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Taxonomy browser (Halalkalibacterium halodurans)

Halalkalibacterium halodurans

Taxonomy ID: 86665 (for references in articles please use NCBI:txid86665)
current name
Halalkalibacterium halodurans (Nielsen et al. 1995) Joshi et al. 2022 in [Validation List No. 203 (2022)]
homotypic synonym:
"Halalkalibacterium halodurans" (Nielsen et al. 1995) Joshi et al. 2021 in [Joshi A et al. (2021)]
basionym:
Bacillus halodurans (ex Boyer 1973) Nielsen et al. 1995 in [Validation List No. 55 (1995)]
type strain of Bacillus halodurans: ATCC:27557, CIP:105296, DSM:497, BCCM/LMG:7121, NRRL:B-3881, personal::PN-80
homotypic synonym:
"Bacillus alcalophilus subsp. halodurans" Boyer et al. 1973, effective name
homotypic synonym:
Alkalihalobacillus halodurans (Nielsen et al. 1995) Patel and Gupta 2020 in [Patel S & Gupta RS (2020)]
includes:
Bacillus sp. (STRAIN C-125)
Bacillus sp. (strain AH-101)
Bacillus sp. AH-101
Bacillus sp. C-125
Bacillus sp. MIR32
Bacillus sp. SDe12
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Alkalihalobacillus okuhidensis (Li et al. 2002) Patel and Gupta 2020 in [Patel S & Gupta RS (2020)]
basionym:
Bacillus okuhidensis Li et al. 2002
type strain of Bacillus okuhidensis: DSM:13666, JCM:10945, personal::GTC 854
includes:
Bacillus sp. GTC854
Bacillus sp. GTC855
equivalent:
Bacillus okuhidaensis
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Bacillales; Bacillaceae; Halalkalibacterium (ex Joshi et al. 2022)
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 4,663 4,290 386
Protein 30,418 24,937 -
Structure 260 107 -
Genome 1 1 -
Popset 19 19 -
GEO Datasets 16 16 -
PubMed Central 29 29 -
Gene 8,431 4,259 -
SRA Experiments 27 27 -
Protein Clusters 1,799 1,799 -
Identical Protein Groups 22,028 21,506 -
BioProject 12 11 -
BioSample 36 35 2
Assembly 22 21 -
Taxonomy 2 1 -

Comments and References:
Validation List No. 203 (2022), PubMed: abstract
Validation List No. 203. "Valid publication of new names and new combinations effectively published outside the IJSEM. Validation List no. 203." Int. J. Syst. Evol. Microbiol. (2022) 72(1):005167.
Joshi A et al. (2021), doi: 10.3389/fmicb.2021.722369, PubMed: abstract
Joshi, A., Thite, S., Karodi, P., Joseph, N., and Lodha, T. "Alkalihalobacterium elongatum gen. nov. sp. nov.: An antibiotic-producing bacterium isolated from Lonar Lake and reclassification of the genus Alkalihalobacillus into seven novel genera." Front. Microbiol. (2021) 12:722369.
Validation List No. 55 (1995)
VALIDATION LIST No. 55. Int. J. Syst. Bacteriol. (1995) 45(4):879-880.
Patel S & Gupta RS (2020), PubMed: abstract
Patel S, Gupta RS. "A phylogenomic and comparative genomic framework for resolving the polyphyly of the genus Bacillus: Proposal for six new genera of Bacillus species, Peribacillus gen. nov., Cytobacillus gen. nov., Mesobacillus gen. nov., Neobacillus gen. nov., Metabacillus gen. nov. and Alkalihalobacillus gen. nov." Int. J. Syst. Evol. Microbiol. (2020) 70(1):406-438.
Li Z et al. (2002)
Li, Z., Kawamura, Y., Shida, O., Yamagata, S., Deguchi, T., and Ezaki, T. "Bacillus okuhidensis sp. nov., isolated from Okuhida spa area of Japan." Int. J. Syst. Evol. Microbiol. (2002) 52:1205-1209.
Nielsen P et al. (1995), doi:10.1099/13500872-141-7-1745
Nielsen, P., Fritze, D., and Priest, E.G. "Phenetic diversity of alkaliphilic Bacillus strains: proposal for nine new species." Microbiology (1995) 141(7):1745-1761. [No PubMed record available.]
List of Changes in Taxonomic Opinion No. 36 (2022), doi:10.1099/ijsem.0.005413
Oren, A., and Garrity, G. "Notification of changes in taxonomic opinion previously published outside the IJSEM. List of changes in taxonomic opinion no. 36." Int. J. Syst. Evol. Microbiol. (2022) 72(7):005413.
Martinez MA et al. (2002)
Martinez, M.A., Delgado, O.D., Breccia, J.D., Baigori, M.D., Sineriz, F. "Revision of the taxonomic position of the xylanolytic Bacillus sp. MIR32 reidentified as Bacillus halodurans and plasmid-mediated transformation of B. halodurans." Extremophiles (2002) 6(5):391-395.
Takami H et al. (1999b)
Takami, H., Nogi, Y., Horikoshi, K. "Reidentification of the keratinase-producing facultatively alkaliphilic Bacillus sp. AH-101 as Bacillus halodurans." Extremophiles (1999) 3:293-296.
Boyer EE et al. (1973)
Boyer, E.E., Ingle, M.B., and Mercer, G.D. "Bacillus alcalophilus subsp. halodurans subsp. nov.: an alkaline amylase producing alkalophilic organism." Int. J. Syst. Bacteriol. (1973) 23:238-242. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Alkalihalobacillus halodurans meta-databases BacDive
Bacillus halodurans (ex Boyer 1973) Nielsen et al., 1995 taxonomy/phylogenetic Encyclopedia of life
Bacillus halodurans culture/stock collections Global Catalogue of Microorganisms
2 records from this provider organism-specific Integrated Microbial Genomes
Bacillus halodurans taxonomy/phylogenetic Lifemap
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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