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Taxonomy browser (Sus scrofa domesticus)

Sus scrofa domesticus

Taxonomy ID: 9825 (for references in articles please use NCBI:txid9825)
current name
Sus scrofa domesticus
homotypic synonym:
Sus domestica
Sus domesticus
Sus scrofa domestica
Genbank common name: domestic pig
NCBI BLAST name: even-toed ungulates & whales
Rank: subspecies
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus; Sus scrofa
   Entrez records   
Database name Direct links
Nucleotide 2,142
Protein 1,907
Structure 15
Genome 1
Popset 28
GEO Datasets 731
PubMed Central 1,907
Gene 13
SRA Experiments 7,710
Protein Clusters 13
Identical Protein Groups 1,444
BioProject 193
BioSample 7,487
Assembly 5
PubChem BioAssay 140
Taxonomy 1

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Sus scrofa domesticus taxonomy taxonomy/phylogenetic Arctos Specimen Database
Sus scrofa domestica taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0038431 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
WebScipio: Sus scrofa domestica organism-specific WebScipio - eukaryotic gene identification
15 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

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strain
Berkshire [3] CWH-19 [1] Duroc,Gettingen,Landrace,Large White,Meishan [1 1] German landrace [1 1]
Hampshire [1] Jinhua pig [3] Landrace [5] Largewhite [87 5 151]
Minnesota miniature swine [6 8] Moncai [3] Pietrain [1] Potbelly miniature pig [1]
Yontsuan pig [1] breed Duroc x German Landbreed, Du x DL3791 [1 1] gottingen [1 6 7 1 1 12]
variety
Duroc X Landrace Yorkshire breed Duroc X Landrace Yorkshire [1 1]
isolate
1 [4 1 2] 10 [1 1 1] 101112 [1 1] 11 [1 1 1]
123 [1 1] 131415 [1 1] 15 [1 1] 161718 [1 1]
17 [1 1 1] 192021 [1 1] 2 [3 1 2] 20 [1 1 1]
20121206-11 [1 1] 21 [1 1 1] 212223 [1 1] 23 [1 1 1]
242526 [1 1] 272829 [1 1] 28 [1 1 1] 29 [1 1 1]
3 [2 1] 303132 [1 1] 333 [1 1] 333435 [1 1]
35 [1 1 1] 363738 [1 1] 3713 [3 3] 39 [1 1 1]
394041 [1 1] 4 [1 1] 40 [1 1 1] 42 [1 1 1]
424344 [1 1] 45 [1 1 1] 454647 [1 1] 456 [1 1]
484950 [1 1] 5063-3 [3 5] 515253 [1 1] 545556 [1 1]
57 [1 1 1] 575859 [1 1] 59 [1 1 1] 606162 [1 1]
636465 [1 1] 64 [1 1 1] 65 [1 1 1] 66 [1 1 1]
666768 [1 1] 68 [1 1 1] 697071 [1 1] 71 [1 1 1]
76 [1 1 1] 78 [1 1 1] 789 [1 1] 83 [1 1 1]
85 [1 1 1] 91 [1 1 1] Agonda_Goan1 [1 1] Agonda_Goan2 [1 1]
