protein Groups 114,222 2,250
BioProject 31 2
BioSample 76 15
Assembly 55 -
Taxonomy 39 1

Notes:

Comments and References:
Validation List No. 194 (2020), PubMed: abstract
Validation List No. 194: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2020) 70(7):4043-4049.
Hördt A et al. (2020), doi: 10.3389/fmicb.2020.00468, PubMed: abstract
Hördt, A., López, M.G., Meier-Kolthoff, J.P., Schleuning, M., Weinhold, L.-M., Tindall, B.J., Gronow, S., Kyrpides, N.C., Woyke, T., and Göker, M. "Analysis of 1,000+ type-strain genomes substantially improves taxonomic classification of Alphaproteobacteria." Front. Microbiol. (2020) 11:468.
Gemmobacter (LPSN link)
Catellibacterium (LPSN link)
Chen WM et al. (2013c)
Chen, W.-M., Cho, N.-T., Huang, W.-C., Young, C.-C., and Sheu, S.-Y. "Description of Gemmobacter fontiphilus sp. nov., isolated from a freshwater spring, reclassification of Catellibacterium nectariphilum as Gemmobacter nectariphilus comb. nov., Catellibacterium changlense as Gemmobacter changlensis comb. nov., Catellibacterium aquatile as Gemmobacter aquaticus nom. nov., Catellibacterium caeni as Gemmobacter caeni comb. nov., Catellibacterium nanjingense as Gemmobacter nanjingensis comb. nov., and emended description of the genus Gemmobacter and of Gemmobacter aquatilis." Int. J. Syst. Evol. Microbiol. (2013) 63:470-478.
Kang JY et al. (2017b)
Kang, J.Y., Kim, M.-J., Chun, J., Son, K.P., and Jahng, K.Y. "Gemmobacter straminiformis sp. nov., isolated from an artificial fountain." Int. J. Syst. Evol. Microbiol. (2017) 67:5019-5025.
Liu Y et al. (2010c)
Liu, Y., Xu, C.-J., Jiang, J.-T., Liu, Y.-H., Song, X.-F., Li, H. and Liu, Z.-P. "Catellibacterium aquatile sp. nov., isolated from fresh water, and emended description of the genus Catellibacterium Tanaka et al. 2004." Int. J. Syst. Evol. Microbiol. (2010) 60:2027-2031.
Rothe B et al. (1987)
Rothe, B., Fischer, A., Hirsch, P., Sittig, M., and Stackebrandt, E. "The phylogenetic position of the budding bacteria Blastobacter aggregatus and Gemmobacter aquatilis gen. nov., sp. nov." Arch. Microbiol. (1987) 147:92-99. [No PubMed record available.]
Tanaka Y et al. (2004)
Tanaka, Y., Hanada, S., Manome, A., Tsuchida, T., Kurane, R., Nakamura, K., and Kamagata, Y. "Catellibacterium nectariphilum gen. nov., sp. nov., which requires a diffusible compound from a strain related to the genus Sphingomonas for vigorous growth." Int. J. Syst. Evol. Microbiol. (2004) 54:955-959.
VALIDATION LIST No. 26 (1988)
VALIDATION LIST No. 26. Int. J. Syst. Bacteriol. (1988) 38:328-329.
Zhang J et al. (2012)
Zhang, J., Chen, S.-A., Zheng, J.-W., Cai, S., Hang, B.-J., He, J., and Li, S.-P. "Catellibacterium nanjingense sp. nov., a propanil-degrading bacterium isolated from activated sludge, and emended description of the genus Catellibacterium." Int. J. Syst. Evol. Microbiol. (2012) 62:495-499.
Zheng JW et al. (2011)
Zheng, J.-W., Chen, Y.-G., Zhang, J., Ni, Y.-Y., Li, W.-J., He, J., and Li, S.-P. "Description of Catellibacterium caeni sp. nov., reclassification of Rhodobacter changlensis Anil Kumar et al. 2007 as Catellibacterium changlense comb. nov. and emended description of the genus Catellibacterium." Int. J. Syst. Evol. Microbiol. (2011) 61:1921-1926.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Gemmobacter taxonomy/phylogenetic Lifemap
Catellibacterium Tanaka, Hanada, Manome, Tsuchida, Kurane, Nakamura & Kamagata, 2004 taxonomy/phylogenetic Ocean Biogeographic Information System
Catellibacterium Tanaka, Hanada, Manome, Tsuchida, Kurane, Nakamura & Kamagata, 2004 taxonomy/phylogenetic World Register of Marine Species
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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