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Taxonomy browser (Cryptococcus neoformans var. neoformans)

Cryptococcus neoformans var. neoformans 1)

Taxonomy ID: 40410 (for references in articles please use NCBI:txid40410)
current name
Cryptococcus neoformans var. neoformans (San Felice) Vuill. 1901
type material of Cryptococcus neoformans var. neoformans: ATCC:32045, BCRC:20528, DBVPG:6010, IFO:0608, IGC:3957, NRRL:Y-2534, NRRL:Y-8347, UM:161
homotypic synonym:
Cryptococcus neoformans serotype D
Filobasidiella neoformans var. neoformans
NCBI BLAST name: basidiomycete fungi
Rank: varietas
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Other names:
heterotypic synonym
Cryptococcus deneoformans Hagen & Boekhout, 2015
holotype of Cryptococcus deneoformans: CBS:H:21965
culture from holotype of Cryptococcus deneoformans: CBS:6900, CBS:7697, B:3501, DBVPG:6228
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 89,737 75,914 4
Protein 28,608 763 -
Structure 2 - -
Genome 1 - -
Popset 61 61 -
GEO Datasets 266 176 -
PubMed Central 115 115 -
Gene 13,762 - -
SRA Experiments 878 681 -
Identical Protein Groups 10,789 340 -
BioProject 59 27 -
BioSample 765 678 -
Assembly 4 - -
PubChem BioAssay 74 12 -
Taxonomy 18 1 -

Notes:

Comments and References:

Diaz et al. 2000
Diaz, M.R., Boekhout, T., Theelen, B., and Fell, J.A. 2000. Molecular sequences analyses of the intergenic spacer (IGS) associated with rDNA of the two pathogenic varieties of the pathogenic yeast, Cryptococcus neoformans. System. Appl. Microbiol. 23: 535-545.
Boekhout et al. 2001
Boekhout, T. et al. 2001. Hybrid genotypes in the pathogenic yeast Cryptococcus neoformans. Microbiology 147: 891-907.
Kwon-Chung et al. (2017), doi:10.1128/mSphere.00357-16
Kwon-Chung K.J. et al. 2017. The Case for Adopting the “Species Complex” Nomenclature for the Etiologic Agents of Cryptococcosis. mSphere.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
2 records from this provider taxonomy/phylogenetic Index Fungorum
2 records from this provider taxonomy/phylogenetic MycoBank
Cryptococcus neoformans var. Neoformans taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
3 records from this provider organism-specific WebScipio - eukaryotic gene identification
5 records from provider organism-specific diArk - a resource for eukaryotic genome research
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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