Agonda_Goan3 [1 1] Agonda_Goan4 [1 1] Agonda_Goan5 [1 1] Agonda_Goan6 [1 1]
Assam_Local_Pig10 [1] Assam_Local_Pig2 [1] Assam_Local_Pig4 [1] Assam_Local_Pig5 [1]
Assam_Local_Pig7 [1] Assam_Local_Pig8 [1] Assam_Local_Pig9 [1] Assam_Local_pig6 [1]
B4T [1 1] BAG3402 [1 1] BAG3403 [1 1] BAG3409 [1 1]
BAG3414 [1 1] BAG3415 [1 1] BAG3417 [1 1] Banda1 [1 1]
Banda10 [1 1] Banda11 [1 1] Banda12 [1 1] Banda13 [1 1]
Banda14 [1 1] Banda15 [1 1] Banda2 [1 1] Banda3 [1 1]
Banda4 [1 1] Banda5 [1 1] Banda6 [1 1] Banda7 [1 1]
Banda8 [1 1] Banda9 [1 1] CAGallele [2 2 2] CDP1 [1]
CDP10 [1] CDP11 [1] CDP12 [1] CDP2 [1]
CDP3 [1] CDP4 [1] CDP5 [1] CDP6 [1]
CDP7 [1] CDP8 [1] CDP9 [1] CS01 [1]
CS02 [1] CS03 [1] CS04 [1] CS05 [1]
CWH_F1/79 [1 1] DP1 [1 1] DP10-12 [1 1] DP12 [1 1]
DP12-12 [1 1] DP13-12 [1 1] DP14-12 [1 1] DP16-12 [1 1]
DP17-12 [1 1] DP18-12 [1 1] DP19-12 [1 1] DP1_B1 [1 1]
DP20-12 [1 1] DP2_B1 [1 1] DP3 [1 1] DP3_B1 [1 1]
DP6-12 [1 1] DP7-12 [1 1] Domestic_Pig-74 [2 1] Domestic_Pig-87 [2 1]
Doom1 [1 1] Doom2 [2 1] Doom3 [1] Doom4 [1]
Doom5 [1] Doom6 [1] Doom_Pig1 [1 13] Duroc 1 [1 1]
Ex1055 [1 1] Ex1091 [1 1] Ex1092 [1 1] Ex1093 [1 1]
Ex1094 [1 1] Ex1096 [1 1] Ex1097 [1 1] Ex1098 [1 1]
ExPB006 [1 1] FRT115 [2 1] FRT116 [2 1] FRT117 [2 1]
FRT118 [2 1] Ghoongroo1 [1 1] Ghoongroo2 [1 1] Ghoongroo3 [1 1]
Ghoongroo4 [1 1] Ghungroo-3 [1 13] Ghungroo-4 [1 13] Ghungroo1 [1 13]
Ghungroo2 [1 13] H1 [3 2] H10 [1 1] H11 [1 1]
H12 [1 1] H13 [1 1] H14 [1 1] H15 [1 1]
H18 [1 1] H19 [1 1] H1_S1 [1 1] H1_normal [1 1]
H2 [1 1] H2_DSD [1 1] H2_S3 [1 1] H3 [1 1]
H3_DSD [1 1] H3_S12 [1 1] H4 [2 2] H4_S9 [1 1]
H5 [1 1] H6 [1 1] H7 [1 1] H8 [1 1]
H9 [1 1] HB1059 [1 1] HB1066 [1 1] HB1069 [1 1]
HBPB127 [1 1] HDK75_2 [1] HDK75_3 [1] HDK75_4 [1]
HDK75_5 [1] HDK75_6 [1] Hampshire.11 [1] JinHua.1203 [1]
JinHua.1204 [1] JinHua.1206 [1] KagoshimaBerk.4 [1] Kanagawa.L0702 [1]
Kanagawa.L0752 [1] Kanagawa.L0952 [1] Kanagawa.W0068 [1] L-1 [1]
L-2 [1] L-3 [1] L-4 [1] L-5 [1]
L-6 [1] L-7 [1] L-8 [1] L-9 [1]
Landrace.2 [1] Landrace.2214 [1] Large White 1 [1 1] LargeWhite.2219 [1]
LargeWhite.97 [1] LargeWhite.98 [1] LargeWhite.99 [1] Lumsniang1 [2 13]
Lumsniang2 [1] Lumsniang3 [1] Lumsniang4 [1] Lumsniang5 [1]
M4 [1] M7 [1] M9 [1] Mali2 [1]
Mali3 [1] Mali4 [1] Mali5 [1] Mali6 [1]
Mali7 [1] Manipur1 [1 1] Manipur2 [1 1] Manipur3 [1 1]
Manipur4 [1 1] Meishan 1 [1 1] Meishan.127 [1] Moncai.11 [1]
Moncai.3 [1] Moncai.8 [1] N1 [1 1] Niang Megha 1 [1 13]
