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Taxonomy browser (Medicago truncatula)

Medicago truncatula

Taxonomy ID: 3880 (for references in articles please use NCBI:txid3880)
current name
Medicago truncatula Gaertn., 1790
Genbank common name: barrel medic
NCBI BLAST name: eudicots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
   Entrez records   
Database name Subtree links Direct links
Nucleotide 536,009 535,213
Protein 163,655 162,958
Structure 86 86
Genome 1 1
Popset 206 205
GEO Datasets 2,981 2,981
PubMed Central 11,626 11,626
Gene 85,010 85,010
SRA Experiments 6,667 6,554
Protein Clusters 14,155 14,155
Identical Protein Groups 101,522 101,270
BioProject 469 464
BioSample 6,460 6,414
Assembly 9 9
PubChem BioAssay 2 2
Taxonomy 4 1

Comments and References:

image:Medicago truncatula
GRIN (Apr 24, 2014)
Name accessed on 24 April 2014 in: USDA, ARS, National Genetic Resources Program. Germplasm Resources Information Network - (GRIN) [Online Database]. National Germplasm Resources Laboratory, Beltsville, Maryland.
Euro+Med Plantbase
Name verified on date of entry into database in: The Euro+Med Plantbase - the information resource for Euro-Mediterranean plant diversity. W. Greuter (Ed.) Botanic Garden and Botanical Museum Berlin-Dahlem.
African Plant Database (Apr 24, 2014)
Name accessed on 24 April 2014 in: African Flowering Plants Database (version 3.1). Conservatoire et Jardin botaniques de la Villle de Geneve and South African National Biodiversity Institute, Pretoria, retrieved from http://www.ville-ge.ch/musinfo/bd/cjb/africa
LegumeWeb (Apr 28, 2014)
Name accessed on 28 April 2014 in: International Legume Database & Information Service (ILDIS), World Database of Legumes, version 10.0

Genome Information

Go to NCBI genomic BLAST page for Medicago truncatula
Genome view: 9 chromosomes
Names 1 2 3 4 5 6 7 8 Pltd

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
GOLD: 14 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Medicago truncatula Gaertner (incl. var. longeaculeata Urban) taxonomy/phylogenetic Integrated Taxonomic Information System
Medicago truncatula Data Base taxonomy/phylogenetic NCBI taxonomy bookmarks
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Medicago truncatula (Gaertn.) herbarium/museum collections PlantaeDB, University of Bucharest
Medicago truncatula taxonomy/phylogenetic Plants of the World Online
Medicago truncatula taxonomy/phylogenetic The International Plant Names Index
Medicago truncatula taxonomy/phylogenetic TreeBase
Medicago truncatula Gaertn. taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
WebScipio: Medicago truncatula organism-specific WebScipio - eukaryotic gene identification
25 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Show organism modifiers


Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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