Link to NCBI Front Page Taxonomy Logo
Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
Taxonomy browser (Dehalococcoidia)

Dehalococcoidia

Taxonomy ID: 301297 (for references in articles please use NCBI:txid301297)
current name
Dehalococcoidia Loffler et al. 2013
NCBI BLAST name: GNS bacteria
Rank: class
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Dehalococcoidetes" Hugenholtz and Stackebrandt 2004, effective name 1)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Chloroflexota
   Entrez records   
Database name Subtree links Direct links
Nucleotide 50,043 -
Protein 205,436 -
Structure 8 -
Genome 95 -
Popset 78 63
Conserved Domains 9 8
GEO Datasets 251 -
PubMed Central 1,200 361
Gene 18,657 -
SRA Experiments 386 6
Protein Clusters 1,772 -
Identical Protein Groups 1,280,973 -
BioProject 434 1
BioSample 3,138 7
Assembly 2,002 -
Taxonomy 378 1

Notes:

Comments and References:

Hugenholtz P & Stackebrandt E (2004)
Hugenholtz, P., and Stackebrandt, E. "Reclassification of Sphaerobacter thermophilus from the subclass Sphaerobacteridae in the phylum Actinobacteria to the class Thermomicrobia (emended description) in the phylum Chloroflexi (emended description)." Int. J. Syst. Evol. Microbiol. (2004) 54:2049-2051.
Loffler FE et al. (2013)
Loffler, F.E., Yan, J., Ritalahti, K.M., Adrian, L., Edwards, E.A., Konstantinidis, K.T., Muller, J.A., Fullerton, H., Zinder, S.H., and Spormann, A.M. "Dehalococcoides mccartyi gen. nov., sp. nov., obligate organohalide-respiring anaerobic bacteria relevant to halogen cycling and bioremediation, belong to a novel bacterial class, Dehalococcoidia classis nov., order Dehalococcoidales ord. nov. and family Dehalococcoidaceae fam. nov., within the phylum Chloroflexi." Int. J. Syst. Evol. Microbiol. (2013) 63:625-635. [Erratum: Int. J. Syst. Evol. Microbiol. (2015) 65:2015.]
Ravinesan DA & Gupta RS (2014)
Ravinesan, D.A., and Gupta, R.S. "Molecular signatures for members of the genus Dehalococcoides and the class Dehalococcoidia." Int. J. Syst. Evol. Microbiol. (2014) 64:2176-2181.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
13 records from this provider organism-specific Integrated Microbial Genomes
Dehalococcoidia taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Dehalococcoidetes taxonomy/phylogenetic Ocean Biogeographic Information System
Dehalococcoidetes taxonomy/phylogenetic World Register of Marine Species
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


Comments and questions to info@ncbi.nlm.nih.gov

[Help] [Search] [NLM NIH] [Disclaimer]