Niang_Megha1 [1 1] Niang_Megha2 [2 1] Niang_Megha3 [2 1] Niang_Megha4 [2 1]
Niang_Megha5 [2 1] Niang_Megha6 [1] Ohmini miniature pig 208 [1 1] Okayama.B16 [1]
Okayama.D2 [1] Okayama.D588 [1] Okinawa native pig [1] P12PGABT [1]
Pietrain.8304 [1] Potbelly [1] Rani2 [1] Rani3 [1]
Rani4 [1] Rani5 [1] Rani6 [1] SC10 [1]
Sarcocystis miescheriana [1] Sarcocystis suihominis [1] Satsuma 28 [1 1] Satsuma 29 [1]
ShizuokaBerk.2307 [1] TTGallele [2 2 2] Tenyi_Vo6 [1] Tenyi_Vo_2 [1]
Tenyi_Vo_4 [1] Tenyi_Vo_5 [1] Tripura1 [1 1] Tripura2 [1 1]
Tripura3 [1 1] Tripura4 [1 1] Tripura5 [1 1] W-1 [1]
W-2 [1] W-6 [1] WF364 [1] WF365 [1]
WF366 [1] WF367 [1] WF368 [1] X4W [1 1]
Yucatan miniature pig [2 1] Z1 [1 1] ZD36 [1 1 1] Zovawk2 [1]
Zovawk3 [1] Zovawk4 [1] Zovawk5 [1] Zovawk6 [1]
specimen-voucher
AIWC 333 [1 1] AIWC 335 [1] AIWC 337 [1] CWFH_abt_1 [1 13]
DUR [1 1] H117-21 [1 1] H124-6 [1 1] H136-3 [1 1]
H288-7 [1 1] H405-5 [1 1] H45-1 [1 1] H51-1 [1 1]
HoN-4 [1 1] KAL [1 1] LDR [1 1] LWH [1 1]
MP_WP_F12/13_ab1 [1 1] PTR [1 1] QUE [1 1] R_2472 [2 2]
R_3744 [2 2] S10 [1]
authority
Sus scrofa domestica L. [1 1]
ecotype
Shanghai [1 1 1]
breed
Asha [1 13] Asha cross breed [6] Bama miniature pig [1 7 1 1] Berkshire [2]
Breitovskaya [6] Cheju [3] Chinese Jinhua pig [1 13] Danish Landrace [2 2]
Doom [6 13] Duroc [1 13 5 1 2 85] Duroc X Landrace Yorkshire [1 1] East Balkan [4 1]
F2 25 DUR x 25 PTR x 25 LDR x 25 LWH pig [1 1] Gannan wild Tibetan pig [1 13] Ghungroo [14 67] Gottingen Minipig [1 1]
HDK75 [6 13] Jinghua [1] Kalinga native [1 1] Landrace [3 361 6 1 5 601]
Large White [1 40 18 1 25 778] Large white x Landrace [498 1] Livenskaya [1] Lumsniang [7 13]
Ma shen [1 13] Mali [7 13] Mangalica [1 13] Meishan [1 1 24 2]
Min [1 13] Muromskaya [4] Nei jiang [1 13] Neijang [1]
Nero Casertano [2] Niang Megha [7 13] Niang Megha Pig [1] Ningxiang [1 10 20 100]
Non-descript_Assam_Local_Pig [1] Nondescript_Assam_Local_Pig [6] Pen zhou shan di [1 13] Pietrain [2 1 13]
Pot-Bellided [1 1 1] Putian [1] Quezon native [1 1] Rani [6 13]
Sarda [1] Tenyi Vo [6 13] Urjumskaya [3] Wanhua [1]
Welsh [1] Ya cha [1 13] Yorkshire [325 22 3 3 490] Yorkshire-Poland China [4 745 744]
Yucatan miniature pig [1] Zovawk [6 13] line 990 [2 2] prehistoric domestic [8 1]
bio-material
DNA [1 13]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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