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Taxonomy browser (Acidobacteriota)

Acidobacteriota

Taxonomy ID: 57723 (for references in articles please use NCBI:txid57723)
current name
Acidobacteriota corrig. Thrash and Coates 2021 in [Oren A & Garrity GM (2021)]
homotypic synonym:
"Acidobacteraeota" Oren et al. 2015, orth. var. in [Oren A et al. (2015)]
"Acidobacteriota" Whitman et al. 2018 in [Whitman WB et al. (2018)]
homotypic synonym:
"Acidobacteria" Thrash and Coates 2012
equivalent:
Acidobacteria
NCBI BLAST name: bacteria
Rank: phylum
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Acidobacterium group
in-part
Fibrobacter/Acidobacteria group
in-part
Fibrobacteres/Acidobacteria group
Lineage( full )
cellular organisms; Bacteria
   Entrez records   
Database name Subtree links Direct links
Nucleotide 286,605 6
Protein 1,903,336 3
Structure 49 -
Genome 257 -
Popset 995 917
Conserved Domains 11 4
GEO Datasets 31 2
PubMed Central 10,153 9,099
Gene 37,903 -
SRA Experiments 1,402 37
Protein Clusters 9,773 -
Identical Protein Groups 14,159,207 3
BioProject 469 2
BioSample 13,118 66
Assembly 7,234 -
Taxonomy 1,390 1

Comments and References:
Oren A & Garrity GM (2021), PubMed: abstract
Oren, A., and Garrity, G.M. "Valid publication of the names of forty-two phyla of prokaryotes." Int. J. Syst. Evol. Microbiol. (2021) 71(10):005056.
Oren A et al. (2015), PubMed: abstract
Oren, A., da Costa, M.S., Garrity, G.M., Rainey, F.A., Rosselló-Móra, R., Schink, B., Sutcliffe, I., Trujillo, M.E., and Whitman, W.B. "Proposal to include the rank of phylum in the International Code of Nomenclature of Prokaryotes." Int. J. Syst. Evol. Microbiol. (2015) 65(11):4284-4287.
Whitman WB et al. (2018), PubMed: abstract
Whitman, W.B., Oren, A., Chuvochina, M., da Costa, M.S., Garrity, G.M., Rainey, F.A., Rossello-Mora, R., Schink, B., Sutcliffe, I., Trujillo, M.E., and Ventura, S. "Proposal of the suffix -ota to denote phyla. Addendum to 'Proposal to include the rank of phylum in the International Code of Nomenclature of Prokaryotes'." Int. J. Syst. Evol. Microbiol. (2018) 68(3):967-969.
Thrash JC & Coates JD (2011)
Thrash, J.C., and Coates, J.D. "Phylum XVII. Acidobacteria phyl. nov." In: Bergey's Manual of Systematic Bacteriology, 2nd ed., vol. 4 (The Bacteroidetes, Spirochaetes, Tenericutes (Mollicutes), Acidobacteria, Fibrobacteres, Fusobacteria, Dictyglomi, Gemmatimonadetes, Lentisphaerae, Verrumicrobia, Chlamydiae, and Planctomycetes) (N.R. Krieg, J.T. Staley, D.R. Brown, B.P. Hedlund, B.J. Paster, N.L. Ward, W. Ludwig, and W.B. Whitman, eds.), Springer-Verlag, New York (2011). pp. 725-727. [No PubMed record available.]
VALIDATION LIST No. 143 (2012), doi:10.1099/ijs.0.039487-0
Validation List No. 143: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2012) 62:1-4. [Erratum: Int. J. Syst. Evol. Microbiol. (2012) 62:1016.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Acidobacteria taxonomy/phylogenetic Encyclopedia of life
44 records from this provider organism-specific Integrated Microbial Genomes
Acidobacteria taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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